Sed0020598 (gene) Chayote v1

Overview


Name	Sed0020598
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Location	LG04: 8996117 .. 8996895 (+)
RNA-Seq Expression	Sed0020598
Synteny	Sed0020598

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAATCGTTAGGGGATGATGTAGAGGTTAAACAAATTAGCAAACCAGAAACTTCAGCGGATGACGCAAATTTGACACATGACCATACTGATGTTGACAGTGAAGAGCTGGAAACAACGAATCAAGGGGACAGCGAAGCGGAGCACATAAAATCCTCACCTGCAGACATCGCAGTCGACCTTGTCGAGTCGCACACTCATGAAAGCGAAACAATCCCTGATAATCGGTTCGTGGAGCAACTAGAACAAGTCGTCTGCCCCACTGATGACCAAGAGGAAACAAGACACTTCAGTGAAGCAAACAATTCATCGCACCGTGGAGATGACGCTCAATTGACACCCCGTCAAGACGCTATTGATCCAAGCGGAGGCGAAGATGAAGATCCTGAGAGGGTAAACTCCAAAGATTAATTGGATATTGAACTAGGTGAAGAACGACCGTATGTAGAGAGTGATGGAAAAGAAGAAGAGAATCAGACATCTACTCTTAAGTACAAACTAAGCCTTCACCGGTGCCAAAGACGCAAAAACAACTAGAGGTGAGAAGGAAGAGAATTGAAGGAAGGTCTGTGGACGATTCACCGCTGCGAAAAAAGTTGAACAAGGGGAAGGAGCTTCAAGATATAGCCAAAGAGGTTCGCTTGATGGATGAGCAACAAGAAGCAATAGATGTAAATTTGCTCGACATCCAAACGAAACACTTCCTATTCGATCAAGGGTTCGATCCAGACTTCGAAGGAATGTCGGAACCCATACTTTGCCAAATAGTGTCGTAG

mRNA sequence

ATGGAGGAATCGTTAGGGGATGATGTAGAGGTTAAACAAATTAGCAAACCAGAAACTTCAGCGGATGACGCAAATTTGACACATGACCATACTGATGTTGACAGTGAAGAGCTGGAAACAACGAATCAAGGGGACAGCGAAGCGGAGCACATAAAATCCTCACCTGCAGACATCGCAGTCGACCTTGTCGAGTCGCACACTCATGAAAGCGAAACAATCCCTGATAATCGGTTCGTGGAGCAACTAGAACAAGTCGTCTGCCCCACTGATGACCAAGAGGAAACAAGACACTTCAGTGAAGCAAACAATTCATCGCACCGTGGAGATGACGCTCAATTGACACCCCGTCAAGACGCTATTGATCCAAGCGGAGGCGAAGATGAAGATCCTGAGAGGACGCAAAAACAACTAGAGGTGAGAAGGAAGAGAATTGAAGGAAGGTCTGTGGACGATTCACCGCTGCGAAAAAAGTTGAACAAGGGGAAGGAGCTTCAAGATATAGCCAAAGAGGTTCGCTTGATGGATGAGCAACAAGAAGCAATAGATGTAAATTTGCTCGACATCCAAACGAAACACTTCCTATTCGATCAAGGGTTCGATCCAGACTTCGAAGGAATGTCGGAACCCATACTTTGCCAAATAGTGTCGTAG

Coding sequence (CDS)

ATGGAGGAATCGTTAGGGGATGATGTAGAGGTTAAACAAATTAGCAAACCAGAAACTTCAGCGGATGACGCAAATTTGACACATGACCATACTGATGTTGACAGTGAAGAGCTGGAAACAACGAATCAAGGGGACAGCGAAGCGGAGCACATAAAATCCTCACCTGCAGACATCGCAGTCGACCTTGTCGAGTCGCACACTCATGAAAGCGAAACAATCCCTGATAATCGGTTCGTGGAGCAACTAGAACAAGTCGTCTGCCCCACTGATGACCAAGAGGAAACAAGACACTTCAGTGAAGCAAACAATTCATCGCACCGTGGAGATGACGCTCAATTGACACCCCGTCAAGACGCTATTGATCCAAGCGGAGGCGAAGATGAAGATCCTGAGAGGACGCAAAAACAACTAGAGGTGAGAAGGAAGAGAATTGAAGGAAGGTCTGTGGACGATTCACCGCTGCGAAAAAAGTTGAACAAGGGGAAGGAGCTTCAAGATATAGCCAAAGAGGTTCGCTTGATGGATGAGCAACAAGAAGCAATAGATGTAAATTTGCTCGACATCCAAACGAAACACTTCCTATTCGATCAAGGGTTCGATCCAGACTTCGAAGGAATGTCGGAACCCATACTTTGCCAAATAGTGTCGTAG

Protein sequence

MEESLGDDVEVKQISKPETSADDANLTHDHTDVDSEELETTNQGDSEAEHIKSSPADIAVDLVESHTHESETIPDNRFVEQLEQVVCPTDDQEETRHFSEANNSSHRGDDAQLTPRQDAIDPSGGEDEDPERTQKQLEVRRKRIEGRSVDDSPLRKKLNKGKELQDIAKEVRLMDEQQEAIDVNLLDIQTKHFLFDQGFDPDFEGMSEPILCQIVS

Homology

The following BLAST results are available for this feature:

BLAST of Sed0020598 vs.


Match Name	E-value	Identity	Description

BLAST of Sed0020598 vs.


Match Name	E-value	Identity	Description

BLAST of Sed0020598 vs.


Match Name	E-value	Identity	Description

BLAST of Sed0020598 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..157
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..157
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..76

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0020598.1	Sed0020598.1	mRNA