Sed0020540 (gene) Chayote v1

Overview


Name	Sed0020540
Type	gene
Organism	Sechium edule (Chayote v1)
Description	ethylene-responsive transcription factor 1B
Location	LG02: 50242121 .. 50243039 (+)
RNA-Seq Expression	Sed0020540
Synteny	Sed0020540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTAAAACAGAGCAGCTCAAAAACAGAGGAGGAGCTGTGTCTTCATCTTCTTCAATTTTTGAACATTTCAATTCTCAATTGAATTTCAATATTTGTTAATCAGATGGATTACTCTGTATTCTTCTCCCAGTATTCGGATATCTCTACCGAATCGTCGTTCGGTTCGCCGGAATCGTCGTTCATGAATTCAGACCAAAATTTCCTTCCTTTCAATGAGAATGATTCGGAAGAAATGCTTTTGTATGGGCTGATCTCAGAGGGGACTCTCGGGGGTAGCGGGCCGGTGCGAGTCAAGGAAGAGGAGGTCGATTCGGTCCGCGAAGCCAGCCCGAAAAGGGAGAAGGCTTACAGAGGAGTTCGCCGGCGGCCGTGGGGGAAGTTCGCGGCGGAGATTAGAGACTCCACCAGACATGGCATTAGGGTCTGGTTGGGGACTTTCGACAGCGCCGAAGCTGCTGCTTTAGCATACGATCAAGCCGCTTTTTCGATGCGCGGAGCCGCCGCGATCCTCAATTTTCCCGTTGAGAGAGTTAGGGAGTCCCTCAAGGAGATGAACTCCGGCGGCGATGGTTTCGCCGACGACGGCGGGTCTCCGGTGATTGCGTTGAAAAGGAAACACTCCATCAAAAGGAAAGCCATTAGTAAAAAGAGCAAAGAAAGAGATGCGAGGATTCAAAATATGGTGGTTTTTGAGGATTTAGGACCAGAGTATTTGGAAGAGCTTTTGGGATCTTCTCAAAGTGGTAGTTCTTGTTCTTTCTAAATCAAAATTATTATTCTTAATTTTTCATTTTTTTTTTTTTTTATGGGTGTTTTTTCTTTTTGGGTTTTCTCAATTTCTTGTTAATACTTTTTTTTTCCCTTCTCCTTCTTCTAATGTTTCTCAAGACAATAAGAAAGAAGAACAAGCTTCTAATGT

mRNA sequence

GCTAAAACAGAGCAGCTCAAAAACAGAGGAGGAGCTGTGTCTTCATCTTCTTCAATTTTTGAACATTTCAATTCTCAATTGAATTTCAATATTTGTTAATCAGATGGATTACTCTGTATTCTTCTCCCAGTATTCGGATATCTCTACCGAATCGTCGTTCGGTTCGCCGGAATCGTCGTTCATGAATTCAGACCAAAATTTCCTTCCTTTCAATGAGAATGATTCGGAAGAAATGCTTTTGTATGGGCTGATCTCAGAGGGGACTCTCGGGGGTAGCGGGCCGGTGCGAGTCAAGGAAGAGGAGGTCGATTCGGTCCGCGAAGCCAGCCCGAAAAGGGAGAAGGCTTACAGAGGAGTTCGCCGGCGGCCGTGGGGGAAGTTCGCGGCGGAGATTAGAGACTCCACCAGACATGGCATTAGGGTCTGGTTGGGGACTTTCGACAGCGCCGAAGCTGCTGCTTTAGCATACGATCAAGCCGCTTTTTCGATGCGCGGAGCCGCCGCGATCCTCAATTTTCCCGTTGAGAGAGTTAGGGAGTCCCTCAAGGAGATGAACTCCGGCGGCGATGGTTTCGCCGACGACGGCGGGTCTCCGGTGATTGCGTTGAAAAGGAAACACTCCATCAAAAGGAAAGCCATTAGTAAAAAGAGCAAAGAAAGAGATGCGAGGATTCAAAATATGGTGGTTTTTGAGGATTTAGGACCAGAGTATTTGGAAGAGCTTTTGGGATCTTCTCAAAGTGGTAGTTCTTGTTCTTTCTAAATCAAAATTATTATTCTTAATTTTTCATTTTTTTTTTTTTTTATGGGTGTTTTTTCTTTTTGGGTTTTCTCAATTTCTTGTTAATACTTTTTTTTTCCCTTCTCCTTCTTCTAATGTTTCTCAAGACAATAAGAAAGAAGAACAAGCTTCTAATGT

Coding sequence (CDS)

ATGGATTACTCTGTATTCTTCTCCCAGTATTCGGATATCTCTACCGAATCGTCGTTCGGTTCGCCGGAATCGTCGTTCATGAATTCAGACCAAAATTTCCTTCCTTTCAATGAGAATGATTCGGAAGAAATGCTTTTGTATGGGCTGATCTCAGAGGGGACTCTCGGGGGTAGCGGGCCGGTGCGAGTCAAGGAAGAGGAGGTCGATTCGGTCCGCGAAGCCAGCCCGAAAAGGGAGAAGGCTTACAGAGGAGTTCGCCGGCGGCCGTGGGGGAAGTTCGCGGCGGAGATTAGAGACTCCACCAGACATGGCATTAGGGTCTGGTTGGGGACTTTCGACAGCGCCGAAGCTGCTGCTTTAGCATACGATCAAGCCGCTTTTTCGATGCGCGGAGCCGCCGCGATCCTCAATTTTCCCGTTGAGAGAGTTAGGGAGTCCCTCAAGGAGATGAACTCCGGCGGCGATGGTTTCGCCGACGACGGCGGGTCTCCGGTGATTGCGTTGAAAAGGAAACACTCCATCAAAAGGAAAGCCATTAGTAAAAAGAGCAAAGAAAGAGATGCGAGGATTCAAAATATGGTGGTTTTTGAGGATTTAGGACCAGAGTATTTGGAAGAGCTTTTGGGATCTTCTCAAAGTGGTAGTTCTTGTTCTTTCTAA

Protein sequence

MDYSVFFSQYSDISTESSFGSPESSFMNSDQNFLPFNENDSEEMLLYGLISEGTLGGSGPVRVKEEEVDSVREASPKREKAYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAAALAYDQAAFSMRGAAAILNFPVERVRESLKEMNSGGDGFADDGGSPVIALKRKHSIKRKAISKKSKERDARIQNMVVFEDLGPEYLEELLGSSQSGSSCSF

Homology

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BLAST of Sed0020540 vs. NCBI nr
Match: XP_016898922.1 (PREDICTED: ethylene-responsive transcription factor 1B [Cucumis melo] >KAA0049257.1 ethylene-responsive transcription factor 1B [Cucumis melo var. makuwa] >TYK17300.1 ethylene-responsive transcription factor 1B [Cucumis melo var. makuwa])

HSP 1 Score: 349.4 bits (895), Expect = 2.3e-92
Identity = 188/228 (82.46%), Postives = 200/228 (87.72%), Query Frame = 0


Query: 1   MDYSVFFSQYSDISTESSFGSPESSFMNSDQNFLPFNENDSEEMLLYGLISEGTLGGS-- 60
           MDYSVFFS  SD S+ESSFGSPESSF N D NFLPFNENDSEEMLLYGLISEGT   S  
Sbjct: 1   MDYSVFFSPVSDFSSESSFGSPESSFTNLDHNFLPFNENDSEEMLLYGLISEGTYESSDT 60

Query: 61  --GPVRVKEEEVDSVREASPKREKAYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAE 120
             G V+VKEEEVDS+ E SPK+E+AYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAE
Sbjct: 61  SIGTVQVKEEEVDSIGEESPKKERAYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAE 120

Query: 121 AAALAYDQAAFSMRGAAAILNFPVERVRESLKEMNSG----GDGFADDGGSPVIALKRKH 180
           AAALAYDQAAFSMRGAAAILNFPV+RVRESLKEMN G    G+  A+DGGSPV+ALKRKH
Sbjct: 121 AAALAYDQAAFSMRGAAAILNFPVDRVRESLKEMNGGSGGSGNSLAEDGGSPVVALKRKH 180

Query: 181 SIKRKAISKKSKERDARIQNMVVFEDLGPEYLEELLGSSQSGS-SCSF 220
           SI+RKAISKKSKERD RIQN+VV EDLG EYLEELLGSSQS + SCSF
Sbjct: 181 SIRRKAISKKSKERDVRIQNVVVLEDLGAEYLEELLGSSQSDNPSCSF 228

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BLAST of Sed0020540 vs. NCBI nr
Match: XP_022150897.1 (ethylene-responsive transcription factor 1B [Momordica charantia])

HSP 1 Score: 348.2 bits (892), Expect = 5.1e-92
Identity = 187/221 (84.62%), Postives = 196/221 (88.69%), Query Frame = 0


Query: 1   MDYSVFFSQYSDISTESSFGSPESSFMNSDQNFLPFNENDSEEMLLYGLISEGTLGGSGP 60
           MD S FFS  SD S+ESSFGSPESSFMN D  FLPFNENDSEEMLLY LISEGT GG   
Sbjct: 1   MDSSGFFSPASDFSSESSFGSPESSFMNLDHYFLPFNENDSEEMLLYELISEGTQGG--- 60

Query: 61  VRVKEEEVDSVREASPKREKAYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAAAL 120
           VRVKEEEVDSV E SPK+E++YRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAAAL
Sbjct: 61  VRVKEEEVDSVGEESPKKERSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAAAL 120

Query: 121 AYDQAAFSMRGAAAILNFPVERVRESLKEMN--SGGDGFADDGGSPVIALKRKHSIKRKA 180
           AYDQAAFSMRGAAAILNFPV+RVRESLKEMN   GG G  DDGGSPV+ALKRKHSI+RKA
Sbjct: 121 AYDQAAFSMRGAAAILNFPVDRVRESLKEMNCSGGGGGGGDDGGSPVVALKRKHSIRRKA 180

Query: 181 ISKKSKERDARIQNMVVFEDLGPEYLEELLGSSQSGSSCSF 220
           ISKKSKERD RIQN+VV EDLG EYLEELLGSSQSGS CS+
Sbjct: 181 ISKKSKERDVRIQNVVVLEDLGAEYLEELLGSSQSGSPCSY 218

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BLAST of Sed0020540 vs. NCBI nr
Match: XP_038879960.1 (ethylene-response factor C3-like [Benincasa hispida])

HSP 1 Score: 346.7 bits (888), Expect = 1.5e-91
Identity = 185/227 (81.50%), Postives = 197/227 (86.78%), Query Frame = 0


Query: 1   MDYSVFFSQYSDISTESSFGSPESSFMNSDQNFLPFNENDSEEMLLYGLISEGTLGGSG- 60
           MDYS  FS  SD S+ESSFGSPESSFMN D +FLPFNENDSEEMLLYGLIS GT   S  
Sbjct: 1   MDYSGLFSSISDFSSESSFGSPESSFMNLDHDFLPFNENDSEEMLLYGLISGGTQDSSDT 60

Query: 61  ---PVRVKEEEVDSVREASPKREKAYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAE 120
               VRVKEEEVDS+ E SPK+E+AYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAE
Sbjct: 61  GIRTVRVKEEEVDSIGEESPKKERAYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAE 120

Query: 121 AAALAYDQAAFSMRGAAAILNFPVERVRESLKEMN----SGGDGFADDGGSPVIALKRKH 180
           AAALAYDQAAFSMRGAAAILNFPV+RVRESLKEMN    + GD  A+DGGSPV+ALKRKH
Sbjct: 121 AAALAYDQAAFSMRGAAAILNFPVDRVRESLKEMNCSGGAAGDNMAEDGGSPVVALKRKH 180

Query: 181 SIKRKAISKKSKERDARIQNMVVFEDLGPEYLEELLGSSQSGSSCSF 220
           SI+RKAISKKSKERD RIQN++V EDLG EYLEELLGSSQSGS CSF
Sbjct: 181 SIRRKAISKKSKERDVRIQNVMVLEDLGTEYLEELLGSSQSGSPCSF 227

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BLAST of Sed0020540 vs. NCBI nr
Match: XP_004134068.1 (ethylene-response factor C3 [Cucumis sativus] >KGN56864.1 hypothetical protein Csa_011784 [Cucumis sativus])

HSP 1 Score: 340.9 bits (873), Expect = 8.2e-90
Identity = 184/228 (80.70%), Postives = 195/228 (85.53%), Query Frame = 0


Query: 1   MDYSVFFSQYSDISTESSFGSPESSFMNSDQNFLPFNENDSEEMLLYGLISEGTL----G 60
           MDYS F S  SD S+ESSFGSPESSF N D NFLPFNENDSEEMLLYGLISEGT      
Sbjct: 1   MDYSAFISPLSDFSSESSFGSPESSFTNLDHNFLPFNENDSEEMLLYGLISEGTYESFDT 60

Query: 61  GSGPVRVKEEEVDSVREASPKREKAYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAE 120
             G V+VKEEEVDS+ E SPK+E+AYRGVRRRPWGKFAAEIRDSTRHG RVWLGTFDSAE
Sbjct: 61  SIGTVQVKEEEVDSIGEESPKKERAYRGVRRRPWGKFAAEIRDSTRHGTRVWLGTFDSAE 120

Query: 121 AAALAYDQAAFSMRGAAAILNFPVERVRESLKEMNSG----GDGFADDGGSPVIALKRKH 180
           AAALAYDQAAFSMRGAAAILNFPV+RVRESLKEMN+G    GD  A+DGGSPV+ALKRKH
Sbjct: 121 AAALAYDQAAFSMRGAAAILNFPVDRVRESLKEMNAGSGGSGDSLAEDGGSPVVALKRKH 180

Query: 181 SIKRKAISKKSKERDARIQNMVVFEDLGPEYLEELLGSSQSGS-SCSF 220
           SI+RKAI KKSKERD RIQ +VV EDLG EYLEELLGSSQS S SCSF
Sbjct: 181 SIRRKAIGKKSKERDVRIQTVVVLEDLGTEYLEELLGSSQSDSPSCSF 228

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BLAST of Sed0020540 vs. NCBI nr
Match: KAG7028832.1 (Ethylene-responsive transcription factor 1B, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 340.5 bits (872), Expect = 1.1e-89
Identity = 182/224 (81.25%), Postives = 195/224 (87.05%), Query Frame = 0


Query: 1   MDYSVFFSQYSDISTESSFGSPESSFMNSDQNFLPFNENDSEEMLLYGLISEG----TLG 60
           MDYS FFS  SD S+ESSF SPESSF+N D +FLPFNENDSEEMLLY LISEG    +  
Sbjct: 122 MDYSGFFSPASDFSSESSFDSPESSFINLDHDFLPFNENDSEEMLLYELISEGRNDSSEK 181

Query: 61  GSGPVRVKEEEVDSVREASPKREKAYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAE 120
           G+G VRVKEEEVDSV E SPK+E++YRGVRRRPWGKFAAEIRDSTR GIRVWLGTFDSAE
Sbjct: 182 GNGAVRVKEEEVDSVGEESPKKERSYRGVRRRPWGKFAAEIRDSTRRGIRVWLGTFDSAE 241

Query: 121 AAALAYDQAAFSMRGAAAILNFPVERVRESLKEMNSGGDGF--ADDGGSPVIALKRKHSI 180
           AAALAYDQAAFSMRGA AILNFPV+RVRESLKEMN GGDG+  A+DGGSPVIALKRKHS+
Sbjct: 242 AAALAYDQAAFSMRGATAILNFPVDRVRESLKEMNCGGDGYGLAEDGGSPVIALKRKHSV 301

Query: 181 KRKAISKKSKERDARIQNMVVFEDLGPEYLEELLGSSQSGSSCS 219
           +R  ISKK KERD RIQNMVV EDLG EYLEELLGSSQSGS CS
Sbjct: 302 RRNGISKKKKERDVRIQNMVVLEDLGTEYLEELLGSSQSGSPCS 345

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BLAST of Sed0020540 vs. ExPASy Swiss-Prot
Match: Q8LDC8 (Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana OX=3702 GN=ERF1B PE=1 SV=2)

HSP 1 Score: 220.3 bits (560), Expect = 2.1e-56
Identity = 129/223 (57.85%), Postives = 159/223 (71.30%), Query Frame = 0


Query: 1   MDYSVFFSQYSDISTESSFGSPESSFMNSDQN--FLPFNENDSEEMLLYGLISEGTLGGS 60
           MD  +  S +S  S E S GS   SF +S  N   LPFNENDSEEM LYGLI + T    
Sbjct: 1   MDPFLIQSPFSGFSPEYSIGSSPDSFSSSSSNNYSLPFNENDSEEMFLYGLIEQSTQQTY 60

Query: 61  GPVRVKEEEVDSVREASPKREKAYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAA 120
                ++  + SV  +S K EK+YRGVRRRPWGKFAAEIRDSTR+GIRVWLGTF+SAE A
Sbjct: 61  IDSDSQDLPIKSV--SSRKSEKSYRGVRRRPWGKFAAEIRDSTRNGIRVWLGTFESAEEA 120

Query: 121 ALAYDQAAFSMRGAAAILNFPVERVRESLKEMNSGGDGFADDGGSPVIALKRKHSIKRKA 180
           ALAYDQAAFSMRG++AILNF  ERV+ESL E+        +DG SPV+ALKRKHS++R+ 
Sbjct: 121 ALAYDQAAFSMRGSSAILNFSAERVQESLSEIKY----TYEDGCSPVVALKRKHSMRRRM 180

Query: 181 ISKKSKE-----RDARIQNMVVFEDLGPEYLEELLGSSQSGSS 217
            +KK+K+     R  ++ N+VVFEDLG +YLEELLGSS++  +
Sbjct: 181 TNKKTKDSDFDHRSVKLDNVVVFEDLGEQYLEELLGSSENSGT 217

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BLAST of Sed0020540 vs. ExPASy Swiss-Prot
Match: A0A3Q7I5Y9 (Ethylene-response factor C3 OS=Solanum lycopersicum OX=4081 GN=ERF.C.3 PE=2 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 9.2e-52
Identity = 112/186 (60.22%), Postives = 144/186 (77.42%), Query Frame = 0


Query: 32  NFLPFNENDSEEMLLYGLISEG----TLGGSGPVRVKEEEVDSVREASPKREKAYRGVRR 91
           N LPFN ND+++MLLY L++EG    T+  S    +KEEEV S  E   +++K YRGVR+
Sbjct: 14  NSLPFNVNDTQDMLLYNLVAEGSSQETVNSSSSYGIKEEEVTSYEE--ERKDKNYRGVRK 73

Query: 92  RPWGKFAAEIRDSTRHGIRVWLGTFDSAEAAALAYDQAAFSMRGAAAILNFPVERVRESL 151
           RPWGK+AAEIRDSTR+G+RVWLGTFD+AE AALAYDQAAF+MRG+ AILNFPVE V+ESL
Sbjct: 74  RPWGKYAAEIRDSTRNGVRVWLGTFDNAEEAALAYDQAAFAMRGSMAILNFPVEIVKESL 133

Query: 152 KEMNSGGDGFADDGGSPVIALKRKHSIKRKAISKKSKERDARIQNMVVFEDLGPEYLEEL 211
            EM    DG      SPVI LK+++S++RK++S+K++ R    +++VVFEDLG EYLEEL
Sbjct: 134 NEMKCRFDG----NCSPVIELKKRYSMRRKSVSRKNRAR----KDVVVFEDLGAEYLEEL 189

Query: 212 LGSSQS 214
           L SS+S
Sbjct: 194 LISSES 189

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BLAST of Sed0020540 vs. ExPASy Swiss-Prot
Match: Q8VYM0 (Ethylene-responsive transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=ERF15 PE=2 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 7.6e-38
Identity = 112/253 (44.27%), Postives = 142/253 (56.13%), Query Frame = 0


Query: 7   FSQYSDISTESSFGSPESSFMNSDQNFL------------------PFNENDSEEMLLYG 66
           +SQ S  S+ SS+ S + S + ++  FL                   F   +S EM++  
Sbjct: 3   YSQSSMYSSPSSWSSSQESLLWNESCFLDQSSEPQAFFCPNYDYSDDFFSFESPEMMIKE 62

Query: 67  LISEGTLGGSGPVRVKEEEVDSVREASPKREKAYRGVRRRPWGKFAAEIRDSTRHGIRVW 126
            I  G +  S     +EEE   + E     E++YRGVR+RPWGKFAAEIRDSTR+GIRVW
Sbjct: 63  EIQNGDVSNS-----EEEEKVGIDE-----ERSYRGVRKRPWGKFAAEIRDSTRNGIRVW 122

Query: 127 LGTFDSAEAAALAYDQAAFSMRGAAAILNFPVERVRESLKEMNSGGDGFADDGGSPVIAL 186
           LGTFD AE AALAYDQAAF+ +G+ A LNFPVE VRESLK+M +       DGGSPV+AL
Sbjct: 123 LGTFDKAEEAALAYDQAAFATKGSLATLNFPVEVVRESLKKMENVN---LHDGGSPVMAL 182

Query: 187 KRKHSIKRKAISKK----------------------SKERDARIQN--------MVVFED 212
           KRKHS++ +   KK                      S  R +  Q+        +VVFED
Sbjct: 183 KRKHSLRNRPRGKKRSSSSSSSSSNSSSCSSSSSTSSTSRSSSKQSVVKQESGTLVVFED 242

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BLAST of Sed0020540 vs. ExPASy Swiss-Prot
Match: Q9LND1 (Ethylene-responsive transcription factor ERF094 OS=Arabidopsis thaliana OX=3702 GN=ERF094 PE=2 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 6.0e-35
Identity = 102/255 (40.00%), Postives = 139/255 (54.51%), Query Frame = 0


Query: 1   MDYSVFF--SQYSDISTESSFGSPESSFM--------NSDQNFLPFNENDSEEMLLYGLI 60
           M+Y   F   ++S  ++ SS  S + SF+        + DQ+FL  +  D+     +   
Sbjct: 1   MEYQTNFLSGEFSPENSSSSSWSSQESFLWEESFLHQSFDQSFLLSSPTDNYCDDFFAFE 60

Query: 61  SEGTLGGSGPVRVKEEEVDSVREASPKREKAYRGVRRRPWGKFAAEIRDSTRHGIRVWLG 120
           S           + +EE      A+ + EK+YRGVR+RPWGKFAAEIRDSTR GIRVWLG
Sbjct: 61  SS----------IIKEEGKEATVAAEEEEKSYRGVRKRPWGKFAAEIRDSTRKGIRVWLG 120

Query: 121 TFDSAEAAALAYDQAAFSMRGAAAILNFPVERVRESLKEMNSGGDGFADDGGSPVIALKR 180
           TFD+AEAAALAYDQAAF+++G+ A+LNFP + V ESL++M +      +DG SPVIALKR
Sbjct: 121 TFDTAEAAALAYDQAAFALKGSLAVLNFPADVVEESLRKMENVN---LNDGESPVIALKR 180

Query: 181 KHSIKRKAISKKSKERDARIQN-----------------------------------MVV 211
           KHS++ +   KK     + + +                                   +VV
Sbjct: 181 KHSMRNRPRGKKKSSSSSTLTSSPSSSSSYSSSSSSSSLSSRSRKQSVVMTQESNTTLVV 240

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BLAST of Sed0020540 vs. ExPASy Swiss-Prot
Match: O04681 (Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicum OX=4081 GN=PTI5 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 6.0e-27
Identity = 66/119 (55.46%), Postives = 83/119 (69.75%), Query Frame = 0


Query: 31  QNFLPFNENDSEEMLLYGLISEGTLGGSGPVRVKEEEVDSVREASPKR--EKAYRGVRRR 90
           Q+ LP NENDS+EM+LY +++E        +  + + +       P +   K YRGVRRR
Sbjct: 6   QSDLPLNENDSQEMVLYEVLNEANALNIPYLPQRNQLLPRNNILRPLQCIGKKYRGVRRR 65

Query: 91  PWGKFAAEIRDSTRHGIRVWLGTFDSAEAAALAYDQAAFSMRGAAAILNFPVERVRESL 148
           PWGK+AAEIRDS RHG RVWLGTF++AE AALAYD+AAF MRGA A+LNFP E V  S+
Sbjct: 66  PWGKYAAEIRDSARHGARVWLGTFETAEEAALAYDRAAFRMRGAKALLNFPSEIVNASV 124

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BLAST of Sed0020540 vs. ExPASy TrEMBL
Match: A0A5A7U4J3 (Ethylene-responsive transcription factor 1B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001540 PE=4 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 1.1e-92
Identity = 188/228 (82.46%), Postives = 200/228 (87.72%), Query Frame = 0


Query: 1   MDYSVFFSQYSDISTESSFGSPESSFMNSDQNFLPFNENDSEEMLLYGLISEGTLGGS-- 60
           MDYSVFFS  SD S+ESSFGSPESSF N D NFLPFNENDSEEMLLYGLISEGT   S  
Sbjct: 1   MDYSVFFSPVSDFSSESSFGSPESSFTNLDHNFLPFNENDSEEMLLYGLISEGTYESSDT 60

Query: 61  --GPVRVKEEEVDSVREASPKREKAYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAE 120
             G V+VKEEEVDS+ E SPK+E+AYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAE
Sbjct: 61  SIGTVQVKEEEVDSIGEESPKKERAYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAE 120

Query: 121 AAALAYDQAAFSMRGAAAILNFPVERVRESLKEMNSG----GDGFADDGGSPVIALKRKH 180
           AAALAYDQAAFSMRGAAAILNFPV+RVRESLKEMN G    G+  A+DGGSPV+ALKRKH
Sbjct: 121 AAALAYDQAAFSMRGAAAILNFPVDRVRESLKEMNGGSGGSGNSLAEDGGSPVVALKRKH 180

Query: 181 SIKRKAISKKSKERDARIQNMVVFEDLGPEYLEELLGSSQSGS-SCSF 220
           SI+RKAISKKSKERD RIQN+VV EDLG EYLEELLGSSQS + SCSF
Sbjct: 181 SIRRKAISKKSKERDVRIQNVVVLEDLGAEYLEELLGSSQSDNPSCSF 228

[Close]

BLAST of Sed0020540 vs. ExPASy TrEMBL
Match: A0A1S4DSE7 (ethylene-responsive transcription factor 1B OS=Cucumis melo OX=3656 GN=LOC103483599 PE=4 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 1.1e-92
Identity = 188/228 (82.46%), Postives = 200/228 (87.72%), Query Frame = 0


Query: 1   MDYSVFFSQYSDISTESSFGSPESSFMNSDQNFLPFNENDSEEMLLYGLISEGTLGGS-- 60
           MDYSVFFS  SD S+ESSFGSPESSF N D NFLPFNENDSEEMLLYGLISEGT   S  
Sbjct: 1   MDYSVFFSPVSDFSSESSFGSPESSFTNLDHNFLPFNENDSEEMLLYGLISEGTYESSDT 60

Query: 61  --GPVRVKEEEVDSVREASPKREKAYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAE 120
             G V+VKEEEVDS+ E SPK+E+AYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAE
Sbjct: 61  SIGTVQVKEEEVDSIGEESPKKERAYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAE 120

Query: 121 AAALAYDQAAFSMRGAAAILNFPVERVRESLKEMNSG----GDGFADDGGSPVIALKRKH 180
           AAALAYDQAAFSMRGAAAILNFPV+RVRESLKEMN G    G+  A+DGGSPV+ALKRKH
Sbjct: 121 AAALAYDQAAFSMRGAAAILNFPVDRVRESLKEMNGGSGGSGNSLAEDGGSPVVALKRKH 180

Query: 181 SIKRKAISKKSKERDARIQNMVVFEDLGPEYLEELLGSSQSGS-SCSF 220
           SI+RKAISKKSKERD RIQN+VV EDLG EYLEELLGSSQS + SCSF
Sbjct: 181 SIRRKAISKKSKERDVRIQNVVVLEDLGAEYLEELLGSSQSDNPSCSF 228

[Close]

BLAST of Sed0020540 vs. ExPASy TrEMBL
Match: A0A6J1DC08 (ethylene-responsive transcription factor 1B OS=Momordica charantia OX=3673 GN=LOC111018935 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 2.5e-92
Identity = 187/221 (84.62%), Postives = 196/221 (88.69%), Query Frame = 0


Query: 1   MDYSVFFSQYSDISTESSFGSPESSFMNSDQNFLPFNENDSEEMLLYGLISEGTLGGSGP 60
           MD S FFS  SD S+ESSFGSPESSFMN D  FLPFNENDSEEMLLY LISEGT GG   
Sbjct: 1   MDSSGFFSPASDFSSESSFGSPESSFMNLDHYFLPFNENDSEEMLLYELISEGTQGG--- 60

Query: 61  VRVKEEEVDSVREASPKREKAYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAAAL 120
           VRVKEEEVDSV E SPK+E++YRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAAAL
Sbjct: 61  VRVKEEEVDSVGEESPKKERSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAAAL 120

Query: 121 AYDQAAFSMRGAAAILNFPVERVRESLKEMN--SGGDGFADDGGSPVIALKRKHSIKRKA 180
           AYDQAAFSMRGAAAILNFPV+RVRESLKEMN   GG G  DDGGSPV+ALKRKHSI+RKA
Sbjct: 121 AYDQAAFSMRGAAAILNFPVDRVRESLKEMNCSGGGGGGGDDGGSPVVALKRKHSIRRKA 180

Query: 181 ISKKSKERDARIQNMVVFEDLGPEYLEELLGSSQSGSSCSF 220
           ISKKSKERD RIQN+VV EDLG EYLEELLGSSQSGS CS+
Sbjct: 181 ISKKSKERDVRIQNVVVLEDLGAEYLEELLGSSQSGSPCSY 218

[Close]

BLAST of Sed0020540 vs. ExPASy TrEMBL
Match: A0A0A0L750 (Ethylene-responsive transcription factor 1B OS=Cucumis sativus OX=3659 GN=Csa_3G135120 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 4.0e-90
Identity = 184/228 (80.70%), Postives = 195/228 (85.53%), Query Frame = 0


Query: 1   MDYSVFFSQYSDISTESSFGSPESSFMNSDQNFLPFNENDSEEMLLYGLISEGTL----G 60
           MDYS F S  SD S+ESSFGSPESSF N D NFLPFNENDSEEMLLYGLISEGT      
Sbjct: 1   MDYSAFISPLSDFSSESSFGSPESSFTNLDHNFLPFNENDSEEMLLYGLISEGTYESFDT 60

Query: 61  GSGPVRVKEEEVDSVREASPKREKAYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAE 120
             G V+VKEEEVDS+ E SPK+E+AYRGVRRRPWGKFAAEIRDSTRHG RVWLGTFDSAE
Sbjct: 61  SIGTVQVKEEEVDSIGEESPKKERAYRGVRRRPWGKFAAEIRDSTRHGTRVWLGTFDSAE 120

Query: 121 AAALAYDQAAFSMRGAAAILNFPVERVRESLKEMNSG----GDGFADDGGSPVIALKRKH 180
           AAALAYDQAAFSMRGAAAILNFPV+RVRESLKEMN+G    GD  A+DGGSPV+ALKRKH
Sbjct: 121 AAALAYDQAAFSMRGAAAILNFPVDRVRESLKEMNAGSGGSGDSLAEDGGSPVVALKRKH 180

Query: 181 SIKRKAISKKSKERDARIQNMVVFEDLGPEYLEELLGSSQSGS-SCSF 220
           SI+RKAI KKSKERD RIQ +VV EDLG EYLEELLGSSQS S SCSF
Sbjct: 181 SIRRKAIGKKSKERDVRIQTVVVLEDLGTEYLEELLGSSQSDSPSCSF 228

[Close]

BLAST of Sed0020540 vs. ExPASy TrEMBL
Match: A0A6J1II54 (ethylene-responsive transcription factor 1B-like OS=Cucurbita maxima OX=3661 GN=LOC111474018 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 1.2e-89
Identity = 181/223 (81.17%), Postives = 193/223 (86.55%), Query Frame = 0


Query: 1   MDYSVFFSQYSDISTESSFGSPESSFMNSDQNFLPFNENDSEEMLLYGLISEG----TLG 60
           MDYS FFS  SD S+ESSF SPESSF+N D NFLPFNENDSEEMLLY LISEG    +  
Sbjct: 1   MDYSGFFSPASDFSSESSFDSPESSFINLDHNFLPFNENDSEEMLLYELISEGRQDSSEK 60

Query: 61  GSGPVRVKEEEVDSVREASPKREKAYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAE 120
           G G VRVKEEEVDSV E SPK+E++YRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAE
Sbjct: 61  GIGAVRVKEEEVDSVGEESPKKERSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAE 120

Query: 121 AAALAYDQAAFSMRGAAAILNFPVERVRESLKEMNSGGDGF--ADDGGSPVIALKRKHSI 180
           AAALAYDQAAF+MRGAAAILNFPV+RVRESLKEMN  GDG+  A+DGGSPVIALKRKHS+
Sbjct: 121 AAALAYDQAAFAMRGAAAILNFPVDRVRESLKEMNCSGDGYGLAEDGGSPVIALKRKHSV 180

Query: 181 KRKAISKKSKERDARIQNMVVFEDLGPEYLEELLGSSQSGSSC 218
           +R  ISKK KERD RIQNMVV EDLG EYLEELLG SQSGS C
Sbjct: 181 RRNGISKKKKERDVRIQNMVVLEDLGTEYLEELLGCSQSGSPC 223

[Close]

BLAST of Sed0020540 vs. TAIR 10
Match: AT3G23240.1 (ethylene response factor 1 )

HSP 1 Score: 220.3 bits (560), Expect = 1.5e-57
Identity = 129/223 (57.85%), Postives = 159/223 (71.30%), Query Frame = 0


Query: 1   MDYSVFFSQYSDISTESSFGSPESSFMNSDQN--FLPFNENDSEEMLLYGLISEGTLGGS 60
           MD  +  S +S  S E S GS   SF +S  N   LPFNENDSEEM LYGLI + T    
Sbjct: 1   MDPFLIQSPFSGFSPEYSIGSSPDSFSSSSSNNYSLPFNENDSEEMFLYGLIEQSTQQTY 60

Query: 61  GPVRVKEEEVDSVREASPKREKAYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAA 120
                ++  + SV  +S K EK+YRGVRRRPWGKFAAEIRDSTR+GIRVWLGTF+SAE A
Sbjct: 61  IDSDSQDLPIKSV--SSRKSEKSYRGVRRRPWGKFAAEIRDSTRNGIRVWLGTFESAEEA 120

Query: 121 ALAYDQAAFSMRGAAAILNFPVERVRESLKEMNSGGDGFADDGGSPVIALKRKHSIKRKA 180
           ALAYDQAAFSMRG++AILNF  ERV+ESL E+        +DG SPV+ALKRKHS++R+ 
Sbjct: 121 ALAYDQAAFSMRGSSAILNFSAERVQESLSEIKY----TYEDGCSPVVALKRKHSMRRRM 180

Query: 181 ISKKSKE-----RDARIQNMVVFEDLGPEYLEELLGSSQSGSS 217
            +KK+K+     R  ++ N+VVFEDLG +YLEELLGSS++  +
Sbjct: 181 TNKKTKDSDFDHRSVKLDNVVVFEDLGEQYLEELLGSSENSGT 217

[Close]

BLAST of Sed0020540 vs. TAIR 10
Match: AT2G31230.1 (ethylene-responsive element binding factor 15 )

HSP 1 Score: 158.7 bits (400), Expect = 5.4e-39
Identity = 112/253 (44.27%), Postives = 142/253 (56.13%), Query Frame = 0


Query: 7   FSQYSDISTESSFGSPESSFMNSDQNFL------------------PFNENDSEEMLLYG 66
           +SQ S  S+ SS+ S + S + ++  FL                   F   +S EM++  
Sbjct: 3   YSQSSMYSSPSSWSSSQESLLWNESCFLDQSSEPQAFFCPNYDYSDDFFSFESPEMMIKE 62

Query: 67  LISEGTLGGSGPVRVKEEEVDSVREASPKREKAYRGVRRRPWGKFAAEIRDSTRHGIRVW 126
            I  G +  S     +EEE   + E     E++YRGVR+RPWGKFAAEIRDSTR+GIRVW
Sbjct: 63  EIQNGDVSNS-----EEEEKVGIDE-----ERSYRGVRKRPWGKFAAEIRDSTRNGIRVW 122

Query: 127 LGTFDSAEAAALAYDQAAFSMRGAAAILNFPVERVRESLKEMNSGGDGFADDGGSPVIAL 186
           LGTFD AE AALAYDQAAF+ +G+ A LNFPVE VRESLK+M +       DGGSPV+AL
Sbjct: 123 LGTFDKAEEAALAYDQAAFATKGSLATLNFPVEVVRESLKKMENVN---LHDGGSPVMAL 182

Query: 187 KRKHSIKRKAISKK----------------------SKERDARIQN--------MVVFED 212
           KRKHS++ +   KK                      S  R +  Q+        +VVFED
Sbjct: 183 KRKHSLRNRPRGKKRSSSSSSSSSNSSSCSSSSSTSSTSRSSSKQSVVKQESGTLVVFED 242

[Close]

BLAST of Sed0020540 vs. TAIR 10
Match: AT1G06160.1 (octadecanoid-responsive Arabidopsis AP2/ERF 59 )

HSP 1 Score: 149.1 bits (375), Expect = 4.3e-36
Identity = 102/255 (40.00%), Postives = 139/255 (54.51%), Query Frame = 0


Query: 1   MDYSVFF--SQYSDISTESSFGSPESSFM--------NSDQNFLPFNENDSEEMLLYGLI 60
           M+Y   F   ++S  ++ SS  S + SF+        + DQ+FL  +  D+     +   
Sbjct: 1   MEYQTNFLSGEFSPENSSSSSWSSQESFLWEESFLHQSFDQSFLLSSPTDNYCDDFFAFE 60

Query: 61  SEGTLGGSGPVRVKEEEVDSVREASPKREKAYRGVRRRPWGKFAAEIRDSTRHGIRVWLG 120
           S           + +EE      A+ + EK+YRGVR+RPWGKFAAEIRDSTR GIRVWLG
Sbjct: 61  SS----------IIKEEGKEATVAAEEEEKSYRGVRKRPWGKFAAEIRDSTRKGIRVWLG 120

Query: 121 TFDSAEAAALAYDQAAFSMRGAAAILNFPVERVRESLKEMNSGGDGFADDGGSPVIALKR 180
           TFD+AEAAALAYDQAAF+++G+ A+LNFP + V ESL++M +      +DG SPVIALKR
Sbjct: 121 TFDTAEAAALAYDQAAFALKGSLAVLNFPADVVEESLRKMENVN---LNDGESPVIALKR 180

Query: 181 KHSIKRKAISKKSKERDARIQN-----------------------------------MVV 211
           KHS++ +   KK     + + +                                   +VV
Sbjct: 181 KHSMRNRPRGKKKSSSSSTLTSSPSSSSSYSSSSSSSSLSSRSRKQSVVMTQESNTTLVV 240

[Close]

BLAST of Sed0020540 vs. TAIR 10
Match: AT4G17500.1 (ethylene responsive element binding factor 1 )

HSP 1 Score: 115.2 bits (287), Expect = 6.8e-26
Identity = 65/136 (47.79%), Postives = 84/136 (61.76%), Query Frame = 0


Query: 34  LPFNENDSEEMLLYGLISEGTLGGSGP----------------------------VRVKE 93
           LP  ENDSE+ML+YG++++   GG  P                            V VK+
Sbjct: 71  LPLKENDSEDMLVYGILNDAFHGGWEPSSSSSDEDRSSFPSVKIETPESFAAVDSVPVKK 130

Query: 94  EEVDSVREA-SPKREKAYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAAALAYDQ 141
           E+   V  A +  + K YRGVR+RPWGKFAAEIRD  ++G RVWLGTF++AE AALAYD+
Sbjct: 131 EKTSPVSAAVTAAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDR 190

[Close]

BLAST of Sed0020540 vs. TAIR 10
Match: AT5G47220.1 (ethylene responsive element binding factor 2 )

HSP 1 Score: 112.5 bits (280), Expect = 4.4e-25
Identity = 81/207 (39.13%), Postives = 106/207 (51.21%), Query Frame = 0


Query: 21  SPESSFMNSDQNFLPFNENDSEEMLLYGLISE-----------GTLGGSGPVRVKEEEVD 80
           S  SS        LP  ENDSE+ML+YGL+ +             L     V+V+  E  
Sbjct: 35  STPSSCFTESWGGLPLKENDSEDMLVYGLLKDAFHFDTSSSDLSCLFDFPAVKVEPTENF 94

Query: 81  SVREASPK----------REKAYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAAA 140
           +  E  PK          + K YRGVR+RPWGKFAAEIRD  ++G RVWLGTF++AE AA
Sbjct: 95  TAMEEKPKKAIPVTETAVKAKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAA 154

Query: 141 LAYDQAAFSMRGAAAILNFPVERVRESLKEMNSGGDGFADDGGSPV-IALKRKHSIKRKA 200
           LAYD AAF MRG+ A+LNFP+         +NSG          PV I  KR  S    +
Sbjct: 155 LAYDIAAFRMRGSRALLNFPL--------RVNSGEP-------DPVRITSKRSSSSSSSS 214

Query: 201 ISKKSKERDARIQNMVVFEDLGPEYLE 206
            S  S   + +++     E+L  E ++
Sbjct: 215 SSSTSSSENGKLKRRRKAENLTSEVVQ 226

The following BLAST results are available for this feature:

BLAST of Sed0020540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016898922.1	2.3e-92	82.46	PREDICTED: ethylene-responsive transcription factor 1B [Cucumis melo] >KAA004925...	[more]
XP_022150897.1	5.1e-92	84.62	ethylene-responsive transcription factor 1B [Momordica charantia]	[more]
XP_038879960.1	1.5e-91	81.50	ethylene-response factor C3-like [Benincasa hispida]	[more]
XP_004134068.1	8.2e-90	80.70	ethylene-response factor C3 [Cucumis sativus] >KGN56864.1 hypothetical protein C...	[more]
KAG7028832.1	1.1e-89	81.25	Ethylene-responsive transcription factor 1B, partial [Cucurbita argyrosperma sub...	[more]

BLAST of Sed0020540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LDC8	2.1e-56	57.85	Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana OX=3702 GN=E...	[more]
A0A3Q7I5Y9	9.2e-52	60.22	Ethylene-response factor C3 OS=Solanum lycopersicum OX=4081 GN=ERF.C.3 PE=2 SV=1	[more]
Q8VYM0	7.6e-38	44.27	Ethylene-responsive transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=E...	[more]
Q9LND1	6.0e-35	40.00	Ethylene-responsive transcription factor ERF094 OS=Arabidopsis thaliana OX=3702 ...	[more]
O04681	6.0e-27	55.46	Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicu...	[more]

BLAST of Sed0020540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U4J3	1.1e-92	82.46	Ethylene-responsive transcription factor 1B OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S4DSE7	1.1e-92	82.46	ethylene-responsive transcription factor 1B OS=Cucumis melo OX=3656 GN=LOC103483...	[more]
A0A6J1DC08	2.5e-92	84.62	ethylene-responsive transcription factor 1B OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A0A0L750	4.0e-90	80.70	Ethylene-responsive transcription factor 1B OS=Cucumis sativus OX=3659 GN=Csa_3G...	[more]
A0A6J1II54	1.2e-89	81.17	ethylene-responsive transcription factor 1B-like OS=Cucurbita maxima OX=3661 GN=...	[more]

BLAST of Sed0020540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23240.1	1.5e-57	57.85	ethylene response factor 1	[more]
AT2G31230.1	5.4e-39	44.27	ethylene-responsive element binding factor 15	[more]
AT1G06160.1	4.3e-36	40.00	octadecanoid-responsive Arabidopsis AP2/ERF 59	[more]
AT4G17500.1	6.8e-26	47.79	ethylene responsive element binding factor 1	[more]
AT5G47220.1	4.4e-25	39.13	ethylene responsive element binding factor 2	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 105..121 score: 65.03 coord: 82..93 score: 72.73
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 81..145 e-value: 7.8E-34 score: 128.4
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 82..131 e-value: 2.0E-14 score: 53.6
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 81..139 score: 23.077003
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 82..140 e-value: 9.21786E-19 score: 75.0007
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 80..141 e-value: 1.1E-25 score: 91.5
None	No IPR available	PANTHER	PTHR31190:SF132	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B	coord: 25..210
IPR044808	Ethylene-responsive transcription factor	PANTHER	PTHR31190	DNA-BINDING DOMAIN	coord: 25..210
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 81..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0020540.1	Sed0020540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009873	ethylene-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity