Sed0020529 (gene) Chayote v1

Overview


Name	Sed0020529
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Pentatricopeptide repeat-containing protein
Location	LG09: 35589194 .. 35592561 (+)
RNA-Seq Expression	Sed0020529
Synteny	Sed0020529

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCCTCACCGTTGCCCTAATTTCAAAACTCGACATTTGTAGCGACGATGCTCCGCTCCCTTAGACCATTTCTAGCGACGGCCGGCCGCCGATATTCCGGCGAAGCCTCCGCCGCCGACACTGTACTAGAAGGCGGCTCCTGCACAGGCGGCGGCGGTAGTCGAGACACGCTTGGGCGCAGGCTCATGAGCCTTGCTTTCCCCAAACGCAGCGCCGTGATTGCCATCCAGAAATGGAAAGACGAGGGCCACACTGTTCGCAAGTACGAGCTCAACCGCATCGTTCGTGAGCTTCGCAAGCTCAAGCGCTACAAGCACGCACTTGAGGTATTTGATTTTATTTTTCATTATTTTTCTATGACTTAGGTGTTTGTTTTGATTTTGTGGTCTGAAGGAACTTGTATTTTGCTTGAGCTATGGATCTTTAGTCATGAATGAATTAGAGTCAATCCAGCTGATGCTTGAGTAGTTTATATTTTGCCTCTGTTTAATTTAGATGTATATGGATTGGGTTAATACAAAACTGAACCGAAAACAAACTGGGGACGACGAAACCGAAGCAAAATTTAACATTGAGATGAAAACTGATAACCGAATGAAAATCGAACCGATGGTTTTGTCTTTAATTGGACGATTCGGTTCAGTTATTTGAAAACCAAATGGTTCGGTTTGGTTGTTTTATCTAACTATAGAGACTAAATTCTAATTTTTAAAATGGCCCAAAACCGAACAAAACGAAAGTGAAATCACCCCCACTTCCGCATATTTAATCTGCCAACGATTACGAATGTAAATGATTGTTTTTTAGGTTTTATCTAACTATAGAGACTAAATTCTAATTTTTAAAATTATAGTGACTAAATTGTAACTTTCTCCGAACAAATGGACTAAAATCTAGCTTTTAAATTCATAGGGGTTGTTTGTTTAACATATTTAGGTAGGATTTAGCCTAAGGAGTTAATTGAAGAGTTATGTTGAGTAGTTAAAAATTAAGAGTTGTAGCCAAAAACTTGTTTGGATGTAGTTTTTGTGTAGAGGAGTTAGAGTAAAAAATCTTAGTTGGATGTAGATTTAAAATGAGTAGTTATTTTTAGTGGTTAAAAATGAGTTTTTTTTATTGATTTGAAATGAATGATTAATAATAAGTGGTTAGAAATGATTGAGTAGTTATAAATAAATGATTAAAAATGAATGGTTAGAAATGAGAGTTCTTTTTAAAAGTAAATATGAGGAGGAGTTAGTAAAAACTCGTTTGGATGTAGGTTTTCGAAGAGGAGTTAATAAATACTAAAACTAAATTCTACCCAAACAAACAGCCCCATGGGGACTACACTAAATTCTAACTTTGTAAGTGGGACTAAATTTGTAATTTATCAAACAAAAAAGATATATATATATATATATATATATATATAGAGGTGAATAAAATTCTCTGACCTGGCATTTTTCTTTCTGTTCATTAACTTTTATGATCTGAAGATGGCCTTTGAGTAATCTATCTGTTGCACTGTACAGATTTGTGAATGGATGACATTACAGAAATATATAAAGCTGCTACCTGGCGACTATGCAGTTCATCTGGATTTGATTTCAAAAATCCGCGGCCTGAACAGTGCCGAAAAGTTTTTCGAGGATCTTCCTGAAAAAATGAGAGATCAATCTGCCTGCACAGCTCTTCTTCATGTGTATGTGCAAAATAATCTATCCGAAAAGGCTAAGGCTCTAATGGAGAAAATGTCTGAATGTGGTTTCTTGAAAAGTCCTCTTTCTTTCAACCACATGCTATCTCTTCACGTCTCAAACAAGCAACTAGAGAAAGTTCCAGCTCTGGTTCAAGAATTAAAGAAGAACACGAAACCGGACGTGGTAACGTACAATCTTTTGTTGAAGGTTTGCACTTTGCAGAATGATGTTGAAGCTGCAGAGAACATTTTCCTCGAGATGAAAAAGACGAAGATTGAACCGGATTGGGTATCGTTCAGCACATTAGCTAACTTGTATTCCAAAAACCAGCTTACTGAAAAAGCAGCATCCACTTTGAAGGAGATGGAGAAAATTGCATCTATGAAAAACAGGATTTCATTCTCATCTCTTCTTAGCTTATATACTAATTTGGGAGATAAGGATGGAGTTTGCAGGATATGGAAAAAGATGAAGTCGTCTTTTCGAAAGATGAGTGATAGTGAGTATAGTTGCATGATATCATCTCTTGTGAAACTTGACAAGCTCGAGGAAGCTGAGAAACTCTATACCGAATGGGAGTCGGTTTCTGGGACGGGTGATACTCGGGTTCCAAATATCTTGCTTGCAGCTTATATCAACAAAAACCAAATGGAACAAGCTGAGAGTTTCTACGATCGGATGTCGGTAAAAGGAATGGCTCCATCTTACACCACTTGGGAGCTCCTCACATACGGTTATTTGAAAGAGAACCAGATGAAGAAAGTGCTGCATTTCTTCAAGAATGCTGTTGGTAGTGTAAAGAAATGGAATGCAGACGAGAAGTTGATTAAAGGAGTTTGTAAGAAACTCGAGGAGCAGGGTAACATCGAAGGGGCCGAGCAGTTGCTGATTATTCTTAGAAATGCTGATCATGTGGATACTGAGATGTATAATTCTCTCTTGCGGACCTATGCAAAAGCTGGTAAAATGCCACTCATTGTTGCTGAAAGAATGGAAATGGACAATGTTCAGTTGAATGAAGAGACTCGGGAGCTTCTCAAGCTGACCGAACTAACCGAACTCGAAAAAACGAACGAAACTAACCGAACTAACTCAATTCCATCAGTTTGAAGTGTACGATTCGGTTGGTTTGGAAATAGTGTGATAGATTTTGGTGGTTCATTTCGGTTTAGGTGGTTGGTTGTCTATTAGAGCCAGATCAGATTTAAAGAAGGCTCGGTTTCCGCCTCTTTCTTTCTATTGTCCCTAAATTGACATTTTGGTTGACATCGGCCGAAAAGCCGACCCGATCTAAACCACTCACACCCCGACTTTTTACTCGTTAATTTTCGGAATTTACTCTGAGAGGTTGCGAAATCTGAGACAGTTTTCTCTGCTGCTACAACTGTTTTGTGTGCTATCTTTTACAATCAACTAAATTCAGAAGCTGCATGTGGAGATGATGCTGCCGCGGCAAGATGTTTTGATGTACGCTGGTCAGTACAACTTATTAAAAAAAAAAATGAAGTTCCTTTAATGTTATATTTTAGATCTCAATTACTTGCTAGGATTGAATTGAATAAAGCATGTAACTAATTTTTTAGCCTTCTTAATAAAGTTAGCTGAAAAAGTGAGGGATTTCATGTTTATGAGAGTTTAGTCATCATTTTTGGAGCACATTTTCTGTTCATTTATAGTAATTAAATGC

mRNA sequence

TCCCTCACCGTTGCCCTAATTTCAAAACTCGACATTTGTAGCGACGATGCTCCGCTCCCTTAGACCATTTCTAGCGACGGCCGGCCGCCGATATTCCGGCGAAGCCTCCGCCGCCGACACTGTACTAGAAGGCGGCTCCTGCACAGGCGGCGGCGGTAGTCGAGACACGCTTGGGCGCAGGCTCATGAGCCTTGCTTTCCCCAAACGCAGCGCCGTGATTGCCATCCAGAAATGGAAAGACGAGGGCCACACTGTTCGCAAGTACGAGCTCAACCGCATCGTTCGTGAGCTTCGCAAGCTCAAGCGCTACAAGCACGCACTTGAGATTTGTGAATGGATGACATTACAGAAATATATAAAGCTGCTACCTGGCGACTATGCAGTTCATCTGGATTTGATTTCAAAAATCCGCGGCCTGAACAGTGCCGAAAAGTTTTTCGAGGATCTTCCTGAAAAAATGAGAGATCAATCTGCCTGCACAGCTCTTCTTCATGTGTATGTGCAAAATAATCTATCCGAAAAGGCTAAGGCTCTAATGGAGAAAATGTCTGAATGTGGTTTCTTGAAAAGTCCTCTTTCTTTCAACCACATGCTATCTCTTCACGTCTCAAACAAGCAACTAGAGAAAGTTCCAGCTCTGGTTCAAGAATTAAAGAAGAACACGAAACCGGACGTGGTAACGTACAATCTTTTGTTGAAGGTTTGCACTTTGCAGAATGATGTTGAAGCTGCAGAGAACATTTTCCTCGAGATGAAAAAGACGAAGATTGAACCGGATTGGGTATCGTTCAGCACATTAGCTAACTTGTATTCCAAAAACCAGCTTACTGAAAAAGCAGCATCCACTTTGAAGGAGATGGAGAAAATTGCATCTATGAAAAACAGGATTTCATTCTCATCTCTTCTTAGCTTATATACTAATTTGGGAGATAAGGATGGAGTTTGCAGGATATGGAAAAAGATGAAGTCGTCTTTTCGAAAGATGAGTGATAGTGAGTATAGTTGCATGATATCATCTCTTGTGAAACTTGACAAGCTCGAGGAAGCTGAGAAACTCTATACCGAATGGGAGTCGGTTTCTGGGACGGGTGATACTCGGGTTCCAAATATCTTGCTTGCAGCTTATATCAACAAAAACCAAATGGAACAAGCTGAGAGTTTCTACGATCGGATGTCGGTAAAAGGAATGGCTCCATCTTACACCACTTGGGAGCTCCTCACATACGGTTATTTGAAAGAGAACCAGATGAAGAAAGTGCTGCATTTCTTCAAGAATGCTGTTGGTAGTGTAAAGAAATGGAATGCAGACGAGAAGTTGATTAAAGGAGTTTGTAAGAAACTCGAGGAGCAGGGTAACATCGAAGGGGCCGAGCAGTTGCTGATTATTCTTAGAAATGCTGATCATGTGGATACTGAGATGTATAATTCTCTCTTGCGGACCTATGCAAAAGCTGGTAAAATGCCACTCATTGTTGCTGAAAGAATGGAAATGGACAATGTTCAGTTGAATGAAGAGACTCGGGAGCTTCTCAAGCTGACCGAACTAACCGAACTCGAAAAAACGAACGAAACTAACCGAACTAACTCAATTCCATCAGTTTGAAGTGTACGATTCGGTTGGTTTGGAAATAGTGTGATAGATTTTGGTGGTTCATTTCGGTTTAGGTGGTTGGTTGTCTATTAGAGCCAGATCAGATTTAAAGAAGGCTCGGTTTCCGCCTCTTTCTTTCTATTGTCCCTAAATTGACATTTTGGTTGACATCGGCCGAAAAGCCGACCCGATCTAAACCACTCACACCCCGACTTTTTACTCGTTAATTTTCGGAATTTACTCTGAGAGGTTGCGAAATCTGAGACAGTTTTCTCTGCTGCTACAACTGTTTTGTGTGCTATCTTTTACAATCAACTAAATTCAGAAGCTGCATGTGGAGATGATGCTGCCGCGGCAAGATGTTTTGATGTACGCTGGTCAGTACAACTTATTAAAAAAAAAAATGAAGTTCCTTTAATGTTATATTTTAGATCTCAATTACTTGCTAGGATTGAATTGAATAAAGCATGTAACTAATTTTTTAGCCTTCTTAATAAAGTTAGCTGAAAAAGTGAGGGATTTCATGTTTATGAGAGTTTAGTCATCATTTTTGGAGCACATTTTCTGTTCATTTATAGTAATTAAATGC

Coding sequence (CDS)

ATGCTCCGCTCCCTTAGACCATTTCTAGCGACGGCCGGCCGCCGATATTCCGGCGAAGCCTCCGCCGCCGACACTGTACTAGAAGGCGGCTCCTGCACAGGCGGCGGCGGTAGTCGAGACACGCTTGGGCGCAGGCTCATGAGCCTTGCTTTCCCCAAACGCAGCGCCGTGATTGCCATCCAGAAATGGAAAGACGAGGGCCACACTGTTCGCAAGTACGAGCTCAACCGCATCGTTCGTGAGCTTCGCAAGCTCAAGCGCTACAAGCACGCACTTGAGATTTGTGAATGGATGACATTACAGAAATATATAAAGCTGCTACCTGGCGACTATGCAGTTCATCTGGATTTGATTTCAAAAATCCGCGGCCTGAACAGTGCCGAAAAGTTTTTCGAGGATCTTCCTGAAAAAATGAGAGATCAATCTGCCTGCACAGCTCTTCTTCATGTGTATGTGCAAAATAATCTATCCGAAAAGGCTAAGGCTCTAATGGAGAAAATGTCTGAATGTGGTTTCTTGAAAAGTCCTCTTTCTTTCAACCACATGCTATCTCTTCACGTCTCAAACAAGCAACTAGAGAAAGTTCCAGCTCTGGTTCAAGAATTAAAGAAGAACACGAAACCGGACGTGGTAACGTACAATCTTTTGTTGAAGGTTTGCACTTTGCAGAATGATGTTGAAGCTGCAGAGAACATTTTCCTCGAGATGAAAAAGACGAAGATTGAACCGGATTGGGTATCGTTCAGCACATTAGCTAACTTGTATTCCAAAAACCAGCTTACTGAAAAAGCAGCATCCACTTTGAAGGAGATGGAGAAAATTGCATCTATGAAAAACAGGATTTCATTCTCATCTCTTCTTAGCTTATATACTAATTTGGGAGATAAGGATGGAGTTTGCAGGATATGGAAAAAGATGAAGTCGTCTTTTCGAAAGATGAGTGATAGTGAGTATAGTTGCATGATATCATCTCTTGTGAAACTTGACAAGCTCGAGGAAGCTGAGAAACTCTATACCGAATGGGAGTCGGTTTCTGGGACGGGTGATACTCGGGTTCCAAATATCTTGCTTGCAGCTTATATCAACAAAAACCAAATGGAACAAGCTGAGAGTTTCTACGATCGGATGTCGGTAAAAGGAATGGCTCCATCTTACACCACTTGGGAGCTCCTCACATACGGTTATTTGAAAGAGAACCAGATGAAGAAAGTGCTGCATTTCTTCAAGAATGCTGTTGGTAGTGTAAAGAAATGGAATGCAGACGAGAAGTTGATTAAAGGAGTTTGTAAGAAACTCGAGGAGCAGGGTAACATCGAAGGGGCCGAGCAGTTGCTGATTATTCTTAGAAATGCTGATCATGTGGATACTGAGATGTATAATTCTCTCTTGCGGACCTATGCAAAAGCTGGTAAAATGCCACTCATTGTTGCTGAAAGAATGGAAATGGACAATGTTCAGTTGAATGAAGAGACTCGGGAGCTTCTCAAGCTGACCGAACTAACCGAACTCGAAAAAACGAACGAAACTAACCGAACTAACTCAATTCCATCAGTTTGA

Protein sequence

MLRSLRPFLATAGRRYSGEASAADTVLEGGSCTGGGGSRDTLGRRLMSLAFPKRSAVIAIQKWKDEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKYIKLLPGDYAVHLDLISKIRGLNSAEKFFEDLPEKMRDQSACTALLHVYVQNNLSEKAKALMEKMSECGFLKSPLSFNHMLSLHVSNKQLEKVPALVQELKKNTKPDVVTYNLLLKVCTLQNDVEAAENIFLEMKKTKIEPDWVSFSTLANLYSKNQLTEKAASTLKEMEKIASMKNRISFSSLLSLYTNLGDKDGVCRIWKKMKSSFRKMSDSEYSCMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNILLAAYINKNQMEQAESFYDRMSVKGMAPSYTTWELLTYGYLKENQMKKVLHFFKNAVGSVKKWNADEKLIKGVCKKLEEQGNIEGAEQLLIILRNADHVDTEMYNSLLRTYAKAGKMPLIVAERMEMDNVQLNEETRELLKLTELTELEKTNETNRTNSIPSV

Homology

[Close]

BLAST of Sed0020529 vs. NCBI nr
Match: XP_023004520.1 (pentatricopeptide repeat-containing protein At4g02820, mitochondrial [Cucurbita maxima])

HSP 1 Score: 851.3 bits (2198), Expect = 4.4e-243
Identity = 447/534 (83.71%), Postives = 482/534 (90.26%), Query Frame = 0


Query: 1   MLRSLRPFLATAGRRYSGEASAA---DTVLEGGSCTGG--GGSRDTLGRRLMSLAFPKRS 60
           M RS R +LATA RR+SGEA AA   +T LE  S + G  GG RDTLGRRLMSLAFPKRS
Sbjct: 1   MHRSSRLYLATAARRFSGEAYAAAVENTKLEAASGSSGTSGGGRDTLGRRLMSLAFPKRS 60

Query: 61  AVIAIQKWKDEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKYIKLLPGDYAVHL 120
           AVIAI+KW++EGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQK +KLLPGDYAVHL
Sbjct: 61  AVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKNMKLLPGDYAVHL 120

Query: 121 DLISKIRGLNSAEKFFEDLPEKMRDQSACTALLHVYVQNNLSEKAKALMEKMSECGFLKS 180
           DLISKIRGL+SAEKFF DLP+KMR QSA T+LLHV+VQNNLSEKA+ALM KMSE GFLKS
Sbjct: 121 DLISKIRGLSSAEKFFMDLPDKMRGQSAYTSLLHVFVQNNLSEKAEALMAKMSEFGFLKS 180

Query: 181 PLSFNHMLSLHVSNKQLEKVPALVQELKKNTKPDVVTYNLLLKVCTLQNDVEAAENIFLE 240
           PLSFNHMLSLH++NK+LEKVPALVQELKKNTKPDVVTYNLLL VCTLQNDVEAAENIFLE
Sbjct: 181 PLSFNHMLSLHITNKRLEKVPALVQELKKNTKPDVVTYNLLLNVCTLQNDVEAAENIFLE 240

Query: 241 MKKTKIEPDWVSFSTLANLYSKNQLTEKAASTLKEMEKIASMKNRISFSSLLSLYTNLGD 300
           MK  KIEPDWVSFSTLANLYSK QLTEKAASTLK+MEK+AS +NRISFSSLLSLYTNLGD
Sbjct: 241 MKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLKKMEKMASKRNRISFSSLLSLYTNLGD 300

Query: 301 KDGVCRIWKKMKSSFRKMSDSEYSCMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNI 360
           KDGVCRIWKKM SSFRKM+DSEY CMISSLVKLDKLE+AEKLYTEWESVSGTGDTRVPNI
Sbjct: 301 KDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEDAEKLYTEWESVSGTGDTRVPNI 360

Query: 361 LLAAYINKNQMEQAESFYDRMSVKGMAPSYTTWELLTYGYLKENQMKKVLHFFKNAVGSV 420
           LLAAYINKNQM+QAESFYDRM++KG+ PSYTTWELLT+GYLKENQM+KVL FFKNAVGSV
Sbjct: 361 LLAAYINKNQMKQAESFYDRMTLKGIIPSYTTWELLTWGYLKENQMEKVLQFFKNAVGSV 420

Query: 421 KKWNADEKLIKGVCKKLEEQGNIEGAEQLLIILRNADHVDTEMYNSLLRTYAKAGKMPLI 480
           KKWNADE+L+KGVCK+LEEQGN EG EQLLIILRNA HVDTE+YNSLLRTYAKAGKMPLI
Sbjct: 421 KKWNADERLVKGVCKRLEEQGNFEGTEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPLI 480

Query: 481 VAERMEMDNVQLNEETRELLKLTE-----------LTELEKTNETNRTNSIPSV 519
           VAERME DNVQLNEE+RELLKLT              E +KTNET++TNS  SV
Sbjct: 481 VAERMEQDNVQLNEESRELLKLTTKMCVSEVSSTFYHEAQKTNETDQTNSTQSV 534

[Close]

BLAST of Sed0020529 vs. NCBI nr
Match: KAG7027261.1 (Pentatricopeptide repeat-containing protein, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 850.9 bits (2197), Expect = 5.8e-243
Identity = 447/534 (83.71%), Postives = 482/534 (90.26%), Query Frame = 0


Query: 1   MLRSLRPFLATAGRRYSGEASAA---DTVLE--GGSCTGGGGSRDTLGRRLMSLAFPKRS 60
           MLRS R +LATA RR+SGEA A    +T LE   GS   GGG RDTLGRRLMSLAFPKRS
Sbjct: 1   MLRSPRLYLATAARRFSGEACAVAVENTTLEAASGSSGTGGGGRDTLGRRLMSLAFPKRS 60

Query: 61  AVIAIQKWKDEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKYIKLLPGDYAVHL 120
           AVIAI+KW++EGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQK +KLLPGDYAVHL
Sbjct: 61  AVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKDMKLLPGDYAVHL 120

Query: 121 DLISKIRGLNSAEKFFEDLPEKMRDQSACTALLHVYVQNNLSEKAKALMEKMSECGFLKS 180
           DLISKIRGL+SAEKFF DLP+KMR QSA T+LLHV+VQNNLSEKA+ALM KMSE GFLKS
Sbjct: 121 DLISKIRGLSSAEKFFMDLPDKMRGQSAYTSLLHVFVQNNLSEKAEALMAKMSEFGFLKS 180

Query: 181 PLSFNHMLSLHVSNKQLEKVPALVQELKKNTKPDVVTYNLLLKVCTLQNDVEAAENIFLE 240
           PLSFNHMLSL+++NK+LEKVPALVQELKKNTKPDVVTYNLLL VCTLQNDVEAAENIFLE
Sbjct: 181 PLSFNHMLSLYITNKRLEKVPALVQELKKNTKPDVVTYNLLLNVCTLQNDVEAAENIFLE 240

Query: 241 MKKTKIEPDWVSFSTLANLYSKNQLTEKAASTLKEMEKIASMKNRISFSSLLSLYTNLGD 300
           MK  KIEPDWVSFSTLANLYSK QLTEKAASTLK+MEK+AS +NRISFSSLLSLYTNLGD
Sbjct: 241 MKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLKKMEKMASKRNRISFSSLLSLYTNLGD 300

Query: 301 KDGVCRIWKKMKSSFRKMSDSEYSCMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNI 360
           KDGVCRIWKKM SSFRKM+DSEY+CMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNI
Sbjct: 301 KDGVCRIWKKMNSSFRKMNDSEYTCMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNI 360

Query: 361 LLAAYINKNQMEQAESFYDRMSVKGMAPSYTTWELLTYGYLKENQMKKVLHFFKNAVGSV 420
           LLAAYINKNQ +QAESFYDRM++KG+ PSYTTWELLT+GYLKENQM+KVL FFKNAVGSV
Sbjct: 361 LLAAYINKNQTKQAESFYDRMTLKGIVPSYTTWELLTWGYLKENQMEKVLQFFKNAVGSV 420

Query: 421 KKWNADEKLIKGVCKKLEEQGNIEGAEQLLIILRNADHVDTEMYNSLLRTYAKAGKMPLI 480
           KKWNADE+L+KGVCK+LEEQGN EGAEQLLIILRNA HVDTE+YNSLLRTYAKAGKMPLI
Sbjct: 421 KKWNADERLVKGVCKRLEEQGNFEGAEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPLI 480

Query: 481 VAERMEMDNVQLNEETRELLKLTE-----------LTELEKTNETNRTNSIPSV 519
           VAERME DNVQLNEE+RELLKLT              E +KT+ T+RTNS  SV
Sbjct: 481 VAERMEQDNVQLNEESRELLKLTSKMCVSEVSSTFYHEAQKTHATDRTNSTQSV 534

[Close]

BLAST of Sed0020529 vs. NCBI nr
Match: XP_022960480.1 (pentatricopeptide repeat-containing protein At4g02820, mitochondrial [Cucurbita moschata])

HSP 1 Score: 849.4 bits (2193), Expect = 1.7e-242
Identity = 446/534 (83.52%), Postives = 480/534 (89.89%), Query Frame = 0


Query: 1   MLRSLRPFLATAGRRYSGEASAA---DTVLE--GGSCTGGGGSRDTLGRRLMSLAFPKRS 60
           MLRS R +LATA RR+SGEA A    +T LE   GS   GGG RDTLGRRLMSLAFPKRS
Sbjct: 1   MLRSPRLYLATAARRFSGEACAVAVENTTLEAASGSSGTGGGGRDTLGRRLMSLAFPKRS 60

Query: 61  AVIAIQKWKDEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKYIKLLPGDYAVHL 120
           AVIAI+KW++EGHTVRKY+LNRIVRELRKLKRYKHALEICEWMTLQK +KLLPGDYAVHL
Sbjct: 61  AVIAIRKWQEEGHTVRKYDLNRIVRELRKLKRYKHALEICEWMTLQKDMKLLPGDYAVHL 120

Query: 121 DLISKIRGLNSAEKFFEDLPEKMRDQSACTALLHVYVQNNLSEKAKALMEKMSECGFLKS 180
           DLISKIRGL+SAEKFF DLP+KMR QSA T+LLHV+VQNNLSEKA+ALM KMSE GFLKS
Sbjct: 121 DLISKIRGLSSAEKFFMDLPDKMRGQSAYTSLLHVFVQNNLSEKAEALMAKMSEFGFLKS 180

Query: 181 PLSFNHMLSLHVSNKQLEKVPALVQELKKNTKPDVVTYNLLLKVCTLQNDVEAAENIFLE 240
           PLSFNHMLSLH++NK+LEKVPALVQELKKNTKPDVVTYNLLL VCTLQNDVEAAENIFLE
Sbjct: 181 PLSFNHMLSLHITNKRLEKVPALVQELKKNTKPDVVTYNLLLNVCTLQNDVEAAENIFLE 240

Query: 241 MKKTKIEPDWVSFSTLANLYSKNQLTEKAASTLKEMEKIASMKNRISFSSLLSLYTNLGD 300
           MK  KIEPDWVSFSTLANLYSK QLTEKAASTLK+MEK+AS +NRISFSSLLSLYTNLGD
Sbjct: 241 MKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLKKMEKMASKRNRISFSSLLSLYTNLGD 300

Query: 301 KDGVCRIWKKMKSSFRKMSDSEYSCMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNI 360
           KDGVCRIWKKM SSFRKM+DSEY CMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNI
Sbjct: 301 KDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNI 360

Query: 361 LLAAYINKNQMEQAESFYDRMSVKGMAPSYTTWELLTYGYLKENQMKKVLHFFKNAVGSV 420
           LLAAYINKNQ +QAESFYDRM++KG+ PSYTTWELLT+GYLKENQM+KVL FFKNAVGSV
Sbjct: 361 LLAAYINKNQTKQAESFYDRMTLKGIIPSYTTWELLTWGYLKENQMEKVLQFFKNAVGSV 420

Query: 421 KKWNADEKLIKGVCKKLEEQGNIEGAEQLLIILRNADHVDTEMYNSLLRTYAKAGKMPLI 480
           KKWN DE+L+KGVCK+LEEQGN EGAEQLLIILRNA HVDTE+YNSLLRTYAKAGKMPLI
Sbjct: 421 KKWNVDERLVKGVCKRLEEQGNFEGAEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPLI 480

Query: 481 VAERMEMDNVQLNEETRELLKLTE-----------LTELEKTNETNRTNSIPSV 519
           VAERME DNVQLNEE+RELLKLT              E +KTN+T+ TNS  SV
Sbjct: 481 VAERMEQDNVQLNEESRELLKLTSKMCVSEVSSTFYHEAQKTNKTDGTNSTQSV 534

[Close]

BLAST of Sed0020529 vs. NCBI nr
Match: XP_023515289.1 (pentatricopeptide repeat-containing protein At4g02820, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 844.7 bits (2181), Expect = 4.1e-241
Identity = 444/526 (84.41%), Postives = 475/526 (90.30%), Query Frame = 0


Query: 1   MLRSLRPFLATAGRRYSGEASAA---DTVLEGGSCTGG--GGSRDTLGRRLMSLAFPKRS 60
           MLRS R +LATA RR+SGEA AA   +T LE  S + G  GG RDTLGRRLMSLAFPKRS
Sbjct: 1   MLRSPRLYLATAARRFSGEAYAAAVENTTLEAASGSSGTSGGGRDTLGRRLMSLAFPKRS 60

Query: 61  AVIAIQKWKDEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKYIKLLPGDYAVHL 120
           AVIAI+KW++EGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQK +KLLPGDYAV L
Sbjct: 61  AVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKDMKLLPGDYAVQL 120

Query: 121 DLISKIRGLNSAEKFFEDLPEKMRDQSACTALLHVYVQNNLSEKAKALMEKMSECGFLKS 180
           DLISKIRGL+SAEKFF DLP+KMR QSA TALLHV+VQNNLSEKA+ALM KMSE GFLKS
Sbjct: 121 DLISKIRGLSSAEKFFVDLPDKMRGQSAYTALLHVFVQNNLSEKAEALMAKMSEFGFLKS 180

Query: 181 PLSFNHMLSLHVSNKQLEKVPALVQELKKNTKPDVVTYNLLLKVCTLQNDVEAAENIFLE 240
           PLSFNHMLSLH++NK+LEKVPALVQELKKNTKPDVVTYNLLL VCTLQNDVEAAENIFLE
Sbjct: 181 PLSFNHMLSLHIANKRLEKVPALVQELKKNTKPDVVTYNLLLNVCTLQNDVEAAENIFLE 240

Query: 241 MKKTKIEPDWVSFSTLANLYSKNQLTEKAASTLKEMEKIASMKNRISFSSLLSLYTNLGD 300
           MK  KIEPDWVSFSTLANLYSK QLTEKAASTLK MEK+AS +NRISFSSLLSLYTNLGD
Sbjct: 241 MKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLKNMEKMASKRNRISFSSLLSLYTNLGD 300

Query: 301 KDGVCRIWKKMKSSFRKMSDSEYSCMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNI 360
           KDGVCRIWKKM SSFRKM+DSEY CMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNI
Sbjct: 301 KDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNI 360

Query: 361 LLAAYINKNQMEQAESFYDRMSVKGMAPSYTTWELLTYGYLKENQMKKVLHFFKNAVGSV 420
           LLAAYINKNQ +QAESFYDRM++KG+ PSYTTWELLT+GYLKENQM+KVL FFKNAVGSV
Sbjct: 361 LLAAYINKNQTKQAESFYDRMTLKGIVPSYTTWELLTWGYLKENQMEKVLQFFKNAVGSV 420

Query: 421 KKWNADEKLIKGVCKKLEEQGNIEGAEQLLIILRNADHVDTEMYNSLLRTYAKAGKMPLI 480
           KKWNADE+L+KGVCK+LEEQGN EGAEQLLIILRNA HVDTE+YNSLLRTYAKAGKMPLI
Sbjct: 421 KKWNADERLVKGVCKRLEEQGNFEGAEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPLI 480

Query: 481 VAERMEMDNVQLNEETRELLKLTE-----------LTELEKTNETN 511
           VAERME DNVQLNEE+RELLKLT              E +KTNET+
Sbjct: 481 VAERMEQDNVQLNEESRELLKLTSKMCVSEVSSTFYHEAQKTNETD 526

[Close]

BLAST of Sed0020529 vs. NCBI nr
Match: KAG6593129.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 839.7 bits (2168), Expect = 1.3e-239
Identity = 434/503 (86.28%), Postives = 467/503 (92.84%), Query Frame = 0


Query: 1   MLRSLRPFLATAGRRYSGEASAA---DTVLE--GGSCTGGGGSRDTLGRRLMSLAFPKRS 60
           MLRS R +LATA RR+SGEA A    +T LE   GS   GGG RDTLGRRLMSLAFPKRS
Sbjct: 1   MLRSPRLYLATAARRFSGEACAVAVENTTLEAASGSSGTGGGGRDTLGRRLMSLAFPKRS 60

Query: 61  AVIAIQKWKDEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKYIKLLPGDYAVHL 120
           AVIAI+KW++EGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQK +KLLPGDYAVHL
Sbjct: 61  AVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKDMKLLPGDYAVHL 120

Query: 121 DLISKIRGLNSAEKFFEDLPEKMRDQSACTALLHVYVQNNLSEKAKALMEKMSECGFLKS 180
           DLISKIRGL+SAEKFF DLP+KMR QSA T+LLHV+VQNNLSEKA+ALM KMSE GFLKS
Sbjct: 121 DLISKIRGLSSAEKFFMDLPDKMRGQSAYTSLLHVFVQNNLSEKAEALMAKMSEFGFLKS 180

Query: 181 PLSFNHMLSLHVSNKQLEKVPALVQELKKNTKPDVVTYNLLLKVCTLQNDVEAAENIFLE 240
           PLSFNHMLSL+++NK LEKVPALVQELKKNTKPDV+TYNLLL VCTLQNDVEAAENIFLE
Sbjct: 181 PLSFNHMLSLYITNKGLEKVPALVQELKKNTKPDVLTYNLLLNVCTLQNDVEAAENIFLE 240

Query: 241 MKKTKIEPDWVSFSTLANLYSKNQLTEKAASTLKEMEKIASMKNRISFSSLLSLYTNLGD 300
           MK  KIEPDWVSFSTLANLYSK QLTEKAASTLK+MEK+AS +NRISFSSLLSLYTN GD
Sbjct: 241 MKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLKKMEKMASKRNRISFSSLLSLYTNFGD 300

Query: 301 KDGVCRIWKKMKSSFRKMSDSEYSCMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNI 360
           KDGVCRIWKKM SSFRKM+DSEY+CMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNI
Sbjct: 301 KDGVCRIWKKMNSSFRKMNDSEYTCMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNI 360

Query: 361 LLAAYINKNQMEQAESFYDRMSVKGMAPSYTTWELLTYGYLKENQMKKVLHFFKNAVGSV 420
           LLAAYINKNQ +QAESFYDRM++KG+ PSYTTWELLT+GYLKENQM+KVL FFKNAVGSV
Sbjct: 361 LLAAYINKNQTKQAESFYDRMTLKGIVPSYTTWELLTWGYLKENQMEKVLQFFKNAVGSV 420

Query: 421 KKWNADEKLIKGVCKKLEEQGNIEGAEQLLIILRNADHVDTEMYNSLLRTYAKAGKMPLI 480
           KKWNADE+L++GVCK+LEEQGN EGAEQLLIILRNA HVDTE+YNSLLRTYAKAGKMPLI
Sbjct: 421 KKWNADERLVEGVCKRLEEQGNFEGAEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPLI 480

Query: 481 VAERMEMDNVQLNEETRELLKLT 499
           VAERME DNVQLNEE+RELLKLT
Sbjct: 481 VAERMEQDNVQLNEESRELLKLT 503

[Close]

BLAST of Sed0020529 vs. ExPASy Swiss-Prot
Match: Q9SY07 (Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g02820 PE=2 SV=1)

HSP 1 Score: 610.1 bits (1572), Expect = 2.3e-173
Identity = 311/525 (59.24%), Postives = 401/525 (76.38%), Query Frame = 0


Query: 1   MLRSLRPFLATAGRRYSGEASA-ADTVL------EGGSCTGGG---------GSRDTLGR 60
           ++RS RP LA+  R +S  A+A  DT          G   GG          G RDTLG 
Sbjct: 6   LVRSARPTLASIHRLFSAAAAATVDTATAPVVKPRSGGGKGGESANKKETVVGGRDTLGG 65

Query: 61  RLMSLAFPKRSAVIAIQKWKDEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKYI 120
           RL+SL + KRSAV+ I+KWK+EGH+VRKYELNRIVRELRK+KRYKHALEICEWM +Q+ I
Sbjct: 66  RLLSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQEDI 125

Query: 121 KLLPGDYAVHLDLISKIRGLNSAEKFFEDLPEKMRDQSACTALLHVYVQNNLSEKAKALM 180
           KL  GDYAVHLDLISKIRGLNSAEKFFED+P++MR  +ACT+LLH YVQN LS+KA+AL 
Sbjct: 126 KLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALF 185

Query: 181 EKMSECGFLKSPLSFNHMLSLHVSNKQLEKVPALVQELKKNTKPDVVTYNLLLKVCTLQN 240
           EKM ECGFLKS L +NHMLS+++S  Q EKVP L++ELK  T PD+VTYNL L      N
Sbjct: 186 EKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIRTSPDIVTYNLWLTAFASGN 245

Query: 241 DVEAAENIFLEMKKTKIEPDWVSFSTLANLYSKNQLTEKAASTLKEMEKIASMKNRISFS 300
           DVE AE ++L+ K+ K+ PDWV++S L NLY+K    EKA   LKEMEK+ S KNR++++
Sbjct: 246 DVEGAEKVYLKAKEEKLNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVSKKNRVAYA 305

Query: 301 SLLSLYTNLGDKDGVCRIWKKMKSSFRKMSDSEYSCMISSLVKLDKLEEAEKLYTEWESV 360
           SL+SL+ NLGDKDGV   WKK+KSSF+KM+D+EY  MIS++VKL + E+A+ LY EWESV
Sbjct: 306 SLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESV 365

Query: 361 SGTGDTRVPNILLAAYINKNQMEQAESFYDRMSVKGMAPSYTTWELLTYGYLKENQMKKV 420
           SGTGD R+PN++LA Y+N++++   E FY+R+  KG+ PSY+TWE+LT+ YLK   M+KV
Sbjct: 366 SGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDMEKV 425

Query: 421 LHFFKNAVGSVKKWNADEKLIKGVCKKLEEQGNIEGAEQLLIILRNADHVDTEMYNSLLR 480
           L  F  A+ SVKKW  + +L+KG CK+LEEQGN++GAE+L+ +L+ A +V+T++YNSLLR
Sbjct: 426 LDCFGKAIDSVKKWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYVNTQLYNSLLR 485

Query: 481 TYAKAGKMPLIVAERMEMDNVQLNEETRELLKLT---ELTELEKT 507
           TYAKAG+M LIV ERM  DNV+L+EET+EL++LT    +TE+  T
Sbjct: 486 TYAKAGEMALIVEERMAKDNVELDEETKELIRLTSQMRVTEISST 530

[Close]

BLAST of Sed0020529 vs. ExPASy Swiss-Prot
Match: Q8LPS6 (Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX=3702 GN=At1g02150 PE=2 SV=2)

HSP 1 Score: 273.5 bits (698), Expect = 5.0e-72
Identity = 150/425 (35.29%), Postives = 250/425 (58.82%), Query Frame = 0


Query: 44  RRLMSLAFPKRSAVIAIQKWKDEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQ-K 103
           +++  +  P+  A   + +W+  G  + K+EL R+V+ELRK KR   ALE+ +WM  + +
Sbjct: 71  KKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNRGE 130

Query: 104 YIKLLPGDYAVHLDLISKIRGLNSAEKFFEDLPEKMRDQSACTALLHVYVQNNLSEKAKA 163
             +L   D A+ LDLI K+RG+  AE+FF  LPE  +D+    +LL+ YV+    EKA+A
Sbjct: 131 RFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKAEA 190

Query: 164 LMEKMSECGFLKSPLSFNHMLSLHVSNKQLEKVPALVQELK-KNTKPDVVTYNLLLKVCT 223
           L+  M + G+   PL FN M++L+++ ++ +KV A+V E+K K+ + D+ +YN+ L  C 
Sbjct: 191 LLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCG 250

Query: 224 LQNDVEAAENIFLEMKK-TKIEPDWVSFSTLANLYSKNQLTEKAASTLKEMEKIASMKNR 283
               VE  E ++ +MK    I P+W +FST+A +Y K   TEKA   L+++E   + +NR
Sbjct: 251 SLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGRNR 310

Query: 284 ISFSSLLSLYTNLGDKDGVCRIWKKMKSSFRKMSDSEYSCMISSLVKLDKLEEAEKLYTE 343
           I +  LLSLY +LG+K  + R+W   KS    + +  Y  ++SSLV++  +E AEK+Y E
Sbjct: 311 IPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEE 370

Query: 344 WESVSGTGDTRVPNILLAAYINKNQMEQAESFYDRMSVKGMAPSYTTWELLTYGYLKENQ 403
           W  V  + D R+PN+L+ AY+  +Q+E AE  +D M   G  PS +TWE+L  G+ ++  
Sbjct: 371 WLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRKRC 430

Query: 404 MKKVLHFFKNAVGS--VKKWNADEKLIKGVCKKLEEQGNIEGAEQLLIILRNADHVDTEM 463
           + + L   +NA  +     W     ++ G  K  EE+ ++   E +L +LR +  ++ + 
Sbjct: 431 ISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSGDLEDKS 490

[Close]

BLAST of Sed0020529 vs. ExPASy Swiss-Prot
Match: Q3E911 (Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana OX=3702 GN=At5g27460 PE=2 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 5.2e-69
Identity = 169/487 (34.70%), Postives = 268/487 (55.03%), Query Frame = 0


Query: 9   LATAGRRY--SGEASAADTVLEGGSCTGGGGSRDTLGRRLMSLAFPKRSAVIAIQKWKDE 68
           +A A  R+  +G  S   + L  GS T    +R++L + ++    P+RS    +Q+  D 
Sbjct: 6   VAVAKTRFNTTGVVSRLVSSLADGSDTSSVANRNSL-KEILRKNGPRRSVTSLLQERIDS 65

Query: 69  GHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKYIKLLPGDYAVHLDLISKIRGLNS 128
           GH V   EL  I + L +  RY  AL++ EWM  QK I+    D A+ LDLI K  GL  
Sbjct: 66  GHAVSLSELRLISKRLIRSNRYDLALQMMEWMENQKDIEFSVYDIALRLDLIIKTHGLKQ 125

Query: 129 AEKFFEDL---PEKMR-DQSACTALLHVYVQNNLSEKAKALMEKMSECGFLKSPLSFNHM 188
            E++FE L      MR  +SA   LL  YV+N + ++A+ALMEK++  GFL +P  FN M
Sbjct: 126 GEEYFEKLLHSSVSMRVAKSAYLPLLRAYVKNKMVKEAEALMEKLNGLGFLVTPHPFNEM 185

Query: 189 LSLHVSNKQLEKVPALVQELKKNTKP-DVVTYNLLLKVCTLQNDVEAAENIFLEMKKTK- 248
           + L+ ++ Q EKV  +V  +K N  P +V++YNL +  C   + V A E ++ EM   K 
Sbjct: 186 MKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYNLWMNACCEVSGVAAVETVYKEMVGDKS 245

Query: 249 IEPDWVSFSTLANLYSKNQLTEKAASTLKEMEKIASMKNRISFSSLLSLYTNLGDKDGVC 308
           +E  W S  TLAN+Y K+   EKA   L++ EK+ +  NR+ +  L++LY +LG+K+GV 
Sbjct: 246 VEVGWSSLCTLANVYIKSGFDEKARLVLEDAEKMLNRSNRLGYFFLITLYASLGNKEGVV 305

Query: 309 RIWKKMKSSFRKMSDSEYSCMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNILLAAY 368
           R+W+  KS   ++S   Y C++SSLVK   LEEAE++++EWE+     D RV N+LL AY
Sbjct: 306 RLWEVSKSVCGRISCVNYICVLSSLVKTGDLEEAERVFSEWEAQCFNYDVRVSNVLLGAY 365

Query: 369 INKNQMEQAESFYDRMSVKGMAPSYTTWELLTYGYLKENQMKKVLHFFKNAVGSVKK--W 428
           +   ++ +AES +  +  +G  P+Y TWE+L  G++K   M+K +         +++  W
Sbjct: 366 VRNGEIRKAESLHGCVLERGGTPNYKTWEILMEGWVKCENMEKAIDAMHQVFVLMRRCHW 425

Query: 429 NADEKLIKGVCKKLEEQGNIEGAEQLLIILRNADHVDTEMYNSLLRTYAKAGKMPLIVAE 486
                ++  + +  E++  IE A   +  L         +Y  LLR +  A +    + E
Sbjct: 426 RPSHNIVMAIAEYFEKEEKIEEATAYVRDLHRLGLASLPLYRLLLRMHEHAKRPAYDIYE 485

[Close]

BLAST of Sed0020529 vs. ExPASy Swiss-Prot
Match: O22714 (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX=3702 GN=At1g60770 PE=1 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 3.1e-66
Identity = 144/433 (33.26%), Postives = 247/433 (57.04%), Query Frame = 0


Query: 70  VRKYELNRIVRELRKLKRYKHALEICEWMTLQKYIKLLPGDYAVHLDLISKIRGLNSAEK 129
           V K+E+   +++LR    Y  AL++ E M  ++ +     D A+HLDL++K R + + E 
Sbjct: 53  VFKWEVGDTIKKLRNRGLYYPALKLSEVME-ERGMNKTVSDQAIHLDLVAKAREITAGEN 112

Query: 130 FFEDLPEKMRDQSACTALLHVYVQNNLSEKAKALMEKMSECGFLKSPLSFNHMLSLHVSN 189
           +F DLPE  + +    +LL+ Y +  L+EKA+ L+ KM E     S +S+N +++L+   
Sbjct: 113 YFVDLPETSKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKT 172

Query: 190 KQLEKVPALVQELK-KNTKPDVVTYNLLLKVCTLQNDVEAAENIFLEMKKT-KIEPDWVS 249
            + EKVPA++QELK +N  PD  TYN+ ++     ND+   E +  EM +  ++ PDW +
Sbjct: 173 GETEKVPAMIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTT 232

Query: 250 FSTLANLYSKNQLTEKAASTLKEMEKIASMKNRISFSSLLSLYTNLGDKDGVCRIWKKMK 309
           +S +A++Y    L++KA   L+E+E   + ++  ++  L++LY  LG    V RIW+ ++
Sbjct: 233 YSNMASIYVDAGLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLR 292

Query: 310 SSFRKMSDSEYSCMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNILLAAYINKNQME 369
            +  K S+  Y  MI  LVKL+ L  AE L+ EW++   T D R+ N+L+ AY  +  ++
Sbjct: 293 LAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQ 352

Query: 370 QAESFYDRMSVKGMAPSYTTWELLTYGYLKENQMKKVLHFFKNAV----GSVKKWNADEK 429
           +A    ++   +G   +  TWE+    Y+K   M + L     AV    G   KW    +
Sbjct: 353 KANELKEKAPRRGGKLNAKTWEIFMDYYVKSGDMARALECMSKAVSIGKGDGGKWLPSPE 412

Query: 430 LIKGVCKKLEEQGNIEGAEQLLIILRN-ADHVDTEMYNSLLRTYAKAGKMPLIVAERMEM 489
            ++ +    E++ ++ GAE LL IL+N  D++  E++  L+RTYA AGK    +  R++M
Sbjct: 413 TVRALMSYFEQKKDVNGAENLLEILKNGTDNIGAEIFEPLIRTYAAAGKSHPAMRRRLKM 472

Query: 490 DNVQLNEETRELL 496
           +NV++NE T++LL
Sbjct: 473 ENVEVNEATKKLL 484

[Close]

BLAST of Sed0020529 vs. ExPASy Swiss-Prot
Match: Q84JR3 (Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g21705 PE=2 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 3.8e-64
Identity = 146/463 (31.53%), Postives = 253/463 (54.64%), Query Frame = 0


Query: 39  RDTLGRRLMSLAFPKRSAVIAIQKWKDEGHTVRKYELNRIVRELRKLKRYKHALEICEWM 98
           + TL  ++  L  PK S    +Q W   G  V   EL RIV +LR+ KR+ HALE+ +WM
Sbjct: 24  KTTLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRKRFLHALEVSKWM 83

Query: 99  TLQKYIKLLPGDYAVHLDLISKIRGLNSAEKFFEDLPEKMRDQSACTALLHVYVQNNLSE 158
                    P ++AVHLDLI ++ G  +AE++FE+L E+ ++     ALL+ YV+    E
Sbjct: 84  NETGVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGALLNCYVRQQNVE 143

Query: 159 KAKALMEKMSECGFLKSPLSFNHMLSLHVSNKQLEKVPALVQELK-KNTKPDVVTYNLLL 218
           K+    EKM E GF+ S L++N+++ L+ +  Q EKVP +++E+K +N  PD  +Y + +
Sbjct: 144 KSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPDNYSYRICI 203

Query: 219 KVCTLQNDVEAAENIFLEMKKTK-IEPDWVSFSTLANLYSKNQLTEKAASTLKEMEKIAS 278
                  D+E       +M++ + I  DW +++  A  Y      ++A   LK  E    
Sbjct: 204 NAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVELLKMSENRLE 263

Query: 279 MKNRISFSSLLSLYTNLGDKDGVCRIWKKMKSSFRKMSDSEYSCMISSLVKLDKLEEAEK 338
            K+   ++ L++LY  LG K  V R+W   K   ++  + +Y  ++ SLVK+D L EAE+
Sbjct: 264 KKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLVKIDALVEAEE 323

Query: 339 LYTEWESVSGTGDTRVPNILLAAYINKNQMEQAESFYDRMSVKGMAPSYTTWELLTYGYL 398
           + TEW+S     D RVPN ++  YI K+  E+AE+  + ++ +G A +  +WEL+   Y 
Sbjct: 324 VLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTPESWELVATAYA 383

Query: 399 KENQMKKVLHFFKNAVG---SVKKWNADEKLIKGVCKKLEEQGNIEGAEQLLIILRNADH 458
           ++  ++      K A+G     +KW     L+  V   + ++G+++  E  +  LRN   
Sbjct: 384 EKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKEVESFVASLRNCIG 443

Query: 459 VDTEMYNSLLRTYAKAGKMPL-IVAERMEMDNVQLNEETRELL 496
           V+ +MY++L++   + G   +  + +RM+ D ++++EET  +L
Sbjct: 444 VNKQMYHALVKADIREGGRNIDTLLQRMKDDKIEIDEETTVIL 486

[Close]

BLAST of Sed0020529 vs. ExPASy TrEMBL
Match: A0A6J1KUT7 (pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111497797 PE=4 SV=1)

HSP 1 Score: 851.3 bits (2198), Expect = 2.1e-243
Identity = 447/534 (83.71%), Postives = 482/534 (90.26%), Query Frame = 0


Query: 1   MLRSLRPFLATAGRRYSGEASAA---DTVLEGGSCTGG--GGSRDTLGRRLMSLAFPKRS 60
           M RS R +LATA RR+SGEA AA   +T LE  S + G  GG RDTLGRRLMSLAFPKRS
Sbjct: 1   MHRSSRLYLATAARRFSGEAYAAAVENTKLEAASGSSGTSGGGRDTLGRRLMSLAFPKRS 60

Query: 61  AVIAIQKWKDEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKYIKLLPGDYAVHL 120
           AVIAI+KW++EGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQK +KLLPGDYAVHL
Sbjct: 61  AVIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKNMKLLPGDYAVHL 120

Query: 121 DLISKIRGLNSAEKFFEDLPEKMRDQSACTALLHVYVQNNLSEKAKALMEKMSECGFLKS 180
           DLISKIRGL+SAEKFF DLP+KMR QSA T+LLHV+VQNNLSEKA+ALM KMSE GFLKS
Sbjct: 121 DLISKIRGLSSAEKFFMDLPDKMRGQSAYTSLLHVFVQNNLSEKAEALMAKMSEFGFLKS 180

Query: 181 PLSFNHMLSLHVSNKQLEKVPALVQELKKNTKPDVVTYNLLLKVCTLQNDVEAAENIFLE 240
           PLSFNHMLSLH++NK+LEKVPALVQELKKNTKPDVVTYNLLL VCTLQNDVEAAENIFLE
Sbjct: 181 PLSFNHMLSLHITNKRLEKVPALVQELKKNTKPDVVTYNLLLNVCTLQNDVEAAENIFLE 240

Query: 241 MKKTKIEPDWVSFSTLANLYSKNQLTEKAASTLKEMEKIASMKNRISFSSLLSLYTNLGD 300
           MK  KIEPDWVSFSTLANLYSK QLTEKAASTLK+MEK+AS +NRISFSSLLSLYTNLGD
Sbjct: 241 MKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLKKMEKMASKRNRISFSSLLSLYTNLGD 300

Query: 301 KDGVCRIWKKMKSSFRKMSDSEYSCMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNI 360
           KDGVCRIWKKM SSFRKM+DSEY CMISSLVKLDKLE+AEKLYTEWESVSGTGDTRVPNI
Sbjct: 301 KDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEDAEKLYTEWESVSGTGDTRVPNI 360

Query: 361 LLAAYINKNQMEQAESFYDRMSVKGMAPSYTTWELLTYGYLKENQMKKVLHFFKNAVGSV 420
           LLAAYINKNQM+QAESFYDRM++KG+ PSYTTWELLT+GYLKENQM+KVL FFKNAVGSV
Sbjct: 361 LLAAYINKNQMKQAESFYDRMTLKGIIPSYTTWELLTWGYLKENQMEKVLQFFKNAVGSV 420

Query: 421 KKWNADEKLIKGVCKKLEEQGNIEGAEQLLIILRNADHVDTEMYNSLLRTYAKAGKMPLI 480
           KKWNADE+L+KGVCK+LEEQGN EG EQLLIILRNA HVDTE+YNSLLRTYAKAGKMPLI
Sbjct: 421 KKWNADERLVKGVCKRLEEQGNFEGTEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPLI 480

Query: 481 VAERMEMDNVQLNEETRELLKLTE-----------LTELEKTNETNRTNSIPSV 519
           VAERME DNVQLNEE+RELLKLT              E +KTNET++TNS  SV
Sbjct: 481 VAERMEQDNVQLNEESRELLKLTTKMCVSEVSSTFYHEAQKTNETDQTNSTQSV 534

[Close]

BLAST of Sed0020529 vs. ExPASy TrEMBL
Match: A0A6J1H967 (pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111461204 PE=4 SV=1)

HSP 1 Score: 849.4 bits (2193), Expect = 8.1e-243
Identity = 446/534 (83.52%), Postives = 480/534 (89.89%), Query Frame = 0


Query: 1   MLRSLRPFLATAGRRYSGEASAA---DTVLE--GGSCTGGGGSRDTLGRRLMSLAFPKRS 60
           MLRS R +LATA RR+SGEA A    +T LE   GS   GGG RDTLGRRLMSLAFPKRS
Sbjct: 1   MLRSPRLYLATAARRFSGEACAVAVENTTLEAASGSSGTGGGGRDTLGRRLMSLAFPKRS 60

Query: 61  AVIAIQKWKDEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKYIKLLPGDYAVHL 120
           AVIAI+KW++EGHTVRKY+LNRIVRELRKLKRYKHALEICEWMTLQK +KLLPGDYAVHL
Sbjct: 61  AVIAIRKWQEEGHTVRKYDLNRIVRELRKLKRYKHALEICEWMTLQKDMKLLPGDYAVHL 120

Query: 121 DLISKIRGLNSAEKFFEDLPEKMRDQSACTALLHVYVQNNLSEKAKALMEKMSECGFLKS 180
           DLISKIRGL+SAEKFF DLP+KMR QSA T+LLHV+VQNNLSEKA+ALM KMSE GFLKS
Sbjct: 121 DLISKIRGLSSAEKFFMDLPDKMRGQSAYTSLLHVFVQNNLSEKAEALMAKMSEFGFLKS 180

Query: 181 PLSFNHMLSLHVSNKQLEKVPALVQELKKNTKPDVVTYNLLLKVCTLQNDVEAAENIFLE 240
           PLSFNHMLSLH++NK+LEKVPALVQELKKNTKPDVVTYNLLL VCTLQNDVEAAENIFLE
Sbjct: 181 PLSFNHMLSLHITNKRLEKVPALVQELKKNTKPDVVTYNLLLNVCTLQNDVEAAENIFLE 240

Query: 241 MKKTKIEPDWVSFSTLANLYSKNQLTEKAASTLKEMEKIASMKNRISFSSLLSLYTNLGD 300
           MK  KIEPDWVSFSTLANLYSK QLTEKAASTLK+MEK+AS +NRISFSSLLSLYTNLGD
Sbjct: 241 MKNAKIEPDWVSFSTLANLYSKQQLTEKAASTLKKMEKMASKRNRISFSSLLSLYTNLGD 300

Query: 301 KDGVCRIWKKMKSSFRKMSDSEYSCMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNI 360
           KDGVCRIWKKM SSFRKM+DSEY CMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNI
Sbjct: 301 KDGVCRIWKKMNSSFRKMNDSEYMCMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNI 360

Query: 361 LLAAYINKNQMEQAESFYDRMSVKGMAPSYTTWELLTYGYLKENQMKKVLHFFKNAVGSV 420
           LLAAYINKNQ +QAESFYDRM++KG+ PSYTTWELLT+GYLKENQM+KVL FFKNAVGSV
Sbjct: 361 LLAAYINKNQTKQAESFYDRMTLKGIIPSYTTWELLTWGYLKENQMEKVLQFFKNAVGSV 420

Query: 421 KKWNADEKLIKGVCKKLEEQGNIEGAEQLLIILRNADHVDTEMYNSLLRTYAKAGKMPLI 480
           KKWN DE+L+KGVCK+LEEQGN EGAEQLLIILRNA HVDTE+YNSLLRTYAKAGKMPLI
Sbjct: 421 KKWNVDERLVKGVCKRLEEQGNFEGAEQLLIILRNAGHVDTEIYNSLLRTYAKAGKMPLI 480

Query: 481 VAERMEMDNVQLNEETRELLKLTE-----------LTELEKTNETNRTNSIPSV 519
           VAERME DNVQLNEE+RELLKLT              E +KTN+T+ TNS  SV
Sbjct: 481 VAERMEQDNVQLNEESRELLKLTSKMCVSEVSSTFYHEAQKTNKTDGTNSTQSV 534

[Close]

BLAST of Sed0020529 vs. ExPASy TrEMBL
Match: A0A6J1DB09 (pentatricopeptide repeat-containing protein At4g02820, mitochondrial isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018472 PE=4 SV=1)

HSP 1 Score: 837.4 bits (2162), Expect = 3.2e-239
Identity = 434/522 (83.14%), Postives = 480/522 (91.95%), Query Frame = 0


Query: 1   MLRSLRPFLATAGRRYSGEASAA---DTVLEGGS-CTGGGGSRDTLGRRLMSLAFPKRSA 60
           MLRSLR  LATA RR+SGEA  A   +T +EGGS  +GGGG RDTLGRRLMSLAFPKRSA
Sbjct: 1   MLRSLRTSLATAARRFSGEAFMAAVENTAIEGGSGSSGGGGGRDTLGRRLMSLAFPKRSA 60

Query: 61  VIAIQKWKDEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKYIKLLPGDYAVHLD 120
           VIAI+KW++EGHTVRKYELNRIVRELRKLKRYKHALEICEW T QK +KLLPGDYAVHLD
Sbjct: 61  VIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEICEWTTSQKDMKLLPGDYAVHLD 120

Query: 121 LISKIRGLNSAEKFFEDLPEKMRDQSACTALLHVYVQNNLSEKAKALMEKMSECGFLKSP 180
           LI+KIRGLNSAEKFFEDLP+KMR QSACTALLHVYVQNNLS+KA+ALMEKMSECGFLKSP
Sbjct: 121 LIAKIRGLNSAEKFFEDLPDKMRGQSACTALLHVYVQNNLSDKAEALMEKMSECGFLKSP 180

Query: 181 LSFNHMLSLHVSNKQLEKVPALVQELKKNTKPDVVTYNLLLKVCTLQNDVEAAENIFLEM 240
           LSFNHMLSLH+SNKQL+KVPAL+Q+L+KNTKPDVVTYNLLL VCTLQNDVEAAENI LEM
Sbjct: 181 LSFNHMLSLHISNKQLDKVPALIQDLQKNTKPDVVTYNLLLNVCTLQNDVEAAENILLEM 240

Query: 241 KKTKIEPDWVSFSTLANLYSKNQLTEKAASTLKEMEKIASMKNRISFSSLLSLYTNLGDK 300
           KK KIE DWV+ STL NLYSK QLTEKAASTLKEMEK+AS +NRI+FSSLLSLYTNLGDK
Sbjct: 241 KKMKIERDWVTLSTLTNLYSKKQLTEKAASTLKEMEKMASKRNRITFSSLLSLYTNLGDK 300

Query: 301 DGVCRIWKKMKSSFRKMSDSEYSCMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNIL 360
           DG  RIWKKMK+SFRKMSDSEY+CMISS+VKL +LEEAEKLYTEWESVSGTGDTRVPNIL
Sbjct: 301 DGAWRIWKKMKTSFRKMSDSEYTCMISSVVKLHELEEAEKLYTEWESVSGTGDTRVPNIL 360

Query: 361 LAAYINKNQMEQAESFYDRMSVKGMAPSYTTWELLTYGYLKENQMKKVLHFFKNAVGSVK 420
           LAAYIN NQMEQAESFY+RMS+KG+ PSYTTWELLT+GYLKENQM+KVLHFFKNAVGSVK
Sbjct: 361 LAAYINNNQMEQAESFYNRMSLKGIVPSYTTWELLTWGYLKENQMEKVLHFFKNAVGSVK 420

Query: 421 KWNADEKLIKGVCKKLEEQGNIEGAEQLLIILRNADHVDTEMYNSLLRTYAKAGKMPLIV 480
           KWNADE+L+K VCKKLEE+GNIEGAE+LLI+LRNA HV+TE+YNSLLRTYAKAGKMPLIV
Sbjct: 421 KWNADERLVKQVCKKLEEEGNIEGAEKLLIVLRNAGHVNTEIYNSLLRTYAKAGKMPLIV 480

Query: 481 AERMEMDNVQLNEETRELLKLTE---LTELEKT--NETNRTN 514
           AERME D+V+L+EETREL+KLT    ++E+  T   ET +T+
Sbjct: 481 AERMEKDDVKLDEETRELIKLTSKMCVSEVSSTFYYETRKTD 522

[Close]

BLAST of Sed0020529 vs. ExPASy TrEMBL
Match: A0A5D3D4M6 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2032G00090 PE=4 SV=1)

HSP 1 Score: 829.7 bits (2142), Expect = 6.7e-237
Identity = 428/531 (80.60%), Postives = 481/531 (90.58%), Query Frame = 0


Query: 1   MLRSLRPFLAT-AGRRYSGE---ASAADTVLEGGSCTG----GGGSRDTLGRRLMSLAFP 60
           M RS R  LAT A RR+SGE   A+A +T +EGG+ TG     GG RDTLGRRLMSL FP
Sbjct: 1   MFRSFRSSLATAAARRFSGEACVAAAENTSVEGGAGTGVVSRKGGGRDTLGRRLMSLTFP 60

Query: 61  KRSAVIAIQKWKDEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKYIKLLPGDYA 120
           KRSAVIAI+KW++EGHT+RKYELN IVRELRKLKRYKHALE+CEWMTLQK +KLLPGDYA
Sbjct: 61  KRSAVIAIRKWQEEGHTIRKYELNHIVRELRKLKRYKHALEVCEWMTLQKDMKLLPGDYA 120

Query: 121 VHLDLISKIRGLNSAEKFFEDLPEKMRDQSACTALLHVYVQNNLSEKAKALMEKMSECGF 180
           V LDLI+KIRGLNSAEKFFEDLP+K+R+QS CTALLH YVQ NLSEKA+ALMEKMSECGF
Sbjct: 121 VQLDLIAKIRGLNSAEKFFEDLPDKIREQSVCTALLHAYVQKNLSEKAEALMEKMSECGF 180

Query: 181 LKSPLSFNHMLSLHVSNKQLEKVPALVQELKKNTKPDVVTYNLLLKVCTLQNDVEAAENI 240
           LKSPLSFNHMLSLH+SNKQLEKVPAL++ LKKNTKPDVVTYNLLL VCTLQND EAAENI
Sbjct: 181 LKSPLSFNHMLSLHISNKQLEKVPALIEVLKKNTKPDVVTYNLLLNVCTLQNDAEAAENI 240

Query: 241 FLEMKKTKIEPDWVSFSTLANLYSKNQLTEKAASTLKEMEKIASMKNRISFSSLLSLYTN 300
           FLEMKKTK++PDW+SFSTLANLY K QLTEKAA+TLKEMEK+A  +NR+SFSSLLSLYTN
Sbjct: 241 FLEMKKTKVQPDWLSFSTLANLYCKKQLTEKAAATLKEMEKMAFKRNRLSFSSLLSLYTN 300

Query: 301 LGDKDGVCRIWKKMKSSFRKMSDSEYSCMISSLVKLDKLEEAEKLYTEWESVSGTGDTRV 360
           LGDK+ V RIWKK+KSSFRKMSDSEY CM+SSLVKL++LEEAEKLYTEWESVSGT DTR+
Sbjct: 301 LGDKNEVRRIWKKLKSSFRKMSDSEYMCMVSSLVKLNELEEAEKLYTEWESVSGTRDTRI 360

Query: 361 PNILLAAYINKNQMEQAESFYDRMSVKGMAPSYTTWELLTYGYLKENQMKKVLHFFKNAV 420
            N++LAAYINKNQMEQAESFY+RMS+KG+ PSYTTWELLT+GYLKENQM+KVLHFFKNAV
Sbjct: 361 SNVMLAAYINKNQMEQAESFYNRMSLKGIVPSYTTWELLTWGYLKENQMEKVLHFFKNAV 420

Query: 421 GSVKKWNADEKLIKGVCKKLEEQGNIEGAEQLLIILRNADHVDTEMYNSLLRTYAKAGKM 480
           GSVKKWNADE+L+KGVCKKLEEQGNIEG EQLL+ILRNA HVDTE+YNSLLRTYAKAGKM
Sbjct: 421 GSVKKWNADERLVKGVCKKLEEQGNIEGVEQLLVILRNAGHVDTEIYNSLLRTYAKAGKM 480

Query: 481 PLIVAERMEMDNVQLNEETRELLKLTE---LTELEKT--NETNRTNSIPSV 519
           PLIVAERME DNVQLN+ETRELL+LT    ++E+  T  ++T++TNS+ SV
Sbjct: 481 PLIVAERMEKDNVQLNDETRELLRLTSKMCVSEVSSTLYDKTDQTNSVQSV 531

[Close]

BLAST of Sed0020529 vs. ExPASy TrEMBL
Match: A0A6J1D809 (pentatricopeptide repeat-containing protein At4g02820, mitochondrial isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018472 PE=4 SV=1)

HSP 1 Score: 825.1 bits (2130), Expect = 1.6e-235
Identity = 434/543 (79.93%), Postives = 480/543 (88.40%), Query Frame = 0


Query: 1   MLRSLRPFLATAGRRYSGEASAA---DTVLEGGS-CTGGGGSRDTLGRRLMSLAFPKRSA 60
           MLRSLR  LATA RR+SGEA  A   +T +EGGS  +GGGG RDTLGRRLMSLAFPKRSA
Sbjct: 1   MLRSLRTSLATAARRFSGEAFMAAVENTAIEGGSGSSGGGGGRDTLGRRLMSLAFPKRSA 60

Query: 61  VIAIQKWKDEGHTVRKYELNRIVRELRKLKRYKHALE---------------------IC 120
           VIAI+KW++EGHTVRKYELNRIVRELRKLKRYKHALE                     IC
Sbjct: 61  VIAIRKWQEEGHTVRKYELNRIVRELRKLKRYKHALEDYLVARPHNDPTSRKLQRNKYIC 120

Query: 121 EWMTLQKYIKLLPGDYAVHLDLISKIRGLNSAEKFFEDLPEKMRDQSACTALLHVYVQNN 180
           EW T QK +KLLPGDYAVHLDLI+KIRGLNSAEKFFEDLP+KMR QSACTALLHVYVQNN
Sbjct: 121 EWTTSQKDMKLLPGDYAVHLDLIAKIRGLNSAEKFFEDLPDKMRGQSACTALLHVYVQNN 180

Query: 181 LSEKAKALMEKMSECGFLKSPLSFNHMLSLHVSNKQLEKVPALVQELKKNTKPDVVTYNL 240
           LS+KA+ALMEKMSECGFLKSPLSFNHMLSLH+SNKQL+KVPAL+Q+L+KNTKPDVVTYNL
Sbjct: 181 LSDKAEALMEKMSECGFLKSPLSFNHMLSLHISNKQLDKVPALIQDLQKNTKPDVVTYNL 240

Query: 241 LLKVCTLQNDVEAAENIFLEMKKTKIEPDWVSFSTLANLYSKNQLTEKAASTLKEMEKIA 300
           LL VCTLQNDVEAAENI LEMKK KIE DWV+ STL NLYSK QLTEKAASTLKEMEK+A
Sbjct: 241 LLNVCTLQNDVEAAENILLEMKKMKIERDWVTLSTLTNLYSKKQLTEKAASTLKEMEKMA 300

Query: 301 SMKNRISFSSLLSLYTNLGDKDGVCRIWKKMKSSFRKMSDSEYSCMISSLVKLDKLEEAE 360
           S +NRI+FSSLLSLYTNLGDKDG  RIWKKMK+SFRKMSDSEY+CMISS+VKL +LEEAE
Sbjct: 301 SKRNRITFSSLLSLYTNLGDKDGAWRIWKKMKTSFRKMSDSEYTCMISSVVKLHELEEAE 360

Query: 361 KLYTEWESVSGTGDTRVPNILLAAYINKNQMEQAESFYDRMSVKGMAPSYTTWELLTYGY 420
           KLYTEWESVSGTGDTRVPNILLAAYIN NQMEQAESFY+RMS+KG+ PSYTTWELLT+GY
Sbjct: 361 KLYTEWESVSGTGDTRVPNILLAAYINNNQMEQAESFYNRMSLKGIVPSYTTWELLTWGY 420

Query: 421 LKENQMKKVLHFFKNAVGSVKKWNADEKLIKGVCKKLEEQGNIEGAEQLLIILRNADHVD 480
           LKENQM+KVLHFFKNAVGSVKKWNADE+L+K VCKKLEE+GNIEGAE+LLI+LRNA HV+
Sbjct: 421 LKENQMEKVLHFFKNAVGSVKKWNADERLVKQVCKKLEEEGNIEGAEKLLIVLRNAGHVN 480

Query: 481 TEMYNSLLRTYAKAGKMPLIVAERMEMDNVQLNEETRELLKLTE---LTELEKT--NETN 514
           TE+YNSLLRTYAKAGKMPLIVAERME D+V+L+EETREL+KLT    ++E+  T   ET 
Sbjct: 481 TEIYNSLLRTYAKAGKMPLIVAERMEKDDVKLDEETRELIKLTSKMCVSEVSSTFYYETR 540

[Close]

BLAST of Sed0020529 vs. TAIR 10
Match: AT4G02820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 610.1 bits (1572), Expect = 1.6e-174
Identity = 311/525 (59.24%), Postives = 401/525 (76.38%), Query Frame = 0


Query: 1   MLRSLRPFLATAGRRYSGEASA-ADTVL------EGGSCTGGG---------GSRDTLGR 60
           ++RS RP LA+  R +S  A+A  DT          G   GG          G RDTLG 
Sbjct: 6   LVRSARPTLASIHRLFSAAAAATVDTATAPVVKPRSGGGKGGESANKKETVVGGRDTLGG 65

Query: 61  RLMSLAFPKRSAVIAIQKWKDEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKYI 120
           RL+SL + KRSAV+ I+KWK+EGH+VRKYELNRIVRELRK+KRYKHALEICEWM +Q+ I
Sbjct: 66  RLLSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQEDI 125

Query: 121 KLLPGDYAVHLDLISKIRGLNSAEKFFEDLPEKMRDQSACTALLHVYVQNNLSEKAKALM 180
           KL  GDYAVHLDLISKIRGLNSAEKFFED+P++MR  +ACT+LLH YVQN LS+KA+AL 
Sbjct: 126 KLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALF 185

Query: 181 EKMSECGFLKSPLSFNHMLSLHVSNKQLEKVPALVQELKKNTKPDVVTYNLLLKVCTLQN 240
           EKM ECGFLKS L +NHMLS+++S  Q EKVP L++ELK  T PD+VTYNL L      N
Sbjct: 186 EKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIRTSPDIVTYNLWLTAFASGN 245

Query: 241 DVEAAENIFLEMKKTKIEPDWVSFSTLANLYSKNQLTEKAASTLKEMEKIASMKNRISFS 300
           DVE AE ++L+ K+ K+ PDWV++S L NLY+K    EKA   LKEMEK+ S KNR++++
Sbjct: 246 DVEGAEKVYLKAKEEKLNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVSKKNRVAYA 305

Query: 301 SLLSLYTNLGDKDGVCRIWKKMKSSFRKMSDSEYSCMISSLVKLDKLEEAEKLYTEWESV 360
           SL+SL+ NLGDKDGV   WKK+KSSF+KM+D+EY  MIS++VKL + E+A+ LY EWESV
Sbjct: 306 SLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESV 365

Query: 361 SGTGDTRVPNILLAAYINKNQMEQAESFYDRMSVKGMAPSYTTWELLTYGYLKENQMKKV 420
           SGTGD R+PN++LA Y+N++++   E FY+R+  KG+ PSY+TWE+LT+ YLK   M+KV
Sbjct: 366 SGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDMEKV 425

Query: 421 LHFFKNAVGSVKKWNADEKLIKGVCKKLEEQGNIEGAEQLLIILRNADHVDTEMYNSLLR 480
           L  F  A+ SVKKW  + +L+KG CK+LEEQGN++GAE+L+ +L+ A +V+T++YNSLLR
Sbjct: 426 LDCFGKAIDSVKKWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYVNTQLYNSLLR 485

Query: 481 TYAKAGKMPLIVAERMEMDNVQLNEETRELLKLT---ELTELEKT 507
           TYAKAG+M LIV ERM  DNV+L+EET+EL++LT    +TE+  T
Sbjct: 486 TYAKAGEMALIVEERMAKDNVELDEETKELIRLTSQMRVTEISST 530

[Close]

BLAST of Sed0020529 vs. TAIR 10
Match: AT1G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 273.5 bits (698), Expect = 3.6e-73
Identity = 150/425 (35.29%), Postives = 250/425 (58.82%), Query Frame = 0


Query: 44  RRLMSLAFPKRSAVIAIQKWKDEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQ-K 103
           +++  +  P+  A   + +W+  G  + K+EL R+V+ELRK KR   ALE+ +WM  + +
Sbjct: 71  KKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNRGE 130

Query: 104 YIKLLPGDYAVHLDLISKIRGLNSAEKFFEDLPEKMRDQSACTALLHVYVQNNLSEKAKA 163
             +L   D A+ LDLI K+RG+  AE+FF  LPE  +D+    +LL+ YV+    EKA+A
Sbjct: 131 RFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKAEA 190

Query: 164 LMEKMSECGFLKSPLSFNHMLSLHVSNKQLEKVPALVQELK-KNTKPDVVTYNLLLKVCT 223
           L+  M + G+   PL FN M++L+++ ++ +KV A+V E+K K+ + D+ +YN+ L  C 
Sbjct: 191 LLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCG 250

Query: 224 LQNDVEAAENIFLEMKK-TKIEPDWVSFSTLANLYSKNQLTEKAASTLKEMEKIASMKNR 283
               VE  E ++ +MK    I P+W +FST+A +Y K   TEKA   L+++E   + +NR
Sbjct: 251 SLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGRNR 310

Query: 284 ISFSSLLSLYTNLGDKDGVCRIWKKMKSSFRKMSDSEYSCMISSLVKLDKLEEAEKLYTE 343
           I +  LLSLY +LG+K  + R+W   KS    + +  Y  ++SSLV++  +E AEK+Y E
Sbjct: 311 IPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEE 370

Query: 344 WESVSGTGDTRVPNILLAAYINKNQMEQAESFYDRMSVKGMAPSYTTWELLTYGYLKENQ 403
           W  V  + D R+PN+L+ AY+  +Q+E AE  +D M   G  PS +TWE+L  G+ ++  
Sbjct: 371 WLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRKRC 430

Query: 404 MKKVLHFFKNAVGS--VKKWNADEKLIKGVCKKLEEQGNIEGAEQLLIILRNADHVDTEM 463
           + + L   +NA  +     W     ++ G  K  EE+ ++   E +L +LR +  ++ + 
Sbjct: 431 ISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSGDLEDKS 490

[Close]

BLAST of Sed0020529 vs. TAIR 10
Match: AT5G27460.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 263.5 bits (672), Expect = 3.7e-70
Identity = 169/487 (34.70%), Postives = 268/487 (55.03%), Query Frame = 0


Query: 9   LATAGRRY--SGEASAADTVLEGGSCTGGGGSRDTLGRRLMSLAFPKRSAVIAIQKWKDE 68
           +A A  R+  +G  S   + L  GS T    +R++L + ++    P+RS    +Q+  D 
Sbjct: 6   VAVAKTRFNTTGVVSRLVSSLADGSDTSSVANRNSL-KEILRKNGPRRSVTSLLQERIDS 65

Query: 69  GHTVRKYELNRIVRELRKLKRYKHALEICEWMTLQKYIKLLPGDYAVHLDLISKIRGLNS 128
           GH V   EL  I + L +  RY  AL++ EWM  QK I+    D A+ LDLI K  GL  
Sbjct: 66  GHAVSLSELRLISKRLIRSNRYDLALQMMEWMENQKDIEFSVYDIALRLDLIIKTHGLKQ 125

Query: 129 AEKFFEDL---PEKMR-DQSACTALLHVYVQNNLSEKAKALMEKMSECGFLKSPLSFNHM 188
            E++FE L      MR  +SA   LL  YV+N + ++A+ALMEK++  GFL +P  FN M
Sbjct: 126 GEEYFEKLLHSSVSMRVAKSAYLPLLRAYVKNKMVKEAEALMEKLNGLGFLVTPHPFNEM 185

Query: 189 LSLHVSNKQLEKVPALVQELKKNTKP-DVVTYNLLLKVCTLQNDVEAAENIFLEMKKTK- 248
           + L+ ++ Q EKV  +V  +K N  P +V++YNL +  C   + V A E ++ EM   K 
Sbjct: 186 MKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYNLWMNACCEVSGVAAVETVYKEMVGDKS 245

Query: 249 IEPDWVSFSTLANLYSKNQLTEKAASTLKEMEKIASMKNRISFSSLLSLYTNLGDKDGVC 308
           +E  W S  TLAN+Y K+   EKA   L++ EK+ +  NR+ +  L++LY +LG+K+GV 
Sbjct: 246 VEVGWSSLCTLANVYIKSGFDEKARLVLEDAEKMLNRSNRLGYFFLITLYASLGNKEGVV 305

Query: 309 RIWKKMKSSFRKMSDSEYSCMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNILLAAY 368
           R+W+  KS   ++S   Y C++SSLVK   LEEAE++++EWE+     D RV N+LL AY
Sbjct: 306 RLWEVSKSVCGRISCVNYICVLSSLVKTGDLEEAERVFSEWEAQCFNYDVRVSNVLLGAY 365

Query: 369 INKNQMEQAESFYDRMSVKGMAPSYTTWELLTYGYLKENQMKKVLHFFKNAVGSVKK--W 428
           +   ++ +AES +  +  +G  P+Y TWE+L  G++K   M+K +         +++  W
Sbjct: 366 VRNGEIRKAESLHGCVLERGGTPNYKTWEILMEGWVKCENMEKAIDAMHQVFVLMRRCHW 425

Query: 429 NADEKLIKGVCKKLEEQGNIEGAEQLLIILRNADHVDTEMYNSLLRTYAKAGKMPLIVAE 486
                ++  + +  E++  IE A   +  L         +Y  LLR +  A +    + E
Sbjct: 426 RPSHNIVMAIAEYFEKEEKIEEATAYVRDLHRLGLASLPLYRLLLRMHEHAKRPAYDIYE 485

[Close]

BLAST of Sed0020529 vs. TAIR 10
Match: AT1G60770.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 254.2 bits (648), Expect = 2.2e-67
Identity = 144/433 (33.26%), Postives = 247/433 (57.04%), Query Frame = 0


Query: 70  VRKYELNRIVRELRKLKRYKHALEICEWMTLQKYIKLLPGDYAVHLDLISKIRGLNSAEK 129
           V K+E+   +++LR    Y  AL++ E M  ++ +     D A+HLDL++K R + + E 
Sbjct: 53  VFKWEVGDTIKKLRNRGLYYPALKLSEVME-ERGMNKTVSDQAIHLDLVAKAREITAGEN 112

Query: 130 FFEDLPEKMRDQSACTALLHVYVQNNLSEKAKALMEKMSECGFLKSPLSFNHMLSLHVSN 189
           +F DLPE  + +    +LL+ Y +  L+EKA+ L+ KM E     S +S+N +++L+   
Sbjct: 113 YFVDLPETSKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKT 172

Query: 190 KQLEKVPALVQELK-KNTKPDVVTYNLLLKVCTLQNDVEAAENIFLEMKKT-KIEPDWVS 249
            + EKVPA++QELK +N  PD  TYN+ ++     ND+   E +  EM +  ++ PDW +
Sbjct: 173 GETEKVPAMIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTT 232

Query: 250 FSTLANLYSKNQLTEKAASTLKEMEKIASMKNRISFSSLLSLYTNLGDKDGVCRIWKKMK 309
           +S +A++Y    L++KA   L+E+E   + ++  ++  L++LY  LG    V RIW+ ++
Sbjct: 233 YSNMASIYVDAGLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLR 292

Query: 310 SSFRKMSDSEYSCMISSLVKLDKLEEAEKLYTEWESVSGTGDTRVPNILLAAYINKNQME 369
            +  K S+  Y  MI  LVKL+ L  AE L+ EW++   T D R+ N+L+ AY  +  ++
Sbjct: 293 LAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQ 352

Query: 370 QAESFYDRMSVKGMAPSYTTWELLTYGYLKENQMKKVLHFFKNAV----GSVKKWNADEK 429
           +A    ++   +G   +  TWE+    Y+K   M + L     AV    G   KW    +
Sbjct: 353 KANELKEKAPRRGGKLNAKTWEIFMDYYVKSGDMARALECMSKAVSIGKGDGGKWLPSPE 412

Query: 430 LIKGVCKKLEEQGNIEGAEQLLIILRN-ADHVDTEMYNSLLRTYAKAGKMPLIVAERMEM 489
            ++ +    E++ ++ GAE LL IL+N  D++  E++  L+RTYA AGK    +  R++M
Sbjct: 413 TVRALMSYFEQKKDVNGAENLLEILKNGTDNIGAEIFEPLIRTYAAAGKSHPAMRRRLKM 472

Query: 490 DNVQLNEETRELL 496
           +NV++NE T++LL
Sbjct: 473 ENVEVNEATKKLL 484

[Close]

BLAST of Sed0020529 vs. TAIR 10
Match: AT4G21705.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 247.3 bits (630), Expect = 2.7e-65
Identity = 146/463 (31.53%), Postives = 253/463 (54.64%), Query Frame = 0


Query: 39  RDTLGRRLMSLAFPKRSAVIAIQKWKDEGHTVRKYELNRIVRELRKLKRYKHALEICEWM 98
           + TL  ++  L  PK S    +Q W   G  V   EL RIV +LR+ KR+ HALE+ +WM
Sbjct: 24  KTTLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRKRFLHALEVSKWM 83

Query: 99  TLQKYIKLLPGDYAVHLDLISKIRGLNSAEKFFEDLPEKMRDQSACTALLHVYVQNNLSE 158
                    P ++AVHLDLI ++ G  +AE++FE+L E+ ++     ALL+ YV+    E
Sbjct: 84  NETGVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGALLNCYVRQQNVE 143

Query: 159 KAKALMEKMSECGFLKSPLSFNHMLSLHVSNKQLEKVPALVQELK-KNTKPDVVTYNLLL 218
           K+    EKM E GF+ S L++N+++ L+ +  Q EKVP +++E+K +N  PD  +Y + +
Sbjct: 144 KSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPDNYSYRICI 203

Query: 219 KVCTLQNDVEAAENIFLEMKKTK-IEPDWVSFSTLANLYSKNQLTEKAASTLKEMEKIAS 278
                  D+E       +M++ + I  DW +++  A  Y      ++A   LK  E    
Sbjct: 204 NAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVELLKMSENRLE 263

Query: 279 MKNRISFSSLLSLYTNLGDKDGVCRIWKKMKSSFRKMSDSEYSCMISSLVKLDKLEEAEK 338
            K+   ++ L++LY  LG K  V R+W   K   ++  + +Y  ++ SLVK+D L EAE+
Sbjct: 264 KKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLVKIDALVEAEE 323

Query: 339 LYTEWESVSGTGDTRVPNILLAAYINKNQMEQAESFYDRMSVKGMAPSYTTWELLTYGYL 398
           + TEW+S     D RVPN ++  YI K+  E+AE+  + ++ +G A +  +WEL+   Y 
Sbjct: 324 VLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTPESWELVATAYA 383

Query: 399 KENQMKKVLHFFKNAVG---SVKKWNADEKLIKGVCKKLEEQGNIEGAEQLLIILRNADH 458
           ++  ++      K A+G     +KW     L+  V   + ++G+++  E  +  LRN   
Sbjct: 384 EKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKEVESFVASLRNCIG 443

Query: 459 VDTEMYNSLLRTYAKAGKMPL-IVAERMEMDNVQLNEETRELL 496
           V+ +MY++L++   + G   +  + +RM+ D ++++EET  +L
Sbjct: 444 VNKQMYHALVKADIREGGRNIDTLLQRMKDDKIEIDEETTVIL 486

The following BLAST results are available for this feature:

BLAST of Sed0020529 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023004520.1	4.4e-243	83.71	pentatricopeptide repeat-containing protein At4g02820, mitochondrial [Cucurbita ...	[more]
KAG7027261.1	5.8e-243	83.71	Pentatricopeptide repeat-containing protein, mitochondrial [Cucurbita argyrosper...	[more]
XP_022960480.1	1.7e-242	83.52	pentatricopeptide repeat-containing protein At4g02820, mitochondrial [Cucurbita ...	[more]
XP_023515289.1	4.1e-241	84.41	pentatricopeptide repeat-containing protein At4g02820, mitochondrial isoform X1 ...	[more]
KAG6593129.1	1.3e-239	86.28	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]

BLAST of Sed0020529 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SY07	2.3e-173	59.24	Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidop...	[more]
Q8LPS6	5.0e-72	35.29	Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX...	[more]
Q3E911	5.2e-69	34.70	Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana OX...	[more]
O22714	3.1e-66	33.26	Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX...	[more]
Q84JR3	3.8e-64	31.53	Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidop...	[more]

BLAST of Sed0020529 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KUT7	2.1e-243	83.71	pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Cucurbit...	[more]
A0A6J1H967	8.1e-243	83.52	pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Cucurbit...	[more]
A0A6J1DB09	3.2e-239	83.14	pentatricopeptide repeat-containing protein At4g02820, mitochondrial isoform X2 ...	[more]
A0A5D3D4M6	6.7e-237	80.60	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1D809	1.6e-235	79.93	pentatricopeptide repeat-containing protein At4g02820, mitochondrial isoform X1 ...	[more]

BLAST of Sed0020529 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02820.1	1.6e-174	59.24	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G02150.1	3.6e-73	35.29	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G27460.1	3.7e-70	34.70	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G60770.1	2.2e-67	33.26	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G21705.1	2.7e-65	31.53	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 477..497
None	No IPR available	PANTHER	PTHR45717	OS12G0527900 PROTEIN	coord: 41..498
None	No IPR available	PANTHER	PTHR45717:SF45	OS12G0527900 PROTEIN	coord: 41..498
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 203..257 e-value: 1.2E-11 score: 44.5
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 354..380 e-value: 0.027 score: 14.7 coord: 143..172 e-value: 6.5E-4 score: 19.8 coord: 318..341 e-value: 0.0027 score: 17.8 coord: 281..308 e-value: 0.11 score: 12.8
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 143..172 e-value: 4.4E-4 score: 18.2 coord: 354..384 e-value: 5.7E-4 score: 17.9 coord: 211..245 e-value: 5.2E-7 score: 27.4 coord: 318..341 e-value: 0.0019 score: 16.3
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 140..174 score: 8.758137
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 349..383 score: 9.744654
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 209..243 score: 11.169622
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 70..274 e-value: 4.4E-28 score: 100.5 coord: 276..431 e-value: 3.6E-21 score: 77.8

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0020529.1	Sed0020529.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005515	protein binding