Sed0020601 (gene) Chayote v1

Overview
NameSed0020601
Typegene
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
LocationLG04: 34888819 .. 34890360 (-)
RNA-Seq ExpressionSed0020601
SyntenySed0020601
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCATGACTCTGCTTTTTCCCAATCTGTTTAAGTGGACAACAAACTGTAATGATGATGACAAAACACCCACCACTCCCAAATTACTTTTTGTGGTGTGCCATCCCTTTGATCTTTAACCATTCTGATCTTCATCTTCTTCACTCACAGGCCTCCAATTTGGTCATGGTTTCATCGAATCGGAGCGGCGAAGAGACGCGTTTCTTTGTAGATTGCACTCGTGGCGGCGTCGGCGAGGGCGCGGAGCAGGTGCACGGCCGTAGTGTGCTCTTGCTATGCACCTTCAGGAACTAAGACAAACACCATTTTCAGGTCACGTTCTGTTGAGGAACAGAGAGATGGGGTCAACCAAAAATGGAGTAATCATGAACTTCAACATGCTAATGGAAATGGAAATGGGCCTGGTGGGATTCCCTTGGATTTCCCAAATCTCAAGAGCAATTTGAAGAAAAAGACTAATAAGGACAAGGAGAATTGTCCTTCAGAAACAAGGAAAGTGAACTGGCCTGATGCCCATGGAAAAAATATTGCTCATATCCAAGAGTTTGAACCAAGGTATGATTTATCTTTAGTGTTAGTTTTTTTTTTTGAAGTATAAATGGAGGAGAGGGGCCACAAACTTACGTATAAGGTATTACTATTCAAATAAATGAGGGTAAACTATCAATTTCTAATATGGTACTCCTAATTGTGGTGTTGAACTGGATTATCACTAAAAAATTGAAACCAACACGTCATCAACCCTTTTGATAGGTATGGTTTAGTTTATAAATTATTAGGAATGAATTGCAAATTCTTGGTCGTAGATTAGCTTTGTTTTGTAATTCGTGAGTGTTTTGAGCAATTTATTAATACTCTGCATCTCGAATAAGCTCATAGGACAATTAGCTCGATCCTGCTACATTTAATTGTCAATAATCCTAGTAAGATACTAAAATATAGGTAGTCATCTTGCCCTTTTTATATTCGTAAATATTCAGATTAACTTACATAAACACATTACTACATTTAATTGGAAAATTAATTCTTATGTAGCGAACTACAATGAATTGAATTAATTTCATAAAGTACTTTATGAATTTCAACTCTCATTTAACCACTAAAACAACCGGTGATTAGAGTTTGTTGTAGGGAAGAAATTATTAAGACTACGATGAATTAAACTAATTTCATAAAAGTACTTTATGAATTTCAACTTTCATTTGATCACTAACACAATCCATGGTAATTAAATTTGTTATAGGGAAGAAATTATTTAGGCCTTAATGTAGTGGGAGAGGACAATGGGAAGTTGGAGAGAGAGTTGAGATGTGGGGAAAGAAATACAAATACAATAATGGGCCATATGTTCTATGATTAAGGTTGGATTAAGTGAATGAATATTAAAGCAACCATGTTGTATTTGAAACCATATAGTTTATTTGAACTACAAAGTTGAATTATATGTTTATTATGGAAGTTTGTGGTTATTGTGTAACAGTGCATCAGGAGATGGGGAGCTTGAGGGAGTAAGGAACTCTTGTGTCTGCACAATTCAATAA

mRNA sequence

ATGATCATGACTCTGCTTTTTCCCAATCTGTTTAAGTGGACAACAAACTGTAATGATGATGACAAAACACCCACCACTCCCAAATTACTTTTTGAACAGAGAGATGGGGTCAACCAAAAATGGAGTAATCATGAACTTCAACATGCTAATGGAAATGGAAATGGGCCTGGTGGGATTCCCTTGGATTTCCCAAATCTCAAGAGCAATTTGAAGAAAAAGACTAATAAGGACAAGGAGAATTGTCCTTCAGAAACAAGGAAAGTGAACTGGCCTGATGCCCATGGAAAAAATATTGCTCATATCCAAGAGTTTGAACCAAGTGCATCAGGAGATGGGGAGCTTGAGGGAGTAAGGAACTCTTGTGTCTGCACAATTCAATAA

Coding sequence (CDS)

ATGATCATGACTCTGCTTTTTCCCAATCTGTTTAAGTGGACAACAAACTGTAATGATGATGACAAAACACCCACCACTCCCAAATTACTTTTTGAACAGAGAGATGGGGTCAACCAAAAATGGAGTAATCATGAACTTCAACATGCTAATGGAAATGGAAATGGGCCTGGTGGGATTCCCTTGGATTTCCCAAATCTCAAGAGCAATTTGAAGAAAAAGACTAATAAGGACAAGGAGAATTGTCCTTCAGAAACAAGGAAAGTGAACTGGCCTGATGCCCATGGAAAAAATATTGCTCATATCCAAGAGTTTGAACCAAGTGCATCAGGAGATGGGGAGCTTGAGGGAGTAAGGAACTCTTGTGTCTGCACAATTCAATAA

Protein sequence

MIMTLLFPNLFKWTTNCNDDDKTPTTPKLLFEQRDGVNQKWSNHELQHANGNGNGPGGIPLDFPNLKSNLKKKTNKDKENCPSETRKVNWPDAHGKNIAHIQEFEPSASGDGELEGVRNSCVCTIQ
Homology
BLAST of Sed0020601 vs. NCBI nr
Match: KAG6593791.1 (hypothetical protein SDJN03_13267, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 151.4 bits (381), Expect = 5.3e-33
Identity = 79/117 (67.52%), Postives = 92/117 (78.63%), Query Frame = 0

Query: 16   NCNDDDKTPT--TPKLLFEQRDGVNQKW-SNHELQHANGNGNGPGGIPLDFPNLKSNLKK 75
            N  +  KT T    + + E+RDGV QKW +NHELQ  +GNGNG  GI L+ PNLKSNLKK
Sbjct: 892  NKGEGSKTSTIFRSRSVEEKRDGVKQKWRNNHELQ--DGNGNGSNGIHLEIPNLKSNLKK 951

Query: 76   KT---NKDKENCPSETRKVNWPDAHGKNIAHIQEFEPSASGDGELEGVRNSCVCTIQ 127
            KT    +++E CP+ETRKVNWPDAHGK+IAHIQEF+PS SGDGELEGVRNSCVCTIQ
Sbjct: 952  KTKEKEEEEETCPTETRKVNWPDAHGKDIAHIQEFDPSVSGDGELEGVRNSCVCTIQ 1006

BLAST of Sed0020601 vs. NCBI nr
Match: KAG7026120.1 (hypothetical protein SDJN02_12619 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 151.4 bits (381), Expect = 5.3e-33
Identity = 79/117 (67.52%), Postives = 92/117 (78.63%), Query Frame = 0

Query: 16   NCNDDDKTPT--TPKLLFEQRDGVNQKW-SNHELQHANGNGNGPGGIPLDFPNLKSNLKK 75
            N  +  KT T    + + E+RDGV QKW +NHELQ  +GNGNG  GI L+ PNLKSNLKK
Sbjct: 906  NKGEGSKTSTIFRSRSVEEKRDGVKQKWRNNHELQ--DGNGNGSNGIHLEIPNLKSNLKK 965

Query: 76   KT---NKDKENCPSETRKVNWPDAHGKNIAHIQEFEPSASGDGELEGVRNSCVCTIQ 127
            KT    +++E CP+ETRKVNWPDAHGK+IAHIQEF+PS SGDGELEGVRNSCVCTIQ
Sbjct: 966  KTKEKEEEEETCPTETRKVNWPDAHGKDIAHIQEFDPSVSGDGELEGVRNSCVCTIQ 1020

BLAST of Sed0020601 vs. NCBI nr
Match: KAF3972265.1 (hypothetical protein CMV_004221 [Castanea mollissima])

HSP 1 Score: 108.2 bits (269), Expect = 5.2e-20
Identity = 57/99 (57.58%), Postives = 67/99 (67.68%), Query Frame = 0

Query: 32  EQRDGVNQKWSNHELQHANG----NGNGPGGIPLDFPNLKSNLKKKTNKDKENCPSETRK 91
           E+RDGV ++  NHEL+  NG      +G  G  ++ P LKSNLKK T  D      E RK
Sbjct: 51  EKRDGVMEELHNHELRLQNGGNYSRSSGSNGPHIEHPTLKSNLKKTTIVDGNQPRLEKRK 110

Query: 92  VNWPDAHGKNIAHIQEFEPSASGDGELEGVRNSCVCTIQ 127
           V+WPDAHGK+IAH+ EFEPS S DGEL GVRNSCVC IQ
Sbjct: 111 VSWPDAHGKDIAHVHEFEPSVSEDGELGGVRNSCVCAIQ 149

BLAST of Sed0020601 vs. NCBI nr
Match: XP_024931762.1 (uncharacterized protein LOC112492388 [Ziziphus jujuba])

HSP 1 Score: 104.4 bits (259), Expect = 7.4e-19
Identity = 57/132 (43.18%), Postives = 76/132 (57.58%), Query Frame = 0

Query: 12  KWTTNCNDDDKTPTTPKLL-------FEQRDGVNQKWSNHELQHA----------NGNGN 71
           K   N  +DD    +  ++        E++DGV ++  N+E +            N   +
Sbjct: 72  KGEENSKNDDNNDNSNSIISDKKQSVAEKKDGVKEEVDNNEARGCDSSSSNNGGRNSRSS 131

Query: 72  GPGGIPLDFPNLKSNLKKKTNKDKENCPSETRKVNWPDAHGKNIAHIQEFEPSASGDGEL 127
           G  G  ++  NLKSNLKK   ++     +E RKV+WPDAHGK+IAH+QEFEPS S DGEL
Sbjct: 132 GSNGPHIEHSNLKSNLKKAVVEENNQLRTERRKVSWPDAHGKDIAHVQEFEPSVSEDGEL 191

BLAST of Sed0020601 vs. NCBI nr
Match: EOY05362.1 (Uncharacterized protein TCM_020382 isoform 1 [Theobroma cacao])

HSP 1 Score: 103.6 bits (257), Expect = 1.3e-18
Identity = 60/109 (55.05%), Postives = 70/109 (64.22%), Query Frame = 0

Query: 32  EQRDGVNQKWSNHELQHANGNGNGPGG-------------IPLDFPNLKSNLKKKTNKDK 91
           E++DGV ++  N E Q  +   NG GG             I L  P  KSNLKK T  D+
Sbjct: 42  EKKDGVMEEVGNDESQGQDRISNGSGGSNSGCSGTYNGPHIEL-IPTRKSNLKKPTTVDQ 101

Query: 92  EN-CPSETRKVNWPDAHGKNIAHIQEFEPSASGDGELEGVRNSCVCTIQ 127
           EN   +E RKV+WPDAHGK+IAH+QEFEPS S DGELEGVRNSCVC IQ
Sbjct: 102 ENQLKTERRKVSWPDAHGKDIAHVQEFEPSVSDDGELEGVRNSCVCAIQ 149

BLAST of Sed0020601 vs. ExPASy TrEMBL
Match: A0A6P6GC85 (uncharacterized protein LOC112492388 OS=Ziziphus jujuba OX=326968 GN=LOC112492388 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 3.6e-19
Identity = 57/132 (43.18%), Postives = 76/132 (57.58%), Query Frame = 0

Query: 12  KWTTNCNDDDKTPTTPKLL-------FEQRDGVNQKWSNHELQHA----------NGNGN 71
           K   N  +DD    +  ++        E++DGV ++  N+E +            N   +
Sbjct: 72  KGEENSKNDDNNDNSNSIISDKKQSVAEKKDGVKEEVDNNEARGCDSSSSNNGGRNSRSS 131

Query: 72  GPGGIPLDFPNLKSNLKKKTNKDKENCPSETRKVNWPDAHGKNIAHIQEFEPSASGDGEL 127
           G  G  ++  NLKSNLKK   ++     +E RKV+WPDAHGK+IAH+QEFEPS S DGEL
Sbjct: 132 GSNGPHIEHSNLKSNLKKAVVEENNQLRTERRKVSWPDAHGKDIAHVQEFEPSVSEDGEL 191

BLAST of Sed0020601 vs. ExPASy TrEMBL
Match: A0A061ELW3 (Uncharacterized protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_020382 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 6.2e-19
Identity = 60/109 (55.05%), Postives = 70/109 (64.22%), Query Frame = 0

Query: 32  EQRDGVNQKWSNHELQHANGNGNGPGG-------------IPLDFPNLKSNLKKKTNKDK 91
           E++DGV ++  N E Q  +   NG GG             I L  P  KSNLKK T  D+
Sbjct: 42  EKKDGVMEEVGNDESQGQDRISNGSGGSNSGCSGTYNGPHIEL-IPTRKSNLKKPTTVDQ 101

Query: 92  EN-CPSETRKVNWPDAHGKNIAHIQEFEPSASGDGELEGVRNSCVCTIQ 127
           EN   +E RKV+WPDAHGK+IAH+QEFEPS S DGELEGVRNSCVC IQ
Sbjct: 102 ENQLKTERRKVSWPDAHGKDIAHVQEFEPSVSDDGELEGVRNSCVCAIQ 149

BLAST of Sed0020601 vs. ExPASy TrEMBL
Match: A0A2I4F605 (uncharacterized protein LOC108995885 OS=Juglans regia OX=51240 GN=LOC108995885 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 6.2e-19
Identity = 57/119 (47.90%), Postives = 73/119 (61.34%), Query Frame = 0

Query: 15  TNCNDDDKTPTTPKLLFEQRDGVNQKWSNHELQ-------HANGNGNGPGGIPLDFPNLK 74
           +N N ++    +P    ++ DG  +++ NHELQ        +N    G  G  ++ P LK
Sbjct: 18  SNSNSNNAKKQSPA---DKEDGAMERFHNHELQLQNKSNESSNCGRGGTNGPQVECPTLK 77

Query: 75  SNLKKKTNKDKENCPSETRKVNWPDAHGKNIAHIQEFEPSASGDGELEGVRNSCVCTIQ 127
           SNLKK+T  D      E RKV+W DAHGK+IAH+QEFEPS S DGEL GVRNSCVC IQ
Sbjct: 78  SNLKKRTTVDDNQQRIEKRKVSWLDAHGKDIAHVQEFEPSVSEDGELGGVRNSCVCAIQ 133

BLAST of Sed0020601 vs. ExPASy TrEMBL
Match: A0A7N2LXE2 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 3.1e-18
Identity = 53/88 (60.23%), Postives = 59/88 (67.05%), Query Frame = 0

Query: 43  NHELQHANG----NGNGPGGIPLDFPNLKSNLKKKTNKDKENCPSETRKVNWPDAHGKNI 102
           NHELQ  NG      +G  G  ++ P LKSNLKK T  D      E RKV+WPDAHGK+I
Sbjct: 6   NHELQLQNGGNYSRSSGSNGPHIEHPTLKSNLKKTTIVDGNQLRLEKRKVSWPDAHGKDI 65

Query: 103 AHIQEFEPSASGDGELEGVRNSCVCTIQ 127
           AH+ EFEPS S DGEL GVRNSCVC IQ
Sbjct: 66  AHVHEFEPSVSEDGELGGVRNSCVCAIQ 93

BLAST of Sed0020601 vs. ExPASy TrEMBL
Match: A0A5D2D9X9 (Uncharacterized protein (Fragment) OS=Gossypium darwinii OX=34276 GN=ES288_D02G038900v1 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.2e-17
Identity = 56/105 (53.33%), Postives = 71/105 (67.62%), Query Frame = 0

Query: 34  RDGVNQKWSN-------HELQHANG---NGNGPGGIPLD-FPNLKSNLKKKTNKDKEN-C 93
           +DGV ++  N       HE++  NG   + +G  G  ++  P LKSNLKK T  D+EN  
Sbjct: 61  KDGVMEEVGNDDELQLGHEIRVTNGGNCSSSGTNGPHMELIPTLKSNLKKATATDEENQL 120

Query: 94  PSETRKVNWPDAHGKNIAHIQEFEPSASGDGELEGVRNSCVCTIQ 127
            ++ RKV+WPDAHGK+IAH+QEFEPS S DGEL GVRNSCVC IQ
Sbjct: 121 KTQRRKVSWPDAHGKDIAHVQEFEPSVSDDGELGGVRNSCVCAIQ 165

BLAST of Sed0020601 vs. TAIR 10
Match: AT3G13480.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55475.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 46.6 bits (109), Expect = 1.7e-05
Identity = 26/60 (43.33%), Postives = 33/60 (55.00%), Query Frame = 0

Query: 66  LKSNLKKKTNKDKENCPSETRKVNWPDAHGKNIAHIQEFEPSASGDGELEGVRNSCVCTI 125
           LKS+LKK+     +    E +KV W D  GK +A I+EFE S   D   +G   SCVC I
Sbjct: 113 LKSSLKKEVLDSADGGRKEKKKVQWVDLMGKELAEIREFESSEEEDVRYDG-DQSCVCVI 171

BLAST of Sed0020601 vs. TAIR 10
Match: AT1G55475.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 45.8 bits (107), Expect = 2.9e-05
Identity = 36/112 (32.14%), Postives = 53/112 (47.32%), Query Frame = 0

Query: 14  TTNCNDDDKTPTTPKLLFEQRDGVNQKWSNHELQHANGNGNGPGGIPLDFPNLKSNLKKK 73
           +T+ +DDD      + + E  DG+       E+      G   G    D   LKS+L+K 
Sbjct: 18  STSDDDDDH-----EEILEHVDGLTNAEDREEVDAKEEEGQIVG----DTLTLKSSLRKV 77

Query: 74  TNKDKENCPSETRKVNWPDAHGKNIAHIQEFEPSASGDGELEGVRNSCVCTI 126
            +   E    E +KV W D  GK +A I+EFEPS   D + +  + +CVC I
Sbjct: 78  DSNSTEAEKREKKKVQWVDVIGKELAEIREFEPSDEDDIDSDRGK-TCVCII 119

BLAST of Sed0020601 vs. TAIR 10
Match: AT1G34010.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22790.2); Has 74 Blast hits to 74 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 44.3 bits (103), Expect = 8.5e-05
Identity = 29/74 (39.19%), Postives = 39/74 (52.70%), Query Frame = 0

Query: 66  LKSNLKKKT-----------NKDKENCPSETRKVNWPDAHGKNIAHIQEFEPSASGDGEL 125
           LKS+LKK++           ++D      + RKV WPD  G  IA ++EFEPS   + E 
Sbjct: 108 LKSSLKKRSFSDVVIGDDDVSRDGVVDHIDRRKVQWPDTCGIEIAEVREFEPSEVDESED 167

BLAST of Sed0020601 vs. TAIR 10
Match: AT1G22790.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34010.1); Has 67 Blast hits to 67 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 41.2 bits (95), Expect = 7.2e-04
Identity = 21/43 (48.84%), Postives = 26/43 (60.47%), Query Frame = 0

Query: 86  RKVNWPDAHGKNIAHIQEFEPSASG--DGELE-GVRNSCVCTI 126
           RKV WPDA G  +  ++EFEPS  G  D E E G + +C C I
Sbjct: 173 RKVQWPDACGSELTQVREFEPSEMGLSDEEWEVGRQRTCSCVI 215

BLAST of Sed0020601 vs. TAIR 10
Match: AT1G22790.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34010.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 41.2 bits (95), Expect = 7.2e-04
Identity = 21/43 (48.84%), Postives = 26/43 (60.47%), Query Frame = 0

Query: 86  RKVNWPDAHGKNIAHIQEFEPSASG--DGELE-GVRNSCVCTI 126
           RKV WPDA G  +  ++EFEPS  G  D E E G + +C C I
Sbjct: 173 RKVQWPDACGSELTQVREFEPSEMGLSDEEWEVGRQRTCSCVI 215

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6593791.15.3e-3367.52hypothetical protein SDJN03_13267, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7026120.15.3e-3367.52hypothetical protein SDJN02_12619 [Cucurbita argyrosperma subsp. argyrosperma][more]
KAF3972265.15.2e-2057.58hypothetical protein CMV_004221 [Castanea mollissima][more]
XP_024931762.17.4e-1943.18uncharacterized protein LOC112492388 [Ziziphus jujuba][more]
EOY05362.11.3e-1855.05Uncharacterized protein TCM_020382 isoform 1 [Theobroma cacao][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6P6GC853.6e-1943.18uncharacterized protein LOC112492388 OS=Ziziphus jujuba OX=326968 GN=LOC11249238... [more]
A0A061ELW36.2e-1955.05Uncharacterized protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_020382 PE=4 ... [more]
A0A2I4F6056.2e-1947.90uncharacterized protein LOC108995885 OS=Juglans regia OX=51240 GN=LOC108995885 P... [more]
A0A7N2LXE23.1e-1860.23Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
A0A5D2D9X91.2e-1753.33Uncharacterized protein (Fragment) OS=Gossypium darwinii OX=34276 GN=ES288_D02G0... [more]
Match NameE-valueIdentityDescription
AT3G13480.11.7e-0543.33unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G55475.12.9e-0532.14unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G34010.18.5e-0539.19unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G22790.17.2e-0448.84unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G22790.27.2e-0448.84unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..94
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..93
NoneNo IPR availablePANTHERPTHR33401:SF21SUBFAMILY NOT NAMEDcoord: 14..126
NoneNo IPR availablePANTHERPTHR33401LIGHT-HARVESTING COMPLEX-LIKE PROTEIN OHP2, CHLOROPLASTICcoord: 14..126

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0020601.1Sed0020601.1mRNA