Sed0020495 (gene) Chayote v1

Overview


Name	Sed0020495
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Threonine dehydratase
Location	LG10: 10975004 .. 10976681 (+)
RNA-Seq Expression	Sed0020495
Synteny	Sed0020495

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATTGCACGTAAAATTAGGGACAAAGTTCATGCCATTTTTGTGCCTGTTGGAAGTGGCAGTCAAGTTTGTGGTATTGCATGTTATTACAAATTCCTTTATCCCAAGGCGAGCACAATCTCTTGCTCTTATATCATGTTAGATGATATGTTCGTTAATTCTTTTTAGTGTAATATTTCTTATCTTTTTCCATACGCAGGTATTGATTTTTGGGGTGCAGCTAGATGAGGAAAACTCAATGGCGCAAGCGTTACATTTTGGCGAAATAGTGAGGGTGAAAGATATTGATCATTTTGCAGATGGAATAGCTGTTAAACAAGTTGGCGACGAGGCTTTTAGAATTTGCTGGGAACTCGTCGATGATATTATTCTTGTTAACAAACACTTGGTAGCCGTTGCAATGAAGGTCTTTTGATATACACTTAGTCACCCCATATAACTATACATAAAAATGAAATTTTAGACAAATAATTTCAACTAATTTAGACTTTTTAGCTCTTTCGTTTTTGAAAACTAAACTTATTTTCTCTACGATGAAAGTATTATCATGATCTTAAGAAATTTAATATAAAAACGGCAAGAAAGAAAGTAAAAGAGAATAACACATAAATTTATGTGGCTCATTAATGTTATGTTAGCTACTCTATGGGTTGAGTGGAGGCACAGTTTCATTAAGGGGAGCGAAAATAGAGGATAAATATTATGGGGCTAGGGTTTAATTCAAGCTTATATAGTAAACTCTCATTAAAACATATTACAAATAAGACCCAAATAATACATAAAAGTTTATAAACGAAAATAGAAACAACAATATAGATTTCATAGGAAGATTAACTCGTTCAAGGCATATTTCAACAAAATATATATATTCTGTAAAAGGTTTTGGAAACTTTCTTTTTAGAATAATAAAGTTATTTTTTTGGTCTCTTTCTTTCAAGTTAAATAATTTTTACTTGTAACATTTCAATAATGCTCTTTTTTAGTTCTTTTTATGTTTATTTTATAATTATTTTTTTAATTGGGTATTTGGAGTTTTCGCTCCAATATATCTGAGGTAACATTGACATGTCTTTAGAGCGTGACATCGGGATACATCATAGTATGTTCTAGTTTAAGCGCTTCCTAATGGTCGTCTCGAACAAGGGACCTTTAGGAATAATTCATTTGTGTCTTTTGAGTTTATTGTTTTTTTTAATTTATTTTAAAAAATTAATTTCATGTCAAGAGCAAAAGACTAAAAGAACAACTTTAATGACATTATGATTTGATATTGCCTAGTTATAATCTTAATGATCAACATTCTATTATGTAACTAACTAACAATTTTGCTATCTAAAAAACCAAAAGTTAGCATTGATAAAAATTCGAAGGGTCGAAGTATTTGATTTTAAAACATAAAAACCAAAACGTAAAAGTTTTTAAAACACAGAAAGTTGATAATAGAACATAAGTATATATAATTGAATTTATAAGTTTAAGTTTTCATAAACAAAATAGTTATTATAAACGCTTTGAAGCTAACACAAAACCCTAAAGTTAATTTTGATTTGACATACAGGATATGTTTAACGATGAGAGGAGCATTTTGGAACCATCAGGTGCTCTTTCAATTGCTGCAGCTATAAGGCATACTGCAGTCACAATAACATTCGAGGACAAGAAATTGTGGCAGTGA

mRNA sequence

ATGGAAATTGCACGTAAAATTAGGGACAAAGTTCATGCCATTTTTGTGCCTGTTGGAAGTGGCAGTCAAGTATTGATTTTTGGGGTGCAGCTAGATGAGGAAAACTCAATGGCGCAAGCGTTACATTTTGGCGAAATAGTGAGGGTGAAAGATATTGATCATTTTGCAGATGGAATAGCTGTTAAACAAGTTGGCGACGAGGCTTTTAGAATTTGCTGGGAACTCGTCGATGATATTATTCTTGTTAACAAACACTTGGTAGCCGTTGCAATGAAGGATATGTTTAACGATGAGAGGAGCATTTTGGAACCATCAGGTGCTCTTTCAATTGCTGCAGCTATAAGGCATACTGCAGTCACAATAACATTCGAGGACAAGAAATTGTGGCAGTGA

Coding sequence (CDS)

ATGGAAATTGCACGTAAAATTAGGGACAAAGTTCATGCCATTTTTGTGCCTGTTGGAAGTGGCAGTCAAGTATTGATTTTTGGGGTGCAGCTAGATGAGGAAAACTCAATGGCGCAAGCGTTACATTTTGGCGAAATAGTGAGGGTGAAAGATATTGATCATTTTGCAGATGGAATAGCTGTTAAACAAGTTGGCGACGAGGCTTTTAGAATTTGCTGGGAACTCGTCGATGATATTATTCTTGTTAACAAACACTTGGTAGCCGTTGCAATGAAGGATATGTTTAACGATGAGAGGAGCATTTTGGAACCATCAGGTGCTCTTTCAATTGCTGCAGCTATAAGGCATACTGCAGTCACAATAACATTCGAGGACAAGAAATTGTGGCAGTGA

Protein sequence

MEIARKIRDKVHAIFVPVGSGSQVLIFGVQLDEENSMAQALHFGEIVRVKDIDHFADGIAVKQVGDEAFRICWELVDDIILVNKHLVAVAMKDMFNDERSILEPSGALSIAAAIRHTAVTITFEDKKLWQ

Homology

[Close]

BLAST of Sed0020495 vs. NCBI nr
Match: XP_022977240.1 (threonine dehydratase biosynthetic, chloroplastic-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 154.8 bits (390), Expect = 5.0e-34
Identity = 78/127 (61.42%), Postives = 96/127 (75.59%), Query Frame = 0


Query: 1   MEIARKIRDKVHAIFVPVGSGS--------------QVLIFGVQLDEENSMAQALHFGEI 60
           MEI R+IR K+HAIFVP+G G                V +FGV+ +++NSMAQAL+ GEI
Sbjct: 271 MEIGRQIRGKIHAIFVPIGGGGLASGIVSFYKLVYPDVKVFGVEPNDQNSMAQALYRGEI 330

Query: 61  VRVKDIDHFADGIAVKQVGDEAFRICWELVDDIILVNKHLVAVAMKDMFNDERSILEPSG 114
           V V DI HFADG+AV+QVGDE FRIC+EL+DD+ILV K  ++ A+KDMFND R+ILEPSG
Sbjct: 331 VNVTDIGHFADGVAVQQVGDETFRICYELLDDVILVKKESISAAIKDMFNDGRNILEPSG 390

[Close]

BLAST of Sed0020495 vs. NCBI nr
Match: XP_022977241.1 (threonine dehydratase biosynthetic, chloroplastic-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 154.8 bits (390), Expect = 5.0e-34
Identity = 78/127 (61.42%), Postives = 96/127 (75.59%), Query Frame = 0


Query: 1   MEIARKIRDKVHAIFVPVGSGS--------------QVLIFGVQLDEENSMAQALHFGEI 60
           MEI R+IR K+HAIFVP+G G                V +FGV+ +++NSMAQAL+ GEI
Sbjct: 271 MEIGRQIRGKIHAIFVPIGGGGLASGIVSFYKLVYPDVKVFGVEPNDQNSMAQALYRGEI 330

Query: 61  VRVKDIDHFADGIAVKQVGDEAFRICWELVDDIILVNKHLVAVAMKDMFNDERSILEPSG 114
           V V DI HFADG+AV+QVGDE FRIC+EL+DD+ILV K  ++ A+KDMFND R+ILEPSG
Sbjct: 331 VNVTDIGHFADGVAVQQVGDETFRICYELLDDVILVKKESISAAIKDMFNDGRNILEPSG 390

[Close]

BLAST of Sed0020495 vs. NCBI nr
Match: KAG6604380.1 (Threonine dehydratase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 153.3 bits (386), Expect = 1.4e-33
Identity = 77/127 (60.63%), Postives = 96/127 (75.59%), Query Frame = 0


Query: 1   MEIARKIRDKVHAIFVPVGSGS--------------QVLIFGVQLDEENSMAQALHFGEI 60
           MEI R+IR K+HAIFVP+G G                V +FGV+ +++NSMAQAL+ GEI
Sbjct: 274 MEIGRQIRGKIHAIFVPIGGGGLASGIVSFYKLVYPDVKVFGVEPNDQNSMAQALYRGEI 333

Query: 61  VRVKDIDHFADGIAVKQVGDEAFRICWELVDDIILVNKHLVAVAMKDMFNDERSILEPSG 114
           V V DI HFADG+AV+QVG+E FRIC+EL+DD+ILV K  ++ A+KDMFND R+ILEPSG
Sbjct: 334 VNVTDIGHFADGVAVQQVGEETFRICYELLDDVILVKKESISAAIKDMFNDGRNILEPSG 393

[Close]

BLAST of Sed0020495 vs. NCBI nr
Match: XP_023543427.1 (threonine dehydratase biosynthetic, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 153.3 bits (386), Expect = 1.4e-33
Identity = 77/127 (60.63%), Postives = 96/127 (75.59%), Query Frame = 0


Query: 1   MEIARKIRDKVHAIFVPVGSGS--------------QVLIFGVQLDEENSMAQALHFGEI 60
           MEI R+IR K+HAIFVP+G G                V +FGV+ +++NSMAQAL+ GEI
Sbjct: 274 MEIGRQIRGKIHAIFVPIGGGGLASGIVSFYKLVYPDVKVFGVEPNDQNSMAQALYRGEI 333

Query: 61  VRVKDIDHFADGIAVKQVGDEAFRICWELVDDIILVNKHLVAVAMKDMFNDERSILEPSG 114
           V V DI HFADG+AV+QVG+E FRIC+EL+DD+ILV K  ++ A+KDMFND R+ILEPSG
Sbjct: 334 VNVTDIGHFADGVAVQQVGEETFRICYELLDDVILVKKESISAAIKDMFNDGRNILEPSG 393

[Close]

BLAST of Sed0020495 vs. NCBI nr
Match: KAG7034531.1 (Threonine dehydratase biosynthetic, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 153.3 bits (386), Expect = 1.4e-33
Identity = 77/127 (60.63%), Postives = 96/127 (75.59%), Query Frame = 0


Query: 1   MEIARKIRDKVHAIFVPVGSGS--------------QVLIFGVQLDEENSMAQALHFGEI 60
           MEI R+IR K+HAIFVP+G G                V +FGV+ +++NSMAQAL+ GEI
Sbjct: 274 MEIGRQIRGKIHAIFVPIGGGGLASGIVSFYKLVYPDVKVFGVEPNDQNSMAQALYRGEI 333

Query: 61  VRVKDIDHFADGIAVKQVGDEAFRICWELVDDIILVNKHLVAVAMKDMFNDERSILEPSG 114
           V V DI HFADG+AV+QVG+E FRIC+EL+DD+ILV K  ++ A+KDMFND R+ILEPSG
Sbjct: 334 VNVTDIGHFADGVAVQQVGEETFRICYELLDDVILVKKESISAAIKDMFNDGRNILEPSG 393

[Close]

BLAST of Sed0020495 vs. ExPASy Swiss-Prot
Match: A0FKE6 (Threonine dehydratase 1 biosynthetic, chloroplastic OS=Solanum lycopersicum OX=4081 GN=TD1 PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 5.7e-25
Identity = 55/127 (43.31%), Postives = 84/127 (66.14%), Query Frame = 0


Query: 1   MEIARKIRDKVHAIFVPVGSGS--------------QVLIFGVQLDEENSMAQALHFGEI 60
           MEI R+++D +HAIFVPVG G                + I GV+  + N++A +LH G+ 
Sbjct: 263 MEINRQLKDNIHAIFVPVGGGGLIAGIAAYLKRVAPDIKIIGVEPLDANALALSLHHGQR 322

Query: 61  VRVKDIDHFADGIAVKQVGDEAFRICWELVDDIILVNKHLVAVAMKDMFNDERSILEPSG 114
           V +  +  FADG+AVK VG+E +R+C EL+D ++LV +  +  ++KDMF ++RSILEP+G
Sbjct: 323 VMLDQVGGFADGVAVKVVGEETYRLCEELIDGVVLVGRDAICASIKDMFEEKRSILEPAG 382

[Close]

BLAST of Sed0020495 vs. ExPASy Swiss-Prot
Match: Q9ZSS6 (Threonine dehydratase biosynthetic, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OMR1 PE=1 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.8e-23
Identity = 56/127 (44.09%), Postives = 82/127 (64.57%), Query Frame = 0


Query: 1   MEIARKIRDKVHAIFVPVGSGS--------------QVLIFGVQLDEENSMAQALHFGEI 60
           MEI R+ +  +HAIFVPVG G               +V I GV+  + N+MA +LH GE 
Sbjct: 250 MEITRQAKGPLHAIFVPVGGGGLIAGIAAYVKRVSPEVKIIGVEPADANAMALSLHHGER 309

Query: 61  VRVKDIDHFADGIAVKQVGDEAFRICWELVDDIILVNKHLVAVAMKDMFNDERSILEPSG 114
           V +  +  FADG+AVK+VG+E FRI   L+D ++LV +  +  ++KDMF ++R+ILEP+G
Sbjct: 310 VILDQVGGFADGVAVKEVGEETFRISRNLMDGVVLVTRDAICASIKDMFEEKRNILEPAG 369

[Close]

BLAST of Sed0020495 vs. ExPASy Swiss-Prot
Match: P53607 (L-threonine dehydratase biosynthetic IlvA OS=Burkholderia multivorans (strain ATCC 17616 / 249) OX=395019 GN=ilvA PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.6e-22
Identity = 53/127 (41.73%), Postives = 80/127 (62.99%), Query Frame = 0


Query: 1   MEIARKIRDKVHAIFVPVGSGS--------------QVLIFGVQLDEENSMAQALHFGEI 60
           MEI R+ +  +HAIFVP+G G               ++ + GVQ ++  +MAQ+L  G+ 
Sbjct: 164 MEILRQHQGPIHAIFVPIGGGGLAAGVAAYVKAVRPEIKVIGVQAEDSCAMAQSLQAGKR 223

Query: 61  VRVKDIDHFADGIAVKQVGDEAFRICWELVDDIILVNKHLVAVAMKDMFNDERSILEPSG 114
           V + ++  FADG AVK VG+E FR+C E +D ++ V+   +  A+KD+F D RS+LEPSG
Sbjct: 224 VELAEVGLFADGTAVKLVGEETFRLCKEYLDGVVTVDTDALCAAIKDVFQDTRSVLEPSG 283

[Close]

BLAST of Sed0020495 vs. ExPASy Swiss-Prot
Match: Q9AXU4 (Threonine dehydratase OS=Nicotiana attenuata OX=49451 GN=TD PE=1 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 5.9e-22
Identity = 53/126 (42.06%), Postives = 85/126 (67.46%), Query Frame = 0


Query: 2   EIARKIRDKVHAIFVPVGSGSQVL--------------IFGVQLDEENSMAQALHFGEIV 61
           EI R+++D +HA+FVPVG G  +               I GV+    +SM Q+L+ GE V
Sbjct: 260 EINRQLKD-IHAVFVPVGGGGLIAGVAAYFKRVAPHTKIIGVEPFGASSMTQSLYHGERV 319

Query: 62  RVKDIDHFADGIAVKQVGDEAFRICWELVDDIILVNKHLVAVAMKDMFNDERSILEPSGA 114
           +++ +D+FADG+AV  VG+E FR+C +L+D ++LV+   ++ A+KD++++ R+ILE SGA
Sbjct: 320 KLEQVDNFADGVAVALVGEETFRLCKDLIDGMVLVSNDAISAAVKDVYDEGRNILETSGA 379

[Close]

BLAST of Sed0020495 vs. ExPASy Swiss-Prot
Match: O42615 (Threonine dehydratase, mitochondrial OS=Blastobotrys adeninivorans OX=409370 GN=ILV1 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 9.4e-20
Identity = 51/131 (38.93%), Postives = 83/131 (63.36%), Query Frame = 0


Query: 1   MEIARKIR-DKVHAIFVPVGSGS--------------QVLIFGVQLDEENSMAQALHFGE 60
           +E+ R+I  + + AIFV +G G               QV I GV+  + N+M Q+L  GE
Sbjct: 195 VELLRQIDVESLKAIFVCIGGGGLIAGVGAYIKRIAPQVKIIGVETYDANAMRQSLQKGE 254

Query: 61  IVRVKDIDHFADGIAVKQVGDEAFRICWELVDDIILVNKHLVAVAMKDMFNDERSILEPS 117
            + + ++  FADG AVK +G+E FR+C ++VD+I+LV+   +  A+KD+F + RSI+EP+
Sbjct: 255 RITLSEVGLFADGAAVKILGEETFRLCQQVVDEIVLVSTDEICAAIKDVFTETRSIVEPA 314

[Close]

BLAST of Sed0020495 vs. ExPASy TrEMBL
Match: A0A6J1IJC6 (Threonine dehydratase OS=Cucurbita maxima OX=3661 GN=LOC111477609 PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 2.4e-34
Identity = 78/127 (61.42%), Postives = 96/127 (75.59%), Query Frame = 0


Query: 1   MEIARKIRDKVHAIFVPVGSGS--------------QVLIFGVQLDEENSMAQALHFGEI 60
           MEI R+IR K+HAIFVP+G G                V +FGV+ +++NSMAQAL+ GEI
Sbjct: 271 MEIGRQIRGKIHAIFVPIGGGGLASGIVSFYKLVYPDVKVFGVEPNDQNSMAQALYRGEI 330

Query: 61  VRVKDIDHFADGIAVKQVGDEAFRICWELVDDIILVNKHLVAVAMKDMFNDERSILEPSG 114
           V V DI HFADG+AV+QVGDE FRIC+EL+DD+ILV K  ++ A+KDMFND R+ILEPSG
Sbjct: 331 VNVTDIGHFADGVAVQQVGDETFRICYELLDDVILVKKESISAAIKDMFNDGRNILEPSG 390

[Close]

BLAST of Sed0020495 vs. ExPASy TrEMBL
Match: A0A6J1ILR7 (Threonine dehydratase OS=Cucurbita maxima OX=3661 GN=LOC111477609 PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 2.4e-34
Identity = 78/127 (61.42%), Postives = 96/127 (75.59%), Query Frame = 0


Query: 1   MEIARKIRDKVHAIFVPVGSGS--------------QVLIFGVQLDEENSMAQALHFGEI 60
           MEI R+IR K+HAIFVP+G G                V +FGV+ +++NSMAQAL+ GEI
Sbjct: 271 MEIGRQIRGKIHAIFVPIGGGGLASGIVSFYKLVYPDVKVFGVEPNDQNSMAQALYRGEI 330

Query: 61  VRVKDIDHFADGIAVKQVGDEAFRICWELVDDIILVNKHLVAVAMKDMFNDERSILEPSG 114
           V V DI HFADG+AV+QVGDE FRIC+EL+DD+ILV K  ++ A+KDMFND R+ILEPSG
Sbjct: 331 VNVTDIGHFADGVAVQQVGDETFRICYELLDDVILVKKESISAAIKDMFNDGRNILEPSG 390

[Close]

BLAST of Sed0020495 vs. ExPASy TrEMBL
Match: A0A6J1ECR5 (Threonine dehydratase OS=Cucurbita moschata OX=3662 GN=LOC111433136 PE=3 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 2.0e-33
Identity = 76/127 (59.84%), Postives = 95/127 (74.80%), Query Frame = 0


Query: 1   MEIARKIRDKVHAIFVPVGSGS--------------QVLIFGVQLDEENSMAQALHFGEI 60
           MEI R+IR K+HAIFVP+G G                V +FGV+ +++NSMAQAL+ GEI
Sbjct: 274 MEIGRQIRGKIHAIFVPIGGGGLASGIVSFYKLVYPDVKVFGVEPNDQNSMAQALYRGEI 333

Query: 61  VRVKDIDHFADGIAVKQVGDEAFRICWELVDDIILVNKHLVAVAMKDMFNDERSILEPSG 114
           V V DI HFADG+AV+QVG+E FRIC+EL+DD+ILV K  ++ A+KDMFND R+ILEPSG
Sbjct: 334 VNVTDIGHFADGVAVQQVGEETFRICYELLDDVILVKKESISAAIKDMFNDGRNILEPSG 393

[Close]

BLAST of Sed0020495 vs. ExPASy TrEMBL
Match: A0A5D3C7Q3 (Threonine dehydratase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G00790 PE=3 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 5.9e-33
Identity = 77/127 (60.63%), Postives = 95/127 (74.80%), Query Frame = 0


Query: 1   MEIARKIRDKVHAIFVPVGSGS--------------QVLIFGVQLDEENSMAQALHFGEI 60
           MEI R++R K+HAI VP+G G               +V +FGV+ ++ENSMAQAL+  EI
Sbjct: 275 MEIGRQMRGKIHAIIVPIGGGGLAAGIVSFYKLVYPEVKVFGVEPNDENSMAQALYRDEI 334

Query: 61  VRVKDIDHFADGIAVKQVGDEAFRICWELVDDIILVNKHLVAVAMKDMFNDERSILEPSG 114
           V V DI HFADG+AV+QVGDE FRIC EL+DD+ILV K  ++ A+KDMF+DERSILEPSG
Sbjct: 335 VNVTDIGHFADGVAVQQVGDETFRICRELLDDVILVTKEEISAAIKDMFSDERSILEPSG 394

[Close]

BLAST of Sed0020495 vs. ExPASy TrEMBL
Match: A0A5A7SJ32 (Threonine dehydratase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G001640 PE=3 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 5.9e-33
Identity = 77/127 (60.63%), Postives = 95/127 (74.80%), Query Frame = 0


Query: 1   MEIARKIRDKVHAIFVPVGSGS--------------QVLIFGVQLDEENSMAQALHFGEI 60
           MEI R++R K+HAI VP+G G               +V +FGV+ ++ENSMAQAL+  EI
Sbjct: 275 MEIGRQMRGKIHAIIVPIGGGGLAAGIVSFYKLVYPEVKVFGVEPNDENSMAQALYRDEI 334

Query: 61  VRVKDIDHFADGIAVKQVGDEAFRICWELVDDIILVNKHLVAVAMKDMFNDERSILEPSG 114
           V V DI HFADG+AV+QVGDE FRIC EL+DD+ILV K  ++ A+KDMF+DERSILEPSG
Sbjct: 335 VNVTDIGHFADGVAVQQVGDETFRICRELLDDVILVTKEEISAAIKDMFSDERSILEPSG 394

[Close]

BLAST of Sed0020495 vs. TAIR 10
Match: AT3G10050.1 (L-O-methylthreonine resistant 1 )

HSP 1 Score: 110.2 bits (274), Expect = 1.3e-24
Identity = 56/127 (44.09%), Postives = 82/127 (64.57%), Query Frame = 0


Query: 1   MEIARKIRDKVHAIFVPVGSGS--------------QVLIFGVQLDEENSMAQALHFGEI 60
           MEI R+ +  +HAIFVPVG G               +V I GV+  + N+MA +LH GE 
Sbjct: 250 MEITRQAKGPLHAIFVPVGGGGLIAGIAAYVKRVSPEVKIIGVEPADANAMALSLHHGER 309

Query: 61  VRVKDIDHFADGIAVKQVGDEAFRICWELVDDIILVNKHLVAVAMKDMFNDERSILEPSG 114
           V +  +  FADG+AVK+VG+E FRI   L+D ++LV +  +  ++KDMF ++R+ILEP+G
Sbjct: 310 VILDQVGGFADGVAVKEVGEETFRISRNLMDGVVLVTRDAICASIKDMFEEKRNILEPAG 369

[Close]

BLAST of Sed0020495 vs. TAIR 10
Match: AT4G11640.1 (serine racemase )

HSP 1 Score: 46.6 bits (109), Expect = 1.8e-05
Identity = 35/133 (26.32%), Postives = 67/133 (50.38%), Query Frame = 0


Query: 1   MEIARKIRDKVHAIFVPVGSGSQVLIFGVQLDEE----------------NSMAQALHFG 60
           +E+  +I++ + AI VP+  G   LI GV L  +                +  AQ+   G
Sbjct: 168 LELLEQIQE-IDAIVVPISGGG--LISGVALAAKSIKPSIRIIAAEPKGADDAAQSKVAG 227

Query: 61  EIVRVKDIDHFADGIAVKQVGDEAFRICWELVDDIILVNKHLVAVAMKDMFNDERSILEP 118
           +I+ +   +  ADG+    +GD  + +  +LVDD++ + +  +  AMK  +   +  +EP
Sbjct: 228 KIITLPVTNTIADGLRA-SLGDLTWPVVRDLVDDVVTLEECEIIEAMKMCYEILKVSVEP 287

The following BLAST results are available for this feature:

BLAST of Sed0020495 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022977240.1	5.0e-34	61.42	threonine dehydratase biosynthetic, chloroplastic-like isoform X1 [Cucurbita max...	[more]
XP_022977241.1	5.0e-34	61.42	threonine dehydratase biosynthetic, chloroplastic-like isoform X2 [Cucurbita max...	[more]
KAG6604380.1	1.4e-33	60.63	Threonine dehydratase, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023543427.1	1.4e-33	60.63	threonine dehydratase biosynthetic, chloroplastic-like [Cucurbita pepo subsp. pe...	[more]
KAG7034531.1	1.4e-33	60.63	Threonine dehydratase biosynthetic, chloroplastic [Cucurbita argyrosperma subsp....	[more]

BLAST of Sed0020495 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0FKE6	5.7e-25	43.31	Threonine dehydratase 1 biosynthetic, chloroplastic OS=Solanum lycopersicum OX=4...	[more]
Q9ZSS6	1.8e-23	44.09	Threonine dehydratase biosynthetic, chloroplastic OS=Arabidopsis thaliana OX=370...	[more]
P53607	1.6e-22	41.73	L-threonine dehydratase biosynthetic IlvA OS=Burkholderia multivorans (strain AT...	[more]
Q9AXU4	5.9e-22	42.06	Threonine dehydratase OS=Nicotiana attenuata OX=49451 GN=TD PE=1 SV=1	[more]
O42615	9.4e-20	38.93	Threonine dehydratase, mitochondrial OS=Blastobotrys adeninivorans OX=409370 GN=...	[more]

BLAST of Sed0020495 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IJC6	2.4e-34	61.42	Threonine dehydratase OS=Cucurbita maxima OX=3661 GN=LOC111477609 PE=3 SV=1	[more]
A0A6J1ILR7	2.4e-34	61.42	Threonine dehydratase OS=Cucurbita maxima OX=3661 GN=LOC111477609 PE=3 SV=1	[more]
A0A6J1ECR5	2.0e-33	59.84	Threonine dehydratase OS=Cucurbita moschata OX=3662 GN=LOC111433136 PE=3 SV=1	[more]
A0A5D3C7Q3	5.9e-33	60.63	Threonine dehydratase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold20...	[more]
A0A5A7SJ32	5.9e-33	60.63	Threonine dehydratase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold54...	[more]

BLAST of Sed0020495 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10050.1	1.3e-24	44.09	L-O-methylthreonine resistant 1	[more]
AT4G11640.1	1.8e-05	26.32	serine racemase	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001926	Pyridoxal-phosphate dependent enzyme	PFAM	PF00291	PALP	coord: 10..114 e-value: 2.0E-13 score: 50.4
IPR036052	Tryptophan synthase beta subunit-like PLP-dependent enzyme	GENE3D	3.40.50.1100		coord: 20..117 e-value: 1.4E-23 score: 85.5
IPR036052	Tryptophan synthase beta subunit-like PLP-dependent enzyme	SUPERFAMILY	53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes	coord: 1..117
None	No IPR available	PANTHER	PTHR48078	THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATED	coord: 1..117
None	No IPR available	PANTHER	PTHR48078:SF11	THREONINE DEHYDRATASE, MITOCHONDRIAL	coord: 1..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0020495.1	Sed0020495.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009097	isoleucine biosynthetic process
biological_process	GO:0006567	threonine catabolic process
molecular_function	GO:0004794	L-threonine ammonia-lyase activity