Sed0020567 (gene) Chayote v1

Overview
NameSed0020567
Typegene
OrganismSechium edule (Chayote v1)
DescriptionPrefoldin subunit 4
LocationLG08: 31186558 .. 31188597 (-)
RNA-Seq ExpressionSed0020567
SyntenySed0020567
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCTAGCTCCCCTTCCCTTCCCTCTTACCGCAGATTTCTTTGTCCTTCGTTTCACAACGGGCGATTGAGTGTTGAAACATGCAGCAGGTAAGCGAAACCCTAATCAAACTCGTTTCGAACCTACAAAAATATTCCCTTTTGTTTTCACAATGGCGTTCTTGCTGTTTAATGTGCGCAGGGCGGAGGATCTGAGATGGAGGTCACATGGGAGGACCAACAGCATATCAACCAATTTAGTAGGTTCAACAATCGCTTCCACGACCTTCAAGACGAGATTAGAGTCGCCAAGGTATCGACATTGCATATGGATTCACTATTTTGAGGATTTCGTCTTCTTTTTGCTCTTTACTTTCAGTTTCTGACCCGCTTTTCAACTCCCTGTGCTGAATTTCTGTTAGCATTTTCGATTGTGGTGGTTCTTGTTACCATTTCGTTTTCTATTTAGATTCCACTTTTGTGGTTACGGATGAGGCAATTCGACTCTAATGAGTTAATTGGGCAGAATCCTATCCAAGCCGAAAAAAGCCCTTTAGAAGGGATTACTGATTAGACATATCATGTGATCTGATAAAACTTCAAAACAGATTGATTAGCTCGCTGCTTTTTTTTTTTTTTTTGAAACAAGGGTAACCACGTCCGTCCCTAGGCCAGGCACTAGGAGACATCAAAGGTGTAATGACACAGTTGAGTCTCGAACTTGGAACGTTGAGGGGAGCATACTCTCAAACCCCAAGTCTTCAACCACTGTGCCACACCTTGGGGATAGATTAGCTCACTTTTAGTTTGTACAATGTGCCCGAGTGTCGAAGATGAGGTTTTGCTCGTGTCGGGGAGATCTGCGCGAGTTAGCAAGCTGGAAGCACCTATTCGAGTTTTAGATCCCGTAAGGCATGATTTTCTCTCCGTTCGACAAGGGTTTTGTCATTGTCTTCCCCCTCCTCCCTCTAGCCATATCCAATGGAGAGTTCTAGTACACGAGTTACATCTCCCAGATCCTCTTAGGATCCTAAGTTGGATGTTCAACTTCTCAATAGTTAGGCGTAGGACTTCTATTTTCCTTGTCAGTTTTTGTATATAGGCTCAAAAACTGAGTAACACTTTCATTTAATCAATGAAGATGTTTTTGTTTAATATGCATATAACCAAGATGTTTTCTTGCTTGCTTTGTTCTGATCCCCTGCTTTACTTTTTGGTGGTATTTGGGAGACTTTAGTTAGTGAAGTGATTCATCAATACTTGAACCTTGTGTCTACAATTGGCCCTGGAACCCAATATTAATTTGAGTGAGTGAGCATGGGATGACTTTTGAATGTAGCTCTTTTAAGGGATTTTATTATTTTCCAACGAACACTTGGGTAAAACTTCTAGTATATTACTTCCTCCATAAGCTTTTGTAAGTGCTTTTAAGGAGCATTTTAAAAACCACTTGTGGTTATGTAATCAACTACCATGACAACTATTGTATGCTTTTGGTTTGCTAAACACACTTCTGGTTATTGTAAATGTCATATTGAACTCACCTTTGATGGTTAATTTCCATAGGAGACAAATGATAACCTAGAGGATGCGAGTAATGAGTTGATTCTCAGTGACGAGGATGTGATTCGTTTCCATATTGGAGAAGTTTTTGCCCATGTACCGATGGAAGAAGTGGAAGGCAGGTTGGAAGGAATGAAAGAGGAGAATGTTAAGAACTTGGAGGTACTCGAGGAAGAAAAGGAAGCTATCGTGGCCGAGATGGCTAAGTTGAAGAAAATTCTGTACGGGAAGTTCAAAGAGTCCATCAATCTGGAGGATGATTGATAAAGATAAGTTTTTCAATTTTTTCTGAAGCTGTTTTGATTGCAAAATTTTCTTTTGATTTTGATATTGTATTCTCTCATGTTGTCCATTTAATATTGGAATGCACTGGCTTTTTTATTTGGGAAAGTGACCTGATAAAAAGTTGATGGTTTACCCTCAAGATCAATAGATGTTTGTAGTTATTAACTTGTTCTTCTTTGCAGTTATTAACTTGTTCTCTAAAGAGTTCAATTAGAG

mRNA sequence

GTCTAGCTCCCCTTCCCTTCCCTCTTACCGCAGATTTCTTTGTCCTTCGTTTCACAACGGGCGATTGAGTGTTGAAACATGCAGCAGGGCGGAGGATCTGAGATGGAGGTCACATGGGAGGACCAACAGCATATCAACCAATTTAGTAGGTTCAACAATCGCTTCCACGACCTTCAAGACGAGATTAGAGTCGCCAAGGAGACAAATGATAACCTAGAGGATGCGAGTAATGAGTTGATTCTCAGTGACGAGGATGTGATTCGTTTCCATATTGGAGAAGTTTTTGCCCATGTACCGATGGAAGAAGTGGAAGGCAGGTTGGAAGGAATGAAAGAGGAGAATGTTAAGAACTTGGAGGTACTCGAGGAAGAAAAGGAAGCTATCGTGGCCGAGATGGCTAAGTTGAAGAAAATTCTGTACGGGAAGTTCAAAGAGTCCATCAATCTGGAGGATGATTGATAAAGATAAGTTTTTCAATTTTTTCTGAAGCTGTTTTGATTGCAAAATTTTCTTTTGATTTTGATATTGTATTCTCTCATGTTGTCCATTTAATATTGGAATGCACTGGCTTTTTTATTTGGGAAAGTGACCTGATAAAAAGTTGATGGTTTACCCTCAAGATCAATAGATGTTTGTAGTTATTAACTTGTTCTTCTTTGCAGTTATTAACTTGTTCTCTAAAGAGTTCAATTAGAG

Coding sequence (CDS)

ATGCAGCAGGGCGGAGGATCTGAGATGGAGGTCACATGGGAGGACCAACAGCATATCAACCAATTTAGTAGGTTCAACAATCGCTTCCACGACCTTCAAGACGAGATTAGAGTCGCCAAGGAGACAAATGATAACCTAGAGGATGCGAGTAATGAGTTGATTCTCAGTGACGAGGATGTGATTCGTTTCCATATTGGAGAAGTTTTTGCCCATGTACCGATGGAAGAAGTGGAAGGCAGGTTGGAAGGAATGAAAGAGGAGAATGTTAAGAACTTGGAGGTACTCGAGGAAGAAAAGGAAGCTATCGTGGCCGAGATGGCTAAGTTGAAGAAAATTCTGTACGGGAAGTTCAAAGAGTCCATCAATCTGGAGGATGATTGA

Protein sequence

MQQGGGSEMEVTWEDQQHINQFSRFNNRFHDLQDEIRVAKETNDNLEDASNELILSDEDVIRFHIGEVFAHVPMEEVEGRLEGMKEENVKNLEVLEEEKEAIVAEMAKLKKILYGKFKESINLEDD
Homology
[Close]
BLAST of Sed0020567 vs. NCBI nr
Match: XP_023521156.1 (probable prefoldin subunit 4 [Cucurbita pepo subsp. pepo] >XP_023545585.1 probable prefoldin subunit 4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 216.1 bits (549), Expect = 1.8e-52
Identity = 111/126 (88.10%), Postives = 120/126 (95.24%), Query Frame = 0 

Query: 1   MQQGGGSEMEVTWEDQQHINQFSRFNNRFHDLQDEIRVAKETNDNLEDASNELILSDEDV 60
           MQQGGGSE EVTWEDQQ+IN+FSR NNRFH+L+DEIR AKETNDNLEDASNELILSDEDV
Sbjct: 1   MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDV 60

Query: 61  IRFHIGEVFAHVPMEEVEGRLEGMKEENVKNLEVLEEEKEAIVAEMAKLKKILYGKFKES 120
           IRFHIGEVFAHVP EEVEGRLE MKEENVKNLE LEEEK++IVA+MA+LKKILYGKFK+S
Sbjct: 61  IRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDS 120

Query: 121 INLEDD 127
           INLEDD
Sbjct: 121 INLEDD 126

[Close]
BLAST of Sed0020567 vs. NCBI nr
Match: XP_022946140.1 (probable prefoldin subunit 4 [Cucurbita moschata])

HSP 1 Score: 214.9 bits (546), Expect = 3.9e-52
Identity = 110/126 (87.30%), Postives = 120/126 (95.24%), Query Frame = 0 

Query: 1   MQQGGGSEMEVTWEDQQHINQFSRFNNRFHDLQDEIRVAKETNDNLEDASNELILSDEDV 60
           MQQGGGSE EVTWEDQQ+IN+FSR NNRFH+L+DEIR AKETNDNLEDASNELILSDED+
Sbjct: 1   MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDM 60

Query: 61  IRFHIGEVFAHVPMEEVEGRLEGMKEENVKNLEVLEEEKEAIVAEMAKLKKILYGKFKES 120
           IRFHIGEVFAHVP EEVEGRLE MKEENVKNLE LEEEK++IVA+MA+LKKILYGKFK+S
Sbjct: 61  IRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDS 120

Query: 121 INLEDD 127
           INLEDD
Sbjct: 121 INLEDD 126

[Close]
BLAST of Sed0020567 vs. NCBI nr
Match: KAG7030312.1 (putative prefoldin subunit 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 214.9 bits (546), Expect = 3.9e-52
Identity = 110/126 (87.30%), Postives = 120/126 (95.24%), Query Frame = 0 

Query: 1   MQQGGGSEMEVTWEDQQHINQFSRFNNRFHDLQDEIRVAKETNDNLEDASNELILSDEDV 60
           MQQGGGSE EVTWEDQQ+IN+FSR NNRFH+L+DEIR AKETNDNLEDASNELILSDED+
Sbjct: 53  MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDM 112

Query: 61  IRFHIGEVFAHVPMEEVEGRLEGMKEENVKNLEVLEEEKEAIVAEMAKLKKILYGKFKES 120
           IRFHIGEVFAHVP EEVEGRLE MKEENVKNLE LEEEK++IVA+MA+LKKILYGKFK+S
Sbjct: 113 IRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDS 172

Query: 121 INLEDD 127
           INLEDD
Sbjct: 173 INLEDD 178

[Close]
BLAST of Sed0020567 vs. NCBI nr
Match: KAG6599316.1 (putative prefoldin subunit 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 214.9 bits (546), Expect = 3.9e-52
Identity = 110/126 (87.30%), Postives = 120/126 (95.24%), Query Frame = 0 

Query: 1   MQQGGGSEMEVTWEDQQHINQFSRFNNRFHDLQDEIRVAKETNDNLEDASNELILSDEDV 60
           MQQGGGSE EVTWEDQQ+IN+FSR NNRFH+L+DEIR AKETNDNLEDASNELILSDED+
Sbjct: 53  MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDM 112

Query: 61  IRFHIGEVFAHVPMEEVEGRLEGMKEENVKNLEVLEEEKEAIVAEMAKLKKILYGKFKES 120
           IRFHIGEVFAHVP EEVEGRLE MKEENVKNLE LEEEK++IVA+MA+LKKILYGKFK+S
Sbjct: 113 IRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDS 172

Query: 121 INLEDD 127
           INLEDD
Sbjct: 173 INLEDD 178

[Close]
BLAST of Sed0020567 vs. NCBI nr
Match: XP_022999107.1 (probable prefoldin subunit 4 [Cucurbita maxima])

HSP 1 Score: 214.9 bits (546), Expect = 3.9e-52
Identity = 110/126 (87.30%), Postives = 120/126 (95.24%), Query Frame = 0 

Query: 1   MQQGGGSEMEVTWEDQQHINQFSRFNNRFHDLQDEIRVAKETNDNLEDASNELILSDEDV 60
           MQQGGGSE EVTWEDQQ+IN+FSR NNRFH+L+DEIR AKETNDNLEDASNELILSDEDV
Sbjct: 1   MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDV 60

Query: 61  IRFHIGEVFAHVPMEEVEGRLEGMKEENVKNLEVLEEEKEAIVAEMAKLKKILYGKFKES 120
           IRFHIGEVFAHVP EEVEGRLE MKEENVKNLE LEEEK++IVA+MA+LK+ILYGKFK+S
Sbjct: 61  IRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKRILYGKFKDS 120

Query: 121 INLEDD 127
           INLEDD
Sbjct: 121 INLEDD 126

[Close]
BLAST of Sed0020567 vs. ExPASy Swiss-Prot
Match: Q9M4C4 (Probable prefoldin subunit 4 OS=Avena fatua OX=4499 GN=VIP3 PE=2 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.3e-45
Identity = 92/126 (73.02%), Postives = 111/126 (88.10%), Query Frame = 0 

Query: 1   MQQGGGSEMEVTWEDQQHINQFSRFNNRFHDLQDEIRVAKETNDNLEDASNELILSDEDV 60
           MQQG G+E +VTWEDQQ+IN+F R NNRFH+L DEIR+AKE N+NLEDA NELIL DEDV
Sbjct: 1   MQQGDGTEAQVTWEDQQNINRFGRLNNRFHELTDEIRLAKEANENLEDAGNELILCDEDV 60

Query: 61  IRFHIGEVFAHVPMEEVEGRLEGMKEENVKNLEVLEEEKEAIVAEMAKLKKILYGKFKES 120
           +RF IGEVFAH+PM++VE RLE MKE+  K LE LEEEKE+I+A+MA+LKKILYGKFK++
Sbjct: 61  VRFQIGEVFAHMPMDDVEARLEQMKEDAAKKLERLEEEKESILAQMAELKKILYGKFKDA 120

Query: 121 INLEDD 127
           INLE+D
Sbjct: 121 INLEED 126

[Close]
BLAST of Sed0020567 vs. ExPASy Swiss-Prot
Match: Q9M4B5 (Probable prefoldin subunit 4 OS=Arabidopsis thaliana OX=3702 GN=AIP3 PE=1 SV=3)

HSP 1 Score: 164.9 bits (416), Expect = 6.1e-40
Identity = 87/129 (67.44%), Postives = 106/129 (82.17%), Query Frame = 0 

Query: 1   MQQGG---GSEMEVTWEDQQHINQFSRFNNRFHDLQDEIRVAKETNDNLEDASNELILSD 60
           MQQ G   GSEMEVTWEDQQ+IN FSR NNR HDL D+I+ AKE  +NLEDA NELIL+D
Sbjct: 1   MQQQGSKSGSEMEVTWEDQQNINIFSRLNNRVHDLDDDIKSAKEKCENLEDAGNELILAD 60

Query: 61  EDVIRFHIGEVFAHVPMEEVEGRLEGMKEENVKNLEVLEEEKEAIVAEMAKLKKILYGKF 120
           E+++RF IGEVFAHVP ++VE ++E MKE   K+LE LE+EKE+IV +MA LKK+LY KF
Sbjct: 61  EEMVRFQIGEVFAHVPRDDVETKIEEMKEATCKSLEKLEQEKESIVTQMAALKKVLYAKF 120

Query: 121 KESINLEDD 127
           K+SINLE+D
Sbjct: 121 KDSINLEED 129

[Close]
BLAST of Sed0020567 vs. ExPASy Swiss-Prot
Match: Q9NQP4 (Prefoldin subunit 4 OS=Homo sapiens OX=9606 GN=PFDN4 PE=1 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.8e-15
Identity = 51/128 (39.84%), Postives = 80/128 (62.50%), Query Frame = 0 

Query: 1   MQQGGGSEMEVTWEDQQHINQFSRFNNRFHDLQDEIRVAKETNDNLEDASNELILSDED- 60
           M++    ++ VT+EDQQ IN+F+R  +R  +L++EI V K+   NLEDA ++++L+D+D 
Sbjct: 5   MKKAAAEDVNVTFEDQQKINKFARNTSRITELKEEIEVKKKQLQNLEDACDDIMLADDDC 64

Query: 61  -VIRFHIGEVFAHVPMEEVEGRLEGMKEENVKNLEVLEEEKEAIVAEMAKLKKILYGKFK 120
            +I + IG+VF     EE +  LE  K+   + ++ LE   E+I   +A LK  LY KF 
Sbjct: 65  LMIPYQIGDVFISHSQEETQEMLEEAKKNLQEEIDALESRVESIQRVLADLKVQLYAKFG 124

Query: 121 ESINLEDD 127
            +INLE D
Sbjct: 125 SNINLEAD 132

[Close]
BLAST of Sed0020567 vs. ExPASy Swiss-Prot
Match: Q2TBR6 (Prefoldin subunit 4 OS=Bos taurus OX=9913 GN=PFDN4 PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.3e-15
Identity = 51/128 (39.84%), Postives = 79/128 (61.72%), Query Frame = 0 

Query: 1   MQQGGGSEMEVTWEDQQHINQFSRFNNRFHDLQDEIRVAKETNDNLEDASNELILSDED- 60
           M++    ++ VT+EDQQ IN+F+R  +R  +L++EI V K+   NLEDA  +++L+D+D 
Sbjct: 5   MKKAAAEDVNVTFEDQQKINKFARNTSRITELKEEIEVKKKQLQNLEDACEDIMLADDDC 64

Query: 61  -VIRFHIGEVFAHVPMEEVEGRLEGMKEENVKNLEVLEEEKEAIVAEMAKLKKILYGKFK 120
            +I + IG+VF     EE +  LE  K+   + ++ LE   E+I   +A LK  LY KF 
Sbjct: 65  LMIPYQIGDVFISHSQEETQEMLEEAKKNLQEEIDALESRVESIQRVLADLKVQLYAKFG 124

Query: 121 ESINLEDD 127
            +INLE D
Sbjct: 125 SNINLEAD 132

[Close]
BLAST of Sed0020567 vs. ExPASy Swiss-Prot
Match: P53900 (Prefoldin subunit 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=GIM3 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.7e-11
Identity = 44/125 (35.20%), Postives = 74/125 (59.20%), Query Frame = 0 

Query: 1   MQQGGGSEMEVTWEDQQHINQFSRFNNRFHDLQDEIRVAKETNDNLEDASNELILSDED- 60
           + QG  +  +VT+EDQQ IN+FS+   R   +  E+ + +E  + L+D S E+ L DED 
Sbjct: 4   LPQGQRNNTQVTFEDQQKINEFSKLIMRKDAIAQELSLQREEKEYLDDVSLEIELIDEDE 63

Query: 61  VIRFHIGEVFAHVPMEEVEGRLEGMKEENVKNLEVLEEEKEAIVAEMAKLKKILYGKFKE 120
            +++ +G++F  +   +V  +LE   E     +E LE+++  I + +  LK ILY KF +
Sbjct: 64  PVQYKVGDLFIFMKQSKVTAQLEKDAERLDNKIETLEDKQRDIDSRLDALKAILYAKFGD 123

Query: 121 SINLE 125
           +INLE
Sbjct: 124 NINLE 128

[Close]
BLAST of Sed0020567 vs. ExPASy TrEMBL
Match: A0A6J1K9X7 (Prefoldin subunit 4 OS=Cucurbita maxima OX=3661 GN=LOC111493587 PE=3 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.9e-52
Identity = 110/126 (87.30%), Postives = 120/126 (95.24%), Query Frame = 0 

Query: 1   MQQGGGSEMEVTWEDQQHINQFSRFNNRFHDLQDEIRVAKETNDNLEDASNELILSDEDV 60
           MQQGGGSE EVTWEDQQ+IN+FSR NNRFH+L+DEIR AKETNDNLEDASNELILSDEDV
Sbjct: 1   MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDV 60

Query: 61  IRFHIGEVFAHVPMEEVEGRLEGMKEENVKNLEVLEEEKEAIVAEMAKLKKILYGKFKES 120
           IRFHIGEVFAHVP EEVEGRLE MKEENVKNLE LEEEK++IVA+MA+LK+ILYGKFK+S
Sbjct: 61  IRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKRILYGKFKDS 120

Query: 121 INLEDD 127
           INLEDD
Sbjct: 121 INLEDD 126

[Close]
BLAST of Sed0020567 vs. ExPASy TrEMBL
Match: A0A6J1G2Y9 (Prefoldin subunit 4 OS=Cucurbita moschata OX=3662 GN=LOC111450309 PE=3 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.9e-52
Identity = 110/126 (87.30%), Postives = 120/126 (95.24%), Query Frame = 0 

Query: 1   MQQGGGSEMEVTWEDQQHINQFSRFNNRFHDLQDEIRVAKETNDNLEDASNELILSDEDV 60
           MQQGGGSE EVTWEDQQ+IN+FSR NNRFH+L+DEIR AKETNDNLEDASNELILSDED+
Sbjct: 1   MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDM 60

Query: 61  IRFHIGEVFAHVPMEEVEGRLEGMKEENVKNLEVLEEEKEAIVAEMAKLKKILYGKFKES 120
           IRFHIGEVFAHVP EEVEGRLE MKEENVKNLE LEEEK++IVA+MA+LKKILYGKFK+S
Sbjct: 61  IRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDS 120

Query: 121 INLEDD 127
           INLEDD
Sbjct: 121 INLEDD 126

[Close]
BLAST of Sed0020567 vs. ExPASy TrEMBL
Match: A0A0A0LFH2 (Prefoldin subunit 4 OS=Cucumis sativus OX=3659 GN=Csa_2G010310 PE=3 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 5.2e-50
Identity = 105/126 (83.33%), Postives = 119/126 (94.44%), Query Frame = 0 

Query: 1   MQQGGGSEMEVTWEDQQHINQFSRFNNRFHDLQDEIRVAKETNDNLEDASNELILSDEDV 60
           MQQGGGSE EVTWEDQQ+IN+FSR NNRFH+L+DEIR AKETN+NLEDASNELILSD+DV
Sbjct: 1   MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNENLEDASNELILSDDDV 60

Query: 61  IRFHIGEVFAHVPMEEVEGRLEGMKEENVKNLEVLEEEKEAIVAEMAKLKKILYGKFKES 120
           IRF IGEVFAH+P EEVEGRLE MKEENV+NLE L+EEK++IVA+MA+LKKILYGKFK+S
Sbjct: 61  IRFQIGEVFAHIPKEEVEGRLEQMKEENVENLEKLKEEKDSIVAQMAELKKILYGKFKDS 120

Query: 121 INLEDD 127
           INLEDD
Sbjct: 121 INLEDD 126

[Close]
BLAST of Sed0020567 vs. ExPASy TrEMBL
Match: A0A5D3D4H6 (Prefoldin subunit 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001560 PE=3 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 6.7e-50
Identity = 105/126 (83.33%), Postives = 119/126 (94.44%), Query Frame = 0 

Query: 1   MQQGGGSEMEVTWEDQQHINQFSRFNNRFHDLQDEIRVAKETNDNLEDASNELILSDEDV 60
           MQQGGGSE EVTWEDQQ+IN+FSR NNRFH+L+DEIR AKETNDNLEDASNELILSD+DV
Sbjct: 1   MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDDDV 60

Query: 61  IRFHIGEVFAHVPMEEVEGRLEGMKEENVKNLEVLEEEKEAIVAEMAKLKKILYGKFKES 120
           IRF IGEVFAH+P EEVEGRLE MKEENV++L+ LEEEK++IVA+MA+LKKILYGKFK+S
Sbjct: 61  IRFQIGEVFAHIPKEEVEGRLEQMKEENVEHLKKLEEEKDSIVAQMAELKKILYGKFKDS 120

Query: 121 INLEDD 127
           INLEDD
Sbjct: 121 INLEDD 126

[Close]
BLAST of Sed0020567 vs. ExPASy TrEMBL
Match: A0A1S3C216 (Prefoldin subunit 4 OS=Cucumis melo OX=3656 GN=LOC103496138 PE=3 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 6.7e-50
Identity = 105/126 (83.33%), Postives = 119/126 (94.44%), Query Frame = 0 

Query: 1   MQQGGGSEMEVTWEDQQHINQFSRFNNRFHDLQDEIRVAKETNDNLEDASNELILSDEDV 60
           MQQGGGSE EVTWEDQQ+IN+FSR NNRFH+L+DEIR AKETNDNLEDASNELILSD+DV
Sbjct: 1   MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDDDV 60

Query: 61  IRFHIGEVFAHVPMEEVEGRLEGMKEENVKNLEVLEEEKEAIVAEMAKLKKILYGKFKES 120
           IRF IGEVFAH+P EEVEGRLE MKEENV++L+ LEEEK++IVA+MA+LKKILYGKFK+S
Sbjct: 61  IRFQIGEVFAHIPKEEVEGRLEQMKEENVEHLKKLEEEKDSIVAQMAELKKILYGKFKDS 120

Query: 121 INLEDD 127
           INLEDD
Sbjct: 121 INLEDD 126

[Close]
BLAST of Sed0020567 vs. TAIR 10
Match: AT1G08780.1 (ABI3-interacting protein 3 )

HSP 1 Score: 164.9 bits (416), Expect = 4.3e-41
Identity = 87/129 (67.44%), Postives = 106/129 (82.17%), Query Frame = 0 

Query: 1   MQQGG---GSEMEVTWEDQQHINQFSRFNNRFHDLQDEIRVAKETNDNLEDASNELILSD 60
           MQQ G   GSEMEVTWEDQQ+IN FSR NNR HDL D+I+ AKE  +NLEDA NELIL+D
Sbjct: 1   MQQQGSKSGSEMEVTWEDQQNINIFSRLNNRVHDLDDDIKSAKEKCENLEDAGNELILAD 60

Query: 61  EDVIRFHIGEVFAHVPMEEVEGRLEGMKEENVKNLEVLEEEKEAIVAEMAKLKKILYGKF 120
           E+++RF IGEVFAHVP ++VE ++E MKE   K+LE LE+EKE+IV +MA LKK+LY KF
Sbjct: 61  EEMVRFQIGEVFAHVPRDDVETKIEEMKEATCKSLEKLEQEKESIVTQMAALKKVLYAKF 120

Query: 121 KESINLEDD 127
           K+SINLE+D
Sbjct: 121 KDSINLEED 129

The following BLAST results are available for this feature:
BLAST of Sed0020567 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023521156.11.8e-5288.10probable prefoldin subunit 4 [Cucurbita pepo subsp. pepo] >XP_023545585.1 probab... [more]
XP_022946140.13.9e-5287.30probable prefoldin subunit 4 [Cucurbita moschata][more]
KAG7030312.13.9e-5287.30putative prefoldin subunit 4, partial [Cucurbita argyrosperma subsp. argyrosperm... [more]
KAG6599316.13.9e-5287.30putative prefoldin subunit 4, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022999107.13.9e-5287.30probable prefoldin subunit 4 [Cucurbita maxima][more]
BLAST of Sed0020567 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M4C41.3e-4573.02Probable prefoldin subunit 4 OS=Avena fatua OX=4499 GN=VIP3 PE=2 SV=1[more]
Q9M4B56.1e-4067.44Probable prefoldin subunit 4 OS=Arabidopsis thaliana OX=3702 GN=AIP3 PE=1 SV=3[more]
Q9NQP41.8e-1539.84Prefoldin subunit 4 OS=Homo sapiens OX=9606 GN=PFDN4 PE=1 SV=1[more]
Q2TBR62.3e-1539.84Prefoldin subunit 4 OS=Bos taurus OX=9913 GN=PFDN4 PE=2 SV=1[more]
P539002.7e-1135.20Prefoldin subunit 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=... [more]
BLAST of Sed0020567 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1K9X71.9e-5287.30Prefoldin subunit 4 OS=Cucurbita maxima OX=3661 GN=LOC111493587 PE=3 SV=1[more]
A0A6J1G2Y91.9e-5287.30Prefoldin subunit 4 OS=Cucurbita moschata OX=3662 GN=LOC111450309 PE=3 SV=1[more]
A0A0A0LFH25.2e-5083.33Prefoldin subunit 4 OS=Cucumis sativus OX=3659 GN=Csa_2G010310 PE=3 SV=1[more]
A0A5D3D4H66.7e-5083.33Prefoldin subunit 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G... [more]
A0A1S3C2166.7e-5083.33Prefoldin subunit 4 OS=Cucumis melo OX=3656 GN=LOC103496138 PE=3 SV=1[more]
BLAST of Sed0020567 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G08780.14.3e-4167.44ABI3-interacting protein 3 [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 29..52
NoneNo IPR availableCOILSCoilCoilcoord: 85..112
NoneNo IPR availablePANTHERPTHR21100:SF10PREFOLDIN SUBUNIT 4coord: 1..126
NoneNo IPR availableSUPERFAMILY46579Prefoldincoord: 16..113
IPR016661Prefoldin, subunit 4PIRSFPIRSF016477Prefoldin_4coord: 1..125
e-value: 1.6E-39
score: 132.8
IPR016661Prefoldin, subunit 4PANTHERPTHR21100PREFOLDIN SUBUNIT 4coord: 1..126
IPR002777Prefoldin beta-likePFAMPF01920Prefoldin_2coord: 16..119
e-value: 2.4E-21
score: 75.7

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0020567.1Sed0020567.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
biological_process GO:0016567 protein ubiquitination
cellular_component GO:0005737 cytoplasm
cellular_component GO:0016272 prefoldin complex
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0051082 unfolded protein binding