Sed0020562 (gene) Chayote v1

Overview


Name	Sed0020562
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Pectate lyase
Location	LG10: 3888184 .. 3892418 (+)
RNA-Seq Expression	Sed0020562
Synteny	Sed0020562

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTTCTATTCCTCTTCTTCCTAGCCACAATCATCAACCCTTCCCATTCCACGCCCTACCCAAACAAGAGACTAACGCGCAATCCCATCGATGCATGTTGGCGCGCCAACCCCAACTGGGCAGCCAACCGTCGCGCCCTAGCCGACTGTGCAGCCGGTTTCGGCAAAGACGCAATAGGAGGCAAATTTGGGTCAATCTACGTGGTCACTGACCCGTCAGACGACCCCGAAAATCCAAAGCACGGAACCCTACGGTTCGGGGCGATCCAACCGCAGCCGTTGTGGATCGTGTTTGCAAGGAGCATGGTGATCACGCCGAAAAGAGAGCTGATGGTGAACAGCTACAAGACGATAGACGGGCGAGGAGCCAAGGTGGAGATTGCTTATGGCGCGTGCTTAACGATTCACAACGTGAGCCATGTGATTGTTCATGGGATCAGCATTCATGATTGTAAGCCTGGCAAGCCTGGGCTCGTGCGAAGCAGCCCTGACCATTGCGGCGAGCGGCAATGGTCCGATGGCGACGCCATTTCTATATTTAGCTCTACCCATGTTTGGATTGACCATTGCTATTTGGCTCGTTGCACTGATGGGCTCATTGATGTCATTCATGCTTCCAATGCTGTCACCATTTCCAACAATTACTTAACTCAACATGACAAAGTAGGTATTAATAAGAAGTTTCATCACAAAATTAAATTAATTAGGCTCATTTTGTTTCGTTTTGTTTTTTCTTTCTAGTTTTTTATTTTTTGTTTTTAGTTTTAAAAAATAAAAATTGTATGTGTTTAATATTCATTCTTGATTTTTTCATAATTTTTTAAAAACAAAAACAATAATTTCTTAAGTTTTTAAAATTTCTTTATTATTTTAAAAACGTTTTAAAAATTTTTAAAACAAAAACAAAAATTCGTTATCAAACAAATTTGTTTTTACAAAAGTAAATACAAAAAAAAAAAACAAAAAATGAAATGATTATCAAACGAAGTCTTTATAATGAAGAGAATAACTCACATACTTTATAGAGTTGTTAACTCTTCACATATTTACGACACCTACTTAAACACCTATGATAACTATTAGATAGGATACAAAATTAATTAGTAATAAGAAAATAAATCACATATATATCTTATAAATATATTGAGATTATTATCAATTTTAAAAATATTAGATAATGTGAGGTTACATCTTAAAATTAATTGGTATTGAGGAAAGTAGCTGATCATATATTATATATAAAGATATTGAACACTTCTCACATTTTCAATATAAGACAATGTGAATATCTTTAACATGTCCTCTTTAGACATATGATCATGTAAGGAATGCCATCTTGAATTAGCCTAATTTGTGAACCGAAATACTCTCTTTGACCTTACTCATTTGGGTTGGATTAATCACCTGCTTACAATAACTTGCTCCAAGTCAAATTCAAATTTAAAGATTAAACACTCGTTTAAGTTTTTAAGTATTTGAGTTGGATCAAAATTTTGGAGATCAATACTCACATGGAACTAATGATAACATATTAAATAGTATGAGATTTCACTTTAATGCCAATTACGAAATAGAACTAAACATATGGATCAAATATAGTAAATAAAAATGATCATAGTCTCTGATTGTTGAATCAATATTACTCTTAATTAGGTGATCCTTCTTGGGCATAATGATGACTTTACAGCTGATAGAAATATGAGAGTTACTGTAGCATTCAATCGTTTTGGCGCTGGGCTTGTTCAAAGAATGCCCAGGTAAATTTGTTAAACAAATAAAGTTTTTTTTTTTTTTTTTTTATATACAAAAAATAAAGTTTTTTTTTTTTAATTTTTAATTCTTCACATAAAATTGCTTGAAAAATTGTAGGGTGAGACATGGGTATGCGCACGTTGCCAATAATTGGTACAACAAGTGGGAAATGTATGCTATGGGTGGCAGTGCCAATCCAACCATTTTCAGTCAAGGAAACTACTTCATAGCTCCTGATGAACAATGCTCCAAGCAGGTAATTAAATTAGTACTACCAAAATTCAACTCATTTGATAACGATTTTGTTTTTAGTTTTTCGTTTTTATAAATTTAAAACTACAACAACTATTTTATCCTAGGTTTTTTCTTACTTATATACCTACATTTTACCTTTAGTTTAAAACACCAAACCAAAATATAGAAGAAAAAAAATACCTTTCAAAAGTTTATTTTTGTTTGTCAAATTTTGTTAACATTTACGAGGGGTGTTCATAAATTCCCCAAAAACTGATTCGATCGATTGAAACCGACAGATTTGAGGGCGGTCGGTCGATGTCGGTTAAAAAAAAAATTAATCGAAATTTATTAGTTTGGTCGGTTGGTTCGTTAACCGACTTTATAAAATATGAGAATTTATCCTCCATAACATATTTTTTGTTTTTCATTATAATTATAGCACATTTTTAAAAATAATTTCATCCATAACACATTTTTTTAAAATAATTTCATTTATAACACATTTTATCCAAAATTGTTATTCTAACATCATCAGACTTTTATCAGTTTAACTGATAGACTTTAGACTTCTATCAGTTCAATTGATAGACTTCTATCGCTTCAACTAATAGACTTCTATCAATTCAACCGATATACTTTAGACTTCTATCAGTTGAACTGATAGACTTCAATCGATTTTGAGTGATTGAACAATGCAAATTGATAGACTTCAATCATTTTTGTGCCACAAATGAATAAGTTTGGGAATTGTGTTATACATGGATAATTATTTTGTTTTTTTTAATATACATGCAAAACCCCCTAAAATATTAATATTTTTCATATAATTAAATTGTTTATTACTAAATTATTACAAAATTAACTTAGATTTAAATATTTTTTCAAAAATTGTTTAAGATGTTCAAAATTTTAGAATTAATTCTTAAAATTTTATTAGAAAAATTATATGATTAATACGTTTTTTAATTAAAAAAAGGAAAGAAAATCAAATGAAATTAATCGACCTAACTAATCGACTTAACCAATTGATGTCATTTTGAAGTAAACCAGTAAGGTTGGTTCGGTGTCAATTTTCACCGAAAATCGATGCCAACCGACCAATGAATACCCTTAACATTCACATATTTTCATAAAAAAAATGGATATATTATAGAAAAGAATATTGTAACACTTTATACTAAATTGGAGTACAAATAATCCTAAATTTCAAAAATTAAAAATAAAAACTAAATGGTTATAGGCCTAAAGGCTTAGTTTAATATAGTTTTGATCTCACTTTTAGGATAAAGGAGACCAGTTTGTAGTTAAATGATAAATTGTTTTACTAAACCATCCTAAAAACTTTATTTTTGATGATTTAGAAATTGGGGCCGACTAATGGTAGACAACTTTTCGACTTAATAATTGAATTCACTACATAGGAAGAGTACATATACTGTTCAACGACAAAAGATTTTACAATTACATTGTTTTATCCAAGACCTTTAAAAAAGTAAATTTTGGAGACTTCAAATCTTTTATCAACAAGGTCGTTCTTAATGAACTCAATCAACATTTATTTCTTTTCTTTTTCTTTTTATTAAGAAAAGAAACTTGATTAACTAAACAAAACCAAACTATTACACTCTTTCGAAGTAGTAAATGTCTAGCCACATGAAAGATCCCTATAAAAATAAAAATATTTTTAGTGGTTCCATATAAAACCTACATCCACATTCATAATTGCAGAGATGAAATTTCATTCAAAGCGGTTCATCCTAAATGAACATTAAAAGGAAACCACAAAAATTTGGAAGCTCTAACTCTCTTAAATTCTAAATTCACATCATCTAAACCTCATATATATGACTTACCGTCACACAATTAGTGAAAGGTAAGACTCTAATGCATGATCAGATTATAAAATGTGATTCAAATTTAAAACTAACAATGGATTCTAACAAAACACACACTTATTTAGTGAGATCATTTTAACTCATTAATCTAACCCCAAAAGTTGAATGTAATTAACCATGTACTAGGTTACAAAGAGAGAGGTTTATGAGAGTGGATGGAGAAAATGGAAATGGAGGTCTTCAAATGATGTGTTTTTGAATGGTGCCTATTTTATCCCATCCGGTTGGGGAATTTGTGCGCCACTCTACACTCGGGCTCAAGCTTTTCGCGTGGCTCATGGCTCTATGGTTCCACTCTTGACCATCGCTGCTGGCCCTTTGACTTGTACTCTTGGTCAGCCTTGTTGA

mRNA sequence

ATGGCTTTTCTATTCCTCTTCTTCCTAGCCACAATCATCAACCCTTCCCATTCCACGCCCTACCCAAACAAGAGACTAACGCGCAATCCCATCGATGCATGTTGGCGCGCCAACCCCAACTGGGCAGCCAACCGTCGCGCCCTAGCCGACTGTGCAGCCGGTTTCGGCAAAGACGCAATAGGAGGCAAATTTGGGTCAATCTACGTGGTCACTGACCCGTCAGACGACCCCGAAAATCCAAAGCACGGAACCCTACGGTTCGGGGCGATCCAACCGCAGCCGTTGTGGATCGTGTTTGCAAGGAGCATGGTGATCACGCCGAAAAGAGAGCTGATGGTGAACAGCTACAAGACGATAGACGGGCGAGGAGCCAAGGTGGAGATTGCTTATGGCGCGTGCTTAACGATTCACAACGTGAGCCATGTGATTGTTCATGGGATCAGCATTCATGATTGTAAGCCTGGCAAGCCTGGGCTCGTGCGAAGCAGCCCTGACCATTGCGGCGAGCGGCAATGGTCCGATGGCGACGCCATTTCTATATTTAGCTCTACCCATGTTTGGATTGACCATTGCTATTTGGCTCGTTGCACTGATGGGCTCATTGATGTCATTCATGCTTCCAATGCTGTCACCATTTCCAACAATTACTTAACTCAACATGACAAAGTGATCCTTCTTGGGCATAATGATGACTTTACAGCTGATAGAAATATGAGAGTTACTGTAGCATTCAATCGTTTTGGCGCTGGGCTTGTTCAAAGAATGCCCAGGGTGAGACATGGGTATGCGCACGTTGCCAATAATTGGTACAACAAGTGGGAAATGTATGCTATGGGTGGCAGTGCCAATCCAACCATTTTCAGTCAAGGAAACTACTTCATAGCTCCTGATGAACAATGCTCCAAGCAGGTTACAAAGAGAGAGGTTTATGAGAGTGGATGGAGAAAATGGAAATGGAGGTCTTCAAATGATGTGTTTTTGAATGGTGCCTATTTTATCCCATCCGGTTGGGGAATTTGTGCGCCACTCTACACTCGGGCTCAAGCTTTTCGCGTGGCTCATGGCTCTATGGTTCCACTCTTGACCATCGCTGCTGGCCCTTTGACTTGTACTCTTGGTCAGCCTTGTTGA

Coding sequence (CDS)

ATGGCTTTTCTATTCCTCTTCTTCCTAGCCACAATCATCAACCCTTCCCATTCCACGCCCTACCCAAACAAGAGACTAACGCGCAATCCCATCGATGCATGTTGGCGCGCCAACCCCAACTGGGCAGCCAACCGTCGCGCCCTAGCCGACTGTGCAGCCGGTTTCGGCAAAGACGCAATAGGAGGCAAATTTGGGTCAATCTACGTGGTCACTGACCCGTCAGACGACCCCGAAAATCCAAAGCACGGAACCCTACGGTTCGGGGCGATCCAACCGCAGCCGTTGTGGATCGTGTTTGCAAGGAGCATGGTGATCACGCCGAAAAGAGAGCTGATGGTGAACAGCTACAAGACGATAGACGGGCGAGGAGCCAAGGTGGAGATTGCTTATGGCGCGTGCTTAACGATTCACAACGTGAGCCATGTGATTGTTCATGGGATCAGCATTCATGATTGTAAGCCTGGCAAGCCTGGGCTCGTGCGAAGCAGCCCTGACCATTGCGGCGAGCGGCAATGGTCCGATGGCGACGCCATTTCTATATTTAGCTCTACCCATGTTTGGATTGACCATTGCTATTTGGCTCGTTGCACTGATGGGCTCATTGATGTCATTCATGCTTCCAATGCTGTCACCATTTCCAACAATTACTTAACTCAACATGACAAAGTGATCCTTCTTGGGCATAATGATGACTTTACAGCTGATAGAAATATGAGAGTTACTGTAGCATTCAATCGTTTTGGCGCTGGGCTTGTTCAAAGAATGCCCAGGGTGAGACATGGGTATGCGCACGTTGCCAATAATTGGTACAACAAGTGGGAAATGTATGCTATGGGTGGCAGTGCCAATCCAACCATTTTCAGTCAAGGAAACTACTTCATAGCTCCTGATGAACAATGCTCCAAGCAGGTTACAAAGAGAGAGGTTTATGAGAGTGGATGGAGAAAATGGAAATGGAGGTCTTCAAATGATGTGTTTTTGAATGGTGCCTATTTTATCCCATCCGGTTGGGGAATTTGTGCGCCACTCTACACTCGGGCTCAAGCTTTTCGCGTGGCTCATGGCTCTATGGTTCCACTCTTGACCATCGCTGCTGGCCCTTTGACTTGTACTCTTGGTCAGCCTTGTTGA

Protein sequence

MAFLFLFFLATIINPSHSTPYPNKRLTRNPIDACWRANPNWAANRRALADCAAGFGKDAIGGKFGSIYVVTDPSDDPENPKHGTLRFGAIQPQPLWIVFARSMVITPKRELMVNSYKTIDGRGAKVEIAYGACLTIHNVSHVIVHGISIHDCKPGKPGLVRSSPDHCGERQWSDGDAISIFSSTHVWIDHCYLARCTDGLIDVIHASNAVTISNNYLTQHDKVILLGHNDDFTADRNMRVTVAFNRFGAGLVQRMPRVRHGYAHVANNWYNKWEMYAMGGSANPTIFSQGNYFIAPDEQCSKQVTKREVYESGWRKWKWRSSNDVFLNGAYFIPSGWGICAPLYTRAQAFRVAHGSMVPLLTIAAGPLTCTLGQPC

Homology

[Close]

BLAST of Sed0020562 vs. NCBI nr
Match: XP_008440030.1 (PREDICTED: putative pectate lyase 2 [Cucumis melo] >TYK13026.1 putative pectate lyase 2 [Cucumis melo var. makuwa])

HSP 1 Score: 645.2 bits (1663), Expect = 3.5e-181
Identity = 302/373 (80.97%), Postives = 328/373 (87.94%), Query Frame = 0


Query: 4   LFLFFLATIINPSHSTPYPNKRLTRNPIDACWRANPNWAANRRALADCAAGFGKDAIGGK 63
           +FL FL TII+      Y +K ++ NPIDACWR NPNWAANRRALADCA GFG DA+GGK
Sbjct: 10  IFLSFLPTIISTPKPNNYYDKPISLNPIDACWRNNPNWAANRRALADCAVGFGSDALGGK 69

Query: 64  FGSIYVVTDPSDDPENPKHGTLRFGAIQPQPLWIVFARSMVITPKRELMVNSYKTIDGRG 123
           FGSIYVVTDPSDDPE P+ GTLRFG IQ +PLWIVFAR M IT KRELMVNS+KTIDGRG
Sbjct: 70  FGSIYVVTDPSDDPEYPEPGTLRFGVIQLKPLWIVFARDMAITLKRELMVNSFKTIDGRG 129

Query: 124 AKVEIAYGACLTIHNVSHVIVHGISIHDCKPGKPGLVRSSPDHCGERQWSDGDAISIFSS 183
           AKVEI+ G C+TI NVSHVI+HGISIHDCKPGKPG VRS+  HCG+RQ SDGDAISIFSS
Sbjct: 130 AKVEISNGPCVTIQNVSHVIIHGISIHDCKPGKPGRVRSTVTHCGDRQESDGDAISIFSS 189

Query: 184 THVWIDHCYLARCTDGLIDVIHASNAVTISNNYLTQHDKVILLGHNDDFTADRNMRVTVA 243
           +H+WIDHCYLARCTDGLIDVIHAS AVTISNNY +QHDKVILLGHND+F  DR MRVTVA
Sbjct: 190 SHIWIDHCYLARCTDGLIDVIHASTAVTISNNYFSQHDKVILLGHNDEFRDDRIMRVTVA 249

Query: 244 FNRFGAGLVQRMPRVRHGYAHVANNWYNKWEMYAMGGSANPTIFSQGNYFIAPDEQCSKQ 303
           FNRFGAGLVQRMPRVR GYAHVANNWYNKWEMYAMGGSA+PTIFSQGNYF+APD+  SKQ
Sbjct: 250 FNRFGAGLVQRMPRVRFGYAHVANNWYNKWEMYAMGGSADPTIFSQGNYFMAPDDPFSKQ 309

Query: 304 VTKREVYESGWRKWKWRSSNDVFLNGAYFIPSGWGICAPLYTRAQAFRVAHGSMVPLLTI 363
           VTKREVYESGW+ WKWRSSNDVF+NGAYFIP+GWG C P YTRAQAF VAHGS+ PLLTI
Sbjct: 310 VTKREVYESGWKTWKWRSSNDVFMNGAYFIPTGWGSCTPFYTRAQAFPVAHGSLAPLLTI 369

Query: 364 AAGPLTCTLGQPC 377
           AAGPL C L +PC
Sbjct: 370 AAGPLPCVLAKPC 382

[Close]

BLAST of Sed0020562 vs. NCBI nr
Match: XP_004134978.2 (putative pectate lyase 2 [Cucumis sativus] >KGN49481.2 hypothetical protein Csa_004106 [Cucumis sativus])

HSP 1 Score: 642.9 bits (1657), Expect = 1.7e-180
Identity = 305/375 (81.33%), Postives = 328/375 (87.47%), Query Frame = 0


Query: 5   FLFFLATIINPSHSTPYPNKRLTR---NPIDACWRANPNWAANRRALADCAAGFGKDAIG 64
           FLFFL T+I    STP PN   ++   NPIDACWR N NWAANRRALADCA GFG DA+G
Sbjct: 10  FLFFLPTVI----STPKPNNYYSKPSLNPIDACWRNNRNWAANRRALADCAVGFGSDALG 69

Query: 65  GKFGSIYVVTDPSDDPENPKHGTLRFGAIQPQPLWIVFARSMVITPKRELMVNSYKTIDG 124
           GKFGSIYVVTDPSDDPE P+ GTLRFG IQ QPLWIVFAR MVIT KRELMVNSYKTIDG
Sbjct: 70  GKFGSIYVVTDPSDDPEYPEPGTLRFGVIQMQPLWIVFARDMVITLKRELMVNSYKTIDG 129

Query: 125 RGAKVEIAYGACLTIHNVSHVIVHGISIHDCKPGKPGLVRSSPDHCGERQWSDGDAISIF 184
           RGA VEI+ G C+TI NVSHVI+HGISIHDCKPGKPG VRSS  HCG+RQ SDGDAISIF
Sbjct: 130 RGANVEISNGPCITIQNVSHVIIHGISIHDCKPGKPGRVRSSVTHCGDRQQSDGDAISIF 189

Query: 185 SSTHVWIDHCYLARCTDGLIDVIHASNAVTISNNYLTQHDKVILLGHNDDFTADRNMRVT 244
           SS+H+WIDHCYLARCTDGLIDVIHAS AVTISNNY +QHDKVILLGHND+F  DR MRVT
Sbjct: 190 SSSHIWIDHCYLARCTDGLIDVIHASTAVTISNNYFSQHDKVILLGHNDEFRDDRIMRVT 249

Query: 245 VAFNRFGAGLVQRMPRVRHGYAHVANNWYNKWEMYAMGGSANPTIFSQGNYFIAPDEQCS 304
           VAFNRFGAGLVQRMPRVR GYAHVANNWYNKWEMYAMGGSA+PTIFSQGNYF+AP++  S
Sbjct: 250 VAFNRFGAGLVQRMPRVRFGYAHVANNWYNKWEMYAMGGSADPTIFSQGNYFMAPNDPFS 309

Query: 305 KQVTKREVYESGWRKWKWRSSNDVFLNGAYFIPSGWGICAPLYTRAQAFRVAHGSMVPLL 364
           KQVTKREVYESGW+ WKWRSSNDVF+NGAYFIP+GWG C P YT+AQAF VAHGS+ PLL
Sbjct: 310 KQVTKREVYESGWKSWKWRSSNDVFMNGAYFIPTGWGSCTPFYTQAQAFPVAHGSLAPLL 369

Query: 365 TIAAGPLTCTLGQPC 377
           TIAAGPL C L +PC
Sbjct: 370 TIAAGPLRCVLAKPC 380

[Close]

BLAST of Sed0020562 vs. NCBI nr
Match: XP_038882226.1 (putative pectate lyase 2 [Benincasa hispida])

HSP 1 Score: 631.3 bits (1627), Expect = 5.2e-177
Identity = 299/371 (80.59%), Postives = 321/371 (86.52%), Query Frame = 0


Query: 6   LFFLATIINPSHSTPYPNKRLTRNPIDACWRANPNWAANRRALADCAAGFGKDAIGGKFG 65
           L FL TI + ++   Y NK    N IDACWR+NPNWAANRRALADCA GFG DAIGGKFG
Sbjct: 11  LIFLPTIFSTANPNNYYNKP-PLNLIDACWRSNPNWAANRRALADCAVGFGSDAIGGKFG 70

Query: 66  SIYVVTDPSDDPENPKHGTLRFGAIQPQPLWIVFARSMVITPKRELMVNSYKTIDGRGAK 125
           SIYVVTDPSDDPE P+ GTLRFG IQPQPLWIVFAR MVIT KRELMVNS+KTIDGRGAK
Sbjct: 71  SIYVVTDPSDDPEYPEPGTLRFGVIQPQPLWIVFARDMVITLKRELMVNSFKTIDGRGAK 130

Query: 126 VEIAYGACLTIHNVSHVIVHGISIHDCKPGKPGLVRSSPDHCGERQWSDGDAISIFSSTH 185
           VEI+ G C+TI NVSHVI+HGISIHDCKP KPG VRS+  HCG+RQ SDGDAISIFSS+H
Sbjct: 131 VEISNGPCITIQNVSHVIIHGISIHDCKPAKPGRVRSTVTHCGDRQQSDGDAISIFSSSH 190

Query: 186 VWIDHCYLARCTDGLIDVIHASNAVTISNNYLTQHDKVILLGHNDDFTADRNMRVTVAFN 245
           +WIDHC LARCTDGLIDVIHAS AVTISNNY +QHDKVILLGHND+FT DR MRVTVAFN
Sbjct: 191 IWIDHCSLARCTDGLIDVIHASTAVTISNNYFSQHDKVILLGHNDEFTDDRIMRVTVAFN 250

Query: 246 RFGAGLVQRMPRVRHGYAHVANNWYNKWEMYAMGGSANPTIFSQGNYFIAPDEQCSKQVT 305
           RFGAGLVQRMPRVR GYAHVANNWYNKWEMYAMGGSA+PTIFSQGNYF+APD+  SKQVT
Sbjct: 251 RFGAGLVQRMPRVRFGYAHVANNWYNKWEMYAMGGSADPTIFSQGNYFMAPDDPFSKQVT 310

Query: 306 KREVYESGWRKWKWRSSNDVFLNGAYFIPSGWGICAPLYTRAQAFRVAHGSMVPLLTIAA 365
           KREVY  GW+ WKWRSSNDVF+NGAYFI +GWG C P YTRAQAF VAHGS  PLLT  A
Sbjct: 311 KREVYAGGWKNWKWRSSNDVFMNGAYFIQTGWGSCTPFYTRAQAFPVAHGSFAPLLTQTA 370

Query: 366 GPLTCTLGQPC 377
           G LTC LG+PC
Sbjct: 371 GTLTCVLGKPC 380

[Close]

BLAST of Sed0020562 vs. NCBI nr
Match: XP_022133314.1 (putative pectate lyase 2 [Momordica charantia])

HSP 1 Score: 631.3 bits (1627), Expect = 5.2e-177
Identity = 294/371 (79.25%), Postives = 328/371 (88.41%), Query Frame = 0


Query: 6   LFFLATIINPSHSTPYPNKRLTRNPIDACWRANPNWAANRRALADCAAGFGKDAIGGKFG 65
           LF LA +  PS S  Y +KR+  NPIDACWR+NP+WAA+RRALADCA GFGKDA+GGKFG
Sbjct: 12  LFLLAAL--PSPSRAYSDKRILLNPIDACWRSNPHWAADRRALADCAVGFGKDAMGGKFG 71

Query: 66  SIYVVTDPSDDPENPKHGTLRFGAIQPQPLWIVFARSMVITPKRELMVNSYKTIDGRGAK 125
            IYVVTDPSDD ENPK GTLRFGAIQPQPLWI+FAR MVI P+RELM++S+KTIDGRGA 
Sbjct: 72  VIYVVTDPSDDEENPKPGTLRFGAIQPQPLWIIFARDMVIRPRRELMLSSFKTIDGRGAH 131

Query: 126 VEIAYGACLTIHNVSHVIVHGISIHDCKPGKPGLVRSSPDHCGERQWSDGDAISIFSSTH 185
           VEIAYGAC+TI NVSHVI+HGISIHDCKPGK GLVRSS  H GERQ SDGDAIS+F+S+H
Sbjct: 132 VEIAYGACITIQNVSHVIIHGISIHDCKPGKAGLVRSSATHYGERQQSDGDAISVFASSH 191

Query: 186 VWIDHCYLARCTDGLIDVIHASNAVTISNNYLTQHDKVILLGHNDDFTADRNMRVTVAFN 245
           +WIDHC LARCTDGLIDVIHAS AVTISNNY +QHDKVILLGHND+FTAD+ MRVTVAFN
Sbjct: 192 IWIDHCSLARCTDGLIDVIHASTAVTISNNYFSQHDKVILLGHNDEFTADKIMRVTVAFN 251

Query: 246 RFGAGLVQRMPRVRHGYAHVANNWYNKWEMYAMGGSANPTIFSQGNYFIAPDEQCSKQVT 305
           RFG GLVQRMPRVR GY HVANNWYNKW+MYA+GGSA+PTIFSQGNYF+APD+  SKQVT
Sbjct: 252 RFGDGLVQRMPRVRFGYVHVANNWYNKWQMYAVGGSADPTIFSQGNYFMAPDDSFSKQVT 311

Query: 306 KREVYESGWRKWKWRSSNDVFLNGAYFIPSGWGICAPLYTRAQAFRVAHGSMVPLLTIAA 365
           KRE+   GW+KWKWRSSNDVFLNGAYFIPSGWG C PLYT AQ+F VAHGS+VP LT +A
Sbjct: 312 KREIDGFGWKKWKWRSSNDVFLNGAYFIPSGWGTCTPLYTPAQSFPVAHGSLVPFLTDSA 371

Query: 366 GPLTCTLGQPC 377
           GPL+C +G+ C
Sbjct: 372 GPLSCAVGKAC 380

[Close]

BLAST of Sed0020562 vs. NCBI nr
Match: KAG7033961.1 (putative pectate lyase 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 624.8 bits (1610), Expect = 4.9e-175
Identity = 297/376 (78.99%), Postives = 324/376 (86.17%), Query Frame = 0


Query: 4   LFLFFLATIIN-PSHSTPYPNK--RLTRNPIDACWRANPNWAANRRALADCAAGFGKDAI 63
           L LFFLATII  PS ST Y N   +L  NPIDACWR NPNWAANRRALADCA GFG DA+
Sbjct: 6   LSLFFLATIIRLPSPSTAYSNSYTKLALNPIDACWRTNPNWAANRRALADCAVGFGSDAL 65

Query: 64  GGKFGSIYVVTDPSDDPENPKHGTLRFGAIQPQPLWIVFARSMVITPKRELMVNSYKTID 123
           GGKFGSIYVV DPSDDPE PK GTLRFG IQ +PLWIVFAR MVIT +RELMVNS+KTID
Sbjct: 66  GGKFGSIYVVIDPSDDPEYPKPGTLRFGVIQAEPLWIVFARDMVITLERELMVNSFKTID 125

Query: 124 GRGAKVEIAYGACLTIHNVSHVIVHGISIHDCKPGKPGLVRSSPDHCGERQWSDGDAISI 183
           GRGAKVEI  G C+TI NVSHVI+HGI+I DCKP KPG VRSS  HCG+RQ SDGDAIS+
Sbjct: 126 GRGAKVEIGNGPCITIQNVSHVIIHGITIRDCKPAKPGRVRSSVTHCGDRQQSDGDAISV 185

Query: 184 FSSTHVWIDHCYLARCTDGLIDVIHASNAVTISNNYLTQHDKVILLGHNDDFTADRNMRV 243
           FSS+H+WIDHC LA CTDGLIDVIHAS AVTISNNY +QHDKVILLGHND+FTADR MRV
Sbjct: 186 FSSSHIWIDHCSLASCTDGLIDVIHASTAVTISNNYFSQHDKVILLGHNDEFTADRIMRV 245

Query: 244 TVAFNRFGAGLVQRMPRVRHGYAHVANNWYNKWEMYAMGGSANPTIFSQGNYFIAPDEQC 303
           TVAFNRFG GLVQRMPRVR GYAHVANNWY+KWEMYA+GGSA+P IFSQGNYF APD+  
Sbjct: 246 TVAFNRFGDGLVQRMPRVRFGYAHVANNWYHKWEMYAVGGSADPKIFSQGNYFDAPDDSS 305

Query: 304 SKQVTKREVYESGWRKWKWRSSNDVFLNGAYFIPSGWGICAPLYTRAQAFRVAHGSMVPL 363
           SKQVTKREVY +GW+KWKWRSSNDVF+NGAYFIPSGWG C P+YTR QAF VAHGS+ PL
Sbjct: 306 SKQVTKREVYVNGWKKWKWRSSNDVFVNGAYFIPSGWGSCTPIYTRDQAFPVAHGSLAPL 365

Query: 364 LTIAAGPLTCTLGQPC 377
           LT +AG L+C +G+ C
Sbjct: 366 LTDSAGALSCVVGKAC 381

[Close]

BLAST of Sed0020562 vs. ExPASy Swiss-Prot
Match: O65388 (Putative pectate lyase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g11920 PE=3 SV=2)

HSP 1 Score: 554.3 bits (1427), Expect = 1.1e-156
Identity = 253/376 (67.29%), Postives = 305/376 (81.12%), Query Frame = 0


Query: 1   MAFLFLFFLATIINPSHSTPYPNKRLTRNPIDACWRANPNWAANRRALADCAAGFGKDAI 60
           ++ LF  F ++++  ++S  Y   +L  NPID+CWR NP WA+NRRALADCA GFGK A+
Sbjct: 9   ISLLFAAFSSSVVEAAYSNGYTIPKLLPNPIDSCWRRNPYWASNRRALADCAVGFGKSAV 68

Query: 61  GGKFGSIYVVTDPSDDPENPKHGTLRFGAIQPQPLWIVFARSMVITPKRELMVNSYKTID 120
           GGK+GSIYVVT+PSDDPENP+ GTLR+  IQ +PLWI FAR MVI  + EL++NSYKTID
Sbjct: 69  GGKYGSIYVVTNPSDDPENPRPGTLRYAVIQSKPLWITFARDMVIVLRNELIMNSYKTID 128

Query: 121 GRGAKVEIAYGACLTIHNVSHVIVHGISIHDCKPGKPGLVRSSPDHCGERQWSDGDAISI 180
           GRGAKVEIAYG C+TI +VSHVI+HGISIHDCKPGK G VRSSP H G R+ SDGDAI+I
Sbjct: 129 GRGAKVEIAYGPCITIQHVSHVIIHGISIHDCKPGKSGRVRSSPTHVGSRKGSDGDAIAI 188

Query: 181 FSSTHVWIDHCYLARCTDGLIDVIHASNAVTISNNYLTQHDKVILLGHNDDFTADRNMRV 240
           F S+H+WIDHC+ +RC DGLIDV+HAS AVTISNNY TQHDKV+LLGHND+   D+ MRV
Sbjct: 189 FDSSHIWIDHCFFSRCQDGLIDVLHASTAVTISNNYFTQHDKVMLLGHNDNNVEDKIMRV 248

Query: 241 TVAFNRFGAGLVQRMPRVRHGYAHVANNWYNKWEMYAMGGSANPTIFSQGNYFIAPDEQC 300
           T+AFN FG GL++RMPRVR GYAHVANN Y KW+MYA+GGSA+PTIFS+GNYF+A D+  
Sbjct: 249 TIAFNHFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSADPTIFSEGNYFVASDDPS 308

Query: 301 SKQVTKREVYESGWRKWKWRSSNDVFLNGAYFIPSGWGICAPLYTRAQAFRVAHGSMVPL 360
            KQVTKR      W++WKWR+S DVF NGAYF+PSG+G   PLY RA+ F V+HGS+VPL
Sbjct: 309 KKQVTKRIDSGYDWKRWKWRTSKDVFKNGAYFVPSGYGTVTPLYGRAERFPVSHGSLVPL 368

Query: 361 LTIAAGPLTCTLGQPC 377
           LT +AGPL C  G+ C
Sbjct: 369 LTSSAGPLHCYSGRIC 384

[Close]

BLAST of Sed0020562 vs. ExPASy Swiss-Prot
Match: O65456 (Probable pectate lyase 16 OS=Arabidopsis thaliana OX=3702 GN=At4g22080 PE=2 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 5.5e-145
Identity = 238/348 (68.39%), Postives = 283/348 (81.32%), Query Frame = 0


Query: 29  NPIDACWRANPNWAANRRALADCAAGFGKDAIGGKFGSIYVVTDPSDDPENPKHGTLRFG 88
           NP+D+CWR   +WAANR+ LADC  GFG   +GGK G++YVVT+P D+ +NP+ G+LR+G
Sbjct: 47  NPVDSCWRLKSDWAANRKDLADCVVGFGSSTLGGKKGNLYVVTNPYDNAQNPQPGSLRYG 106

Query: 89  AIQPQPLWIVFARSMVITPKRELMVNSYKTIDGRGAKVEIAYGACLTIHNVSHVIVHGIS 148
            IQ +PLWI FA+ MVIT + ELMVNSYKTIDGRGAKVEIAYG C+TI +V++VIVHGIS
Sbjct: 107 VIQAKPLWITFAKDMVITLENELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIVHGIS 166

Query: 149 IHDCKPGKPGLVRSSPDHCGERQWSDGDAISIFSSTHVWIDHCYLARCTDGLIDVIHASN 208
           IHDCKPGK G+VRSSP H G R+ SDGDAI+IF S+++WIDHCYLA CTDGLIDVIHAS 
Sbjct: 167 IHDCKPGKYGMVRSSPTHVGHRKGSDGDAIAIFGSSNIWIDHCYLASCTDGLIDVIHAST 226

Query: 209 AVTISNNYLTQHDKVILLGHNDDFTADRNMRVTVAFNRFGAGLVQRMPRVRHGYAHVANN 268
            +TISNNY TQHDKV+LLGHNDDF  D  M+VTVAFN FG GLV+RMPRVR GYAHVANN
Sbjct: 227 GITISNNYFTQHDKVMLLGHNDDFVQDVKMKVTVAFNHFGPGLVERMPRVRRGYAHVANN 286

Query: 269 WYNKWEMYAMGGSANPTIFSQGNYFIAPDEQCSKQVTKREVYESGWRKWKWRSSNDVFLN 328
            Y+KW MYA+GGSA+PTIFS+GNYFIA D+  SK+VTKREV + GW  W+WR+S DVF N
Sbjct: 287 RYDKWIMYAIGGSADPTIFSEGNYFIASDKSNSKEVTKREV-KGGWNNWRWRTSKDVFKN 346

Query: 329 GAYFIPSGWGICAPLYTRAQAFRVAHGSMVPLLTIAAGPLTCTLGQPC 377
           GAYF+PSG+G  +  Y+ AQ F VA G++VP LT  AGPL C    PC
Sbjct: 347 GAYFVPSGYGSISLPYSSAQRFTVAPGNLVPSLTADAGPLNCNRNGPC 393

[Close]

BLAST of Sed0020562 vs. ExPASy Swiss-Prot
Match: O65457 (Putative pectate lyase 17 OS=Arabidopsis thaliana OX=3702 GN=At4g22090 PE=3 SV=1)

HSP 1 Score: 513.1 bits (1320), Expect = 2.7e-144
Identity = 242/361 (67.04%), Postives = 284/361 (78.67%), Query Frame = 0


Query: 18  STPYP--NKRLTRNPIDACWRANPNWAANRRALADCAAGFGKDAIGGKFGSIYVVTDPSD 77
           + PYP    +   NP+D+CWR   +W  NR  LADCA GFG   +GGK G+IYVVT+P D
Sbjct: 34  AAPYPAEEPQNIMNPVDSCWRLKSDWDVNREDLADCAVGFGSSTLGGKKGNIYVVTNPYD 93

Query: 78  DPENPKHGTLRFGAIQPQPLWIVFARSMVITPKRELMVNSYKTIDGRGAKVEIAYGACLT 137
           + +NP  G+LR+G IQ +PLWI FA+ MVIT   ELMVNSYKTIDGRGAKVEIAYG C+T
Sbjct: 94  NAQNPHPGSLRYGVIQAKPLWITFAKDMVITLANELMVNSYKTIDGRGAKVEIAYGPCIT 153

Query: 138 IHNVSHVIVHGISIHDCKPGKPGLVRSSPDHCGERQWSDGDAISIFSSTHVWIDHCYLAR 197
           I +V++VIVHGISIHDCKPGK G VRSSP H G R+ SDGDAI+IF S++VWIDHCYLA 
Sbjct: 154 IQDVTNVIVHGISIHDCKPGKSGKVRSSPTHVGHRKGSDGDAITIFGSSNVWIDHCYLAS 213

Query: 198 CTDGLIDVIHASNAVTISNNYLTQHDKVILLGHNDDFTADRNMRVTVAFNRFGAGLVQRM 257
           CTDGLIDVIHAS A+TISNNY TQHDKV+LLGHND+F  D  M+VTVAFN FG GLV+RM
Sbjct: 214 CTDGLIDVIHASTAITISNNYFTQHDKVMLLGHNDNFVKDVKMKVTVAFNHFGPGLVERM 273

Query: 258 PRVRHGYAHVANNWYNKWEMYAMGGSANPTIFSQGNYFIAPDEQCSKQVTKREVYESGWR 317
           PRVR GYAHVANN Y+KW MYA+GGSA+PTIFS+GNYFIA D+  SK+VTKREV + GW 
Sbjct: 274 PRVRRGYAHVANNRYDKWIMYAIGGSADPTIFSEGNYFIASDKSYSKEVTKREV-KGGWN 333

Query: 318 KWKWRSSNDVFLNGAYFIPSGWGICAPLYTRAQAFRVAHGSMVPLLTIAAGPLTCTLGQP 377
            W+WR+SNDVF NGA+F+PSG+G     Y+ AQ F VA G++VP LT  AGPL C    P
Sbjct: 334 NWRWRTSNDVFKNGAFFVPSGYGSIPLPYSSAQRFTVAPGNLVPSLTADAGPLNCNRNGP 393

[Close]

BLAST of Sed0020562 vs. ExPASy Swiss-Prot
Match: Q9C8G4 (Probable pectate lyase 4 OS=Arabidopsis thaliana OX=3702 GN=At1g30350 PE=2 SV=1)

HSP 1 Score: 478.4 bits (1230), Expect = 7.4e-134
Identity = 229/376 (60.90%), Postives = 277/376 (73.67%), Query Frame = 0


Query: 1   MAFLFLFFLATIINPSHSTPYPNKRLTRNPIDACWRANPNWAANRRALADCAAGFGKDAI 60
           ++ L   F + ++  +HS      R++ NPIDACWR NP WA NR+ALA CA G+GK AI
Sbjct: 8   VSLLLAAFASPLLETAHSYNVTAPRVSLNPIDACWRRNPKWATNRQALAHCAVGYGKAAI 67

Query: 61  GGKFGSIYVVTDPSDDPENPKHGTLRFGAIQPQPLWIVFARSMVITPKRELMVNSYKTID 120
           GGK G IYVVT+PSD+P  P  GTLR+   QP+PLWI FAR MVI  K +LM+NSYKTID
Sbjct: 68  GGKNGPIYVVTNPSDNPTRPSPGTLRYAVSQPKPLWITFARDMVIVLKSQLMINSYKTID 127

Query: 121 GRGAKVEIAYGACLTIHNVSHVIVHGISIHDCKPGKPGLVRSSPDHCGERQWSDGDAISI 180
           GRGAKVEIA G CL I  V HVI+HGISIHDCK    G+              DGD I +
Sbjct: 128 GRGAKVEIANGPCLRIRQVKHVIIHGISIHDCKADPNGM--------------DGDGIRV 187

Query: 181 FSSTHVWIDHCYLARCTDGLIDVIHASNAVTISNNYLTQHDKVILLGHNDDFTADRNMRV 240
           F STHVWIDHC+L+RC DGLIDVI +S AVTISNNY TQHDKV+LLGH+D +  D++MRV
Sbjct: 188 FQSTHVWIDHCFLSRCHDGLIDVIVSSTAVTISNNYFTQHDKVMLLGHDDSYMGDKDMRV 247

Query: 241 TVAFNRFGAGLVQRMPRVRHGYAHVANNWYNKWEMYAMGGSANPTIFSQGNYFIAPDEQC 300
           T+AFN FG GL++RMPRVR GYAHVANN Y KW+MYA+GGSANP IFS+GNYF+AP+++ 
Sbjct: 248 TIAFNTFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSANPIIFSEGNYFVAPEKRS 307

Query: 301 SKQVTKREVYESGWRKWKWRSSNDVFLNGAYFIPSGWGICAPLYTRAQAFRVAHGSMVPL 360
           SKQVTKR +     ++WKW +S DVF+NGA+F P G  I  PLY   + FRVAHGS+VP 
Sbjct: 308 SKQVTKRMMAGPDSKRWKWGTSRDVFMNGAFFGPPG-VIVRPLYKGGEGFRVAHGSLVPS 367

Query: 361 LTIAAGPLTCTLGQPC 377
           LT +AGPL C +G+ C
Sbjct: 368 LTSSAGPLRCYVGRIC 368

[Close]

BLAST of Sed0020562 vs. ExPASy Swiss-Prot
Match: Q9LTZ0 (Putative pectate lyase 11 OS=Arabidopsis thaliana OX=3702 GN=At3g27400 PE=3 SV=2)

HSP 1 Score: 446.4 bits (1147), Expect = 3.1e-124
Identity = 207/352 (58.81%), Postives = 255/352 (72.44%), Query Frame = 0


Query: 27  TRNPIDACWRANPNWAANRRALADCAAGFGKDAIGGKFGSIYVVTDP-SDDPENPKHGTL 86
           T NPID CWR +PNW  NR+ LADCA GFGK+AIGG+ G IYVVTDP +DDP NP+ GTL
Sbjct: 62  TGNPIDDCWRCDPNWETNRQRLADCAIGFGKNAIGGRKGRIYVVTDPANDDPVNPRPGTL 121

Query: 87  RFGAIQPQPLWIVFARSMVITPKRELMVNSYKTIDGRGAKVEIAYGACLTIHNVSHVIVH 146
           R+   Q +PLWI+F R MVI  K+EL++ S+KTIDGRG+ V I  G CL IH  +++I+H
Sbjct: 122 RYAVTQEEPLWIIFKRDMVIRLKKELIITSFKTIDGRGSSVHITDGPCLKIHYATNIIIH 181

Query: 147 GISIHDCKPGKPGLVRSSPDHCGERQWSDGDAISIFSSTHVWIDHCYLARCTDGLIDVIH 206
           GI+IHDCKPG  G+++  P H G    SDGDA++IF   HVWIDHC L+ C DGLID IH
Sbjct: 182 GINIHDCKPGSGGMIKDGPHHTGWWMQSDGDAVAIFGGKHVWIDHCSLSNCDDGLIDAIH 241

Query: 207 ASNAVTISNNYLTQHDKVILLGHNDDFTADRNMRVTVAFNRFGAGLVQRMPRVRHGYAHV 266
            S A+TISNN++T HDKV+LLGH+D +T D+NM+VT+AFN FG GLVQRMPR RHGY HV
Sbjct: 242 GSTAITISNNHMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV 301

Query: 267 ANNWYNKWEMYAMGGSANPTIFSQGNYFIAPDEQCSKQVTKRE-VYESGWRKWKWRSSND 326
            NN Y  WEMYA+GGSA+PTI+SQGN F+AP+ + +K+VTK E   ES WR W WRS  D
Sbjct: 302 VNNDYTHWEMYAIGGSASPTIYSQGNRFLAPNTRFNKEVTKHEDAPESKWRDWNWRSEGD 361

Query: 327 VFLNGAYFIPSGWGICAPLYTRAQAFRVAHGSMVPLLTIAAGPLTCTLGQPC 377
           + LNGAYF  SG       Y RA +      S+V  +T  AG L+C  G+ C
Sbjct: 362 MLLNGAYFRESG-AEAPSTYARASSLSARPSSLVGSITTTAGTLSCRRGRRC 412

[Close]

BLAST of Sed0020562 vs. ExPASy TrEMBL
Match: A0A5D3CRJ6 (Pectate lyase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006270 PE=3 SV=1)

HSP 1 Score: 645.2 bits (1663), Expect = 1.7e-181
Identity = 302/373 (80.97%), Postives = 328/373 (87.94%), Query Frame = 0


Query: 4   LFLFFLATIINPSHSTPYPNKRLTRNPIDACWRANPNWAANRRALADCAAGFGKDAIGGK 63
           +FL FL TII+      Y +K ++ NPIDACWR NPNWAANRRALADCA GFG DA+GGK
Sbjct: 10  IFLSFLPTIISTPKPNNYYDKPISLNPIDACWRNNPNWAANRRALADCAVGFGSDALGGK 69

Query: 64  FGSIYVVTDPSDDPENPKHGTLRFGAIQPQPLWIVFARSMVITPKRELMVNSYKTIDGRG 123
           FGSIYVVTDPSDDPE P+ GTLRFG IQ +PLWIVFAR M IT KRELMVNS+KTIDGRG
Sbjct: 70  FGSIYVVTDPSDDPEYPEPGTLRFGVIQLKPLWIVFARDMAITLKRELMVNSFKTIDGRG 129

Query: 124 AKVEIAYGACLTIHNVSHVIVHGISIHDCKPGKPGLVRSSPDHCGERQWSDGDAISIFSS 183
           AKVEI+ G C+TI NVSHVI+HGISIHDCKPGKPG VRS+  HCG+RQ SDGDAISIFSS
Sbjct: 130 AKVEISNGPCVTIQNVSHVIIHGISIHDCKPGKPGRVRSTVTHCGDRQESDGDAISIFSS 189

Query: 184 THVWIDHCYLARCTDGLIDVIHASNAVTISNNYLTQHDKVILLGHNDDFTADRNMRVTVA 243
           +H+WIDHCYLARCTDGLIDVIHAS AVTISNNY +QHDKVILLGHND+F  DR MRVTVA
Sbjct: 190 SHIWIDHCYLARCTDGLIDVIHASTAVTISNNYFSQHDKVILLGHNDEFRDDRIMRVTVA 249

Query: 244 FNRFGAGLVQRMPRVRHGYAHVANNWYNKWEMYAMGGSANPTIFSQGNYFIAPDEQCSKQ 303
           FNRFGAGLVQRMPRVR GYAHVANNWYNKWEMYAMGGSA+PTIFSQGNYF+APD+  SKQ
Sbjct: 250 FNRFGAGLVQRMPRVRFGYAHVANNWYNKWEMYAMGGSADPTIFSQGNYFMAPDDPFSKQ 309

Query: 304 VTKREVYESGWRKWKWRSSNDVFLNGAYFIPSGWGICAPLYTRAQAFRVAHGSMVPLLTI 363
           VTKREVYESGW+ WKWRSSNDVF+NGAYFIP+GWG C P YTRAQAF VAHGS+ PLLTI
Sbjct: 310 VTKREVYESGWKTWKWRSSNDVFMNGAYFIPTGWGSCTPFYTRAQAFPVAHGSLAPLLTI 369

Query: 364 AAGPLTCTLGQPC 377
           AAGPL C L +PC
Sbjct: 370 AAGPLPCVLAKPC 382

[Close]

BLAST of Sed0020562 vs. ExPASy TrEMBL
Match: A0A1S3AZR0 (Pectate lyase OS=Cucumis melo OX=3656 GN=LOC103484628 PE=3 SV=1)

HSP 1 Score: 645.2 bits (1663), Expect = 1.7e-181
Identity = 302/373 (80.97%), Postives = 328/373 (87.94%), Query Frame = 0


Query: 4   LFLFFLATIINPSHSTPYPNKRLTRNPIDACWRANPNWAANRRALADCAAGFGKDAIGGK 63
           +FL FL TII+      Y +K ++ NPIDACWR NPNWAANRRALADCA GFG DA+GGK
Sbjct: 10  IFLSFLPTIISTPKPNNYYDKPISLNPIDACWRNNPNWAANRRALADCAVGFGSDALGGK 69

Query: 64  FGSIYVVTDPSDDPENPKHGTLRFGAIQPQPLWIVFARSMVITPKRELMVNSYKTIDGRG 123
           FGSIYVVTDPSDDPE P+ GTLRFG IQ +PLWIVFAR M IT KRELMVNS+KTIDGRG
Sbjct: 70  FGSIYVVTDPSDDPEYPEPGTLRFGVIQLKPLWIVFARDMAITLKRELMVNSFKTIDGRG 129

Query: 124 AKVEIAYGACLTIHNVSHVIVHGISIHDCKPGKPGLVRSSPDHCGERQWSDGDAISIFSS 183
           AKVEI+ G C+TI NVSHVI+HGISIHDCKPGKPG VRS+  HCG+RQ SDGDAISIFSS
Sbjct: 130 AKVEISNGPCVTIQNVSHVIIHGISIHDCKPGKPGRVRSTVTHCGDRQESDGDAISIFSS 189

Query: 184 THVWIDHCYLARCTDGLIDVIHASNAVTISNNYLTQHDKVILLGHNDDFTADRNMRVTVA 243
           +H+WIDHCYLARCTDGLIDVIHAS AVTISNNY +QHDKVILLGHND+F  DR MRVTVA
Sbjct: 190 SHIWIDHCYLARCTDGLIDVIHASTAVTISNNYFSQHDKVILLGHNDEFRDDRIMRVTVA 249

Query: 244 FNRFGAGLVQRMPRVRHGYAHVANNWYNKWEMYAMGGSANPTIFSQGNYFIAPDEQCSKQ 303
           FNRFGAGLVQRMPRVR GYAHVANNWYNKWEMYAMGGSA+PTIFSQGNYF+APD+  SKQ
Sbjct: 250 FNRFGAGLVQRMPRVRFGYAHVANNWYNKWEMYAMGGSADPTIFSQGNYFMAPDDPFSKQ 309

Query: 304 VTKREVYESGWRKWKWRSSNDVFLNGAYFIPSGWGICAPLYTRAQAFRVAHGSMVPLLTI 363
           VTKREVYESGW+ WKWRSSNDVF+NGAYFIP+GWG C P YTRAQAF VAHGS+ PLLTI
Sbjct: 310 VTKREVYESGWKTWKWRSSNDVFMNGAYFIPTGWGSCTPFYTRAQAFPVAHGSLAPLLTI 369

Query: 364 AAGPLTCTLGQPC 377
           AAGPL C L +PC
Sbjct: 370 AAGPLPCVLAKPC 382

[Close]

BLAST of Sed0020562 vs. ExPASy TrEMBL
Match: A0A6J1BVN3 (Pectate lyase OS=Momordica charantia OX=3673 GN=LOC111005923 PE=3 SV=1)

HSP 1 Score: 631.3 bits (1627), Expect = 2.5e-177
Identity = 294/371 (79.25%), Postives = 328/371 (88.41%), Query Frame = 0


Query: 6   LFFLATIINPSHSTPYPNKRLTRNPIDACWRANPNWAANRRALADCAAGFGKDAIGGKFG 65
           LF LA +  PS S  Y +KR+  NPIDACWR+NP+WAA+RRALADCA GFGKDA+GGKFG
Sbjct: 12  LFLLAAL--PSPSRAYSDKRILLNPIDACWRSNPHWAADRRALADCAVGFGKDAMGGKFG 71

Query: 66  SIYVVTDPSDDPENPKHGTLRFGAIQPQPLWIVFARSMVITPKRELMVNSYKTIDGRGAK 125
            IYVVTDPSDD ENPK GTLRFGAIQPQPLWI+FAR MVI P+RELM++S+KTIDGRGA 
Sbjct: 72  VIYVVTDPSDDEENPKPGTLRFGAIQPQPLWIIFARDMVIRPRRELMLSSFKTIDGRGAH 131

Query: 126 VEIAYGACLTIHNVSHVIVHGISIHDCKPGKPGLVRSSPDHCGERQWSDGDAISIFSSTH 185
           VEIAYGAC+TI NVSHVI+HGISIHDCKPGK GLVRSS  H GERQ SDGDAIS+F+S+H
Sbjct: 132 VEIAYGACITIQNVSHVIIHGISIHDCKPGKAGLVRSSATHYGERQQSDGDAISVFASSH 191

Query: 186 VWIDHCYLARCTDGLIDVIHASNAVTISNNYLTQHDKVILLGHNDDFTADRNMRVTVAFN 245
           +WIDHC LARCTDGLIDVIHAS AVTISNNY +QHDKVILLGHND+FTAD+ MRVTVAFN
Sbjct: 192 IWIDHCSLARCTDGLIDVIHASTAVTISNNYFSQHDKVILLGHNDEFTADKIMRVTVAFN 251

Query: 246 RFGAGLVQRMPRVRHGYAHVANNWYNKWEMYAMGGSANPTIFSQGNYFIAPDEQCSKQVT 305
           RFG GLVQRMPRVR GY HVANNWYNKW+MYA+GGSA+PTIFSQGNYF+APD+  SKQVT
Sbjct: 252 RFGDGLVQRMPRVRFGYVHVANNWYNKWQMYAVGGSADPTIFSQGNYFMAPDDSFSKQVT 311

Query: 306 KREVYESGWRKWKWRSSNDVFLNGAYFIPSGWGICAPLYTRAQAFRVAHGSMVPLLTIAA 365
           KRE+   GW+KWKWRSSNDVFLNGAYFIPSGWG C PLYT AQ+F VAHGS+VP LT +A
Sbjct: 312 KREIDGFGWKKWKWRSSNDVFLNGAYFIPSGWGTCTPLYTPAQSFPVAHGSLVPFLTDSA 371

Query: 366 GPLTCTLGQPC 377
           GPL+C +G+ C
Sbjct: 372 GPLSCAVGKAC 380

[Close]

BLAST of Sed0020562 vs. ExPASy TrEMBL
Match: A0A6J1INN6 (Pectate lyase OS=Cucurbita maxima OX=3661 GN=LOC111478069 PE=3 SV=1)

HSP 1 Score: 622.9 bits (1605), Expect = 9.0e-175
Identity = 296/376 (78.72%), Postives = 324/376 (86.17%), Query Frame = 0


Query: 4   LFLFFLATIIN-PSHSTPYPNK--RLTRNPIDACWRANPNWAANRRALADCAAGFGKDAI 63
           L LFFLATII   S ST Y N   +L  NPIDACWR+NPNWAANRRALA CA GFG DA+
Sbjct: 6   LSLFFLATIIRIHSPSTAYSNSYTKLALNPIDACWRSNPNWAANRRALAACAVGFGSDAL 65

Query: 64  GGKFGSIYVVTDPSDDPENPKHGTLRFGAIQPQPLWIVFARSMVITPKRELMVNSYKTID 123
           GGKFGSIYVV DPSDDPE PK GTLRFG IQ +PLWIVFAR MVITP+RELMVNS+KTID
Sbjct: 66  GGKFGSIYVVIDPSDDPEYPKPGTLRFGVIQEEPLWIVFARDMVITPERELMVNSFKTID 125

Query: 124 GRGAKVEIAYGACLTIHNVSHVIVHGISIHDCKPGKPGLVRSSPDHCGERQWSDGDAISI 183
           GRGAKVEI  G C+TI NVSHVI+HGI+I DCKP KPG VRSS  HCG+RQ SDGDAIS+
Sbjct: 126 GRGAKVEIGNGPCITIQNVSHVIIHGITIRDCKPAKPGRVRSSVTHCGDRQQSDGDAISV 185

Query: 184 FSSTHVWIDHCYLARCTDGLIDVIHASNAVTISNNYLTQHDKVILLGHNDDFTADRNMRV 243
           FSS+H+WIDHC LA CTDGLIDVIHAS AVTISNNY +QHDKVILLGHND+FTADR MRV
Sbjct: 186 FSSSHIWIDHCSLASCTDGLIDVIHASTAVTISNNYFSQHDKVILLGHNDEFTADRIMRV 245

Query: 244 TVAFNRFGAGLVQRMPRVRHGYAHVANNWYNKWEMYAMGGSANPTIFSQGNYFIAPDEQC 303
           TVAFNRFG GLVQRMPRVR GYAHVANNWY+KW+MYA+GGSA+P IFSQGNYF APD+  
Sbjct: 246 TVAFNRFGDGLVQRMPRVRFGYAHVANNWYHKWQMYAVGGSADPKIFSQGNYFDAPDDSS 305

Query: 304 SKQVTKREVYESGWRKWKWRSSNDVFLNGAYFIPSGWGICAPLYTRAQAFRVAHGSMVPL 363
           SKQVTKREVY +GW+KWKWRSSNDVF+NGAYFIPSGWG C P YTRAQAF VAHGS+ PL
Sbjct: 306 SKQVTKREVYVNGWKKWKWRSSNDVFVNGAYFIPSGWGSCTPFYTRAQAFPVAHGSLAPL 365

Query: 364 LTIAAGPLTCTLGQPC 377
           LT +AG L+C +G+ C
Sbjct: 366 LTDSAGALSCVVGKAC 381

[Close]

BLAST of Sed0020562 vs. ExPASy TrEMBL
Match: A0A6J1GF79 (Pectate lyase OS=Cucurbita moschata OX=3662 GN=LOC111453637 PE=3 SV=1)

HSP 1 Score: 622.1 bits (1603), Expect = 1.5e-174
Identity = 295/376 (78.46%), Postives = 323/376 (85.90%), Query Frame = 0


Query: 4   LFLFFLATIIN-PSHSTPYPNK--RLTRNPIDACWRANPNWAANRRALADCAAGFGKDAI 63
           L LFFLATII  PS ST Y N   +L  NP+DACWR  PNWAANRRALADCA GFG DA+
Sbjct: 6   LSLFFLATIIRLPSPSTAYSNSYTKLALNPVDACWRTKPNWAANRRALADCAVGFGSDAL 65

Query: 64  GGKFGSIYVVTDPSDDPENPKHGTLRFGAIQPQPLWIVFARSMVITPKRELMVNSYKTID 123
           GGKFGSIYVV DPSDDPE PK GTLRFG IQ +PLWIVFAR MVIT +RELMVNS+KTID
Sbjct: 66  GGKFGSIYVVIDPSDDPEYPKPGTLRFGVIQEEPLWIVFARDMVITLERELMVNSFKTID 125

Query: 124 GRGAKVEIAYGACLTIHNVSHVIVHGISIHDCKPGKPGLVRSSPDHCGERQWSDGDAISI 183
           GRGAKVEI  G C+TI NVSHVI+HGI+I DCKP KPG VRSS  HCG+RQ SDGDAIS+
Sbjct: 126 GRGAKVEIGNGPCITIQNVSHVIIHGITIRDCKPAKPGRVRSSVTHCGDRQQSDGDAISV 185

Query: 184 FSSTHVWIDHCYLARCTDGLIDVIHASNAVTISNNYLTQHDKVILLGHNDDFTADRNMRV 243
           FSS+H+WIDHC LA CTDGLIDVIHAS AVTISNNY +QHDKVILLGHND+FTADR MRV
Sbjct: 186 FSSSHIWIDHCSLASCTDGLIDVIHASTAVTISNNYFSQHDKVILLGHNDEFTADRIMRV 245

Query: 244 TVAFNRFGAGLVQRMPRVRHGYAHVANNWYNKWEMYAMGGSANPTIFSQGNYFIAPDEQC 303
           TVAFNRFG GLVQRMPRVR GYAHVANNWY+KWEMYA+GGSA+P IFSQGNYF APD+  
Sbjct: 246 TVAFNRFGDGLVQRMPRVRFGYAHVANNWYHKWEMYAVGGSADPKIFSQGNYFDAPDDSS 305

Query: 304 SKQVTKREVYESGWRKWKWRSSNDVFLNGAYFIPSGWGICAPLYTRAQAFRVAHGSMVPL 363
           SKQVTKREVY +GW+KWKWRSSNDVF+NGAYFIPSGWG C P+YTR QAF VAHGS+ PL
Sbjct: 306 SKQVTKREVYVNGWKKWKWRSSNDVFVNGAYFIPSGWGSCTPIYTRDQAFPVAHGSLAPL 365

Query: 364 LTIAAGPLTCTLGQPC 377
           LT +AG L+C +G+ C
Sbjct: 366 LTDSAGALSCVVGKAC 381

[Close]

BLAST of Sed0020562 vs. TAIR 10
Match: AT1G11920.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 554.3 bits (1427), Expect = 7.6e-158
Identity = 253/376 (67.29%), Postives = 305/376 (81.12%), Query Frame = 0


Query: 1   MAFLFLFFLATIINPSHSTPYPNKRLTRNPIDACWRANPNWAANRRALADCAAGFGKDAI 60
           ++ LF  F ++++  ++S  Y   +L  NPID+CWR NP WA+NRRALADCA GFGK A+
Sbjct: 9   ISLLFAAFSSSVVEAAYSNGYTIPKLLPNPIDSCWRRNPYWASNRRALADCAVGFGKSAV 68

Query: 61  GGKFGSIYVVTDPSDDPENPKHGTLRFGAIQPQPLWIVFARSMVITPKRELMVNSYKTID 120
           GGK+GSIYVVT+PSDDPENP+ GTLR+  IQ +PLWI FAR MVI  + EL++NSYKTID
Sbjct: 69  GGKYGSIYVVTNPSDDPENPRPGTLRYAVIQSKPLWITFARDMVIVLRNELIMNSYKTID 128

Query: 121 GRGAKVEIAYGACLTIHNVSHVIVHGISIHDCKPGKPGLVRSSPDHCGERQWSDGDAISI 180
           GRGAKVEIAYG C+TI +VSHVI+HGISIHDCKPGK G VRSSP H G R+ SDGDAI+I
Sbjct: 129 GRGAKVEIAYGPCITIQHVSHVIIHGISIHDCKPGKSGRVRSSPTHVGSRKGSDGDAIAI 188

Query: 181 FSSTHVWIDHCYLARCTDGLIDVIHASNAVTISNNYLTQHDKVILLGHNDDFTADRNMRV 240
           F S+H+WIDHC+ +RC DGLIDV+HAS AVTISNNY TQHDKV+LLGHND+   D+ MRV
Sbjct: 189 FDSSHIWIDHCFFSRCQDGLIDVLHASTAVTISNNYFTQHDKVMLLGHNDNNVEDKIMRV 248

Query: 241 TVAFNRFGAGLVQRMPRVRHGYAHVANNWYNKWEMYAMGGSANPTIFSQGNYFIAPDEQC 300
           T+AFN FG GL++RMPRVR GYAHVANN Y KW+MYA+GGSA+PTIFS+GNYF+A D+  
Sbjct: 249 TIAFNHFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSADPTIFSEGNYFVASDDPS 308

Query: 301 SKQVTKREVYESGWRKWKWRSSNDVFLNGAYFIPSGWGICAPLYTRAQAFRVAHGSMVPL 360
            KQVTKR      W++WKWR+S DVF NGAYF+PSG+G   PLY RA+ F V+HGS+VPL
Sbjct: 309 KKQVTKRIDSGYDWKRWKWRTSKDVFKNGAYFVPSGYGTVTPLYGRAERFPVSHGSLVPL 368

Query: 361 LTIAAGPLTCTLGQPC 377
           LT +AGPL C  G+ C
Sbjct: 369 LTSSAGPLHCYSGRIC 384

[Close]

BLAST of Sed0020562 vs. TAIR 10
Match: AT4G22080.1 (root hair specific 14 )

HSP 1 Score: 515.4 bits (1326), Expect = 3.9e-146
Identity = 238/348 (68.39%), Postives = 283/348 (81.32%), Query Frame = 0


Query: 29  NPIDACWRANPNWAANRRALADCAAGFGKDAIGGKFGSIYVVTDPSDDPENPKHGTLRFG 88
           NP+D+CWR   +WAANR+ LADC  GFG   +GGK G++YVVT+P D+ +NP+ G+LR+G
Sbjct: 47  NPVDSCWRLKSDWAANRKDLADCVVGFGSSTLGGKKGNLYVVTNPYDNAQNPQPGSLRYG 106

Query: 89  AIQPQPLWIVFARSMVITPKRELMVNSYKTIDGRGAKVEIAYGACLTIHNVSHVIVHGIS 148
            IQ +PLWI FA+ MVIT + ELMVNSYKTIDGRGAKVEIAYG C+TI +V++VIVHGIS
Sbjct: 107 VIQAKPLWITFAKDMVITLENELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIVHGIS 166

Query: 149 IHDCKPGKPGLVRSSPDHCGERQWSDGDAISIFSSTHVWIDHCYLARCTDGLIDVIHASN 208
           IHDCKPGK G+VRSSP H G R+ SDGDAI+IF S+++WIDHCYLA CTDGLIDVIHAS 
Sbjct: 167 IHDCKPGKYGMVRSSPTHVGHRKGSDGDAIAIFGSSNIWIDHCYLASCTDGLIDVIHAST 226

Query: 209 AVTISNNYLTQHDKVILLGHNDDFTADRNMRVTVAFNRFGAGLVQRMPRVRHGYAHVANN 268
            +TISNNY TQHDKV+LLGHNDDF  D  M+VTVAFN FG GLV+RMPRVR GYAHVANN
Sbjct: 227 GITISNNYFTQHDKVMLLGHNDDFVQDVKMKVTVAFNHFGPGLVERMPRVRRGYAHVANN 286

Query: 269 WYNKWEMYAMGGSANPTIFSQGNYFIAPDEQCSKQVTKREVYESGWRKWKWRSSNDVFLN 328
            Y+KW MYA+GGSA+PTIFS+GNYFIA D+  SK+VTKREV + GW  W+WR+S DVF N
Sbjct: 287 RYDKWIMYAIGGSADPTIFSEGNYFIASDKSNSKEVTKREV-KGGWNNWRWRTSKDVFKN 346

Query: 329 GAYFIPSGWGICAPLYTRAQAFRVAHGSMVPLLTIAAGPLTCTLGQPC 377
           GAYF+PSG+G  +  Y+ AQ F VA G++VP LT  AGPL C    PC
Sbjct: 347 GAYFVPSGYGSISLPYSSAQRFTVAPGNLVPSLTADAGPLNCNRNGPC 393

[Close]

BLAST of Sed0020562 vs. TAIR 10
Match: AT4G22090.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 513.1 bits (1320), Expect = 1.9e-145
Identity = 242/361 (67.04%), Postives = 284/361 (78.67%), Query Frame = 0


Query: 18  STPYP--NKRLTRNPIDACWRANPNWAANRRALADCAAGFGKDAIGGKFGSIYVVTDPSD 77
           + PYP    +   NP+D+CWR   +W  NR  LADCA GFG   +GGK G+IYVVT+P D
Sbjct: 34  AAPYPAEEPQNIMNPVDSCWRLKSDWDVNREDLADCAVGFGSSTLGGKKGNIYVVTNPYD 93

Query: 78  DPENPKHGTLRFGAIQPQPLWIVFARSMVITPKRELMVNSYKTIDGRGAKVEIAYGACLT 137
           + +NP  G+LR+G IQ +PLWI FA+ MVIT   ELMVNSYKTIDGRGAKVEIAYG C+T
Sbjct: 94  NAQNPHPGSLRYGVIQAKPLWITFAKDMVITLANELMVNSYKTIDGRGAKVEIAYGPCIT 153

Query: 138 IHNVSHVIVHGISIHDCKPGKPGLVRSSPDHCGERQWSDGDAISIFSSTHVWIDHCYLAR 197
           I +V++VIVHGISIHDCKPGK G VRSSP H G R+ SDGDAI+IF S++VWIDHCYLA 
Sbjct: 154 IQDVTNVIVHGISIHDCKPGKSGKVRSSPTHVGHRKGSDGDAITIFGSSNVWIDHCYLAS 213

Query: 198 CTDGLIDVIHASNAVTISNNYLTQHDKVILLGHNDDFTADRNMRVTVAFNRFGAGLVQRM 257
           CTDGLIDVIHAS A+TISNNY TQHDKV+LLGHND+F  D  M+VTVAFN FG GLV+RM
Sbjct: 214 CTDGLIDVIHASTAITISNNYFTQHDKVMLLGHNDNFVKDVKMKVTVAFNHFGPGLVERM 273

Query: 258 PRVRHGYAHVANNWYNKWEMYAMGGSANPTIFSQGNYFIAPDEQCSKQVTKREVYESGWR 317
           PRVR GYAHVANN Y+KW MYA+GGSA+PTIFS+GNYFIA D+  SK+VTKREV + GW 
Sbjct: 274 PRVRRGYAHVANNRYDKWIMYAIGGSADPTIFSEGNYFIASDKSYSKEVTKREV-KGGWN 333

Query: 318 KWKWRSSNDVFLNGAYFIPSGWGICAPLYTRAQAFRVAHGSMVPLLTIAAGPLTCTLGQP 377
            W+WR+SNDVF NGA+F+PSG+G     Y+ AQ F VA G++VP LT  AGPL C    P
Sbjct: 334 NWRWRTSNDVFKNGAFFVPSGYGSIPLPYSSAQRFTVAPGNLVPSLTADAGPLNCNRNGP 393

[Close]

BLAST of Sed0020562 vs. TAIR 10
Match: AT1G30350.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 478.4 bits (1230), Expect = 5.3e-135
Identity = 229/376 (60.90%), Postives = 277/376 (73.67%), Query Frame = 0


Query: 1   MAFLFLFFLATIINPSHSTPYPNKRLTRNPIDACWRANPNWAANRRALADCAAGFGKDAI 60
           ++ L   F + ++  +HS      R++ NPIDACWR NP WA NR+ALA CA G+GK AI
Sbjct: 8   VSLLLAAFASPLLETAHSYNVTAPRVSLNPIDACWRRNPKWATNRQALAHCAVGYGKAAI 67

Query: 61  GGKFGSIYVVTDPSDDPENPKHGTLRFGAIQPQPLWIVFARSMVITPKRELMVNSYKTID 120
           GGK G IYVVT+PSD+P  P  GTLR+   QP+PLWI FAR MVI  K +LM+NSYKTID
Sbjct: 68  GGKNGPIYVVTNPSDNPTRPSPGTLRYAVSQPKPLWITFARDMVIVLKSQLMINSYKTID 127

Query: 121 GRGAKVEIAYGACLTIHNVSHVIVHGISIHDCKPGKPGLVRSSPDHCGERQWSDGDAISI 180
           GRGAKVEIA G CL I  V HVI+HGISIHDCK    G+              DGD I +
Sbjct: 128 GRGAKVEIANGPCLRIRQVKHVIIHGISIHDCKADPNGM--------------DGDGIRV 187

Query: 181 FSSTHVWIDHCYLARCTDGLIDVIHASNAVTISNNYLTQHDKVILLGHNDDFTADRNMRV 240
           F STHVWIDHC+L+RC DGLIDVI +S AVTISNNY TQHDKV+LLGH+D +  D++MRV
Sbjct: 188 FQSTHVWIDHCFLSRCHDGLIDVIVSSTAVTISNNYFTQHDKVMLLGHDDSYMGDKDMRV 247

Query: 241 TVAFNRFGAGLVQRMPRVRHGYAHVANNWYNKWEMYAMGGSANPTIFSQGNYFIAPDEQC 300
           T+AFN FG GL++RMPRVR GYAHVANN Y KW+MYA+GGSANP IFS+GNYF+AP+++ 
Sbjct: 248 TIAFNTFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSANPIIFSEGNYFVAPEKRS 307

Query: 301 SKQVTKREVYESGWRKWKWRSSNDVFLNGAYFIPSGWGICAPLYTRAQAFRVAHGSMVPL 360
           SKQVTKR +     ++WKW +S DVF+NGA+F P G  I  PLY   + FRVAHGS+VP 
Sbjct: 308 SKQVTKRMMAGPDSKRWKWGTSRDVFMNGAFFGPPG-VIVRPLYKGGEGFRVAHGSLVPS 367

Query: 361 LTIAAGPLTCTLGQPC 377
           LT +AGPL C +G+ C
Sbjct: 368 LTSSAGPLRCYVGRIC 368

[Close]

BLAST of Sed0020562 vs. TAIR 10
Match: AT3G27400.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 446.4 bits (1147), Expect = 2.2e-125
Identity = 207/352 (58.81%), Postives = 255/352 (72.44%), Query Frame = 0


Query: 27  TRNPIDACWRANPNWAANRRALADCAAGFGKDAIGGKFGSIYVVTDP-SDDPENPKHGTL 86
           T NPID CWR +PNW  NR+ LADCA GFGK+AIGG+ G IYVVTDP +DDP NP+ GTL
Sbjct: 62  TGNPIDDCWRCDPNWETNRQRLADCAIGFGKNAIGGRKGRIYVVTDPANDDPVNPRPGTL 121

Query: 87  RFGAIQPQPLWIVFARSMVITPKRELMVNSYKTIDGRGAKVEIAYGACLTIHNVSHVIVH 146
           R+   Q +PLWI+F R MVI  K+EL++ S+KTIDGRG+ V I  G CL IH  +++I+H
Sbjct: 122 RYAVTQEEPLWIIFKRDMVIRLKKELIITSFKTIDGRGSSVHITDGPCLKIHYATNIIIH 181

Query: 147 GISIHDCKPGKPGLVRSSPDHCGERQWSDGDAISIFSSTHVWIDHCYLARCTDGLIDVIH 206
           GI+IHDCKPG  G+++  P H G    SDGDA++IF   HVWIDHC L+ C DGLID IH
Sbjct: 182 GINIHDCKPGSGGMIKDGPHHTGWWMQSDGDAVAIFGGKHVWIDHCSLSNCDDGLIDAIH 241

Query: 207 ASNAVTISNNYLTQHDKVILLGHNDDFTADRNMRVTVAFNRFGAGLVQRMPRVRHGYAHV 266
            S A+TISNN++T HDKV+LLGH+D +T D+NM+VT+AFN FG GLVQRMPR RHGY HV
Sbjct: 242 GSTAITISNNHMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV 301

Query: 267 ANNWYNKWEMYAMGGSANPTIFSQGNYFIAPDEQCSKQVTKRE-VYESGWRKWKWRSSND 326
            NN Y  WEMYA+GGSA+PTI+SQGN F+AP+ + +K+VTK E   ES WR W WRS  D
Sbjct: 302 VNNDYTHWEMYAIGGSASPTIYSQGNRFLAPNTRFNKEVTKHEDAPESKWRDWNWRSEGD 361

Query: 327 VFLNGAYFIPSGWGICAPLYTRAQAFRVAHGSMVPLLTIAAGPLTCTLGQPC 377
           + LNGAYF  SG       Y RA +      S+V  +T  AG L+C  G+ C
Sbjct: 362 MLLNGAYFRESG-AEAPSTYARASSLSARPSSLVGSITTTAGTLSCRRGRRC 412

The following BLAST results are available for this feature:

BLAST of Sed0020562 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008440030.1	3.5e-181	80.97	PREDICTED: putative pectate lyase 2 [Cucumis melo] >TYK13026.1 putative pectate ...	[more]
XP_004134978.2	1.7e-180	81.33	putative pectate lyase 2 [Cucumis sativus] >KGN49481.2 hypothetical protein Csa_...	[more]
XP_038882226.1	5.2e-177	80.59	putative pectate lyase 2 [Benincasa hispida]	[more]
XP_022133314.1	5.2e-177	79.25	putative pectate lyase 2 [Momordica charantia]	[more]
KAG7033961.1	4.9e-175	78.99	putative pectate lyase 2, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Sed0020562 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65388	1.1e-156	67.29	Putative pectate lyase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g11920 PE=3 SV=2	[more]
O65456	5.5e-145	68.39	Probable pectate lyase 16 OS=Arabidopsis thaliana OX=3702 GN=At4g22080 PE=2 SV=1	[more]
O65457	2.7e-144	67.04	Putative pectate lyase 17 OS=Arabidopsis thaliana OX=3702 GN=At4g22090 PE=3 SV=1	[more]
Q9C8G4	7.4e-134	60.90	Probable pectate lyase 4 OS=Arabidopsis thaliana OX=3702 GN=At1g30350 PE=2 SV=1	[more]
Q9LTZ0	3.1e-124	58.81	Putative pectate lyase 11 OS=Arabidopsis thaliana OX=3702 GN=At3g27400 PE=3 SV=2	[more]

BLAST of Sed0020562 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CRJ6	1.7e-181	80.97	Pectate lyase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006270...	[more]
A0A1S3AZR0	1.7e-181	80.97	Pectate lyase OS=Cucumis melo OX=3656 GN=LOC103484628 PE=3 SV=1	[more]
A0A6J1BVN3	2.5e-177	79.25	Pectate lyase OS=Momordica charantia OX=3673 GN=LOC111005923 PE=3 SV=1	[more]
A0A6J1INN6	9.0e-175	78.72	Pectate lyase OS=Cucurbita maxima OX=3661 GN=LOC111478069 PE=3 SV=1	[more]
A0A6J1GF79	1.5e-174	78.46	Pectate lyase OS=Cucurbita moschata OX=3662 GN=LOC111453637 PE=3 SV=1	[more]

BLAST of Sed0020562 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G11920.1	7.6e-158	67.29	Pectin lyase-like superfamily protein	[more]
AT4G22080.1	3.9e-146	68.39	root hair specific 14	[more]
AT4G22090.1	1.9e-145	67.04	Pectin lyase-like superfamily protein	[more]
AT1G30350.1	5.3e-135	60.90	Pectin lyase-like superfamily protein	[more]
AT3G27400.1	2.2e-125	58.81	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018082	AmbAllergen	PRINTS	PR00807	AMBALLERGEN	coord: 110..126 score: 76.19 coord: 51..68 score: 61.11 coord: 174..195 score: 58.44 coord: 347..370 score: 40.87 coord: 254..273 score: 64.52 coord: 74..99 score: 60.81 coord: 317..341 score: 50.86 coord: 276..295 score: 74.05
IPR002022	Pectate lyase	SMART	SM00656	amb_all	coord: 102..299 e-value: 4.5E-94 score: 328.5
IPR002022	Pectate lyase	PFAM	PF00544	Pectate_lyase_4	coord: 109..293 e-value: 1.0E-24 score: 87.3
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 28..369 e-value: 1.4E-112 score: 378.1
IPR045032	Pectin lyase family	PANTHER	PTHR31683	PECTATE LYASE 18-RELATED	coord: 18..375
None	No IPR available	PANTHER	PTHR31683:SF157	PECTATE LYASE	coord: 18..375
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 29..366

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0020562.1	Sed0020562.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045490	pectin catabolic process
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0030570	pectate lyase activity