Sed0020509 (gene) Chayote v1

Overview


Name	Sed0020509
Type	gene
Organism	Sechium edule (Chayote v1)
Description	RING/U-box superfamily protein
Location	LG01: 8620899 .. 8623465 (-)
RNA-Seq Expression	Sed0020509
Synteny	Sed0020509

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGGCGTTTGCTTGTGCTTTTGCTTTAATCAGCTCGGAAAACAAATCGAATTATCGATTACGAGTTTTTTGTTCTTATCTTCTTTTTTTTTTCTGTTTGATTATGAGGTTAATCGGTAGGGTTTCGGTTCGAGATTTTGAATATATTTGATTCATCGTTCGTTTTCGTTCCATTGAAACTGTTCGATTTTTGGGGAAAATTCGACCGCCATGGGAAAGGTTTCGTTCAAGGAATCGCTGAAAGCGCTTGAAGCCGATGTTCAGCATGCCAATACCATGTGATTCTCTTAATCTTTGCTCTTTTGAAATCATAATTTTCGATTTCTGTGGAAATTTTTTGATCCCGTTATGAACACGCTCGTGAATTACGAATTGATTTTTCCCTGTTTATTGCTTGATTTTTCGGTTAATTTTCTGTCGTCGAGTTGATGCATATTTTACTGTTGACTGTACGAAGGACTGTTTAGTTCTTGAAACTGCATACATTGTTGATTGTTGGATGAGCAGTATAAATATCTTTGAGTGAATTGTCCAATCCAGTTAAGATGGATCCTATCTTCTGCACTGTTGCTGAATTTCATTATTTCTGTGTGTTTTTTTTTCCTTCAATTATCAGTGAATAGAAGTGAAATTTTATCAGGGAGTCAATTCTTTTTTTGTTAGACTGTCCGGGCCAGTTTGCACGAAGTTCGAGAGAATACTTTCCGACCCTCCTTGTAACATTTGGATGTCAAAAATCCCTAGATAATTAATTGCTAAATTTTTATATATTAATTTTCCAAGACTATTGACATGATGGATAGTAGTGGGTCAAATTGATAGGAAATTCACAAGAATTAGCATTAAATAATTGGTGATTTTTTTTAGTTGGTCTTTTCTAATTCCTCCCAAACCCTGGTTTTTGATTAAATTTTATCTGTTATTGTTTGTAGTGCTTTAGATTGTCCAAGAGAGAGTGATGGAGCTTGTGTTCAAATGAGATTATCTTACAGTCCTGCAGCTCCATTTTTCCTTTTTCTTGTTCAATGGACTGACTGCTACCTTGCTGGTGCCTTGGGGCTGCTAAGAATCCTTATCTATGTGGTATGTCTTTTACATTTACCATTTGGACATAATTGCCATTTACCAGTTGTTTTGTTTGTGTATGTAGTCTTGAAGGCCTTATCTGTACTAGCTTTAAGTTACATTCTGATTGACAAATAAATAAAATTCTGACCAATGAAGGTAGTAAATATCATTTAGTTGCTTTATGTTGTGATGCAGACTTACCCGGATGGAAAGACCACCATGTCCATTTACGAGCGAAAAGCTTGCATTAGAGAATTTTATGGTGAGTTACATTTTCAGAATGCAGCTATACTCAGTTTTTACTTTTATTACATCCAAATTCTGGTTTATCTGGTGGGGTTGTTAATGGATTGACACTCTCATCAACAGGGGTAATCTTCCCTTCTCTTTTGCAACTTCAAAAAGGTATTACAGAATTGGATGATAGAAAACAGAAGGAGGTTTGCAATGCCAGATACAAAAGAAGGGATGAATTTGGAAGGGGAAAACTATCAGAAATCGACATCGAAAGAGAAAAGGAGTGTGGAATCTGCATGGAGGTGAACGGCATGGTTGTTTTGCCTAATTGCAACCATTCTTTGTGCTTGAAGTGTTATCGAGATTGGTAAGTTTTTTTCCATGATTAAGGTCCCGTTTGATCGTCATTTAATTTTACGTTTTAGTCGAACACAATCTATCCCCAGCCCCACTTTATCTAAAAAAGAAGATAGAATTCCAAATTTCTTTTGAGGAAGTAGATTATGATGTTTATTCTTCAAACATGCTCAAAGTTGTCCACTTTTAAGACCAGCAATATATTTTTTCAACCCACAACAAAAGAATTATGAAATCAACACCTCTGTCGGCAACTGCAAGTGGGTCTATAACAAAATGCATCCCTGATCGTTCTCAGTCTTGTGGGGTAAAATTAAATCTTCTGTTGGATCTGAAAATCTGCATAACCATCCTGGTGGTGTCTTTTGTTTGCATTTATTGATAGCATTAATCTCAGACTCACATTCAACCTTATCTTTCTATCAATGACTACAATCTTATCCGTCTGTTTCTTGTCCAGGCACGATCGTTCTCAGTCGTGTCCCTTCTGTCGGGATAGCCTCAAGCGAGTCGACTCTGGCGACCTTTGGATCTACACAGACAAGAGTGAAGTGATTGATCTAAGTTCGATTTTGAAGGACAACCGGAAGAGACTGTTTGTGTACATTGATAAGTTGCCATTGGTAGTTCCAGATCCAGTGTTTCTTCCTGTTGAATCTTATATTAGGTGAAGAATGTGGTACACACATTTTCAATCTGTGAGTAGTAGTTGTAATTTCTGTATATATAATTATAGTTTGATTAAGTTGGCTCTGGCTAATGCTAGGATGTTGCTAATTTTCTGTTTCTTAGCTTATCAGAGTGAATGCTTTTGGTTCACCCAATTGTATTATTTCACCCACCCATCAATCAGTGCAAATCTTTTGTTGAAATATCAGCAAATCAAATTATTGATAAGGATAAATA

mRNA sequence

CCGGCGTTTGCTTGTGCTTTTGCTTTAATCAGCTCGGAAAACAAATCGAATTATCGATTACGAGTTTTTTGTTCTTATCTTCTTTTTTTTTTCTGTTTGATTATGAGGTTAATCGGTAGGGTTTCGGTTCGAGATTTTGAATATATTTGATTCATCGTTCGTTTTCGTTCCATTGAAACTGTTCGATTTTTGGGGAAAATTCGACCGCCATGGGAAAGGTTTCGTTCAAGGAATCGCTGAAAGCGCTTGAAGCCGATGTTCAGCATGCCAATACCATTGCTTTAGATTGTCCAAGAGAGAGTGATGGAGCTTGTGTTCAAATGAGATTATCTTACAGTCCTGCAGCTCCATTTTTCCTTTTTCTTGTTCAATGGACTGACTGCTACCTTGCTGGTGCCTTGGGGCTGCTAAGAATCCTTATCTATGTGACTTACCCGGATGGAAAGACCACCATGTCCATTTACGAGCGAAAAGCTTGCATTAGAGAATTTTATGGGGTAATCTTCCCTTCTCTTTTGCAACTTCAAAAAGGTATTACAGAATTGGATGATAGAAAACAGAAGGAGGTTTGCAATGCCAGATACAAAAGAAGGGATGAATTTGGAAGGGGAAAACTATCAGAAATCGACATCGAAAGAGAAAAGGAGTGTGGAATCTGCATGGAGGTGAACGGCATGGTTGTTTTGCCTAATTGCAACCATTCTTTGTGCTTGAAGTGTTATCGAGATTGGCACGATCGTTCTCAGTCGTGTCCCTTCTGTCGGGATAGCCTCAAGCGAGTCGACTCTGGCGACCTTTGGATCTACACAGACAAGAGTGAAGTGATTGATCTAAGTTCGATTTTGAAGGACAACCGGAAGAGACTGTTTGTGTACATTGATAAGTTGCCATTGGTAGTTCCAGATCCAGTGTTTCTTCCTGTTGAATCTTATATTAGGTGAAGAATGTGGTACACACATTTTCAATCTGTGAGTAGTAGTTGTAATTTCTGTATATATAATTATAGTTTGATTAAGTTGGCTCTGGCTAATGCTAGGATGTTGCTAATTTTCTGTTTCTTAGCTTATCAGAGTGAATGCTTTTGGTTCACCCAATTGTATTATTTCACCCACCCATCAATCAGTGCAAATCTTTTGTTGAAATATCAGCAAATCAAATTATTGATAAGGATAAATA

Coding sequence (CDS)

ATGGGAAAGGTTTCGTTCAAGGAATCGCTGAAAGCGCTTGAAGCCGATGTTCAGCATGCCAATACCATTGCTTTAGATTGTCCAAGAGAGAGTGATGGAGCTTGTGTTCAAATGAGATTATCTTACAGTCCTGCAGCTCCATTTTTCCTTTTTCTTGTTCAATGGACTGACTGCTACCTTGCTGGTGCCTTGGGGCTGCTAAGAATCCTTATCTATGTGACTTACCCGGATGGAAAGACCACCATGTCCATTTACGAGCGAAAAGCTTGCATTAGAGAATTTTATGGGGTAATCTTCCCTTCTCTTTTGCAACTTCAAAAAGGTATTACAGAATTGGATGATAGAAAACAGAAGGAGGTTTGCAATGCCAGATACAAAAGAAGGGATGAATTTGGAAGGGGAAAACTATCAGAAATCGACATCGAAAGAGAAAAGGAGTGTGGAATCTGCATGGAGGTGAACGGCATGGTTGTTTTGCCTAATTGCAACCATTCTTTGTGCTTGAAGTGTTATCGAGATTGGCACGATCGTTCTCAGTCGTGTCCCTTCTGTCGGGATAGCCTCAAGCGAGTCGACTCTGGCGACCTTTGGATCTACACAGACAAGAGTGAAGTGATTGATCTAAGTTCGATTTTGAAGGACAACCGGAAGAGACTGTTTGTGTACATTGATAAGTTGCCATTGGTAGTTCCAGATCCAGTGTTTCTTCCTGTTGAATCTTATATTAGGTGA

Protein sequence

MGKVSFKESLKALEADVQHANTIALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTMSIYERKACIREFYGVIFPSLLQLQKGITELDDRKQKEVCNARYKRRDEFGRGKLSEIDIEREKECGICMEVNGMVVLPNCNHSLCLKCYRDWHDRSQSCPFCRDSLKRVDSGDLWIYTDKSEVIDLSSILKDNRKRLFVYIDKLPLVVPDPVFLPVESYIR

Homology

[Close]

BLAST of Sed0020509 vs. NCBI nr
Match: XP_011658560.1 (E3 ubiquitin-protein ligase AIRP2 isoform X1 [Cucumis sativus])

HSP 1 Score: 469.2 bits (1206), Expect = 2.2e-128
Identity = 224/243 (92.18%), Postives = 235/243 (96.71%), Query Frame = 0


Query: 1   MGKVSFKESLKALEADVQHANTIALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYL 60
           MGK+SFK+SLKALEADVQHANT+ALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYL
Sbjct: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYL 60

Query: 61  AGALGLLRILIYVTYPDGKTTMSIYERKACIREFYGVIFPSLLQLQKGITELDDRKQKEV 120
           AGALGLLRILIYVTYPDGKTTMSIYERKA IREFY VIFPSLLQLQKGITEL+DRKQKEV
Sbjct: 61  AGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEV 120

Query: 121 CNARYKRRDEFGRGKLSEIDIEREKECGICMEVNGMVVLPNCNHSLCLKCYRDWHDRSQS 180
           CNARY RRDEFGRGKLSEIDIEREKECGICME NGMVVLPNCNHSLCLKCYRDW  RSQS
Sbjct: 121 CNARYSRRDEFGRGKLSEIDIEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQS 180

Query: 181 CPFCRDSLKRVDSGDLWIYTDKSEVIDLSSILKDNRKRLFVYIDKLPLVVPDPVFLPVES 240
           CPFCRDSLKRV+SGDLWI+TDKSE+IDL+SIL DNRKRLF YIDKLPLVVPDPVFLP++S
Sbjct: 181 CPFCRDSLKRVNSGDLWIFTDKSEMIDLNSILHDNRKRLFAYIDKLPLVVPDPVFLPMDS 240

Query: 241 YIR 244
           +IR
Sbjct: 241 HIR 243

[Close]

BLAST of Sed0020509 vs. NCBI nr
Match: XP_038893737.1 (E3 ubiquitin-protein ligase AIRP2 [Benincasa hispida])

HSP 1 Score: 466.8 bits (1200), Expect = 1.1e-127
Identity = 222/243 (91.36%), Postives = 235/243 (96.71%), Query Frame = 0


Query: 1   MGKVSFKESLKALEADVQHANTIALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYL 60
           MGK+SFK+SLKALEADVQHANT+ALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYL
Sbjct: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYL 60

Query: 61  AGALGLLRILIYVTYPDGKTTMSIYERKACIREFYGVIFPSLLQLQKGITELDDRKQKEV 120
           AGALGLLRILIYVTYPDGKTTMSIYERKA IREFY VIFPSLLQLQKGITEL+DRKQKEV
Sbjct: 61  AGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEV 120

Query: 121 CNARYKRRDEFGRGKLSEIDIEREKECGICMEVNGMVVLPNCNHSLCLKCYRDWHDRSQS 180
           CNARY RRDEFGRGKLSEIDIEREKECGICME NGMVVLPNCNHSLCLKCY+DW  RSQS
Sbjct: 121 CNARYNRRDEFGRGKLSEIDIEREKECGICMEFNGMVVLPNCNHSLCLKCYQDWRGRSQS 180

Query: 181 CPFCRDSLKRVDSGDLWIYTDKSEVIDLSSILKDNRKRLFVYIDKLPLVVPDPVFLPVES 240
           CPFCRDSLKRV+S DLWI+TDKSE+IDL+SIL+DNRKRLF YIDKLPLVVPDPVFLP++S
Sbjct: 181 CPFCRDSLKRVNSSDLWIFTDKSEMIDLTSILQDNRKRLFAYIDKLPLVVPDPVFLPIDS 240

Query: 241 YIR 244
           +IR
Sbjct: 241 HIR 243

[Close]

BLAST of Sed0020509 vs. NCBI nr
Match: KAA0031815.1 (E3 ubiquitin-protein ligase RNF8-A [Cucumis melo var. makuwa] >TYJ97319.1 E3 ubiquitin-protein ligase RNF8-A [Cucumis melo var. makuwa])

HSP 1 Score: 462.6 bits (1189), Expect = 2.1e-126
Identity = 220/243 (90.53%), Postives = 233/243 (95.88%), Query Frame = 0


Query: 1   MGKVSFKESLKALEADVQHANTIALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYL 60
           MGK+SFK+SLKALEADVQHANT+ALDCPRESDGACVQMRLSYSPAAP FLFLVQWTDCYL
Sbjct: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRLSYSPAAPLFLFLVQWTDCYL 60

Query: 61  AGALGLLRILIYVTYPDGKTTMSIYERKACIREFYGVIFPSLLQLQKGITELDDRKQKEV 120
           AGALGLLRIL+YVTYPDGKTTMSIYERKA I+EFY VIFPSLLQLQKGITEL+DRKQKEV
Sbjct: 61  AGALGLLRILLYVTYPDGKTTMSIYERKASIKEFYVVIFPSLLQLQKGITELEDRKQKEV 120

Query: 121 CNARYKRRDEFGRGKLSEIDIEREKECGICMEVNGMVVLPNCNHSLCLKCYRDWHDRSQS 180
           CNARY RRDEFGRGKLSEIDIEREKECGICME NGMVVLPNCNHSLCLKCYRDW  RSQS
Sbjct: 121 CNARYSRRDEFGRGKLSEIDIEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQS 180

Query: 181 CPFCRDSLKRVDSGDLWIYTDKSEVIDLSSILKDNRKRLFVYIDKLPLVVPDPVFLPVES 240
           CPFCRDSLKRV+SGDLWI+TDKSE+IDL+SIL DN KRLF YIDKLPLVVPDPVFLP++S
Sbjct: 181 CPFCRDSLKRVNSGDLWIFTDKSEMIDLNSILHDNCKRLFAYIDKLPLVVPDPVFLPIDS 240

Query: 241 YIR 244
           +IR
Sbjct: 241 HIR 243

[Close]

BLAST of Sed0020509 vs. NCBI nr
Match: XP_008457378.1 (PREDICTED: E3 ubiquitin-protein ligase RNF8-A [Cucumis melo])

HSP 1 Score: 462.6 bits (1189), Expect = 2.1e-126
Identity = 220/243 (90.53%), Postives = 233/243 (95.88%), Query Frame = 0


Query: 1   MGKVSFKESLKALEADVQHANTIALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYL 60
           MGK+SFK+SLKALEADVQHANT+ALDCPRESDGACVQMRLSYSPAAP FLFLVQWTDCYL
Sbjct: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRLSYSPAAPLFLFLVQWTDCYL 60

Query: 61  AGALGLLRILIYVTYPDGKTTMSIYERKACIREFYGVIFPSLLQLQKGITELDDRKQKEV 120
           AGALGLLRIL+YVTYPDGKTTMSIYERKA I+EFY VIFPSLLQLQKGITEL+DRKQKEV
Sbjct: 61  AGALGLLRILLYVTYPDGKTTMSIYERKASIKEFYVVIFPSLLQLQKGITELEDRKQKEV 120

Query: 121 CNARYKRRDEFGRGKLSEIDIEREKECGICMEVNGMVVLPNCNHSLCLKCYRDWHDRSQS 180
           CNARY RRDEFGRGKLSEIDIEREKECGICME NGMVVLPNCNHSLCLKCYRDW  RSQS
Sbjct: 121 CNARYSRRDEFGRGKLSEIDIEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQS 180

Query: 181 CPFCRDSLKRVDSGDLWIYTDKSEVIDLSSILKDNRKRLFVYIDKLPLVVPDPVFLPVES 240
           CPFCRDSLKRV+SGDLWI+TDKSE+IDL+SIL DN KRLF YIDKLPLVVPDPVFLP++S
Sbjct: 181 CPFCRDSLKRVNSGDLWIFTDKSEMIDLNSILHDNCKRLFAYIDKLPLVVPDPVFLPIDS 240

Query: 241 YIR 244
           +IR
Sbjct: 241 HIR 243

[Close]

BLAST of Sed0020509 vs. NCBI nr
Match: KAG6583367.1 (E3 ubiquitin-protein ligase AIRP2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019140.1 RING finger protein-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 462.6 bits (1189), Expect = 2.1e-126
Identity = 219/243 (90.12%), Postives = 237/243 (97.53%), Query Frame = 0


Query: 1   MGKVSFKESLKALEADVQHANTIALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYL 60
           MGK+SFK+SLKALEADVQ+ANT+ALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYL
Sbjct: 1   MGKLSFKDSLKALEADVQYANTLALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYL 60

Query: 61  AGALGLLRILIYVTYPDGKTTMSIYERKACIREFYGVIFPSLLQLQKGITELDDRKQKEV 120
           AGALGLLRILIYVTYPDGKTTM+IYERKA IREFY VIFPSLLQLQ+GITEL+DRKQKEV
Sbjct: 61  AGALGLLRILIYVTYPDGKTTMAIYERKASIREFYVVIFPSLLQLQRGITELEDRKQKEV 120

Query: 121 CNARYKRRDEFGRGKLSEIDIEREKECGICMEVNGMVVLPNCNHSLCLKCYRDWHDRSQS 180
           CNARYKRRDEFGRGKLSEIDIEREKECGICME+N MVVLPNCNHSLCL CYRDW +RSQS
Sbjct: 121 CNARYKRRDEFGRGKLSEIDIEREKECGICMEINTMVVLPNCNHSLCLMCYRDWRNRSQS 180

Query: 181 CPFCRDSLKRVDSGDLWIYTDKSEVIDLSSILKDNRKRLFVYIDKLPLVVPDPVFLPVES 240
           CPFCRDSLKRV+SGDLWI+TDKSE+IDL+SIL+DNRKRLF YI+KLPLVVPDPVFLP++S
Sbjct: 181 CPFCRDSLKRVNSGDLWIFTDKSEMIDLTSILQDNRKRLFAYIEKLPLVVPDPVFLPLDS 240

Query: 241 YIR 244
           +IR
Sbjct: 241 HIR 243

[Close]

BLAST of Sed0020509 vs. ExPASy Swiss-Prot
Match: Q9M022 (E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 2.4e-93
Identity = 158/233 (67.81%), Postives = 192/233 (82.40%), Query Frame = 0


Query: 5   SFKESLKALEADVQHANTIALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYLAGAL 64
           SFK+SLKALEAD+Q ANT+A + P E DG  VQMRLSYSPAA  FLFL+QWTDC+ AGAL
Sbjct: 4   SFKDSLKALEADIQFANTLASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCHFAGAL 63

Query: 65  GLLRILIYVTYPDGKTTMSIYERKACIREFYGVIFPSLLQLQKGITELDDRKQKEVCNAR 124
           GLLRILIY  Y DGKTTMS++ERK  IREFY V+FPSLLQL  GIT++++RKQKE+C+ R
Sbjct: 64  GLLRILIYKAYVDGKTTMSLHERKTSIREFYDVLFPSLLQLHGGITDVEERKQKEICDKR 123

Query: 125 YKRRDEFGRGKLSEIDIEREKECGICMEVNGMVVLPNCNHSLCLKCYRDWHDRSQSCPFC 184
           Y+++D   +GK+SEID+ERE+ECGIC+E+   VVLP CNHS+C+ CYR+W  RSQSCPFC
Sbjct: 124 YRKKDRTDKGKMSEIDLEREEECGICLEIRNKVVLPTCNHSMCINCYRNWRARSQSCPFC 183

Query: 185 RDSLKRVDSGDLWIYTDKSEVIDLSSILKDNRKRLFVYIDKLPLVVPDPVFLP 238
           R SLKRV+SGDLWIYT  +E+ DL +I K+N KRL +YIDKLPLV  DP  +P
Sbjct: 184 RGSLKRVNSGDLWIYTCSAEIADLPAIYKENLKRLLIYIDKLPLVTSDPNLVP 236

[Close]

BLAST of Sed0020509 vs. ExPASy Swiss-Prot
Match: Q4SRI6 (Probable E3 ubiquitin-protein ligase makorin-1 OS=Tetraodon nigroviridis OX=99883 GN=mkrn1 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.7e-06
Identity = 34/96 (35.42%), Postives = 42/96 (43.75%), Query Frame = 0


Query: 141 IEREKE--CGICMEV---------NGMVVLPNCNHSLCLKCYRDWHDRSQ-------SCP 200
           I+R K+  CG+CMEV             +L NCNH  CLKC R W    Q       SCP
Sbjct: 218 IQRSKDMMCGVCMEVVFEKANPSERRFGILSNCNHCYCLKCIRKWRSAKQFESKIIKSCP 277

Query: 201 FCRDSLKRVDSGDLWIYTDKSEVIDLSSILKDNRKR 219
            CR +   V   + W+  DK +   L    KD   R
Sbjct: 278 ECRITSNFVIPSEYWV-EDKEDKQKLIQKYKDGMGR 312

[Close]

BLAST of Sed0020509 vs. ExPASy Swiss-Prot
Match: Q13064 (Probable E3 ubiquitin-protein ligase makorin-3 OS=Homo sapiens OX=9606 GN=MKRN3 PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.8e-06
Identity = 26/77 (33.77%), Postives = 37/77 (48.05%), Query Frame = 0


Query: 144 EKECGICMEV---------NGMVVLPNCNHSLCLKCYRDWHDRSQ-------SCPFCRDS 203
           +K CGICMEV             +L NCNHS C++C R W    Q       SCP CR +
Sbjct: 308 DKVCGICMEVVYEKANPNDRRFGILSNCNHSFCIRCIRRWRSARQFENRIVKSCPQCRVT 367

Query: 204 LKRVDSGDLWIYTDKSE 205
            + V   + W+  ++ +
Sbjct: 368 SELVIPSEFWVEEEEEK 384

[Close]

BLAST of Sed0020509 vs. ExPASy Swiss-Prot
Match: Q13434 (Putative E3 ubiquitin-protein ligase makorin-4 OS=Homo sapiens OX=9606 GN=MKRN4P PE=5 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 5.0e-06
Identity = 26/72 (36.11%), Postives = 35/72 (48.61%), Query Frame = 0


Query: 143 REKECGICMEV---------NGMVVLPNCNHSLCLKCYRDWHDRSQ-------SCPFCRD 199
           ++K CGICMEV         +   +L NCNH+ CLKC R W    +       SCP CR 
Sbjct: 312 KDKVCGICMEVVYEKANPNEHRFGILSNCNHTFCLKCIRKWRSAKEFESRIVKSCPQCRI 371

[Close]

BLAST of Sed0020509 vs. ExPASy Swiss-Prot
Match: Q9UHC7 (E3 ubiquitin-protein ligase makorin-1 OS=Homo sapiens OX=9606 GN=MKRN1 PE=1 SV=3)

HSP 1 Score: 52.4 bits (124), Expect = 8.5e-06
Identity = 28/76 (36.84%), Postives = 36/76 (47.37%), Query Frame = 0


Query: 141 IEREKE--CGICMEV---------NGMVVLPNCNHSLCLKCYRDWHDRSQ-------SCP 199
           ++R K+  CGICMEV             +L NCNH+ CLKC R W    Q       SCP
Sbjct: 273 VQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCP 332

[Close]

BLAST of Sed0020509 vs. ExPASy TrEMBL
Match: A0A0A0LY84 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G530140 PE=4 SV=1)

HSP 1 Score: 469.2 bits (1206), Expect = 1.1e-128
Identity = 224/243 (92.18%), Postives = 235/243 (96.71%), Query Frame = 0


Query: 1   MGKVSFKESLKALEADVQHANTIALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYL 60
           MGK+SFK+SLKALEADVQHANT+ALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYL
Sbjct: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYL 60

Query: 61  AGALGLLRILIYVTYPDGKTTMSIYERKACIREFYGVIFPSLLQLQKGITELDDRKQKEV 120
           AGALGLLRILIYVTYPDGKTTMSIYERKA IREFY VIFPSLLQLQKGITEL+DRKQKEV
Sbjct: 61  AGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEV 120

Query: 121 CNARYKRRDEFGRGKLSEIDIEREKECGICMEVNGMVVLPNCNHSLCLKCYRDWHDRSQS 180
           CNARY RRDEFGRGKLSEIDIEREKECGICME NGMVVLPNCNHSLCLKCYRDW  RSQS
Sbjct: 121 CNARYSRRDEFGRGKLSEIDIEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQS 180

Query: 181 CPFCRDSLKRVDSGDLWIYTDKSEVIDLSSILKDNRKRLFVYIDKLPLVVPDPVFLPVES 240
           CPFCRDSLKRV+SGDLWI+TDKSE+IDL+SIL DNRKRLF YIDKLPLVVPDPVFLP++S
Sbjct: 181 CPFCRDSLKRVNSGDLWIFTDKSEMIDLNSILHDNRKRLFAYIDKLPLVVPDPVFLPMDS 240

Query: 241 YIR 244
           +IR
Sbjct: 241 HIR 243

[Close]

BLAST of Sed0020509 vs. ExPASy TrEMBL
Match: A0A5A7SRP4 (E3 ubiquitin-protein ligase RNF8-A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001250 PE=4 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 1.0e-126
Identity = 220/243 (90.53%), Postives = 233/243 (95.88%), Query Frame = 0


Query: 1   MGKVSFKESLKALEADVQHANTIALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYL 60
           MGK+SFK+SLKALEADVQHANT+ALDCPRESDGACVQMRLSYSPAAP FLFLVQWTDCYL
Sbjct: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRLSYSPAAPLFLFLVQWTDCYL 60

Query: 61  AGALGLLRILIYVTYPDGKTTMSIYERKACIREFYGVIFPSLLQLQKGITELDDRKQKEV 120
           AGALGLLRIL+YVTYPDGKTTMSIYERKA I+EFY VIFPSLLQLQKGITEL+DRKQKEV
Sbjct: 61  AGALGLLRILLYVTYPDGKTTMSIYERKASIKEFYVVIFPSLLQLQKGITELEDRKQKEV 120

Query: 121 CNARYKRRDEFGRGKLSEIDIEREKECGICMEVNGMVVLPNCNHSLCLKCYRDWHDRSQS 180
           CNARY RRDEFGRGKLSEIDIEREKECGICME NGMVVLPNCNHSLCLKCYRDW  RSQS
Sbjct: 121 CNARYSRRDEFGRGKLSEIDIEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQS 180

Query: 181 CPFCRDSLKRVDSGDLWIYTDKSEVIDLSSILKDNRKRLFVYIDKLPLVVPDPVFLPVES 240
           CPFCRDSLKRV+SGDLWI+TDKSE+IDL+SIL DN KRLF YIDKLPLVVPDPVFLP++S
Sbjct: 181 CPFCRDSLKRVNSGDLWIFTDKSEMIDLNSILHDNCKRLFAYIDKLPLVVPDPVFLPIDS 240

Query: 241 YIR 244
           +IR
Sbjct: 241 HIR 243

[Close]

BLAST of Sed0020509 vs. ExPASy TrEMBL
Match: A0A1S3C5C5 (E3 ubiquitin-protein ligase RNF8-A OS=Cucumis melo OX=3656 GN=LOC103497086 PE=4 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 1.0e-126
Identity = 220/243 (90.53%), Postives = 233/243 (95.88%), Query Frame = 0


Query: 1   MGKVSFKESLKALEADVQHANTIALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYL 60
           MGK+SFK+SLKALEADVQHANT+ALDCPRESDGACVQMRLSYSPAAP FLFLVQWTDCYL
Sbjct: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRLSYSPAAPLFLFLVQWTDCYL 60

Query: 61  AGALGLLRILIYVTYPDGKTTMSIYERKACIREFYGVIFPSLLQLQKGITELDDRKQKEV 120
           AGALGLLRIL+YVTYPDGKTTMSIYERKA I+EFY VIFPSLLQLQKGITEL+DRKQKEV
Sbjct: 61  AGALGLLRILLYVTYPDGKTTMSIYERKASIKEFYVVIFPSLLQLQKGITELEDRKQKEV 120

Query: 121 CNARYKRRDEFGRGKLSEIDIEREKECGICMEVNGMVVLPNCNHSLCLKCYRDWHDRSQS 180
           CNARY RRDEFGRGKLSEIDIEREKECGICME NGMVVLPNCNHSLCLKCYRDW  RSQS
Sbjct: 121 CNARYSRRDEFGRGKLSEIDIEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQS 180

Query: 181 CPFCRDSLKRVDSGDLWIYTDKSEVIDLSSILKDNRKRLFVYIDKLPLVVPDPVFLPVES 240
           CPFCRDSLKRV+SGDLWI+TDKSE+IDL+SIL DN KRLF YIDKLPLVVPDPVFLP++S
Sbjct: 181 CPFCRDSLKRVNSGDLWIFTDKSEMIDLNSILHDNCKRLFAYIDKLPLVVPDPVFLPIDS 240

Query: 241 YIR 244
           +IR
Sbjct: 241 HIR 243

[Close]

BLAST of Sed0020509 vs. ExPASy TrEMBL
Match: A0A6J1I3Y6 (E3 ubiquitin-protein ligase rnf8-A-like OS=Cucurbita maxima OX=3661 GN=LOC111469447 PE=4 SV=1)

HSP 1 Score: 462.2 bits (1188), Expect = 1.3e-126
Identity = 218/243 (89.71%), Postives = 237/243 (97.53%), Query Frame = 0


Query: 1   MGKVSFKESLKALEADVQHANTIALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYL 60
           MGK+SFK+SLKALEADVQ+ANT+ALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYL
Sbjct: 1   MGKLSFKDSLKALEADVQYANTLALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYL 60

Query: 61  AGALGLLRILIYVTYPDGKTTMSIYERKACIREFYGVIFPSLLQLQKGITELDDRKQKEV 120
           AGALGLLRILIYVTYPDGKTTM+IYERKA IREFY VIFPSLLQLQ+GITEL+DRKQKEV
Sbjct: 61  AGALGLLRILIYVTYPDGKTTMAIYERKASIREFYVVIFPSLLQLQRGITELEDRKQKEV 120

Query: 121 CNARYKRRDEFGRGKLSEIDIEREKECGICMEVNGMVVLPNCNHSLCLKCYRDWHDRSQS 180
           CNARYKRRDEFGRGKLSEIDIEREKECGICME+N MVVLPNCNHSLCL CYRDW +RSQS
Sbjct: 121 CNARYKRRDEFGRGKLSEIDIEREKECGICMEINTMVVLPNCNHSLCLMCYRDWRNRSQS 180

Query: 181 CPFCRDSLKRVDSGDLWIYTDKSEVIDLSSILKDNRKRLFVYIDKLPLVVPDPVFLPVES 240
           CPFCRDSLKRV+SGDLWI+TDKSE++DL+SIL+DNRKRLF YI+KLPLVVPDPVFLP++S
Sbjct: 181 CPFCRDSLKRVNSGDLWIFTDKSEMVDLTSILQDNRKRLFTYIEKLPLVVPDPVFLPLDS 240

Query: 241 YIR 244
           +IR
Sbjct: 241 HIR 243

[Close]

BLAST of Sed0020509 vs. ExPASy TrEMBL
Match: A0A6J1HMH6 (E3 ubiquitin-protein ligase rnf8-B-like OS=Cucurbita moschata OX=3662 GN=LOC111464952 PE=4 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 5.0e-126
Identity = 218/243 (89.71%), Postives = 236/243 (97.12%), Query Frame = 0


Query: 1   MGKVSFKESLKALEADVQHANTIALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYL 60
           MGK+SFK+SLKALEADVQ+ANT+ALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYL
Sbjct: 1   MGKLSFKDSLKALEADVQYANTLALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYL 60

Query: 61  AGALGLLRILIYVTYPDGKTTMSIYERKACIREFYGVIFPSLLQLQKGITELDDRKQKEV 120
           AGALGLLRILIYVTYPDGKTTM+IYERKA IREFY VIFPSLLQLQ+GITEL+DRKQKEV
Sbjct: 61  AGALGLLRILIYVTYPDGKTTMAIYERKASIREFYVVIFPSLLQLQRGITELEDRKQKEV 120

Query: 121 CNARYKRRDEFGRGKLSEIDIEREKECGICMEVNGMVVLPNCNHSLCLKCYRDWHDRSQS 180
           CNARYKRRDE GRGKLSEIDIEREKECGICME+N MVVLPNCNHSLCL CYRDW +RSQS
Sbjct: 121 CNARYKRRDEIGRGKLSEIDIEREKECGICMEINTMVVLPNCNHSLCLMCYRDWRNRSQS 180

Query: 181 CPFCRDSLKRVDSGDLWIYTDKSEVIDLSSILKDNRKRLFVYIDKLPLVVPDPVFLPVES 240
           CPFCRDSLKRV+SGDLWI+TDKSE+IDL+SIL+DNRKRLF YI+KLPLVVPDPVFLP++S
Sbjct: 181 CPFCRDSLKRVNSGDLWIFTDKSEMIDLTSILQDNRKRLFAYIEKLPLVVPDPVFLPLDS 240

Query: 241 YIR 244
           +IR
Sbjct: 241 HIR 243

[Close]

BLAST of Sed0020509 vs. TAIR 10
Match: AT3G47160.1 (RING/U-box superfamily protein )

HSP 1 Score: 384.0 bits (985), Expect = 8.7e-107
Identity = 177/235 (75.32%), Postives = 209/235 (88.94%), Query Frame = 0


Query: 1   MGKVSFKESLKALEADVQHANTIALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYL 60
           M KVSFK+SLKALEAD+QHANT+ALD PRE DGA VQMRLSY+PAA F LFLVQWTDC+L
Sbjct: 1   MAKVSFKDSLKALEADIQHANTVALDYPREKDGARVQMRLSYTPAAQFLLFLVQWTDCHL 60

Query: 61  AGALGLLRILIYVTYPDGKTTMSIYERKACIREFYGVIFPSLLQLQKGITELDDRKQKEV 120
           AG LGLLR+LIY+TY DGKTTMS+YERK  I++FY VIFPSLLQL++GIT+LDDRKQKEV
Sbjct: 61  AGTLGLLRVLIYMTYADGKTTMSVYERKTSIKDFYAVIFPSLLQLERGITDLDDRKQKEV 120

Query: 121 CNARYKRRDEFGRGKLSEIDIEREKECGICMEVNGMVVLPNCNHSLCLKCYRDWHDRSQS 180
           C  RY+ +DE  + KLSEIDIERE+ECGICME+N MVVLPNC HSLC+KCYRDWH RS+S
Sbjct: 121 CKIRYRNKDETEKVKLSEIDIEREEECGICMEMNNMVVLPNCTHSLCIKCYRDWHGRSES 180

Query: 181 CPFCRDSLKRVDSGDLWIYTDKSEVIDLSSILKDNRKRLFVYIDKLPLVVPDPVF 236
           CPFCRDSLKRV+SGDLW+  +KS+ +++ +I ++N+KRLFVYI+KLPLVVPD VF
Sbjct: 181 CPFCRDSLKRVNSGDLWMLMEKSDTVNMYTIERENKKRLFVYIEKLPLVVPDQVF 235

[Close]

BLAST of Sed0020509 vs. TAIR 10
Match: AT3G47160.2 (RING/U-box superfamily protein )

HSP 1 Score: 375.2 bits (962), Expect = 4.1e-104
Identity = 177/247 (71.66%), Postives = 209/247 (84.62%), Query Frame = 0


Query: 1   MGKVSFKESLKALEADVQHANTI------------ALDCPRESDGACVQMRLSYSPAAPF 60
           M KVSFK+SLKALEAD+QHANT+            ALD PRE DGA VQMRLSY+PAA F
Sbjct: 1   MAKVSFKDSLKALEADIQHANTVLSNELGDEVIFRALDYPREKDGARVQMRLSYTPAAQF 60

Query: 61  FLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTMSIYERKACIREFYGVIFPSLLQLQKG 120
            LFLVQWTDC+LAG LGLLR+LIY+TY DGKTTMS+YERK  I++FY VIFPSLLQL++G
Sbjct: 61  LLFLVQWTDCHLAGTLGLLRVLIYMTYADGKTTMSVYERKTSIKDFYAVIFPSLLQLERG 120

Query: 121 ITELDDRKQKEVCNARYKRRDEFGRGKLSEIDIEREKECGICMEVNGMVVLPNCNHSLCL 180
           IT+LDDRKQKEVC  RY+ +DE  + KLSEIDIERE+ECGICME+N MVVLPNC HSLC+
Sbjct: 121 ITDLDDRKQKEVCKIRYRNKDETEKVKLSEIDIEREEECGICMEMNNMVVLPNCTHSLCI 180

Query: 181 KCYRDWHDRSQSCPFCRDSLKRVDSGDLWIYTDKSEVIDLSSILKDNRKRLFVYIDKLPL 236
           KCYRDWH RS+SCPFCRDSLKRV+SGDLW+  +KS+ +++ +I ++N+KRLFVYI+KLPL
Sbjct: 181 KCYRDWHGRSESCPFCRDSLKRVNSGDLWMLMEKSDTVNMYTIERENKKRLFVYIEKLPL 240

[Close]

BLAST of Sed0020509 vs. TAIR 10
Match: AT5G58787.1 (RING/U-box superfamily protein )

HSP 1 Score: 368.6 bits (945), Expect = 3.8e-102
Identity = 172/245 (70.20%), Postives = 210/245 (85.71%), Query Frame = 0


Query: 1   MGKVSFKESLKALEADVQHANTIALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYL 60
           M K+SFK+SLKALEAD+QHANT+ALD PRE DGA VQMRLSYSP A FFLFLVQWTDC L
Sbjct: 1   MAKLSFKDSLKALEADIQHANTLALDYPREKDGARVQMRLSYSPTAQFFLFLVQWTDCKL 60

Query: 61  AGALGLLRILIYVTYPDGKTTMSIYERKACIREFYGVIFPSLLQLQKGITELDDRKQKEV 120
           AG LGLLR+LIY+TY DGKTTMS+YERKA IREF  VI PSL QLQ+G+T++DD KQKEV
Sbjct: 61  AGFLGLLRVLIYMTYADGKTTMSVYERKASIREFQAVILPSLSQLQRGVTDIDDSKQKEV 120

Query: 121 CNARYKRRDEFGRGKLSEIDIEREKECGICMEVNGMVVLPNCNHSLCLKCYRDWHDRSQS 180
           C  RY+++DE    ++SEI+IERE+ECGICME+N  VVLPNC HSLC+KCYRDW  RSQS
Sbjct: 121 CKMRYRKKDE---SEMSEIEIEREEECGICMEMNSKVVLPNCTHSLCIKCYRDWRGRSQS 180

Query: 181 CPFCRDSLKRVDSGDLWIYTDKSEVIDLSSILKDNRKRLFVYIDKLPLVVPDPVFL--PV 240
           CPFCRDSLKRVDSGDLW++ D+++ ++L++I ++N+KRLF+YI+KLPLVVPD V+   P 
Sbjct: 181 CPFCRDSLKRVDSGDLWMFLDQNDTVNLTAIARENQKRLFMYIEKLPLVVPDQVYASSPY 240

Query: 241 ESYIR 244
           + ++R
Sbjct: 241 DFHVR 242

[Close]

BLAST of Sed0020509 vs. TAIR 10
Match: AT5G01520.1 (RING/U-box superfamily protein )

HSP 1 Score: 343.2 bits (879), Expect = 1.7e-94
Identity = 158/233 (67.81%), Postives = 192/233 (82.40%), Query Frame = 0


Query: 5   SFKESLKALEADVQHANTIALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYLAGAL 64
           SFK+SLKALEAD+Q ANT+A + P E DG  VQMRLSYSPAA  FLFL+QWTDC+ AGAL
Sbjct: 4   SFKDSLKALEADIQFANTLASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCHFAGAL 63

Query: 65  GLLRILIYVTYPDGKTTMSIYERKACIREFYGVIFPSLLQLQKGITELDDRKQKEVCNAR 124
           GLLRILIY  Y DGKTTMS++ERK  IREFY V+FPSLLQL  GIT++++RKQKE+C+ R
Sbjct: 64  GLLRILIYKAYVDGKTTMSLHERKTSIREFYDVLFPSLLQLHGGITDVEERKQKEICDKR 123

Query: 125 YKRRDEFGRGKLSEIDIEREKECGICMEVNGMVVLPNCNHSLCLKCYRDWHDRSQSCPFC 184
           Y+++D   +GK+SEID+ERE+ECGIC+E+   VVLP CNHS+C+ CYR+W  RSQSCPFC
Sbjct: 124 YRKKDRTDKGKMSEIDLEREEECGICLEIRNKVVLPTCNHSMCINCYRNWRARSQSCPFC 183

Query: 185 RDSLKRVDSGDLWIYTDKSEVIDLSSILKDNRKRLFVYIDKLPLVVPDPVFLP 238
           R SLKRV+SGDLWIYT  +E+ DL +I K+N KRL +YIDKLPLV  DP  +P
Sbjct: 184 RGSLKRVNSGDLWIYTCSAEIADLPAIYKENLKRLLIYIDKLPLVTSDPNLVP 236

[Close]

BLAST of Sed0020509 vs. TAIR 10
Match: AT5G58787.2 (RING/U-box superfamily protein )

HSP 1 Score: 338.2 bits (866), Expect = 5.5e-93
Identity = 162/245 (66.12%), Postives = 198/245 (80.82%), Query Frame = 0


Query: 1   MGKVSFKESLKALEADVQHANTIALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYL 60
           M K+SFK+SLKALEAD+QHANT+ALD PRE DGA VQMRLSYSP A FFLFLVQWTDC L
Sbjct: 1   MAKLSFKDSLKALEADIQHANTLALDYPREKDGARVQMRLSYSPTAQFFLFLVQWTDCKL 60

Query: 61  AGALGLLRILIYVTYPDGKTTMSIYERKACIREFYGVIFPSLLQLQKGITELDDRKQKEV 120
           AG LGLLR+LIY+TY DGKTTMS+YERKA IREF                ++DD KQKEV
Sbjct: 61  AGFLGLLRVLIYMTYADGKTTMSVYERKASIREF---------------QDIDDSKQKEV 120

Query: 121 CNARYKRRDEFGRGKLSEIDIEREKECGICMEVNGMVVLPNCNHSLCLKCYRDWHDRSQS 180
           C  RY+++DE    ++SEI+IERE+ECGICME+N  VVLPNC HSLC+KCYRDW  RSQS
Sbjct: 121 CKMRYRKKDE---SEMSEIEIEREEECGICMEMNSKVVLPNCTHSLCIKCYRDWRGRSQS 180

Query: 181 CPFCRDSLKRVDSGDLWIYTDKSEVIDLSSILKDNRKRLFVYIDKLPLVVPDPVFL--PV 240
           CPFCRDSLKRVDSGDLW++ D+++ ++L++I ++N+KRLF+YI+KLPLVVPD V+   P 
Sbjct: 181 CPFCRDSLKRVDSGDLWMFLDQNDTVNLTAIARENQKRLFMYIEKLPLVVPDQVYASSPY 227

Query: 241 ESYIR 244
           + ++R
Sbjct: 241 DFHVR 227

The following BLAST results are available for this feature:

BLAST of Sed0020509 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011658560.1	2.2e-128	92.18	E3 ubiquitin-protein ligase AIRP2 isoform X1 [Cucumis sativus]	[more]
XP_038893737.1	1.1e-127	91.36	E3 ubiquitin-protein ligase AIRP2 [Benincasa hispida]	[more]
KAA0031815.1	2.1e-126	90.53	E3 ubiquitin-protein ligase RNF8-A [Cucumis melo var. makuwa] >TYJ97319.1 E3 ubi...	[more]
XP_008457378.1	2.1e-126	90.53	PREDICTED: E3 ubiquitin-protein ligase RNF8-A [Cucumis melo]	[more]
KAG6583367.1	2.1e-126	90.12	E3 ubiquitin-protein ligase AIRP2, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Sed0020509 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M022	2.4e-93	67.81	E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 ...	[more]
Q4SRI6	1.7e-06	35.42	Probable E3 ubiquitin-protein ligase makorin-1 OS=Tetraodon nigroviridis OX=9988...	[more]
Q13064	3.8e-06	33.77	Probable E3 ubiquitin-protein ligase makorin-3 OS=Homo sapiens OX=9606 GN=MKRN3 ...	[more]
Q13434	5.0e-06	36.11	Putative E3 ubiquitin-protein ligase makorin-4 OS=Homo sapiens OX=9606 GN=MKRN4P...	[more]
Q9UHC7	8.5e-06	36.84	E3 ubiquitin-protein ligase makorin-1 OS=Homo sapiens OX=9606 GN=MKRN1 PE=1 SV=3	[more]

BLAST of Sed0020509 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LY84	1.1e-128	92.18	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G530140 P...	[more]
A0A5A7SRP4	1.0e-126	90.53	E3 ubiquitin-protein ligase RNF8-A OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3C5C5	1.0e-126	90.53	E3 ubiquitin-protein ligase RNF8-A OS=Cucumis melo OX=3656 GN=LOC103497086 PE=4 ...	[more]
A0A6J1I3Y6	1.3e-126	89.71	E3 ubiquitin-protein ligase rnf8-A-like OS=Cucurbita maxima OX=3661 GN=LOC111469...	[more]
A0A6J1HMH6	5.0e-126	89.71	E3 ubiquitin-protein ligase rnf8-B-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of Sed0020509 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47160.1	8.7e-107	75.32	RING/U-box superfamily protein	[more]
AT3G47160.2	4.1e-104	71.66	RING/U-box superfamily protein	[more]
AT5G58787.1	3.8e-102	70.20	RING/U-box superfamily protein	[more]
AT5G01520.1	1.7e-94	67.81	RING/U-box superfamily protein	[more]
AT5G58787.2	5.5e-93	66.12	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 113..174 e-value: 3.6E-7 score: 31.4
None	No IPR available	PANTHER	PTHR15315	RING FINGER PROTEIN 41, 151	coord: 1..174
None	No IPR available	PANTHER	PTHR15315:SF75	RING/U-BOX SUPERFAMILY PROTEIN	coord: 1..174
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 135..174
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 162..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0020509.1	Sed0020509.1	mRNA
Sed0020509.2	Sed0020509.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005829	cytosol
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0061630	ubiquitin protein ligase activity