Sed0020492 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGTGAAGACTTGTTCCTGATAGAGAGGCTTAATTTTGCGCGCATTGTGAGGCGCCCAGATTTCGAAATTCGTGTGTTCTTCTCTACTCTGGTTTTCATGGGGTCAATTGGAGCTCCGCTCTGTGTAGTAGTCGAAGAAGAAGAAGAAGAATGGGAGCTAGCAAGTGAAGATGGCTTTGTCTACAAACGGAAGAGGCGCCGCCTGGACCCGCCGGAAGCCATTGCAGCAACCTCTCCGGTGGATCCGGCGGCGGAGGAGAAGCGGCGACGAGAGCGTAGGAGGAAGACGTTGTTGAAGGTCAGGGCCAAGTACCGGGCAGAGATTCAACAGTGGGAGGTTTTGTCGAACAACTTGCGGGCGATGGAGGAGGCGACTCGGATGCTGCAACGACGGTTCCGCCGGGAAGGGGAAGAAGGAACGGCCTCGCTTATGGAGGCTTCACCGATCGTCAAGCTCTCGTGCGCGCCAATGGTGGACGATCTTCTCTCTCAGGTAAATCCATATTCGGTTTCGTCTTGAATTTGGGGGAAAATATGCAAGCCAAGTGAAATTTAGGGATTTCTGCGATTTGCTCGTAATTCATCATTTATTACTAGAACGAATTTTCAGTTCAGTTCAAATCGGATGAAATTGTGTCGATTTGATTATTTTATTTCTTGCTTAACAAATTCTGAGAAGAAAAAGGGTCCCTCTTCTGTGGTATATGAGGTTTGATTTGGAAAATCAATCCGAACCACCCACTATCAGCATCATATTATTTGATATAGAGGACATGAAATCGTCATTTTGGGTAAATGTTGTTCGAATTTCTCAATCACATAGCCCTTGGACTTTGAAGGTGCTTCCCTCGAGATCCTAAGATTTTGAGACTCACCTTGTGACATTAATTTGTAGACACCGATGCCTGAGATGGATTTGATTGCCCCGGATAAAGTGGAGCAAAGCTCCGATGTCCCGGTTTCAGAAAAAAAAAAAAATCTCAATCACATCATTTCAACACTCAGCCAACCAATATTTGTTCTGAACACTCCATCACTTTACTGAAATCCAGGTATGGATCAAGATGCTTGGAGATACCCTCTAATGGGTCCAAGCTTCGAATACGAACTTTTACTTTAGAACTTTTGTTATCTCCTAGATTTGGCCTTAGAGTAGCATTGTAAAATTAGGGCAATTTCTTGTTTTCTACAGCCTTCTTTGCCTCTGGCCACAGCACTGGTCAAATAGTAATAGTTTCTCGATTAGGGTATTCTGTATTAATAACAATACCCAGAGCCTTAACTTTGCAGGTGGAAGGTCAGGCTGCCATCATTGGCAATGTTTCAAAGCTTTGTGATATAGCTGAAGCATTGTGCAAGACAGAAGAGGATCGATTGACACAGTGTCTAATCGATCTTCCCATTTGGGCATCACCTCGCGAGCTCATGGCCTCGCTGTGTGAGGACGAGTAACAACTCAGGCAGTGAAGAGAAACAGGAGCTGGAGACCTTCCATTTTGTAAGATTTATTGTGTAAAAACTATTCTAAATGCTATGAAGTCACCAAACTGTAGCCTACTTGTGGAGACCACATTCTTTGTTACTTTAGATGGTGAACCCTTAAAGTTTGTGCCTATCCCTCATCACTCAGCATGCTCTTCTACATAGTATATTGTGGATATTGACAGAAATTTAGTGTTATCAATTTTATATAAATGTCGATAATGATTGTTCTAAATTTTGTGGTCTATTAGTAGACTTTCTTGTGCCTTTTTTC AAGTGAAGACTTGTTCCTGATAGAGAGGCTTAATTTTGCGCGCATTGTGAGGCGCCCAGATTTCGAAATTCGTGTGTTCTTCTCTACTCTGGTTTTCATGGGGTCAATTGGAGCTCCGCTCTGTGTAGTAGTCGAAGAAGAAGAAGAAGAATGGGAGCTAGCAAGTGAAGATGGCTTTGTCTACAAACGGAAGAGGCGCCGCCTGGACCCGCCGGAAGCCATTGCAGCAACCTCTCCGGTGGATCCGGCGGCGGAGGAGAAGCGGCGACGAGAGCGTAGGAGGAAGACGTTGTTGAAGGTCAGGGCCAAGTACCGGGCAGAGATTCAACAGTGGGAGGTTTTGTCGAACAACTTGCGGGCGATGGAGGAGGCGACTCGGATGCTGCAACGACGGTTCCGCCGGGAAGGGGAAGAAGGAACGGCCTCGCTTATGGAGGCTTCACCGATCGTCAAGCTCTCGTGCGCGCCAATGGTGGACGATCTTCTCTCTCAGAGCCTTAACTTTGCAGGTGGAAGGTCAGGCTGCCATCATTGGCAATGTTTCAAAGCTTTGTGATATAGCTGAAGCATTGTGCAAGACAGAAGAGGATCGATTGACACAGTGTCTAATCGATCTTCCCATTTGGGCATCACCTCGCGAGCTCATGGCCTCGCTGTGTGAGGACGAGTAACAACTCAGGCAGTGAAGAGAAACAGGAGCTGGAGACCTTCCATTTTGTAAGATTTATTGTGTAAAAACTATTCTAAATGCTATGAAGTCACCAAACTGTAGCCTACTTGTGGAGACCACATTCTTTGTTACTTTAGATGGTGAACCCTTAAAGTTTGTGCCTATCCCTCATCACTCAGCATGCTCTTCTACATAGTATATTGTGGATATTGACAGAAATTTAGTGTTATCAATTTTATATAAATGTCGATAATGATTGTTCTAAATTTTGTGGTCTATTAGTAGACTTTCTTGTGCCTTTTTTC ATGGGGTCAATTGGAGCTCCGCTCTGTGTAGTAGTCGAAGAAGAAGAAGAAGAATGGGAGCTAGCAAGTGAAGATGGCTTTGTCTACAAACGGAAGAGGCGCCGCCTGGACCCGCCGGAAGCCATTGCAGCAACCTCTCCGGTGGATCCGGCGGCGGAGGAGAAGCGGCGACGAGAGCGTAGGAGGAAGACGTTGTTGAAGGTCAGGGCCAAGTACCGGGCAGAGATTCAACAGTGGGAGGTTTTGTCGAACAACTTGCGGGCGATGGAGGAGGCGACTCGGATGCTGCAACGACGGTTCCGCCGGGAAGGGGAAGAAGGAACGGCCTCGCTTATGGAGGCTTCACCGATCGTCAAGCTCTCGTGCGCGCCAATGGTGGACGATCTTCTCTCTCAGAGCCTTAACTTTGCAGGTGGAAGGTCAGGCTGCCATCATTGGCAATGTTTCAAAGCTTTGTGA MGSIGAPLCVVVEEEEEEWELASEDGFVYKRKRRRLDPPEAIAATSPVDPAAEEKRRRERRRKTLLKVRAKYRAEIQQWEVLSNNLRAMEEATRMLQRRFRREGEEGTASLMEASPIVKLSCAPMVDDLLSQSLNFAGGRSGCHHWQCFKAL Homology
BLAST of Sed0020492 vs. NCBI nr
Match: XP_022989565.1 (uncharacterized protein LOC111486625 [Cucurbita maxima]) HSP 1 Score: 165.6 bits (418), Expect = 3.3e-37 Identity = 95/141 (67.38%), Postives = 110/141 (78.01%), Query Frame = 0
BLAST of Sed0020492 vs. NCBI nr
Match: XP_022928186.1 (uncharacterized protein LOC111435083 [Cucurbita moschata]) HSP 1 Score: 159.1 bits (401), Expect = 3.1e-35 Identity = 93/141 (65.96%), Postives = 107/141 (75.89%), Query Frame = 0
BLAST of Sed0020492 vs. NCBI nr
Match: KAG6588936.1 (hypothetical protein SDJN03_17501, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022706.1 hypothetical protein SDJN02_16440, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 158.3 bits (399), Expect = 5.2e-35 Identity = 92/141 (65.25%), Postives = 107/141 (75.89%), Query Frame = 0
BLAST of Sed0020492 vs. NCBI nr
Match: XP_023526083.1 (uncharacterized protein LOC111789675 [Cucurbita pepo subsp. pepo] >XP_023526084.1 uncharacterized protein LOC111789675 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 158.3 bits (399), Expect = 5.2e-35 Identity = 92/141 (65.25%), Postives = 107/141 (75.89%), Query Frame = 0
BLAST of Sed0020492 vs. NCBI nr
Match: XP_038904940.1 (uncharacterized protein LOC120091144 [Benincasa hispida]) HSP 1 Score: 157.9 bits (398), Expect = 6.8e-35 Identity = 91/141 (64.54%), Postives = 107/141 (75.89%), Query Frame = 0
BLAST of Sed0020492 vs. ExPASy TrEMBL
Match: A0A6J1JMQ6 (uncharacterized protein LOC111486625 OS=Cucurbita maxima OX=3661 GN=LOC111486625 PE=4 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 1.6e-37 Identity = 95/141 (67.38%), Postives = 110/141 (78.01%), Query Frame = 0
BLAST of Sed0020492 vs. ExPASy TrEMBL
Match: A0A6J1EJL6 (uncharacterized protein LOC111435083 OS=Cucurbita moschata OX=3662 GN=LOC111435083 PE=4 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 1.5e-35 Identity = 93/141 (65.96%), Postives = 107/141 (75.89%), Query Frame = 0
BLAST of Sed0020492 vs. ExPASy TrEMBL
Match: A0A6J1IZN1 (uncharacterized protein LOC111481397 OS=Cucurbita maxima OX=3661 GN=LOC111481397 PE=4 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 2.1e-34 Identity = 91/141 (64.54%), Postives = 106/141 (75.18%), Query Frame = 0
BLAST of Sed0020492 vs. ExPASy TrEMBL
Match: A0A6J1DE60 (uncharacterized protein LOC111019962 OS=Momordica charantia OX=3673 GN=LOC111019962 PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 2.8e-34 Identity = 91/141 (64.54%), Postives = 102/141 (72.34%), Query Frame = 0
BLAST of Sed0020492 vs. ExPASy TrEMBL
Match: A0A6J1F3L3 (uncharacterized protein LOC111442071 OS=Cucurbita moschata OX=3662 GN=LOC111442071 PE=4 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 6.3e-34 Identity = 90/141 (63.83%), Postives = 106/141 (75.18%), Query Frame = 0
BLAST of Sed0020492 vs. TAIR 10
Match: AT3G27520.1 (unknown protein; Has 28 Blast hits to 28 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 67.8 bits (164), Expect = 8.7e-12 Identity = 39/101 (38.61%), Postives = 59/101 (58.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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