Sed0020636 (gene) Chayote v1

Overview
NameSed0020636
Typegene
OrganismSechium edule (Chayote v1)
DescriptionRetrotransposon protein
LocationLG13: 8154403 .. 8155714 (+)
RNA-Seq ExpressionSed0020636
SyntenySed0020636
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCCCGATAAAACTATAGCAGTTTTAACAATACTCTACACATGGCAGAACCAGTTTCTTCTTCTTGCGAATCTTGTAATGAACTACAACCCTAGGACCAAAAACTATAGCTCTTTCTTTAGACACCATTTTCGCCAAATGATCTTTTTCTCGATGATAAGACAAAGCGATTTAGCTTGTCGTGAGACAACTAGAATGAATCGTAGCTGCTTTGAAATTTTGTGCGACATGCTAAGGACCCACGGTGGTCTTCGAGGTACGGATTACATCGACGTGGAGGAAATGGTAGCCATGTTTCTACATATCATGGCTCATGATGTTAAGAACCATGTCGTTCGAAGAATATTTACAAGATCCGGTGAAACAGTGTCGCGACACTTTCAATCTATCCTTACTGCTGTTATGCGTTGTCATGACATTTTGTTCAAGAAACCCGAACCTATCCAACCATCATGCACCGATAGTAGATGGAAGTGGTTTGAGGTACCATTATTTTACCTTTATAAAATAGAGTCCTTGTAGGAACCAAATTTCATATCTTCCTTCGAACTATGCAGAATTGTCTAGGTGGATTGGATGGTACTCATATAGAGTTACAAGTCCCAGTTGAAAATCGTGCCTCCTTTAGAAATAGGAAGGGTATCATCACAACGAACGTTCTTGCGGTATGCGCTCCAAGCGGAGAGTTCATATACGTACTAGCTGGGTGGGAGGGATCAGCAGCTGACTCTAGAGTTCTTAGGGATGCTTTATCTCGTAACAATGGATTTCAAGTCCCTCATGGTAATTAAGGACTAAAAGAAAATGCTACTTTCACTTATAGTGAATGTATAATAACCTAGTGTTTATTGATCCAGGATACTATTACCTTTGTGATGCGGGTTATCCAAATGCTGATGGATTCCTAGCTCCCTATAGAGGCGAACGTTATCATCTATCGGATTGGAGGGGTAGCAATCCACCACGGAATCCAAGAGAGTTTTTTAATAAGGCACACTCCTCGGCACGAAATATAATAGAAAGAGCGTTCGGTGCATTAAAAAATCGTTGGGCTATTCTGCGACACAAGTCTTACTATCCTCCAAAAGTGCAAGTGAAGATCATAACAGCTTGTTGTCTCCTACATAATTTAATATGTAGGGAGATGGGCTCTACGATTGGTTTAGAGATATTAGGGGAGAACGATGCTACACTATACCAAGAGGATATGGACGATACCCCAACGATTAATTTCGTCGAAACATCGCCTCTTTGGACTGCATTTCGAGATTCCATGGCCCAAAGAATGTTTGACATAGGCCAAAACTAG

mRNA sequence

ATGGATCCCGATAAAACTATAGCAGTTTTAACAATACTCTACACATGGCAGAACCAGTTTCTTCTTCTTGCGAATCTTGTAATGAACTACAACCCTAGGACCAAAAACTATAGCTCTTTCTTTAGACACCATTTTCGCCAAATGATCTTTTTCTCGATGATAAGACAAAGCGATTTAGCTTGTCGTGAGACAACTAGAATGAATCGTAGCTGCTTTGAAATTTTGTGCGACATGCTAAGGACCCACGGTGGTCTTCGAGGTACGGATTACATCGACGTGGAGGAAATGGTAGCCATGTTTCTACATATCATGGCTCATGATGTTAAGAACCATGTCGTTCGAAGAATATTTACAAGATCCGGTGAAACAGTGTCGCGACACTTTCAATCTATCCTTACTGCTGTTATGCGTTGTCATGACATTTTGTTCAAGAAACCCGAACCTATCCAACCATCATGCACCGATAGTAGATGGAAGTGGTTTGAGAATTGTCTAGGTGGATTGGATGGTACTCATATAGAGTTACAAGTCCCAGTTGAAAATCGTGCCTCCTTTAGAAATAGGAAGGGTATCATCACAACGAACGTTCTTGCGGTATGCGCTCCAAGCGGAGAGTTCATATACGTACTAGCTGGGTGGGAGGGATCAGCAGCTGACTCTAGAGTTCTTAGGGATGCTTTATCTCGTAACAATGGATTTCAAGTCCCTCATGGATACTATTACCTTTGTGATGCGGGTTATCCAAATGCTGATGGATTCCTAGCTCCCTATAGAGGCGAACGTTATCATCTATCGGATTGGAGGGGTAGCAATCCACCACGGAATCCAAGAGAGTTTTTTAATAAGGCACACTCCTCGGCACGAAATATAATAGAAAGAGCGTTCGGTGCATTAAAAAATCGTTGGGCTATTCTGCGACACAAGTCTTACTATCCTCCAAAAGTGCAAGTGAAGATCATAACAGCTTGTTGTCTCCTACATAATTTAATATGTAGGGAGATGGGCTCTACGATTGGTTTAGAGATATTAGGGGAGAACGATGCTACACTATACCAAGAGGATATGGACGATACCCCAACGATTAATTTCGTCGAAACATCGCCTCTTTGGACTGCATTTCGAGATTCCATGGCCCAAAGAATGTTTGACATAGGCCAAAACTAG

Coding sequence (CDS)

ATGGATCCCGATAAAACTATAGCAGTTTTAACAATACTCTACACATGGCAGAACCAGTTTCTTCTTCTTGCGAATCTTGTAATGAACTACAACCCTAGGACCAAAAACTATAGCTCTTTCTTTAGACACCATTTTCGCCAAATGATCTTTTTCTCGATGATAAGACAAAGCGATTTAGCTTGTCGTGAGACAACTAGAATGAATCGTAGCTGCTTTGAAATTTTGTGCGACATGCTAAGGACCCACGGTGGTCTTCGAGGTACGGATTACATCGACGTGGAGGAAATGGTAGCCATGTTTCTACATATCATGGCTCATGATGTTAAGAACCATGTCGTTCGAAGAATATTTACAAGATCCGGTGAAACAGTGTCGCGACACTTTCAATCTATCCTTACTGCTGTTATGCGTTGTCATGACATTTTGTTCAAGAAACCCGAACCTATCCAACCATCATGCACCGATAGTAGATGGAAGTGGTTTGAGAATTGTCTAGGTGGATTGGATGGTACTCATATAGAGTTACAAGTCCCAGTTGAAAATCGTGCCTCCTTTAGAAATAGGAAGGGTATCATCACAACGAACGTTCTTGCGGTATGCGCTCCAAGCGGAGAGTTCATATACGTACTAGCTGGGTGGGAGGGATCAGCAGCTGACTCTAGAGTTCTTAGGGATGCTTTATCTCGTAACAATGGATTTCAAGTCCCTCATGGATACTATTACCTTTGTGATGCGGGTTATCCAAATGCTGATGGATTCCTAGCTCCCTATAGAGGCGAACGTTATCATCTATCGGATTGGAGGGGTAGCAATCCACCACGGAATCCAAGAGAGTTTTTTAATAAGGCACACTCCTCGGCACGAAATATAATAGAAAGAGCGTTCGGTGCATTAAAAAATCGTTGGGCTATTCTGCGACACAAGTCTTACTATCCTCCAAAAGTGCAAGTGAAGATCATAACAGCTTGTTGTCTCCTACATAATTTAATATGTAGGGAGATGGGCTCTACGATTGGTTTAGAGATATTAGGGGAGAACGATGCTACACTATACCAAGAGGATATGGACGATACCCCAACGATTAATTTCGTCGAAACATCGCCTCTTTGGACTGCATTTCGAGATTCCATGGCCCAAAGAATGTTTGACATAGGCCAAAACTAG

Protein sequence

MDPDKTIAVLTILYTWQNQFLLLANLVMNYNPRTKNYSSFFRHHFRQMIFFSMIRQSDLACRETTRMNRSCFEILCDMLRTHGGLRGTDYIDVEEMVAMFLHIMAHDVKNHVVRRIFTRSGETVSRHFQSILTAVMRCHDILFKKPEPIQPSCTDSRWKWFENCLGGLDGTHIELQVPVENRASFRNRKGIITTNVLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRGSNPPRNPREFFNKAHSSARNIIERAFGALKNRWAILRHKSYYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEDMDDTPTINFVETSPLWTAFRDSMAQRMFDIGQN
Homology
BLAST of Sed0020636 vs. NCBI nr
Match: KAA0046727.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0052100.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0056032.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0059561.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0065497.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 460.7 bits (1184), Expect = 1.3e-125
Identity = 222/383 (57.96%), Postives = 275/383 (71.80%), Query Frame = 0

Query: 1   MDPDKTIAVLTILYTWQNQFLLLANLVMNYNPRTKNYSSFFRHHFRQMIFFSMIRQSDLA 60
           MD  +  +++      Q Q LL+  L+ N   R  +     RH  RQ+ +F MI  SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 61  CRETTRMNRSCFEILCDMLRTHGGLRGTDYIDVEEMVAMFLHIMAHDVKNHVVRRIFTRS 120
           CR++TRM+R CF ILC +LRT  GL  T+ +DVEEMVAMFLHI+AHDVKN V++R F RS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 121 GETVSRHFQSILTAVMRCHDILFKKPEPIQPSCTDSRWKWFENCLGGLDGTHIELQVPVE 180
           GET+SRHF  +L AV+R HD L KKP+P+   CTD RW+WFENCLG LDGT+I++ VP  
Sbjct: 121 GETISRHFNMVLLAVIRLHDELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 181 NRASFRNRKGIITTNVLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYY 240
           +RA +R RKG + TNVL VC   G+F+YVLAGWEGSAADSR+LRDALSR N  +VP GYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 241 YLCDAGYPNADGFLAPYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK 300
           YL DAGYPNA+GFLAPYRG+RYHL +WRG  N P   +EFFN  HSSARN+IERAFG LK
Sbjct: 241 YLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK 300

Query: 301 NRWAILRHKSYYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEDMDDTP 360
            RWAILR KSYYP +VQ + I ACCLLHNLI REM +    + + E D+T      DD  
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADD-- 360

Query: 361 TINFVETSPLWTAFRDSMAQRMF 383
            I+++ETS  W+ +RD++A+ MF
Sbjct: 361 -IHYIETSNEWSQWRDNLAEEMF 380

BLAST of Sed0020636 vs. NCBI nr
Match: KAA0035620.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0038121.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0041646.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0047363.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0048378.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 459.1 bits (1180), Expect = 3.7e-125
Identity = 221/383 (57.70%), Postives = 275/383 (71.80%), Query Frame = 0

Query: 1   MDPDKTIAVLTILYTWQNQFLLLANLVMNYNPRTKNYSSFFRHHFRQMIFFSMIRQSDLA 60
           MD  +  +++      Q Q LL+  L+ N   R  +     RH  RQ+ +F MI  SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 61  CRETTRMNRSCFEILCDMLRTHGGLRGTDYIDVEEMVAMFLHIMAHDVKNHVVRRIFTRS 120
           CR++TRM+R CF ILC +LRT  GL  T+ +DVEEMVAMFLHI+AHDVKN V++R F RS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 121 GETVSRHFQSILTAVMRCHDILFKKPEPIQPSCTDSRWKWFENCLGGLDGTHIELQVPVE 180
           GET+SRHF  +L AV+R H+ L KKP+P+   CTD RW+WFENCLG LDGT+I++ VP  
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 181 NRASFRNRKGIITTNVLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYY 240
           +RA +R RKG + TNVL VC   G+F+YVLAGWEGSAADSR+LRDALSR N  +VP GYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 241 YLCDAGYPNADGFLAPYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK 300
           YL DAGYPNA+GFLAPYRG+RYHL +WRG  N P   +EFFN  HSSARN+IERAFG LK
Sbjct: 241 YLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK 300

Query: 301 NRWAILRHKSYYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEDMDDTP 360
            RWAILR KSYYP +VQ + I ACCLLHNLI REM +    + + E D+T      DD  
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADD-- 360

Query: 361 TINFVETSPLWTAFRDSMAQRMF 383
            I+++ETS  W+ +RD++A+ MF
Sbjct: 361 -IHYIETSNEWSQWRDNLAEEMF 380

BLAST of Sed0020636 vs. NCBI nr
Match: KAA0048361.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 454.9 bits (1169), Expect = 6.9e-124
Identity = 220/383 (57.44%), Postives = 273/383 (71.28%), Query Frame = 0

Query: 1   MDPDKTIAVLTILYTWQNQFLLLANLVMNYNPRTKNYSSFFRHHFRQMIFFSMIRQSDLA 60
           MD  +  +++      Q Q LL+  L+ N   R  +     RH  RQ+ +F MI  SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 61  CRETTRMNRSCFEILCDMLRTHGGLRGTDYIDVEEMVAMFLHIMAHDVKNHVVRRIFTRS 120
           CR++TRM+R CF ILC +LRT  GL  T+ +DVEEMVAMFLHI+AHDVKN V++R F RS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 121 GETVSRHFQSILTAVMRCHDILFKKPEPIQPSCTDSRWKWFENCLGGLDGTHIELQVPVE 180
           GET+SRHF  +L AV+R H+ L KKP+P+   CTD RWKWFENCLG LDGT+I++ VP  
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWKWFENCLGALDGTYIKVNVPAS 180

Query: 181 NRASFRNRKGIITTNVLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYY 240
           +RA +R RKG + TNVL VC   G+F+YVLAGWEG AADSR+LRDALSR N  +VP GYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGLAADSRILRDALSRPNRLKVPKGYY 240

Query: 241 YLCDAGYPNADGFLAPYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK 300
           YL DAGY NA+GFLAPYRG+RYHL +WRG  N P   +EFFN  HSSARN+IERAFG LK
Sbjct: 241 YLVDAGYQNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK 300

Query: 301 NRWAILRHKSYYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEDMDDTP 360
            RWAILR KSYYP +VQ + I ACCLLHNLI REM +    + + E D+T      DD  
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADD-- 360

Query: 361 TINFVETSPLWTAFRDSMAQRMF 383
            I+++ETS  W+ +RD++A+ MF
Sbjct: 361 -IHYIETSNEWSQWRDNLAEEMF 380

BLAST of Sed0020636 vs. NCBI nr
Match: KAA0047510.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 454.1 bits (1167), Expect = 1.2e-123
Identity = 219/383 (57.18%), Postives = 271/383 (70.76%), Query Frame = 0

Query: 1   MDPDKTIAVLTILYTWQNQFLLLANLVMNYNPRTKNYSSFFRHHFRQMIFFSMIRQSDLA 60
           MD  +  +++      Q Q LL+  L+ N   R  +     RH  RQ+ +F MI  SDL 
Sbjct: 1   MDEQELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 61  CRETTRMNRSCFEILCDMLRTHGGLRGTDYIDVEEMVAMFLHIMAHDVKNHVVRRIFTRS 120
           CRE+TRM+R CF ILC +LRT  GL  T+ +DVEEMVAMFLHI+AHDVKN V++R F RS
Sbjct: 61  CRESTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 121 GETVSRHFQSILTAVMRCHDILFKKPEPIQPSCTDSRWKWFENCLGGLDGTHIELQVPVE 180
           GET+S HF  +L AV+R H+ L KKP+P+   CTD RW+WFENCLG LDGT+I++ VP  
Sbjct: 121 GETISCHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 181 NRASFRNRKGIITTNVLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYY 240
           +RA +R RKG + TNVL VC   G+F+YVLAGWEGSAADSR+LRDALSR NG +VP GYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDRKGDFVYVLAGWEGSAADSRILRDALSRPNGLKVPKGYY 240

Query: 241 YLCDAGYPNADGFLAPYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK 300
           YL DAGYPN +GFLAPYRG+RYHL +W G  N P   +EFFN  H SARN+IERAFG LK
Sbjct: 241 YLVDAGYPNPEGFLAPYRGQRYHLQEWHGPENAPSTSKEFFNMKHPSARNVIERAFGVLK 300

Query: 301 NRWAILRHKSYYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEDMDDTP 360
            RWAILR KSYYP +VQ + I ACCLLHNLI REM +    + + E D+T      DD  
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADD-- 360

Query: 361 TINFVETSPLWTAFRDSMAQRMF 383
            I+++ETS  W+ +RD +A+ MF
Sbjct: 361 -IHYIETSNEWSQWRDDLAEEMF 380

BLAST of Sed0020636 vs. NCBI nr
Match: KAA0051057.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 453.8 bits (1166), Expect = 1.5e-123
Identity = 218/383 (56.92%), Postives = 272/383 (71.02%), Query Frame = 0

Query: 1   MDPDKTIAVLTILYTWQNQFLLLANLVMNYNPRTKNYSSFFRHHFRQMIFFSMIRQSDLA 60
           MD  +  +++      Q Q LL+  L+ N   R  +     RH  RQ+ +F MI  SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 61  CRETTRMNRSCFEILCDMLRTHGGLRGTDYIDVEEMVAMFLHIMAHDVKNHVVRRIFTRS 120
           C ++TRM+R CF ILC +LRT  GL  T+ +DVEEMVAMFLHI+ HDVKN V++R F RS
Sbjct: 61  CHQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILVHDVKNRVIQREFMRS 120

Query: 121 GETVSRHFQSILTAVMRCHDILFKKPEPIQPSCTDSRWKWFENCLGGLDGTHIELQVPVE 180
           GET+SRHF  +L AV+R H+ L KKP+P+   CTD RW+WFENCLG LDGT+I++ VP  
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 181 NRASFRNRKGIITTNVLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYY 240
           +RA +R RKG + TNVL VC   G+F+YVLAGWEGSAADSR+LRDALSR N  +VP GYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 241 YLCDAGYPNADGFLAPYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK 300
           YL DAGYPNA+GFLAPYRG+RYHL +WRG  N P   +EFFN  HS ARN+IERAFG LK
Sbjct: 241 YLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSFARNVIERAFGVLK 300

Query: 301 NRWAILRHKSYYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEDMDDTP 360
            RWAILR KSYYP +VQ + I ACCLLHNLI REM +    + + E D+T      DD  
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTTADD-- 360

Query: 361 TINFVETSPLWTAFRDSMAQRMF 383
            I+++ETS  W+ +RD++A+ MF
Sbjct: 361 -IHYIETSNEWSQWRDNLAEEMF 380

BLAST of Sed0020636 vs. ExPASy Swiss-Prot
Match: Q9M2U3 (Protein ALP1-like OS=Arabidopsis thaliana OX=3702 GN=At3g55350 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.5e-17
Identity = 81/321 (25.23%), Postives = 136/321 (42.37%), Query Frame = 0

Query: 66  RMNRSCFEILCDMLRTHGGLRGTDYID-------VEEMVAMFLHIMAHDVKNHVVRRIFT 125
           +++R  F+ +C +++     +  ++ D       + + VA+ L  +       V+   F 
Sbjct: 77  KISRKTFDYICSLVKADFTAKPANFSDSNGNPLSLNDRVAVALRRLGSGESLSVIGETFG 136

Query: 126 RSGETVSRHFQSILTAV--MRCHDILFKKPEPIQPSCTDSRWKWFE------NCLGGLDG 185
            +  TVS+     + ++     H + +       PS  D     FE      NC G +D 
Sbjct: 137 MNQSTVSQITWRFVESMEERAIHHLSW-------PSKLDEIKSKFEKISGLPNCCGAIDI 196

Query: 186 THIELQVPV---ENRASFRNRKGIITTNVLAVCAPSGEFIYVLAGWEGSAADSRVLRDA- 245
           THI + +P     N+      K    T + AV  P   F+ V+AGW GS  D  VL+++ 
Sbjct: 197 THIVMNLPAVEPSNKVWLDGEKNFSMT-LQAVVDPDMRFLDVIAGWPGSLNDDVVLKNSG 256

Query: 246 -------LSRNNGFQVPHG------YYYLCDAGYPNADGFLAPYRGERYHLSDWRGSNPP 305
                    R NG ++P         Y + D+G+P     L PY+G+           P 
Sbjct: 257 FYKLVEKGKRLNGEKLPLSERTELREYIVGDSGFPLLPWLLTPYQGK-----------PT 316

Query: 306 RNPREFFNKAHSSARNIIERAFGALKNRWAILRHKSYYPPKVQV-KIITACCLLHNLICR 354
             P+  FNK HS A    + A   LK+RW I+    + P + ++ +II  CCLLHN+I  
Sbjct: 317 SLPQTEFNKRHSEATKAAQMALSKLKDRWRIINGVMWMPDRNRLPRIIFVCCLLHNIIID 376

BLAST of Sed0020636 vs. ExPASy Swiss-Prot
Match: Q96MB7 (Putative nuclease HARBI1 OS=Homo sapiens OX=9606 GN=HARBI1 PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 5.7e-12
Identity = 51/170 (30.00%), Postives = 80/170 (47.06%), Query Frame = 0

Query: 165 LGGLDGTHIELQVPVENRASFRNRKGIITTNVLAVCAPSGEFIYVLAGWEGSAADSRVL- 224
           +G +D  H+ ++ P     S+ NRKG+ + N L VC   G  + V   W GS  D  VL 
Sbjct: 145 MGVVDCIHVAIKAPNAEDLSYVNRKGLHSLNCLMVCDIRGTLMTVETNWPGSLQDCAVLQ 204

Query: 225 RDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRGSNPPRNPREF-FNK 284
           + +LS      +    + L D+ +     FL  +     H+        P  P E+ +N 
Sbjct: 205 QSSLSSQFEAGMHKDSWLLGDSSF-----FLRTWLMTPLHI--------PETPAEYRYNM 264

Query: 285 AHSSARNIIERAFGALKNRWAIL---RHKSYYPPKVQVKIITACCLLHNL 330
           AHS+  ++IE+ F  L +R+  L   +    Y P+    II ACC+LHN+
Sbjct: 265 AHSATHSVIEKTFRTLCSRFRCLDGSKGALQYSPEKSSHIILACCVLHNI 301

BLAST of Sed0020636 vs. ExPASy Swiss-Prot
Match: Q17QR8 (Putative nuclease HARBI1 OS=Bos taurus OX=9913 GN=HARBI1 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.3e-11
Identity = 51/170 (30.00%), Postives = 80/170 (47.06%), Query Frame = 0

Query: 165 LGGLDGTHIELQVPVENRASFRNRKGIITTNVLAVCAPSGEFIYVLAGWEGSAADSRVL- 224
           +G +D  H+ ++ P     S+ NRKG+ + N L VC   G  + V   W GS  D  VL 
Sbjct: 145 IGVVDCMHVAIKAPNAEDLSYVNRKGLHSLNCLMVCDIRGALMTVETSWPGSLQDCVVLQ 204

Query: 225 RDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRGSNPPRNPREF-FNK 284
           + +LS      +    + L D+ +     FL  +     H+        P  P E+ +N 
Sbjct: 205 QSSLSSQFEAGMHKESWLLGDSSF-----FLRTWLMTPLHI--------PETPAEYRYNM 264

Query: 285 AHSSARNIIERAFGALKNRWAIL---RHKSYYPPKVQVKIITACCLLHNL 330
           AHS+  ++IE+ F  L +R+  L   +    Y P+    II ACC+LHN+
Sbjct: 265 AHSATHSVIEKTFRTLCSRFRCLDGSKGALQYSPEKSSHIILACCVLHNI 301

BLAST of Sed0020636 vs. ExPASy Swiss-Prot
Match: Q6AZB8 (Putative nuclease HARBI1 OS=Danio rerio OX=7955 GN=harbi1 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 3.1e-10
Identity = 49/173 (28.32%), Postives = 79/173 (45.66%), Query Frame = 0

Query: 163 NCLGGLDGTHIELQVPVENRASFRNRKGIITTNVLAVCAPSGEFIYVLAGWEGSAADSRV 222
           N  G +D  HI ++ P  + +S+ N+KG  + N   VC   G  +     W GS  D  V
Sbjct: 143 NVTGVVDCAHIAIKAPNADDSSYVNKKGFHSINCQLVCDARGLLLSAETHWPGSLTDRAV 202

Query: 223 LRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRGS--NPPRNPREF- 282
            + +               L +    + +G+L      RY L  W  +    P +P ++ 
Sbjct: 203 FKQS-----------NVAKLFEEQENDDEGWL--LGDNRYPLKKWLMTPVQSPESPADYR 262

Query: 283 FNKAHSSARNIIERAFGALKNRWAIL-RHKSY--YPPKVQVKIITACCLLHNL 330
           +N AH++   I++R F A++ R+  L   K Y  Y P+    II ACC+LHN+
Sbjct: 263 YNLAHTTTHEIVDRTFRAIQTRFRCLDGAKGYLQYSPEKCSHIIQACCVLHNI 302

BLAST of Sed0020636 vs. ExPASy TrEMBL
Match: A0A5A7TXW1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00370 PE=3 SV=1)

HSP 1 Score: 460.7 bits (1184), Expect = 6.1e-126
Identity = 222/383 (57.96%), Postives = 275/383 (71.80%), Query Frame = 0

Query: 1   MDPDKTIAVLTILYTWQNQFLLLANLVMNYNPRTKNYSSFFRHHFRQMIFFSMIRQSDLA 60
           MD  +  +++      Q Q LL+  L+ N   R  +     RH  RQ+ +F MI  SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 61  CRETTRMNRSCFEILCDMLRTHGGLRGTDYIDVEEMVAMFLHIMAHDVKNHVVRRIFTRS 120
           CR++TRM+R CF ILC +LRT  GL  T+ +DVEEMVAMFLHI+AHDVKN V++R F RS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 121 GETVSRHFQSILTAVMRCHDILFKKPEPIQPSCTDSRWKWFENCLGGLDGTHIELQVPVE 180
           GET+SRHF  +L AV+R HD L KKP+P+   CTD RW+WFENCLG LDGT+I++ VP  
Sbjct: 121 GETISRHFNMVLLAVIRLHDELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 181 NRASFRNRKGIITTNVLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYY 240
           +RA +R RKG + TNVL VC   G+F+YVLAGWEGSAADSR+LRDALSR N  +VP GYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 241 YLCDAGYPNADGFLAPYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK 300
           YL DAGYPNA+GFLAPYRG+RYHL +WRG  N P   +EFFN  HSSARN+IERAFG LK
Sbjct: 241 YLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK 300

Query: 301 NRWAILRHKSYYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEDMDDTP 360
            RWAILR KSYYP +VQ + I ACCLLHNLI REM +    + + E D+T      DD  
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADD-- 360

Query: 361 TINFVETSPLWTAFRDSMAQRMF 383
            I+++ETS  W+ +RD++A+ MF
Sbjct: 361 -IHYIETSNEWSQWRDNLAEEMF 380

BLAST of Sed0020636 vs. ExPASy TrEMBL
Match: A0A5D3BDX0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G00360 PE=3 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 1.8e-125
Identity = 221/383 (57.70%), Postives = 275/383 (71.80%), Query Frame = 0

Query: 1   MDPDKTIAVLTILYTWQNQFLLLANLVMNYNPRTKNYSSFFRHHFRQMIFFSMIRQSDLA 60
           MD  +  +++      Q Q LL+  L+ N   R  +     RH  RQ+ +F MI  SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 61  CRETTRMNRSCFEILCDMLRTHGGLRGTDYIDVEEMVAMFLHIMAHDVKNHVVRRIFTRS 120
           CR++TRM+R CF ILC +LRT  GL  T+ +DVEEMVAMFLHI+AHDVKN V++R F RS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 121 GETVSRHFQSILTAVMRCHDILFKKPEPIQPSCTDSRWKWFENCLGGLDGTHIELQVPVE 180
           GET+SRHF  +L AV+R H+ L KKP+P+   CTD RW+WFENCLG LDGT+I++ VP  
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 181 NRASFRNRKGIITTNVLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYY 240
           +RA +R RKG + TNVL VC   G+F+YVLAGWEGSAADSR+LRDALSR N  +VP GYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 241 YLCDAGYPNADGFLAPYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK 300
           YL DAGYPNA+GFLAPYRG+RYHL +WRG  N P   +EFFN  HSSARN+IERAFG LK
Sbjct: 241 YLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK 300

Query: 301 NRWAILRHKSYYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEDMDDTP 360
            RWAILR KSYYP +VQ + I ACCLLHNLI REM +    + + E D+T      DD  
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADD-- 360

Query: 361 TINFVETSPLWTAFRDSMAQRMF 383
            I+++ETS  W+ +RD++A+ MF
Sbjct: 361 -IHYIETSNEWSQWRDNLAEEMF 380

BLAST of Sed0020636 vs. ExPASy TrEMBL
Match: A0A5A7U476 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00800 PE=3 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 3.3e-124
Identity = 220/383 (57.44%), Postives = 273/383 (71.28%), Query Frame = 0

Query: 1   MDPDKTIAVLTILYTWQNQFLLLANLVMNYNPRTKNYSSFFRHHFRQMIFFSMIRQSDLA 60
           MD  +  +++      Q Q LL+  L+ N   R  +     RH  RQ+ +F MI  SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 61  CRETTRMNRSCFEILCDMLRTHGGLRGTDYIDVEEMVAMFLHIMAHDVKNHVVRRIFTRS 120
           CR++TRM+R CF ILC +LRT  GL  T+ +DVEEMVAMFLHI+AHDVKN V++R F RS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 121 GETVSRHFQSILTAVMRCHDILFKKPEPIQPSCTDSRWKWFENCLGGLDGTHIELQVPVE 180
           GET+SRHF  +L AV+R H+ L KKP+P+   CTD RWKWFENCLG LDGT+I++ VP  
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWKWFENCLGALDGTYIKVNVPAS 180

Query: 181 NRASFRNRKGIITTNVLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYY 240
           +RA +R RKG + TNVL VC   G+F+YVLAGWEG AADSR+LRDALSR N  +VP GYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGLAADSRILRDALSRPNRLKVPKGYY 240

Query: 241 YLCDAGYPNADGFLAPYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK 300
           YL DAGY NA+GFLAPYRG+RYHL +WRG  N P   +EFFN  HSSARN+IERAFG LK
Sbjct: 241 YLVDAGYQNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK 300

Query: 301 NRWAILRHKSYYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEDMDDTP 360
            RWAILR KSYYP +VQ + I ACCLLHNLI REM +    + + E D+T      DD  
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADD-- 360

Query: 361 TINFVETSPLWTAFRDSMAQRMF 383
            I+++ETS  W+ +RD++A+ MF
Sbjct: 361 -IHYIETSNEWSQWRDNLAEEMF 380

BLAST of Sed0020636 vs. ExPASy TrEMBL
Match: A0A5A7TWH8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G001380 PE=3 SV=1)

HSP 1 Score: 454.1 bits (1167), Expect = 5.7e-124
Identity = 219/383 (57.18%), Postives = 271/383 (70.76%), Query Frame = 0

Query: 1   MDPDKTIAVLTILYTWQNQFLLLANLVMNYNPRTKNYSSFFRHHFRQMIFFSMIRQSDLA 60
           MD  +  +++      Q Q LL+  L+ N   R  +     RH  RQ+ +F MI  SDL 
Sbjct: 1   MDEQELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 61  CRETTRMNRSCFEILCDMLRTHGGLRGTDYIDVEEMVAMFLHIMAHDVKNHVVRRIFTRS 120
           CRE+TRM+R CF ILC +LRT  GL  T+ +DVEEMVAMFLHI+AHDVKN V++R F RS
Sbjct: 61  CRESTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 121 GETVSRHFQSILTAVMRCHDILFKKPEPIQPSCTDSRWKWFENCLGGLDGTHIELQVPVE 180
           GET+S HF  +L AV+R H+ L KKP+P+   CTD RW+WFENCLG LDGT+I++ VP  
Sbjct: 121 GETISCHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 181 NRASFRNRKGIITTNVLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYY 240
           +RA +R RKG + TNVL VC   G+F+YVLAGWEGSAADSR+LRDALSR NG +VP GYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDRKGDFVYVLAGWEGSAADSRILRDALSRPNGLKVPKGYY 240

Query: 241 YLCDAGYPNADGFLAPYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK 300
           YL DAGYPN +GFLAPYRG+RYHL +W G  N P   +EFFN  H SARN+IERAFG LK
Sbjct: 241 YLVDAGYPNPEGFLAPYRGQRYHLQEWHGPENAPSTSKEFFNMKHPSARNVIERAFGVLK 300

Query: 301 NRWAILRHKSYYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEDMDDTP 360
            RWAILR KSYYP +VQ + I ACCLLHNLI REM +    + + E D+T      DD  
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADD-- 360

Query: 361 TINFVETSPLWTAFRDSMAQRMF 383
            I+++ETS  W+ +RD +A+ MF
Sbjct: 361 -IHYIETSNEWSQWRDDLAEEMF 380

BLAST of Sed0020636 vs. ExPASy TrEMBL
Match: A0A5A7U9H2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold678G00110 PE=3 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 7.4e-124
Identity = 218/383 (56.92%), Postives = 272/383 (71.02%), Query Frame = 0

Query: 1   MDPDKTIAVLTILYTWQNQFLLLANLVMNYNPRTKNYSSFFRHHFRQMIFFSMIRQSDLA 60
           MD  +  +++      Q Q LL+  L+ N   R  +     RH  RQ+ +F MI  SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 61  CRETTRMNRSCFEILCDMLRTHGGLRGTDYIDVEEMVAMFLHIMAHDVKNHVVRRIFTRS 120
           C ++TRM+R CF ILC +LRT  GL  T+ +DVEEMVAMFLHI+ HDVKN V++R F RS
Sbjct: 61  CHQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILVHDVKNRVIQREFMRS 120

Query: 121 GETVSRHFQSILTAVMRCHDILFKKPEPIQPSCTDSRWKWFENCLGGLDGTHIELQVPVE 180
           GET+SRHF  +L AV+R H+ L KKP+P+   CTD RW+WFENCLG LDGT+I++ VP  
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 181 NRASFRNRKGIITTNVLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYY 240
           +RA +R RKG + TNVL VC   G+F+YVLAGWEGSAADSR+LRDALSR N  +VP GYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 241 YLCDAGYPNADGFLAPYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK 300
           YL DAGYPNA+GFLAPYRG+RYHL +WRG  N P   +EFFN  HS ARN+IERAFG LK
Sbjct: 241 YLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSFARNVIERAFGVLK 300

Query: 301 NRWAILRHKSYYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEDMDDTP 360
            RWAILR KSYYP +VQ + I ACCLLHNLI REM +    + + E D+T      DD  
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTTADD-- 360

Query: 361 TINFVETSPLWTAFRDSMAQRMF 383
            I+++ETS  W+ +RD++A+ MF
Sbjct: 361 -IHYIETSNEWSQWRDNLAEEMF 380

BLAST of Sed0020636 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 216.9 bits (551), Expect = 2.9e-56
Identity = 118/297 (39.73%), Postives = 166/297 (55.89%), Query Frame = 0

Query: 61  CRETTRMNRSCFEILCDMLRTHGGLRGTDYIDVEEMVAMFLHIMAHDVKNHVVRRIFTRS 120
           C E  RM++  F  LCD+L+T G LR T+ I +E  +A+FL I+ H+++   V+ +F  S
Sbjct: 42  CFENFRMDKPVFYKLCDLLQTRGLLRHTNRIKIEAQLAIFLFIIGHNLRTRAVQELFCYS 101

Query: 121 GETVSRHFQSILTAVMRCHDILFKKPEPIQPSCT-DSRWKWFENCLGGLDGTHIELQVPV 180
           GET+SRHF ++L AV+      F   +P   S T ++   +F++C+G +D  HI + V V
Sbjct: 102 GETISRHFNNVLNAVIAISKDFF---QPNSNSDTLENDDPYFKDCVGVVDSFHIPVMVGV 161

Query: 181 ENRASFRNRKGIITTNVLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGY 240
           + +  FRN  G++T NVLA  +    F YVLAGWEGSA+D +VL  AL+R N  QVP G 
Sbjct: 162 DEQGPFRNGNGLLTQNVLAASSFDLRFNYVLAGWEGSASDQQVLNAALTRRNKLQVPQGK 221

Query: 241 YYLCDAGYPNADGFLAPYRGERYHLSDWRGSNPPRNPREFFNKAHSSARNIIERAFGALK 300
           YY+ D  YPN  GF+APY G          +N     +E FN+ H      I R FGALK
Sbjct: 222 YYIVDNKYPNLPGFIAPYHGV--------STNSREEAKEMFNERHKLLHRAIHRTFGALK 281

Query: 301 NRWAILRHKSYYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEDMD 357
            R+ IL     YP + QVK++ A C LHN +  E    +   +  E       ED +
Sbjct: 282 ERFPILLSAPPYPLQTQVKLVIAACALHNYVRLEKPDDLVFRMFEEETLAEAGEDRE 327

BLAST of Sed0020636 vs. TAIR 10
Match: AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 168.3 bits (425), Expect = 1.2e-41
Identity = 100/264 (37.88%), Postives = 145/264 (54.92%), Query Frame = 0

Query: 54  IRQSDLACRETTRMNRSCFEILCDMLRTHGGLRGTDYIDVEEMVAMFLHIMAHDVKNHVV 113
           ++Q   AC +  RM+  CF  LC+ML+T+  L+ T  I +EE VAMFL I  H+     V
Sbjct: 59  LQQDAAACLQLLRMSLPCFTTLCNMLQTNYDLQPTLNISIEESVAMFLRICGHNEVYRDV 118

Query: 114 RRIFTRSGETVSRHFQSILTA--VMRCHDI-------LFKKPEPIQPSCTDSR-WKWFEN 173
              F R+ ETV R F+ +LTA  ++ C  I       L++ PE +Q    D R W +F  
Sbjct: 119 GLRFGRNQETVQRKFREVLTATELLACDYIRTPTRQELYRIPERLQ---VDQRYWPYFSG 178

Query: 174 CLGGLDGTHIELQVPVENRASFRNRKGIITTNVLAVCAPSGEFIYVLAGWEGSAADSRVL 233
            +G +DGTH+ ++V  + +  + NR    + N++A+C     F Y+  G  GS  D+ VL
Sbjct: 179 FVGAMDGTHVCVKVKPDLQGMYWNRHDNASLNIMAICDLKMLFTYIWNGAPGSCYDTAVL 238

Query: 234 RDALSRNNGFQVPHG-YYYLCDAGYPNADGFLAPYRGE-----RYHLSDWRGSNPPRNPR 293
           + A   ++ F +P    YYL D+GYPN  G LAPYR       RYH+S +     PRN  
Sbjct: 239 QIAQQSDSEFPLPPSEKYYLVDSGYPNKQGLLAPYRSSRNRVVRYHMSQFYYGPRPRNKH 298

Query: 294 EFFNKAHSSARNIIERAFGALKNR 302
           E FN+ H+S R++IER F   KN+
Sbjct: 299 ELFNQCHTSLRSVIERTFRIWKNK 319

BLAST of Sed0020636 vs. TAIR 10
Match: AT5G35695.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 116.3 bits (290), Expect = 5.4e-26
Identity = 61/132 (46.21%), Postives = 77/132 (58.33%), Query Frame = 0

Query: 206 FIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLS 265
           FIYVL+GWEGSA DSRVL DAL +          +YL D G+ N   FLAP+RG RYHL 
Sbjct: 25  FIYVLSGWEGSAHDSRVLSDALRK----------FYLVDCGFANRLNFLAPFRGVRYHLQ 84

Query: 266 DWRGS-NPPRNPREFFNKAHSSARNIIERAFGALKNRWAILRHKSYYPPKVQVKIITACC 325
           ++ G    P  P E FN  H S RN+IER FG  K+R+AI +    +  K Q  ++  C 
Sbjct: 85  EFAGQRRDPETPHELFNLRHVSLRNVIERIFGIFKSRFAIFKSAPPFSYKKQAGLVLTCA 144

Query: 326 LLHNLICREMGS 337
            LHN + +E  S
Sbjct: 145 ALHNFLRKECRS 146

BLAST of Sed0020636 vs. TAIR 10
Match: AT5G28950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 448 Blast hits to 446 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 21; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 90.5 bits (223), Expect = 3.2e-18
Identity = 49/115 (42.61%), Postives = 67/115 (58.26%), Query Frame = 0

Query: 158 WKWFENCLGGLDGTHIELQVPVENRASFRNRKGIITTNVLAVCAPSGEFIYVLAGWEGSA 217
           + +F++C+G +D THI   V  +   SFRNRKG I+ N+LA C    EF+YVL+GWEGSA
Sbjct: 19  YPYFKDCVGAIDDTHIFAMVSQKKMPSFRNRKGDISQNMLAACNFDVEFMYVLSGWEGSA 78

Query: 218 ADSRVLRDALSRN-NGFQVP---HGYYYLCDAGYPNADGFLAPYRGERYHLSDWR 269
            DS+VL DAL+RN N   VP        + +    N D  L     +R + + WR
Sbjct: 79  HDSKVLNDALTRNSNRLPVPEEDESAEEVVEEVNDNNDEVLTTQDQQREYANQWR 133

BLAST of Sed0020636 vs. TAIR 10
Match: AT4G10890.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2439 (InterPro:IPR018838); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 67.8 bits (164), Expect = 2.2e-11
Identity = 36/92 (39.13%), Postives = 51/92 (55.43%), Query Frame = 0

Query: 219 DSRVLRDALSRNNGFQVPH---GYYYLCDAGYPNADGFLAPYRGERYHLSDWRGSNPPRN 278
           D++VL+   +RN  F  PH     YYL ++ YP   G+L P+R   YHL  +    PP  
Sbjct: 73  DTKVLK-YCARNESFS-PHPSNRKYYLVNSVYPTTTGYLGPHRRILYHLGQFGRGGPPVT 132

Query: 279 PREFFNKAHSSARNIIERAFGALKNRWAILRH 308
            +E FN+ H   R++I+R FG  K +W IL H
Sbjct: 133 VQELFNRKHLDLRSVIDRTFGVWKAKWRILDH 162

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0046727.11.3e-12557.96retrotransposon protein [Cucumis melo var. makuwa] >KAA0052100.1 retrotransposon... [more]
KAA0035620.13.7e-12557.70retrotransposon protein [Cucumis melo var. makuwa] >KAA0038121.1 retrotransposon... [more]
KAA0048361.16.9e-12457.44retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0047510.11.2e-12357.18retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0051057.11.5e-12356.92retrotransposon protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Q9M2U31.5e-1725.23Protein ALP1-like OS=Arabidopsis thaliana OX=3702 GN=At3g55350 PE=2 SV=1[more]
Q96MB75.7e-1230.00Putative nuclease HARBI1 OS=Homo sapiens OX=9606 GN=HARBI1 PE=1 SV=1[more]
Q17QR81.3e-1130.00Putative nuclease HARBI1 OS=Bos taurus OX=9913 GN=HARBI1 PE=2 SV=1[more]
Q6AZB83.1e-1028.32Putative nuclease HARBI1 OS=Danio rerio OX=7955 GN=harbi1 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A5A7TXW16.1e-12657.96Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3BDX01.8e-12557.70Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7U4763.3e-12457.44Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7TWH85.7e-12457.18Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7U9H27.4e-12456.92Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
AT5G41980.12.9e-5639.73CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int... [more]
AT1G43722.11.2e-4137.88unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G35695.15.4e-2646.21CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int... [more]
AT5G28950.13.2e-1842.61unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G10890.12.2e-1139.13unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2439... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027806Harbinger transposase-derived nuclease domainPFAMPF13359DDE_Tnp_4coord: 168..328
e-value: 1.5E-29
score: 102.7
NoneNo IPR availablePANTHERPTHR22930UNCHARACTERIZEDcoord: 45..330
NoneNo IPR availablePANTHERPTHR22930:SF211NUCLEASE HARBI1-RELATEDcoord: 45..330

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0020636.1Sed0020636.1mRNA