Sed0020649 (gene) Chayote v1

Overview


Name	Sed0020649
Type	gene
Organism	Sechium edule (Chayote v1)
Description	AT-hook motif nuclear-localized protein
Location	LG08: 21961389 .. 21963236 (+)
RNA-Seq Expression	Sed0020649
Synteny	Sed0020649

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGATAACGGCGGAGCCATTTCAGTGTCCAAACAACCCCACGTTGGGCTCATCCTTCTCCAACCACAGCTCCCCAAACAAACCCCTCTCATCCTCCAGCAAGAAGCCACGTGGCCGGCCGCAGGGCTCCAAGAACAAACCAAAGCCAGCATGGTCATAACAAAACACAAGGACTCCTCCATGAATCCGGTCATGATCGATATCTCCACGAGATATGATGTCGTCGACTCCCTCCTCCACTTTGCACAAAAGCGACATGTCGGCCTGACCGTGCTCAGCGGCTCTGGCTCTGTCTCTAATGTTACGCCACGACATCCCATGTCGGCTTCCACTTCCATTTCCCTTCATGGACCTTTCAGCCTCCTTTCTCTGTCGGCCTGTTTTTCGCTCGATACTACGTCGTTTCACTCTTCGCCTTCCTCTTCTTTTGATATTTCCCTTGCTGGTCCTCATGGTCAGGTGAGCTTAGGGTTTATTTTCTTCTTTTTTTTTTCTAATTTAAATTCAGTTTATAGTATTATTACTTAGAATTTGTGTGAGGCCTTTGATGTAATCTCATAAATAATCACAATAACTTGATGAGTTCTTGATGATTATTTAGAAAGAGTTTTTTAAATTATAAGATTAAATCTTAAGCCAACAAAAATATCTCCATTAATTAAAATTATAGAGATTCAATTCTTATTTTCTCAATAGTATTAAAAATAAATTTAACATTTAACATTTTTTTCAAAAAAAAATATTTGTTTTGTTGCACGCTCGTCAACGCAAAACTCGAAACGTAATTTGTCTATAAAAAAAAAACTCGAAACCTAATTAAGAGGGTGTGACGCTATAGACGTTTAAATATAGAATCAAGTTTGACATTTTTCGCAAAATATTATAGCAAAAAGCAATTAAAAAGTTGGTAGTTTCGAATATAGTATCCTAATAATACTATATCAAATTAGAATAAAGCTAAACAATTTAGTTGTGTTTGATTACGATTTTCTTTATACTATTTATGCTTGTTCCCTTTAACGAATATTTTTAGTATATGATTAATTATTTCATTTCTTTTGAATATGTTTAAATGGTAGGTAAAAAAATTTTGAAGTACAAAAAAAAGTTAAAAAATCATTTTTCTACATTCCCCAAATTTTAGCTTTAGGTTTTGATGACATTAAACATTTTAGACTTGAGAGAACATCACTTTTAATTTTTTAAAATAAAATAGTTATCAAACAAGGTTAGCACTTATTTCCTTCAAATGATATAATTCTATTTATTTATAGGGAATTTACCATCAGCAGCACATTCTACCTCTTGTATTATATTTGCAGCAGAATTTTTAAAATAATTCATCTATAGCATATTTATTTCTATCACTCAAGTAGTGATATAACTCAATTTGAATTTCTATCACTCATAGAAAACTCAAGCAGTGATAGAATGAGTCTATCATTGATTGAATTCTATCACGAATAGAACTCAACAAGTGATAGAAGTTAATTTGGATTTTCTGCTATAAATGAATTATTTTTTATTTTGTGCTATAGATGGAAATATTTTACCATTTTTTGCTAACATGCAAAATCCCCTTATTTATATTCTTGACTAGATGTATGGAGGCATAGTTGGTGGGAAAGTTACTACAACAAGTCTCGTGGTAATCATTGTGGCGACATTTACAAACCTGCCTTCTATCGATTACCGAGCAAGGCACCGGAGGACAAGGATGTTGATATGGAAAAATCCGCCATCATCACTATTGAGGAATCCCCTGCGGTAGCAACGATAACAACCTCCGCGACTCCGTTGTCGATTTTATACGATACAATGTCATGGGGGCGAACTTCTTACTGA

mRNA sequence

ATGGCGGATAACGGCGGAGCCATTTCAGTGTCCAAACAACCCCACGTTGGGCTCATCCTTCTCCAACCACAGCTCCCCAAACAAACCCCTCTCATCCTCCAGCAAGAAGCCACGTGGCCGGCCGCAGGGCTCCAAGAACAAACCAAAGCCAGCATGGTCATAACAAAACACAAGGACTCCTCCATGAATCCGGTCATGATCGATATCTCCACGAGATATGATGTCGTCGACTCCCTCCTCCACTTTGCACAAAAGCGACATGTCGGCCTGACCGTGCTCAGCGGCTCTGGCTCTGTCTCTAATGTTACGCCACGACATCCCATGTCGGCTTCCACTTCCATTTCCCTTCATGGACCTTTCAGCCTCCTTTCTCTGTCGGCCTGTTTTTCGCTCGATACTACGTCGTTTCACTCTTCGCCTTCCTCTTCTTTTGATATTTCCCTTGCTGGTCCTCATGGTCAGATGTATGGAGGCATAGTTGGTGGGAAAGTTACTACAACAAGTCTCGTGGTAATCATTGCACCGGAGGACAAGGATGTTGATATGGAAAAATCCGCCATCATCACTATTGAGGAATCCCCTGCGGTAGCAACGATAACAACCTCCGCGACTCCGTTGTCGATTTTATACGATACAATGTCATGGGGGCGAACTTCTTACTGA

Coding sequence (CDS)

ATGGCGGATAACGGCGGAGCCATTTCAGTGTCCAAACAACCCCACGTTGGGCTCATCCTTCTCCAACCACAGCTCCCCAAACAAACCCCTCTCATCCTCCAGCAAGAAGCCACGTGGCCGGCCGCAGGGCTCCAAGAACAAACCAAAGCCAGCATGGTCATAACAAAACACAAGGACTCCTCCATGAATCCGGTCATGATCGATATCTCCACGAGATATGATGTCGTCGACTCCCTCCTCCACTTTGCACAAAAGCGACATGTCGGCCTGACCGTGCTCAGCGGCTCTGGCTCTGTCTCTAATGTTACGCCACGACATCCCATGTCGGCTTCCACTTCCATTTCCCTTCATGGACCTTTCAGCCTCCTTTCTCTGTCGGCCTGTTTTTCGCTCGATACTACGTCGTTTCACTCTTCGCCTTCCTCTTCTTTTGATATTTCCCTTGCTGGTCCTCATGGTCAGATGTATGGAGGCATAGTTGGTGGGAAAGTTACTACAACAAGTCTCGTGGTAATCATTGCACCGGAGGACAAGGATGTTGATATGGAAAAATCCGCCATCATCACTATTGAGGAATCCCCTGCGGTAGCAACGATAACAACCTCCGCGACTCCGTTGTCGATTTTATACGATACAATGTCATGGGGGCGAACTTCTTACTGA

Protein sequence

MADNGGAISVSKQPHVGLILLQPQLPKQTPLILQQEATWPAAGLQEQTKASMVITKHKDSSMNPVMIDISTRYDVVDSLLHFAQKRHVGLTVLSGSGSVSNVTPRHPMSASTSISLHGPFSLLSLSACFSLDTTSFHSSPSSSFDISLAGPHGQMYGGIVGGKVTTTSLVVIIAPEDKDVDMEKSAIITIEESPAVATITTSATPLSILYDTMSWGRTSY

Homology

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BLAST of Sed0020649 vs. NCBI nr
Match: XP_008450342.1 (PREDICTED: AT-hook motif nuclear-localized protein 28-like [Cucumis melo] >KAA0055995.1 AT-hook motif nuclear-localized protein 28-like [Cucumis melo var. makuwa] >TYK27685.1 AT-hook motif nuclear-localized protein 28-like [Cucumis melo var. makuwa])

HSP 1 Score: 187.6 bits (475), Expect = 1.2e-43
Identity = 123/253 (48.62%), Postives = 152/253 (60.08%), Query Frame = 0


Query: 1   MADNGGAISVSKQPHVGLIL-------LQPQL-PKQTPL---------ILQQEATWPAAG 60
           MAD GGAIS+S QP              +PQ  P +TP+            ++      G
Sbjct: 1   MADYGGAISLSHQPPTSSSSSDDHSPPTRPQTKPNKTPISGAASSADTSTMKKPRGRPPG 60

Query: 61  LQEQTKASMVITKHKDSSMNPVMIDISTRYDVVDSLLHFAQKRHVGLTVLSGSGSVSNVT 120
            + + K  +VITK  +SSM PV+I+IS   DVVD+LLHFA+KRHVGLTVLSGSGSVSNVT
Sbjct: 61  SKNKPKPPIVITKENESSMKPVVIEISAGNDVVDTLLHFARKRHVGLTVLSGSGSVSNVT 120

Query: 121 PRHPMSASTSISLHGPFSLLSLSACFSLDTTSFHS-----------SPSSSFDISLAGPH 180
            RHPMS STS+SLHGPFSL+SLS  F  +TT F S           SPSSSF I LAG  
Sbjct: 121 LRHPMSHSTSLSLHGPFSLVSLSGSFLANTTPFSSKPHSLSPSPSPSPSSSFGICLAGAQ 180

Query: 181 GQMYGGIVGGKVTTTSLVVII-----------------APEDKDVDMEKSAIITIEESPA 209
           GQ++GGIVGGKVT  SLVV++                 A +D+ +DM K  I   +ESP 
Sbjct: 181 GQVFGGIVGGKVTAASLVVVVAATFINPVFHRLPSETAAEDDEGIDMAKPTINATDESPV 240

[Close]

BLAST of Sed0020649 vs. NCBI nr
Match: XP_004139130.1 (AT-hook motif nuclear-localized protein 17 [Cucumis sativus] >KGN66545.1 hypothetical protein Csa_006864 [Cucumis sativus])

HSP 1 Score: 186.4 bits (472), Expect = 2.6e-43
Identity = 125/254 (49.21%), Postives = 150/254 (59.06%), Query Frame = 0


Query: 1   MADNGGAISVSKQPHVGLIL-------LQPQL-PKQTP----------LILQQEATWPAA 60
           MAD GGAIS+S QP              +PQ  P +TP              ++      
Sbjct: 1   MADYGGAISLSHQPPTSSSSSDDHSPPTRPQTKPSRTPTSGGAASSVDTSTMKKPRGRPP 60

Query: 61  GLQEQTKASMVITKHKDSSMNPVMIDISTRYDVVDSLLHFAQKRHVGLTVLSGSGSVSNV 120
           G + + K  +VITK  +SSM PV+I+IS   DVVD+LLHFA+KRHVGLTVLSGSGSVSNV
Sbjct: 61  GSKNKPKPPIVITKENESSMKPVVIEISAGNDVVDTLLHFARKRHVGLTVLSGSGSVSNV 120

Query: 121 TPRHPMSASTSISLHGPFSLLSLSACFSLDTTSFHS-----------SPSSSFDISLAGP 180
           T RHPMS STS+SLHGPFSL+SLS  F  +TT F S           SPSSSF I LAG 
Sbjct: 121 TLRHPMSHSTSLSLHGPFSLVSLSGSFLANTTPFSSKPHSLSPSPSPSPSSSFGICLAGA 180

Query: 181 HGQMYGGIVGGKVTTTSLVVIIAP-----------------EDKDVDMEKSAIITIEESP 209
            GQ++GGIVGGKVT  SLVV++A                  ED  VDM K  I   +ESP
Sbjct: 181 QGQVFGGIVGGKVTAASLVVVVAATFINPVFHRLPSETTEGEDDRVDMAKPTINATDESP 240

[Close]

BLAST of Sed0020649 vs. NCBI nr
Match: XP_038880172.1 (AT-hook motif nuclear-localized protein 17-like [Benincasa hispida])

HSP 1 Score: 183.3 bits (464), Expect = 2.2e-42
Identity = 125/255 (49.02%), Postives = 156/255 (61.18%), Query Frame = 0


Query: 1   MADNGGAISVSKQPHVGLILLQPQLP-------KQTPLILQQEAT-----WPAAGLQEQT 60
           MAD GGAIS+S QP           P        +TP+     ++         G + + 
Sbjct: 1   MADYGGAISLSHQPPTSSSSSSDHNPPTTTRPKPKTPMSSTDNSSIKKPRGRPPGSKNKP 60

Query: 61  KASMVITKHKDSSMNPVMIDISTRYDVVDSLLHFAQKRHVGLTVLSGSGSVSNVTPRHPM 120
           K  +VITK  +SSM PV+I+IS   DVVD+LL+FA+KRHVGLTVLSGSGSVSNVT RHPM
Sbjct: 61  KPPIVITKENESSMKPVVIEISAGNDVVDTLLNFARKRHVGLTVLSGSGSVSNVTLRHPM 120

Query: 121 SASTSISLHGPFSLLSLSACFSLDTTSFHSSP---SSSFDISLAGPHGQMYGGIVGGKVT 180
           S ST++SLHGPFSL+SLS  F  +TT F S P   SSSF I LAG  GQ++GGIVGGKVT
Sbjct: 121 SHSTNLSLHGPFSLVSLSGSFLANTTPFSSKPLSSSSSFGICLAGAQGQVFGGIVGGKVT 180

Query: 181 TTSLVVIIA-----------PEDKDVDME--KSAIITIEESPAVATITTSATPLSI-LYD 220
             SLVV++A           P +   D E  K AI T +ESP  AT T+SATP+++ +Y+
Sbjct: 181 AASLVVVVAATFINPVFHRLPSETAEDDEGAKPAINTTDESPVAATTTSSATPMAVCIYN 240

[Close]

BLAST of Sed0020649 vs. NCBI nr
Match: KAG7023829.1 (AT-hook motif nuclear-localized protein 17, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 168.7 bits (426), Expect = 5.6e-38
Identity = 102/189 (53.97%), Postives = 126/189 (66.67%), Query Frame = 0


Query: 1   MADNGGAISVSKQP--------------HVGLILLQPQ-LPKQTPLILQQEATWPAAGLQ 60
           MAD GGAIS+S QP              H  L   +P+ L   +   + ++      G +
Sbjct: 1   MADYGGAISLSHQPLTSSSSSSSSSSSDHRPLSAAKPKNLLSSSVETVGKKPRGRPPGSK 60

Query: 61  EQTKASMVITKHKDSSMNPVMIDISTRYDVVDSLLHFAQKRHVGLTVLSGSGSVSNVTPR 120
            + K  +VITK  +S+M PV+I+IS   DVV+SLLHFA+KRHVG T+LSGSGSVSNVT R
Sbjct: 61  NKPKPPIVITKENESAMKPVVIEISAGNDVVESLLHFARKRHVGFTILSGSGSVSNVTLR 120

Query: 121 HPMSASTSISLHGPFSLLSLSACFSLDTTSFHSSPSSSFDISLAGPHGQMYGGIVGGKVT 175
           HPMS STS+SLHGPFSL+SLS  F  +TT F S  SSSF I LAG  GQ++GGIVGGKVT
Sbjct: 121 HPMSHSTSLSLHGPFSLVSLSGSFLGNTTPFSSPSSSSFGICLAGAQGQVFGGIVGGKVT 180

[Close]

BLAST of Sed0020649 vs. NCBI nr
Match: KAG6590167.1 (AT-hook motif nuclear-localized protein 17, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 168.7 bits (426), Expect = 5.6e-38
Identity = 102/189 (53.97%), Postives = 126/189 (66.67%), Query Frame = 0


Query: 1   MADNGGAISVSKQP--------------HVGLILLQPQ-LPKQTPLILQQEATWPAAGLQ 60
           MAD GGAIS+S QP              H  L   +P+ L   +   + ++      G +
Sbjct: 1   MADYGGAISLSHQPLTSSSSSSSSSSSDHRPLSAAKPKNLLSSSVETVGKKPRGRPPGSK 60

Query: 61  EQTKASMVITKHKDSSMNPVMIDISTRYDVVDSLLHFAQKRHVGLTVLSGSGSVSNVTPR 120
            + K  +VITK  +S+M PV+I+IS   DVV+SLLHFA+KRHVG T+LSGSGSVSNVT R
Sbjct: 61  NKPKPPIVITKENESAMKPVVIEISAGNDVVESLLHFARKRHVGFTILSGSGSVSNVTLR 120

Query: 121 HPMSASTSISLHGPFSLLSLSACFSLDTTSFHSSPSSSFDISLAGPHGQMYGGIVGGKVT 175
           HPMS STS+SLHGPFSL+SLS  F  +TT F S  SSSF I LAG  GQ++GGIVGGKVT
Sbjct: 121 HPMSHSTSLSLHGPFSLVSLSGSFLGNTTPFSSPSSSSFGICLAGAQGQVFGGIVGGKVT 180

[Close]

BLAST of Sed0020649 vs. ExPASy Swiss-Prot
Match: Q9LTA2 (AT-hook motif nuclear-localized protein 17 OS=Arabidopsis thaliana OX=3702 GN=AHL17 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.5e-17
Identity = 53/136 (38.97%), Postives = 84/136 (61.76%), Query Frame = 0


Query: 43  GLQEQTKASMVITKHKDSSMNPVMIDISTRYDVVDSLLHFAQKRHVGLTVLSGSGSVSNV 102
           G + + K  + +T+  D  M+P ++++ +  DVV+++  F +++ +G+ VLSGSGSV+NV
Sbjct: 64  GSKNKPKPPVFVTRDTDPPMSPYILEVPSGNDVVEAINRFCRRKSIGVCVLSGSGSVANV 123

Query: 103 TPRHPMSAS--TSISLHGPFSLLSLSACF--SLDTTSFHSSPSSSFDISLAGPHGQMYGG 162
           T R P  A+  ++I+ HG F LLS+SA F      TS     S+ F +SLAGP GQ+ GG
Sbjct: 124 TLRQPSPAALGSTITFHGKFDLLSVSATFLPPPPRTSLSPPVSNFFTVSLAGPQGQIIGG 183

Query: 163 IVGGKVTTTSLVVIIA 175
            V G + +   V +IA
Sbjct: 184 FVAGPLISAGTVYVIA 199

[Close]

BLAST of Sed0020649 vs. ExPASy Swiss-Prot
Match: Q9M9R4 (AT-hook motif nuclear-localized protein 28 OS=Arabidopsis thaliana OX=3702 GN=AHL28 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.4e-15
Identity = 54/141 (38.30%), Postives = 83/141 (58.87%), Query Frame = 0


Query: 43  GLQEQTKASMVITKHKDSSMNPVMIDISTRYDVVDSLLHFAQKRHVGLTVLSGSGSVSNV 102
           G + + KA + +T   D  M+P ++++ +  DVV++L  F + + +G  VLSGSGSV++V
Sbjct: 13  GSKNKPKAPIFVT--IDPPMSPYILEVPSGNDVVEALNRFCRGKAIGFCVLSGSGSVADV 72

Query: 103 TPRHPMSAS--TSISLHGPFSLLSLSACF--SLDTTSFHSSPSSSFDISLAGPHGQMYGG 162
           T R P  A+  ++I+ HG F LLS+SA F   L  TS     S+ F +SLAGP G++ GG
Sbjct: 73  TLRQPSPAAPGSTITFHGKFDLLSVSATFLPPLPPTSLSPPVSNFFTVSLAGPQGKVIGG 132

Query: 163 IVGGKVTTTSLVVIIAPEDKD 180
            V G +     V  +A   K+
Sbjct: 133 FVAGPLVAAGTVYFVATSFKN 151

[Close]

BLAST of Sed0020649 vs. ExPASy Swiss-Prot
Match: Q9M2S3 (AT-hook motif nuclear-localized protein 15 OS=Arabidopsis thaliana OX=3702 GN=AHL15 PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 6.9e-15
Identity = 50/132 (37.88%), Postives = 81/132 (61.36%), Query Frame = 0


Query: 43  GLQEQTKASMVITKHKDSSMNPVMIDISTRYDVVDSLLHFAQKRHVGLTVLSGSGSVSNV 102
           G + + K+ +V+TK   +S+   +++I+T  DV +SL  FA++R  G++VLSGSG V+NV
Sbjct: 96  GSKNKPKSPVVVTKESPNSLQSHVLEIATGADVAESLNAFARRRGRGVSVLSGSGLVTNV 155

Query: 103 TPRHPMSASTSISLHGPFSLLSLSACFSLDTTSFHSSPSSSFDISLAGPHGQMYGGIVGG 162
           T R P ++   +SL G F +LS+  C +   TS   + ++   I LAG  GQ+ GG V G
Sbjct: 156 TLRQPAASGGVVSLRGQFEILSM--CGAFLPTSGSPAAAAGLTIYLAGAQGQVVGGGVAG 215

Query: 163 KVTTTSLVVIIA 175
            +  +  V++IA
Sbjct: 216 PLIASGPVIVIA 225

[Close]

BLAST of Sed0020649 vs. ExPASy Swiss-Prot
Match: O23620 (AT-hook motif nuclear-localized protein 23 OS=Arabidopsis thaliana OX=3702 GN=AHL23 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.9e-13
Identity = 47/142 (33.10%), Postives = 81/142 (57.04%), Query Frame = 0


Query: 43  GLQEQTKASMVITKHKDSSMNPVMIDISTRYDVVDSLLHFAQKRHVGLTVLSGSGSVSNV 102
           G + + K  ++IT+   +++   +++++   DV D +  +A++R  G+ VLSGSG+V+NV
Sbjct: 90  GSKNKPKPPVIITRESANTLRAHILEVTNGCDVFDCVATYARRRQRGICVLSGSGTVTNV 149

Query: 103 TPRHPMSASTSISLHGPFSLLSLSACFSLDTTSFHSSPSSSFDISLAGPHGQMYGGIVGG 162
           + R P +A   ++L G F +LSLS  F           ++S  I LAG  GQ+ GG V G
Sbjct: 150 SIRQPSAAGAVVTLQGTFEILSLSGSFLPPPA---PPGATSLTIFLAGGQGQVVGGSVVG 209

Query: 163 KVTTTSLVVIIAPEDKDVDMEK 185
           ++T    V++IA    +V  E+
Sbjct: 210 ELTAAGPVIVIAASFTNVAYER 228

[Close]

BLAST of Sed0020649 vs. ExPASy Swiss-Prot
Match: Q9LZX7 (AT-hook motif nuclear-localized protein 18 OS=Arabidopsis thaliana OX=3702 GN=AHL18 PE=2 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 5.0e-13
Identity = 52/152 (34.21%), Postives = 86/152 (56.58%), Query Frame = 0


Query: 42  AGLQEQTKASMVITKHKDSSMNPVMIDISTRYDVVDSLLHFAQKRHVGLTVLSGSGSVSN 101
           AG + + KA +++T+   ++    +++I+   DV++SL  FA++R  G+ VL+G+G+V+N
Sbjct: 66  AGSKNKPKAPIIVTRDSANAFRCHVMEITNACDVMESLAVFARRRQRGVCVLTGNGAVTN 125

Query: 102 VTPRHPMSASTSISLHGPFSLLSLSACFSLDTTSFHSSPSSSFDISLAGPHGQMYGGIVG 161
           VT R P      +SLHG F +LSLS  F           +S   + LAG  GQ+ GG V 
Sbjct: 126 VTVRQP--GGGVVSLHGRFEILSLSGSFLPPPA---PPAASGLKVYLAGGQGQVIGGSVV 185

Query: 162 GKVTTTSLVVIIAPEDKDVDMEKSAIITIEES 194
           G +T +S VV++A    +   E+  +   EE+
Sbjct: 186 GPLTASSPVVVMAASFGNASYERLPLEEEEET 212

[Close]

BLAST of Sed0020649 vs. ExPASy TrEMBL
Match: A0A5A7UQT7 (AT-hook motif nuclear-localized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold225G00140 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 5.7e-44
Identity = 123/253 (48.62%), Postives = 152/253 (60.08%), Query Frame = 0


Query: 1   MADNGGAISVSKQPHVGLIL-------LQPQL-PKQTPL---------ILQQEATWPAAG 60
           MAD GGAIS+S QP              +PQ  P +TP+            ++      G
Sbjct: 1   MADYGGAISLSHQPPTSSSSSDDHSPPTRPQTKPNKTPISGAASSADTSTMKKPRGRPPG 60

Query: 61  LQEQTKASMVITKHKDSSMNPVMIDISTRYDVVDSLLHFAQKRHVGLTVLSGSGSVSNVT 120
            + + K  +VITK  +SSM PV+I+IS   DVVD+LLHFA+KRHVGLTVLSGSGSVSNVT
Sbjct: 61  SKNKPKPPIVITKENESSMKPVVIEISAGNDVVDTLLHFARKRHVGLTVLSGSGSVSNVT 120

Query: 121 PRHPMSASTSISLHGPFSLLSLSACFSLDTTSFHS-----------SPSSSFDISLAGPH 180
            RHPMS STS+SLHGPFSL+SLS  F  +TT F S           SPSSSF I LAG  
Sbjct: 121 LRHPMSHSTSLSLHGPFSLVSLSGSFLANTTPFSSKPHSLSPSPSPSPSSSFGICLAGAQ 180

Query: 181 GQMYGGIVGGKVTTTSLVVII-----------------APEDKDVDMEKSAIITIEESPA 209
           GQ++GGIVGGKVT  SLVV++                 A +D+ +DM K  I   +ESP 
Sbjct: 181 GQVFGGIVGGKVTAASLVVVVAATFINPVFHRLPSETAAEDDEGIDMAKPTINATDESPV 240

[Close]

BLAST of Sed0020649 vs. ExPASy TrEMBL
Match: A0A1S3BP06 (AT-hook motif nuclear-localized protein OS=Cucumis melo OX=3656 GN=LOC103491979 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 5.7e-44
Identity = 123/253 (48.62%), Postives = 152/253 (60.08%), Query Frame = 0


Query: 1   MADNGGAISVSKQPHVGLIL-------LQPQL-PKQTPL---------ILQQEATWPAAG 60
           MAD GGAIS+S QP              +PQ  P +TP+            ++      G
Sbjct: 1   MADYGGAISLSHQPPTSSSSSDDHSPPTRPQTKPNKTPISGAASSADTSTMKKPRGRPPG 60

Query: 61  LQEQTKASMVITKHKDSSMNPVMIDISTRYDVVDSLLHFAQKRHVGLTVLSGSGSVSNVT 120
            + + K  +VITK  +SSM PV+I+IS   DVVD+LLHFA+KRHVGLTVLSGSGSVSNVT
Sbjct: 61  SKNKPKPPIVITKENESSMKPVVIEISAGNDVVDTLLHFARKRHVGLTVLSGSGSVSNVT 120

Query: 121 PRHPMSASTSISLHGPFSLLSLSACFSLDTTSFHS-----------SPSSSFDISLAGPH 180
            RHPMS STS+SLHGPFSL+SLS  F  +TT F S           SPSSSF I LAG  
Sbjct: 121 LRHPMSHSTSLSLHGPFSLVSLSGSFLANTTPFSSKPHSLSPSPSPSPSSSFGICLAGAQ 180

Query: 181 GQMYGGIVGGKVTTTSLVVII-----------------APEDKDVDMEKSAIITIEESPA 209
           GQ++GGIVGGKVT  SLVV++                 A +D+ +DM K  I   +ESP 
Sbjct: 181 GQVFGGIVGGKVTAASLVVVVAATFINPVFHRLPSETAAEDDEGIDMAKPTINATDESPV 240

[Close]

BLAST of Sed0020649 vs. ExPASy TrEMBL
Match: A0A0A0LXI2 (AT-hook motif nuclear-localized protein OS=Cucumis sativus OX=3659 GN=Csa_1G629020 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 1.3e-43
Identity = 125/254 (49.21%), Postives = 150/254 (59.06%), Query Frame = 0


Query: 1   MADNGGAISVSKQPHVGLIL-------LQPQL-PKQTP----------LILQQEATWPAA 60
           MAD GGAIS+S QP              +PQ  P +TP              ++      
Sbjct: 1   MADYGGAISLSHQPPTSSSSSDDHSPPTRPQTKPSRTPTSGGAASSVDTSTMKKPRGRPP 60

Query: 61  GLQEQTKASMVITKHKDSSMNPVMIDISTRYDVVDSLLHFAQKRHVGLTVLSGSGSVSNV 120
           G + + K  +VITK  +SSM PV+I+IS   DVVD+LLHFA+KRHVGLTVLSGSGSVSNV
Sbjct: 61  GSKNKPKPPIVITKENESSMKPVVIEISAGNDVVDTLLHFARKRHVGLTVLSGSGSVSNV 120

Query: 121 TPRHPMSASTSISLHGPFSLLSLSACFSLDTTSFHS-----------SPSSSFDISLAGP 180
           T RHPMS STS+SLHGPFSL+SLS  F  +TT F S           SPSSSF I LAG 
Sbjct: 121 TLRHPMSHSTSLSLHGPFSLVSLSGSFLANTTPFSSKPHSLSPSPSPSPSSSFGICLAGA 180

Query: 181 HGQMYGGIVGGKVTTTSLVVIIAP-----------------EDKDVDMEKSAIITIEESP 209
            GQ++GGIVGGKVT  SLVV++A                  ED  VDM K  I   +ESP
Sbjct: 181 QGQVFGGIVGGKVTAASLVVVVAATFINPVFHRLPSETTEGEDDRVDMAKPTINATDESP 240

[Close]

BLAST of Sed0020649 vs. ExPASy TrEMBL
Match: A0A6J1H9C1 (AT-hook motif nuclear-localized protein OS=Cucurbita moschata OX=3662 GN=LOC111461734 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 1.3e-37
Identity = 101/189 (53.44%), Postives = 125/189 (66.14%), Query Frame = 0


Query: 1   MADNGGAISVSKQP--------------HVGLILLQPQ-LPKQTPLILQQEATWPAAGLQ 60
           MAD GGAIS+S QP              H  L   +P+ L   +   + ++      G +
Sbjct: 1   MADYGGAISLSHQPLTSSSSSSSSSSSDHRPLSAAKPKNLLSSSAETVGKKPRGRPPGSK 60

Query: 61  EQTKASMVITKHKDSSMNPVMIDISTRYDVVDSLLHFAQKRHVGLTVLSGSGSVSNVTPR 120
            + K  +VITK  +S+M PV+I+IS   DVV+SLLHFA+ RHVG T+LSGSGSVSNVT R
Sbjct: 61  NKPKPPIVITKENESAMKPVVIEISAGNDVVESLLHFARNRHVGFTILSGSGSVSNVTLR 120

Query: 121 HPMSASTSISLHGPFSLLSLSACFSLDTTSFHSSPSSSFDISLAGPHGQMYGGIVGGKVT 175
           HPMS STS+SLHGPFSL+SLS  F  +TT F S  SSSF I LAG  GQ++GGIVGGKVT
Sbjct: 121 HPMSHSTSLSLHGPFSLVSLSGSFLGNTTPFCSPSSSSFGICLAGAQGQVFGGIVGGKVT 180

[Close]

BLAST of Sed0020649 vs. ExPASy TrEMBL
Match: A0A6J1JLJ2 (AT-hook motif nuclear-localized protein OS=Cucurbita maxima OX=3661 GN=LOC111485503 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 6.7e-37
Identity = 102/192 (53.12%), Postives = 126/192 (65.62%), Query Frame = 0


Query: 1   MADNGGAISVSKQP----------------HVGLILLQPQ--LPKQTPLILQQEATWPAA 60
           MAD GGAIS+S+QP                H  L   +P+  L   T  + ++    P  
Sbjct: 1   MADYGGAISLSQQPLTSDSSSSSSSSSSSDHRPLSAAKPKNLLSSSTETVGKKPRGRP-P 60

Query: 61  GLQEQTKASMVITKHKDSSMNPVMIDISTRYDVVDSLLHFAQKRHVGLTVLSGSGSVSNV 120
           G + + K  +VITK  +S+M PV+I+IS   DVV+SLL FA+ RHVG T+LSGSGSVSNV
Sbjct: 61  GSKNKPKPPIVITKENESAMKPVVIEISAGNDVVESLLQFARIRHVGFTILSGSGSVSNV 120

Query: 121 TPRHPMSASTSISLHGPFSLLSLSACFSLDTTSFHSSPSSSFDISLAGPHGQMYGGIVGG 175
           T RHPMS STS+SLHGPFSL+SLS  F  +TT F S  SSSF I LAG  GQ++GGIVGG
Sbjct: 121 TLRHPMSHSTSLSLHGPFSLVSLSGSFLGNTTPFSSPSSSSFGICLAGAQGQVFGGIVGG 180

[Close]

BLAST of Sed0020649 vs. TAIR 10
Match: AT5G49700.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 91.3 bits (225), Expect = 1.1e-18
Identity = 53/136 (38.97%), Postives = 84/136 (61.76%), Query Frame = 0


Query: 43  GLQEQTKASMVITKHKDSSMNPVMIDISTRYDVVDSLLHFAQKRHVGLTVLSGSGSVSNV 102
           G + + K  + +T+  D  M+P ++++ +  DVV+++  F +++ +G+ VLSGSGSV+NV
Sbjct: 64  GSKNKPKPPVFVTRDTDPPMSPYILEVPSGNDVVEAINRFCRRKSIGVCVLSGSGSVANV 123

Query: 103 TPRHPMSAS--TSISLHGPFSLLSLSACF--SLDTTSFHSSPSSSFDISLAGPHGQMYGG 162
           T R P  A+  ++I+ HG F LLS+SA F      TS     S+ F +SLAGP GQ+ GG
Sbjct: 124 TLRQPSPAALGSTITFHGKFDLLSVSATFLPPPPRTSLSPPVSNFFTVSLAGPQGQIIGG 183

Query: 163 IVGGKVTTTSLVVIIA 175
            V G + +   V +IA
Sbjct: 184 FVAGPLISAGTVYVIA 199

[Close]

BLAST of Sed0020649 vs. TAIR 10
Match: AT1G14490.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 84.0 bits (206), Expect = 1.7e-16
Identity = 54/141 (38.30%), Postives = 83/141 (58.87%), Query Frame = 0


Query: 43  GLQEQTKASMVITKHKDSSMNPVMIDISTRYDVVDSLLHFAQKRHVGLTVLSGSGSVSNV 102
           G + + KA + +T   D  M+P ++++ +  DVV++L  F + + +G  VLSGSGSV++V
Sbjct: 13  GSKNKPKAPIFVT--IDPPMSPYILEVPSGNDVVEALNRFCRGKAIGFCVLSGSGSVADV 72

Query: 103 TPRHPMSAS--TSISLHGPFSLLSLSACF--SLDTTSFHSSPSSSFDISLAGPHGQMYGG 162
           T R P  A+  ++I+ HG F LLS+SA F   L  TS     S+ F +SLAGP G++ GG
Sbjct: 73  TLRQPSPAAPGSTITFHGKFDLLSVSATFLPPLPPTSLSPPVSNFFTVSLAGPQGKVIGG 132

Query: 163 IVGGKVTTTSLVVIIAPEDKD 180
            V G +     V  +A   K+
Sbjct: 133 FVAGPLVAAGTVYFVATSFKN 151

[Close]

BLAST of Sed0020649 vs. TAIR 10
Match: AT3G55560.1 (AT-hook protein of GA feedback 2 )

HSP 1 Score: 82.4 bits (202), Expect = 4.9e-16
Identity = 50/132 (37.88%), Postives = 81/132 (61.36%), Query Frame = 0


Query: 43  GLQEQTKASMVITKHKDSSMNPVMIDISTRYDVVDSLLHFAQKRHVGLTVLSGSGSVSNV 102
           G + + K+ +V+TK   +S+   +++I+T  DV +SL  FA++R  G++VLSGSG V+NV
Sbjct: 96  GSKNKPKSPVVVTKESPNSLQSHVLEIATGADVAESLNAFARRRGRGVSVLSGSGLVTNV 155

Query: 103 TPRHPMSASTSISLHGPFSLLSLSACFSLDTTSFHSSPSSSFDISLAGPHGQMYGGIVGG 162
           T R P ++   +SL G F +LS+  C +   TS   + ++   I LAG  GQ+ GG V G
Sbjct: 156 TLRQPAASGGVVSLRGQFEILSM--CGAFLPTSGSPAAAAGLTIYLAGAQGQVVGGGVAG 215

Query: 163 KVTTTSLVVIIA 175
            +  +  V++IA
Sbjct: 216 PLIASGPVIVIA 225

[Close]

BLAST of Sed0020649 vs. TAIR 10
Match: AT4G17800.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 77.0 bits (188), Expect = 2.1e-14
Identity = 47/142 (33.10%), Postives = 81/142 (57.04%), Query Frame = 0


Query: 43  GLQEQTKASMVITKHKDSSMNPVMIDISTRYDVVDSLLHFAQKRHVGLTVLSGSGSVSNV 102
           G + + K  ++IT+   +++   +++++   DV D +  +A++R  G+ VLSGSG+V+NV
Sbjct: 90  GSKNKPKPPVIITRESANTLRAHILEVTNGCDVFDCVATYARRRQRGICVLSGSGTVTNV 149

Query: 103 TPRHPMSASTSISLHGPFSLLSLSACFSLDTTSFHSSPSSSFDISLAGPHGQMYGGIVGG 162
           + R P +A   ++L G F +LSLS  F           ++S  I LAG  GQ+ GG V G
Sbjct: 150 SIRQPSAAGAVVTLQGTFEILSLSGSFLPPPA---PPGATSLTIFLAGGQGQVVGGSVVG 209

Query: 163 KVTTTSLVVIIAPEDKDVDMEK 185
           ++T    V++IA    +V  E+
Sbjct: 210 ELTAAGPVIVIAASFTNVAYER 228

[Close]

BLAST of Sed0020649 vs. TAIR 10
Match: AT3G60870.1 (AT-hook motif nuclear-localized protein 18 )

HSP 1 Score: 76.3 bits (186), Expect = 3.5e-14
Identity = 52/152 (34.21%), Postives = 86/152 (56.58%), Query Frame = 0


Query: 42  AGLQEQTKASMVITKHKDSSMNPVMIDISTRYDVVDSLLHFAQKRHVGLTVLSGSGSVSN 101
           AG + + KA +++T+   ++    +++I+   DV++SL  FA++R  G+ VL+G+G+V+N
Sbjct: 66  AGSKNKPKAPIIVTRDSANAFRCHVMEITNACDVMESLAVFARRRQRGVCVLTGNGAVTN 125

Query: 102 VTPRHPMSASTSISLHGPFSLLSLSACFSLDTTSFHSSPSSSFDISLAGPHGQMYGGIVG 161
           VT R P      +SLHG F +LSLS  F           +S   + LAG  GQ+ GG V 
Sbjct: 126 VTVRQP--GGGVVSLHGRFEILSLSGSFLPPPA---PPAASGLKVYLAGGQGQVIGGSVV 185

Query: 162 GKVTTTSLVVIIAPEDKDVDMEKSAIITIEES 194
           G +T +S VV++A    +   E+  +   EE+
Sbjct: 186 GPLTASSPVVVMAASFGNASYERLPLEEEEET 212

The following BLAST results are available for this feature:

BLAST of Sed0020649 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008450342.1	1.2e-43	48.62	PREDICTED: AT-hook motif nuclear-localized protein 28-like [Cucumis melo] >KAA00...	[more]
XP_004139130.1	2.6e-43	49.21	AT-hook motif nuclear-localized protein 17 [Cucumis sativus] >KGN66545.1 hypothe...	[more]
XP_038880172.1	2.2e-42	49.02	AT-hook motif nuclear-localized protein 17-like [Benincasa hispida]	[more]
KAG7023829.1	5.6e-38	53.97	AT-hook motif nuclear-localized protein 17, partial [Cucurbita argyrosperma subs...	[more]
KAG6590167.1	5.6e-38	53.97	AT-hook motif nuclear-localized protein 17, partial [Cucurbita argyrosperma subs...	[more]

BLAST of Sed0020649 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LTA2	1.5e-17	38.97	AT-hook motif nuclear-localized protein 17 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
Q9M9R4	2.4e-15	38.30	AT-hook motif nuclear-localized protein 28 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
Q9M2S3	6.9e-15	37.88	AT-hook motif nuclear-localized protein 15 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
O23620	2.9e-13	33.10	AT-hook motif nuclear-localized protein 23 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
Q9LZX7	5.0e-13	34.21	AT-hook motif nuclear-localized protein 18 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]

BLAST of Sed0020649 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UQT7	5.7e-44	48.62	AT-hook motif nuclear-localized protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3BP06	5.7e-44	48.62	AT-hook motif nuclear-localized protein OS=Cucumis melo OX=3656 GN=LOC103491979 ...	[more]
A0A0A0LXI2	1.3e-43	49.21	AT-hook motif nuclear-localized protein OS=Cucumis sativus OX=3659 GN=Csa_1G6290...	[more]
A0A6J1H9C1	1.3e-37	53.44	AT-hook motif nuclear-localized protein OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1JLJ2	6.7e-37	53.13	AT-hook motif nuclear-localized protein OS=Cucurbita maxima OX=3661 GN=LOC111485...	[more]

BLAST of Sed0020649 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G49700.1	1.1e-18	38.97	Predicted AT-hook DNA-binding family protein	[more]
AT1G14490.1	1.7e-16	38.30	Predicted AT-hook DNA-binding family protein	[more]
AT3G55560.1	4.9e-16	37.88	AT-hook protein of GA feedback 2	[more]
AT4G17800.1	2.1e-14	33.10	Predicted AT-hook DNA-binding family protein	[more]
AT3G60870.1	3.5e-14	34.21	AT-hook motif nuclear-localized protein 18	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005175	PPC domain	PFAM	PF03479	PCC	coord: 64..174 e-value: 3.4E-18 score: 66.0
IPR005175	PPC domain	PROSITE	PS51742	PPC	coord: 59..197 score: 25.684959
IPR005175	PPC domain	CDD	cd11378	DUF296	coord: 74..174 e-value: 1.54979E-17 score: 73.3886
None	No IPR available	GENE3D	3.30.1330.80		coord: 63..193 e-value: 4.5E-16 score: 60.8
None	No IPR available	PANTHER	PTHR31100:SF63	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN	coord: 48..176
None	No IPR available	SUPERFAMILY	117856	AF0104/ALDC/Ptd012-like	coord: 60..183
IPR014476	AT-hook motif nuclear-localized protein 15-29	PANTHER	PTHR31100	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15	coord: 48..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0020649.1	Sed0020649.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003680	minor groove of adenine-thymine-rich DNA binding