Sed0020482 (gene) Chayote v1

Overview


Name	Sed0020482
Type	gene
Organism	Sechium edule (Chayote v1)
Description	type 2 DNA topoisomerase 6 subunit B-like isoform X1
Location	LG03: 43150886 .. 43156781 (-)
RNA-Seq Expression	Sed0020482
Synteny	Sed0020482

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTTATTTACATGAGCGCGGGAGTCAGTTTTAGTTTCAGTATTCTCTCAAAGCTTCAGCCATGGAGTTTGCTTCTCTTCAAGATCTCTGCTTACACGTAAGTTCAATCTCGCGAACCTTTTTTTTCTCAGATTCAAATCAGTAGAGTGATTCTTAAAGAAATCTCTTCTTGAATTTGGTAACGCAGCTAATTTCGTCGGCAATTCGGAGATGCATCTGCTCCGAACAACTCTGCAGACTCTCCGTTCTTCTGCAACGATCTTCCGATTCCGATCCTCCTCTAGTTTGTGTTTCTGGTGAGTGATCTCTCACCGCGTTTTCAATTTTGGTTTATCGAACATTTTGTCCAGCCCAGCCAGTTACGTTTGATTCAAAGAGTTTGAATGAAGCAAAATTACTATGAAAACTTTGAATTACAGTGATTTTCTTGAATTTTTAGTTTCAGATACCGGTATTGGAAGCTGCATAGAGGAGTTTCAGGATTTGAAGTGCTCCGTTGAAGGATTCCTTGCTGAAATGTGGGGTGCGTATTTGACTCTGATCCTCTAGTTTTCTGGAAGCATTTGTTAAATGATGACTAAAATGTTCTGATTAATACCTCTAGTAGCTCTACATTGTTTAGTTATCGTTCGAATTACTATTTTATTGATTTATTATAGTATGCATCTTAGATTGTTAGTAAATACACTTGTATTCGCCTAATGATAGTGAAGATCTTGGTTGTACAAACGATTCACTTGTATTTTCTCCTTAGTCAAATAAGCTAAGCTGAAGCTTTCTTCAAACGGCAAATTTGGCATCATCCTTTTGAAAATCTGCACTCAGCAAACCTTAGTACATCATATTTTCATTTTTTTTGAGGTATATATTAGTATATGTGGATTAGATTACCGTATCATTGTTCTTATGTGTATTAATTCATTTCTGGTATTTTATGCAGACGGACTCGTTTCTGTGAGAACTACCAGTAAGTTCCATCTTCTGAAAATTACATTAGTTTGAGTTAATAACCCGGGGAAGAACTTCATAAGATCTTCAACAATACCTCTTAGGAAGAATCAATAGCTGTATCCTACTAAGAAGCATGGACACAGACACGAGATACGGACACAATACGGACACGTAGACATGCTACTATTTAATAATGCAGGACACGGATACGTCGAGAACATGTGATTTATTATTATTTTTTATAATATACTATTAAAAGATGAAATCTAGAATATTTTAGTTTTTATCTCATTTTCCTTCCCTCCATTTTATTTTCTCTCTTTCTTTAATTCTTTCATTTTAGTCCATCTATCTTTGATAGACATCGTCGTCGTCGACCTCCACCAACACTATCCGTTATCGTGTCATTCGCTATTGGAAACAAATAAGTCTTAATTGAGGTTTCCATGAAGTGTCTATCGTGTGTACATGAAGTGTCTGAAATTGAAAATAATAATAATAAAAAAGGACACGAAATTTTGCATGTCGGGCACGTGTCTGACGAGTGTCCGAAAGTATCGGTGTCGGACACGAGTACGACACGGATGCATTGTCAAAATAGAAGTGTCCGTGCTTCATAGGTATCCTAGAGTTAGAGATCCATCCCTAATAATTCATCAACACTTTTACTCACTGTTTGCTGAATGTCTAGATAGCTTGCTATGTGCATAGCAACATATCAGTAGGATAAGTTAAGTGGGTACCGATGTTAAAAAAAAAGATGAACTCTTAATTGATGAAAATGAATTTTTCTATTGGCAATTTTCAAGCCTTTCTAGCATATTACGTTTTGGGTTGTTTTTCTCTATAAAGTTGTACTCTTTTTTTTTACAATCTTGTACCAATTGTACATATACTAACGTCCTGTAGAGATTACAGATATTTGTGACGATGAAATAACTTGCTATCAGTTGAATCTGAAAGAGAATGTCACTACCAGGAAGCCAATTAGGCTACCTTCAAACAATAAGCATGGTGTGAAATTCAGGCATGGAACCATTTTAACTTTTTTTGTTACTTTGTTTAGAACAGGAGGTAACTTGATTCTTTTTAATTTAATTAATTAGTGGAACAGAAGTGTGTTTGTCTGTTTCTGAAACTGTTGATGTTTTGCTGGCGGAGATCAACTGCTTCTTTCAGAAGGTCCAGTTCTCCTTTACTGCTGAATCTTTTACTAACTTTTGGAAAACATTTGGTTGGATCTGAACTATTTTGTTTGCAGTATACAACTTTTTACTGCTTATAAACAATGTTCGTTTGTTATGTTATAAAGAAAACGATGTTCATTAGTTGTGTTATCAACTACAAAATAATCCTGTGATGTTATAAAGAAAACGATGTTCATTAGTTGTGTTATCAACTACAAAATAACGGTATAGTTGGTTCAAAATATTTCATTCAATCACATATTTTCTTTTCATTCTCCCCTTCGCTGCAATACTAAGGTTTTAGTTGCTGTTTATCAAATGAATGTCAATATGCACAGTGCTTCCATGTGCGGGACTGACCAGTTAAGCTGCAATTAGCTAGATTGCCTCTTTATAGAAAACAAAATGAATTAATCCTGTGATGAAATATCAAGTTTGGATTGCAGGGTAATTGTAGACTGCTGCTCTTGTCTTGCACCCTTCCAATTAATGTCTGTAACTTTGACTATTAGCCAAACCACTTTGAAGGCTAGGCTTGACCCATAGTTTCTTAAGGAGGATTGTGAGGGCATTTGTATTCAGTTAATTCATAGTCAGGGCTATCGTGTACCTTCTGTCAAACAAAAAATGGAATGAATTATTTGTTTATCTGTCTAACTTTCTTGTAAGCATTAAAAACGGTAGGATGGGTTCGATGAGATAGAAAGTAAAAGTGAGTGAAGCTTTGATTAAAAAGATAGTCTTCACTCTTTAAAGTTGGTTAATGGAAGTTTAGGAGGGTTTTATGGTACTCTTCTGTATTCTTGAAACATGCTATGTAGTCTTTGACTCTCATTGACTGATAAAATTTCAAGAGACCGTAGTACGAATATTGGTTTATCATTAACTAGATTGTGTGAACCTGATCAGCAGTTAGTGTTGATCTTTTGAAAGGTCATACAGAGAAAAATATACATTTTCTGATGGCATCTCCCGTCATTGTGGTAGAATTTGAAGTTTAATCATTGAATTCTCAAGTTTTATCATTTCTTATACTAGTGATGTTGAACAGCCTTTAGTATCATCTCATATCAACCCCTTTTAGCATCTCAAATCAATTCTTTCTTATTGAATTATAATCACGTACTTACCTTAAGTTTATCCTGCTTTATTTTGCAGATTATCATCCTAAAGATCCCAGTAAGTTGAACTCGCTGCTCTGTTCACATTTCAAAAATTATATGCTGAAAAAAAAAATCAGTGGATCTCTGCAAAAGAACTGCATTTTATTGTCCTCTTTATCTGACTTTTGACCTACGTATATCTAAAAATGGCTGATTTTGTCAACATTATGATAGGTTTAGGCCTTAGGAGTATTAAGAATATATTAGGGGCATGTGTGCAATTAGTTAGAGAGTTAGTTGCATATTATGGTTATAAATAGAGAGGGATAGTTGGTAGTGGGGGATCAAAGTATTCATAGAATGGTTTAGGGCTTGAAATGGTTCTCAAGATGGAGAGGTCCAAGTTTTTTTTTTTTTTTTTTTTTTTCTGAAACAAGGGTAACCACGCCCATTCTTAGGTCAGGCACCGGGAGACGATGGAGAGGTCCAAGTACCTCTAAAGCTTGGTGGTTACCTTGTATTTCTTTATCTTTTGTTATCAATAGTAGTTGGATCCTATTGCCTTATATCTCTCATTATGTTATATACTTAGTCATGCATGACTTGGCAAGGTTATCATATTAGGAATTACAGATAAATTTATCGTGTACAAGAAATATGCATCTAAAAACCTCAACTTTGGACAAGAAAAGTCTACATGAATAGAAGATATATTGCAAATTACCTTACCTTTGGCGATGGTTTAGCGCTAAAGAAACTCATAAGCTTTTCCATTTCACAAGAATATTGCAATGGAAGTTGTAGCCGACGGCCAGGATATTCCAGGGTCACGTGGTAATGCCGTCATCCCGGAAAACTTGTCCTCAAGCTCCTCTTTTGCAGCCTCAACTCTGGATCATTTGAAATTGGGCTTTGAGGATTATGTATTGAAGCATGGATCCAGCTTCATATGTGATTCTTGTTTCCCTAACAGGTGAGTTTGCCACCTTAATTTACACCAACTTGTTGTTTGACTTAAGTTGCTGGTTTTAGGTTATGAAGTGAATAACTTTTCCTGATAAAATATGAAGAAACCTTGATGTGTATATAATTTTTCCTATCGTATGATGTGCATATAAATTTTCTTCTACATCCAATTTCGAGCTTTAGGAATAATCTAAGGAGTGGGGGTGGAATGATTTGTGAAGACAAGCACAAAACCAGCAAACTGGTAGTGGAGGCAGCAATTGTGATTAGTGAAATATCAAATCCGATAAATAATTGCTTTGGAGCACGAAGCTCGGATACAGAGGTTGTTTGACCTATTGCATCCCTCTTCCTGTTTTTTTTCTTTAATATGTGAGGTAAGAGAATCGAAACTCTAACCTCAAGATTAAAGGTTTGCTCATAACTGGTTGTCTGATTTATTTTTTATTTTTCGAGAAAATGGTTGTCTTTTTTTATGATCACAACTTCGGTGTAACTAAGATAACTGCACGGTGATTACACAGGTTTTTTATTTTAAGGATTTTGCACCTTGCTCAATCTCTGAGCCAGTTGTTAAGGCATTAACAGGCATTGAGTGGAAAGGTTATGGATTGACCTTGGAATGTGCTATCAATAAAACAAGCCATGCATTATTGAAGTGGGAACACTCGCCCCAATCTTTTCATGTTCATATTGTTGTCCACTGCTATCATAAGGTATGACATTCATTAAATCTCATGGTAAAAGTTAATAATGAATGTTTATTTTGATCTTTATTTTTAAGGTGTGTAAAGTTCGTTTTCTGCCTTAGCTTGTGGCCAATGCCATGCCATTGGTGCAGAGGACTCCGGTTGATCAAAAACTCATAAGAAAAGCAGTTAAACTTGCACTGGATGACGTCAAGAAAAAACATGCAGGATTTCTTCTCAGTGCAAATACCCTCAAGGTAGATCTCTATTTCACTGTCTCGTGTGCACTGACTAAATTAATCATTAACGGAACATTTTTCAATTTTAAAAGTAGAAGTTCTTTTGTGGAAAAGAATCATAATATTTTCCAACTTTTCATTATCTTGGAAATGCAAGCAATATGATATGTTTTCTTTTGCATGTGTAATTGTTTGCTGCTATTAAATTTAACTTTCTCCAAAATTTCAACATGGCATTTTCTAATCCGTTTTTTATTTAAAAATAAAATTGGTATTTTGCACATTAATTTTGTTTAGTCAATTATATTCTCTTAATGACATGGTAATCGGCCTAGAGATGGACGTGGTTACCCTTTTTTCAAAAAGATATGGTAATCCATATAATTAGAACGGTGCTTGCTTTTCTAATAATGTGCAGCCTCATAAACTTGGTTTCATGTTATCTTCAGATCAGTAGCTTTGGCTTGGATCTTGCCAAAGCTATCGCTGGCCTAGTTTTATACTCTAATGACTTGGATTTTAAAGAAGAATGTCTTGCAATTCTTGGCTTGCAACCTCAACAATCAGAAGATGAAATTGTTGAAGAAAATATTAAGAAAATGATCATTTCAACGATAGAGGCAAATGACCTTAGGCCACAAGGAACCAAAGATGTTGGCCCTCTTCTATTTGAAGATGGTCGCCACAAATTACAGTTTGTGGAGGATGACTGTGATGAAGATGGTTTTGATCCAATGGACTGTTCTGGCGTCTTATATTGA

mRNA sequence

GTTTTATTTACATGAGCGCGGGAGTCAGTTTTAGTTTCAGTATTCTCTCAAAGCTTCAGCCATGGAGTTTGCTTCTCTTCAAGATCTCTGCTTACACCTAATTTCGTCGGCAATTCGGAGATGCATCTGCTCCGAACAACTCTGCAGACTCTCCGTTCTTCTGCAACGATCTTCCGATTCCGATCCTCCTCTAGTTTGTGTTTCTGTTTCAGATACCGGTATTGGAAGCTGCATAGAGGAGTTTCAGGATTTGAAGTGCTCCGTTGAAGGATTCCTTGCTGAAATGTGGGACGGACTCGTTTCTGTGAGAACTACCAATATTTGTGACGATGAAATAACTTGCTATCAGTTGAATCTGAAAGAGAATGTCACTACCAGGAAGCCAATTAGGCTACCTTCAAACAATAAGCATGGTGTGAAATTCAGTGGAACAGAAGTGTGTTTGTCTGTTTCTGAAACTGTTGATGTTTTGCTGGCGGAGATCAACTGCTTCTTTCAGAAGATTATCATCCTAAAGATCCCAAATATTGCAATGGAAGTTGTAGCCGACGGCCAGGATATTCCAGGGTCACGTGGTAATGCCGTCATCCCGGAAAACTTGTCCTCAAGCTCCTCTTTTGCAGCCTCAACTCTGGATCATTTGAAATTGGGCTTTGAGGATTATGTATTGAAGCATGGATCCAGCTTCATATGTGATTCTTGTTTCCCTAACAGGAATAATCTAAGGAGTGGGGGTGGAATGATTTGTGAAGACAAGCACAAAACCAGCAAACTGGTAGTGGAGGCAGCAATTGTGATTAGTGAAATATCAAATCCGATAAATAATTGCTTTGGAGCACGAAGCTCGGATACAGAGGTTTTTTATTTTAAGGATTTTGCACCTTGCTCAATCTCTGAGCCAGTTGTTAAGGCATTAACAGGCATTGAGTGGAAAGGTTATGGATTGACCTTGGAATGTGCTATCAATAAAACAAGCCATGCATTATTGAAGTGGGAACACTCGCCCCAATCTTTTCATGTTCATATTGTTGTCCACTGCTATCATAAGCTTGTGGCCAATGCCATGCCATTGGTGCAGAGGACTCCGGTTGATCAAAAACTCATAAGAAAAGCAGTTAAACTTGCACTGGATGACGTCAAGAAAAAACATGCAGGATTTCTTCTCAGTGCAAATACCCTCAAGATCAGTAGCTTTGGCTTGGATCTTGCCAAAGCTATCGCTGGCCTAGTTTTATACTCTAATGACTTGGATTTTAAAGAAGAATGTCTTGCAATTCTTGGCTTGCAACCTCAACAATCAGAAGATGAAATTGTTGAAGAAAATATTAAGAAAATGATCATTTCAACGATAGAGGCAAATGACCTTAGGCCACAAGGAACCAAAGATGTTGGCCCTCTTCTATTTGAAGATGGTCGCCACAAATTACAGTTTGTGGAGGATGACTGTGATGAAGATGGTTTTGATCCAATGGACTGTTCTGGCGTCTTATATTGA

Coding sequence (CDS)

ATGGAGTTTGCTTCTCTTCAAGATCTCTGCTTACACCTAATTTCGTCGGCAATTCGGAGATGCATCTGCTCCGAACAACTCTGCAGACTCTCCGTTCTTCTGCAACGATCTTCCGATTCCGATCCTCCTCTAGTTTGTGTTTCTGTTTCAGATACCGGTATTGGAAGCTGCATAGAGGAGTTTCAGGATTTGAAGTGCTCCGTTGAAGGATTCCTTGCTGAAATGTGGGACGGACTCGTTTCTGTGAGAACTACCAATATTTGTGACGATGAAATAACTTGCTATCAGTTGAATCTGAAAGAGAATGTCACTACCAGGAAGCCAATTAGGCTACCTTCAAACAATAAGCATGGTGTGAAATTCAGTGGAACAGAAGTGTGTTTGTCTGTTTCTGAAACTGTTGATGTTTTGCTGGCGGAGATCAACTGCTTCTTTCAGAAGATTATCATCCTAAAGATCCCAAATATTGCAATGGAAGTTGTAGCCGACGGCCAGGATATTCCAGGGTCACGTGGTAATGCCGTCATCCCGGAAAACTTGTCCTCAAGCTCCTCTTTTGCAGCCTCAACTCTGGATCATTTGAAATTGGGCTTTGAGGATTATGTATTGAAGCATGGATCCAGCTTCATATGTGATTCTTGTTTCCCTAACAGGAATAATCTAAGGAGTGGGGGTGGAATGATTTGTGAAGACAAGCACAAAACCAGCAAACTGGTAGTGGAGGCAGCAATTGTGATTAGTGAAATATCAAATCCGATAAATAATTGCTTTGGAGCACGAAGCTCGGATACAGAGGTTTTTTATTTTAAGGATTTTGCACCTTGCTCAATCTCTGAGCCAGTTGTTAAGGCATTAACAGGCATTGAGTGGAAAGGTTATGGATTGACCTTGGAATGTGCTATCAATAAAACAAGCCATGCATTATTGAAGTGGGAACACTCGCCCCAATCTTTTCATGTTCATATTGTTGTCCACTGCTATCATAAGCTTGTGGCCAATGCCATGCCATTGGTGCAGAGGACTCCGGTTGATCAAAAACTCATAAGAAAAGCAGTTAAACTTGCACTGGATGACGTCAAGAAAAAACATGCAGGATTTCTTCTCAGTGCAAATACCCTCAAGATCAGTAGCTTTGGCTTGGATCTTGCCAAAGCTATCGCTGGCCTAGTTTTATACTCTAATGACTTGGATTTTAAAGAAGAATGTCTTGCAATTCTTGGCTTGCAACCTCAACAATCAGAAGATGAAATTGTTGAAGAAAATATTAAGAAAATGATCATTTCAACGATAGAGGCAAATGACCTTAGGCCACAAGGAACCAAAGATGTTGGCCCTCTTCTATTTGAAGATGGTCGCCACAAATTACAGTTTGTGGAGGATGACTGTGATGAAGATGGTTTTGATCCAATGGACTGTTCTGGCGTCTTATATTGA

Protein sequence

MEFASLQDLCLHLISSAIRRCICSEQLCRLSVLLQRSSDSDPPLVCVSVSDTGIGSCIEEFQDLKCSVEGFLAEMWDGLVSVRTTNICDDEITCYQLNLKENVTTRKPIRLPSNNKHGVKFSGTEVCLSVSETVDVLLAEINCFFQKIIILKIPNIAMEVVADGQDIPGSRGNAVIPENLSSSSSFAASTLDHLKLGFEDYVLKHGSSFICDSCFPNRNNLRSGGGMICEDKHKTSKLVVEAAIVISEISNPINNCFGARSSDTEVFYFKDFAPCSISEPVVKALTGIEWKGYGLTLECAINKTSHALLKWEHSPQSFHVHIVVHCYHKLVANAMPLVQRTPVDQKLIRKAVKLALDDVKKKHAGFLLSANTLKISSFGLDLAKAIAGLVLYSNDLDFKEECLAILGLQPQQSEDEIVEENIKKMIISTIEANDLRPQGTKDVGPLLFEDGRHKLQFVEDDCDEDGFDPMDCSGVLY

Homology

[Close]

BLAST of Sed0020482 vs. NCBI nr
Match: XP_023545219.1 (type 2 DNA topoisomerase 6 subunit B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 759.2 bits (1959), Expect = 2.1e-215
Identity = 376/471 (79.83%), Postives = 417/471 (88.54%), Query Frame = 0


Query: 1   MEFASLQDLCLHLISSAIRRCICSEQLCRLSVLLQRSSDSDPPLVCVSVSDTGIGSCIEE 60
           MEFASLQDLCL LISSAIRRCICSE+LCRLSVLLQRS  SDPPLV +S+SDTG+GSCIEE
Sbjct: 1   MEFASLQDLCLLLISSAIRRCICSERLCRLSVLLQRSPASDPPLVRISISDTGLGSCIEE 60

Query: 61  FQDLKCSVEGFLAEMWDGLVSVRTTNICDDEITCYQLNLKENVTTRKPIRLPSNNKHGVK 120
           FQ+LKC VEG LAE W+G+V VRTTNICD EI+CY+LNLKENVTTRKPI LPSN KHGVK
Sbjct: 61  FQNLKCPVEGILAETWNGIVYVRTTNICDKEISCYELNLKENVTTRKPILLPSNIKHGVK 120

Query: 121 FSGTEVCLSVSETVDVLLAEINCFFQKIIILKIPNIAMEVVADGQDIPGSRGNAVIPENL 180
           FSGTEVCLSVSE+VDVLL E NCFFQKI++LK+PNIAMEV+ADGQD+PGSR +AV  E +
Sbjct: 121 FSGTEVCLSVSESVDVLLEEFNCFFQKILVLKVPNIAMEVMADGQDVPGSRNDAVFLEKI 180

Query: 181 SSSSSFAASTLDHLKLGFEDYVLKHGSSFICDSCFPNRNNLRSGGGMICEDKHKTSKLVV 240
           S+SSSFAASTLDHLKLG E YVL+HGSS  CDSCFPNR+NLRSGGGM+CEDKHKT+KLVV
Sbjct: 181 STSSSFAASTLDHLKLGLESYVLRHGSSLACDSCFPNRDNLRSGGGMVCEDKHKTTKLVV 240

Query: 241 EAAIVISEISNPINNCFGARSSDTEVFYFKDFAPCSISEPVVKALTGIEWKGYGLTLECA 300
           EAA+V SEISNP NNCFGA  SDT+V  FKDFAPCSISE ++KALTGI+WK YGL LECA
Sbjct: 241 EAAVVTSEISNPTNNCFGAGCSDTKVLCFKDFAPCSISEALLKALTGIDWKRYGLALECA 300

Query: 301 INKTSHALLKWEHSPQSFHVHIVVHCYHKLVANAMPLVQRTPVDQKLIRKAVKLALDDVK 360
           I++ SHALLKWEH P SFH+HIVVHCY KLV  AMPL+Q+T  D+KLIRKAVKLALDD K
Sbjct: 301 IDQRSHALLKWEHMPLSFHIHIVVHCYDKLVFEAMPLLQKTRFDKKLIRKAVKLALDDFK 360

Query: 361 KKHAGFLLSANTLKISSFGLDLAKAIAGLVLYSNDLDFKEECLAILGLQPQQSEDEIVEE 420
            KHAG LLSA+TLKIS F  DLAK+IAGLVLYS+D+DFKEECLAILGLQP QSE EIV E
Sbjct: 361 NKHAGVLLSADTLKISKFAPDLAKSIAGLVLYSSDMDFKEECLAILGLQPHQSEGEIVGE 420

Query: 421 NIKKMIISTIEANDLRPQGTKDVGPLLFEDGRHKLQFVEDDCDEDGFDPMD 472
           NIKK IIS IE ND R QGTK+V PLLFE GRH+LQFV+D+CDEDGFDPMD
Sbjct: 421 NIKKKIISAIEVNDRRQQGTKEVAPLLFE-GRHELQFVDDECDEDGFDPMD 470

[Close]

BLAST of Sed0020482 vs. NCBI nr
Match: XP_022962327.1 (type 2 DNA topoisomerase 6 subunit B-like isoform X6 [Cucurbita moschata])

HSP 1 Score: 751.1 bits (1938), Expect = 5.7e-213
Identity = 372/471 (78.98%), Postives = 413/471 (87.69%), Query Frame = 0


Query: 1   MEFASLQDLCLHLISSAIRRCICSEQLCRLSVLLQRSSDSDPPLVCVSVSDTGIGSCIEE 60
           MEFASLQDLCL LIS AIRRCICSE+LCRLSVLLQRS  SDPPLV +S+SDTG+GSCIEE
Sbjct: 1   MEFASLQDLCLLLISLAIRRCICSERLCRLSVLLQRSPASDPPLVRISISDTGLGSCIEE 60

Query: 61  FQDLKCSVEGFLAEMWDGLVSVRTTNICDDEITCYQLNLKENVTTRKPIRLPSNNKHGVK 120
           FQ+LKC VEG LAE W+G+V VRTTNICD EI+CY+LNLKENVTTRKPI LPSN KHGVK
Sbjct: 61  FQNLKCPVEGILAETWNGIVYVRTTNICDKEISCYELNLKENVTTRKPILLPSNIKHGVK 120

Query: 121 FSGTEVCLSVSETVDVLLAEINCFFQKIIILKIPNIAMEVVADGQDIPGSRGNAVIPENL 180
           FSGTEVCLSVSE+VDVLL E NCFFQKI++LK+PNIAMEV+ADGQD+PGSR +AV  E  
Sbjct: 121 FSGTEVCLSVSESVDVLLEEFNCFFQKILVLKVPNIAMEVMADGQDVPGSRNDAVFLEKF 180

Query: 181 SSSSSFAASTLDHLKLGFEDYVLKHGSSFICDSCFPNRNNLRSGGGMICEDKHKTSKLVV 240
           S SSSFAASTLDHLKLG E YVL+HGSS  CDSCFPNR+NLRSGGGM+CEDKHKT+KLVV
Sbjct: 181 SPSSSFAASTLDHLKLGLESYVLRHGSSLACDSCFPNRDNLRSGGGMVCEDKHKTTKLVV 240

Query: 241 EAAIVISEISNPINNCFGARSSDTEVFYFKDFAPCSISEPVVKALTGIEWKGYGLTLECA 300
           EAA+V SEI NP NNCFGA  SDT+V  FKDFAPCSISE ++KALTGI+WK YGL LECA
Sbjct: 241 EAAVVTSEIPNPTNNCFGAGCSDTKVLCFKDFAPCSISEALLKALTGIDWKRYGLALECA 300

Query: 301 INKTSHALLKWEHSPQSFHVHIVVHCYHKLVANAMPLVQRTPVDQKLIRKAVKLALDDVK 360
           I++ SHALLKWEH P SFH+HIVVHCY KLV  AMPL+Q+T  D+KLIRKAVKLALDD K
Sbjct: 301 IDQRSHALLKWEHMPLSFHIHIVVHCYDKLVFEAMPLLQKTRFDKKLIRKAVKLALDDFK 360

Query: 361 KKHAGFLLSANTLKISSFGLDLAKAIAGLVLYSNDLDFKEECLAILGLQPQQSEDEIVEE 420
            KHAG LLSA+TLKIS F  DLAK+IAGLVLYS+D+DFKEECLAILGLQP QSE EIV E
Sbjct: 361 NKHAGVLLSADTLKISKFAPDLAKSIAGLVLYSSDMDFKEECLAILGLQPHQSEGEIVGE 420

Query: 421 NIKKMIISTIEANDLRPQGTKDVGPLLFEDGRHKLQFVEDDCDEDGFDPMD 472
           NIKK IIS IE ND R QGT++V PLLFE GRH+LQ+V+D+CDEDGFDPMD
Sbjct: 421 NIKKKIISAIEVNDRRQQGTREVAPLLFE-GRHELQYVDDECDEDGFDPMD 470

[Close]

BLAST of Sed0020482 vs. NCBI nr
Match: XP_022131879.1 (type 2 DNA topoisomerase 6 subunit B-like isoform X1 [Momordica charantia])

HSP 1 Score: 748.8 bits (1932), Expect = 2.8e-212
Identity = 374/471 (79.41%), Postives = 411/471 (87.26%), Query Frame = 0


Query: 1   MEFASLQDLCLHLISSAIRRCICSEQLCRLSVLLQRSSDSDPPLVCVSVSDTGIGSCIEE 60
           MEF SLQDL L LISSAIRRCICSE+LCRLSVLLQRS+ SDPPLVC+S+SDTG+GSC+EE
Sbjct: 1   MEFNSLQDLFLLLISSAIRRCICSERLCRLSVLLQRSAASDPPLVCISISDTGLGSCLEE 60

Query: 61  FQDLKCSVEGFLAEMWDGLVSVRTTNICDDEITCYQLNLKENVTTRKPIRLPSNNKHGVK 120
           FQD KC VEG LAE WDG+VS+RTTN CD+EI+CYQLNLKENVT R+PI LPSN KHGVK
Sbjct: 61  FQDFKCPVEGILAEQWDGIVSLRTTNFCDNEISCYQLNLKENVTIREPIWLPSNVKHGVK 120

Query: 121 FSGTEVCLSVSETVDVLLAEINCFFQKIIILKIPNIAMEVVADGQDIPGSRGNAVIPENL 180
           FSGTEV LSVSE VDVLLAEINCFFQKI ILKIPN+AMEVV + QDIPGSR +AV  ENL
Sbjct: 121 FSGTEVRLSVSEAVDVLLAEINCFFQKIRILKIPNVAMEVVVECQDIPGSRNDAVFLENL 180

Query: 181 SSSSSFAASTLDHLKLGFEDYVLKHGSSFICDSCFPNRNNLRSGGGMICEDKHKTSKLVV 240
           SSSSSF ASTLDHLKLG EDYV +HGSS  CDSCFPNR+NL+SGGGMICE+K KT+ L V
Sbjct: 181 SSSSSFTASTLDHLKLGLEDYVSRHGSSLTCDSCFPNRDNLKSGGGMICEEKRKTTTLAV 240

Query: 241 EAAIVISEISNPINNCFGARSSDTEVFYFKDFAPCSISEPVVKALTGIEWKGYGLTLECA 300
           EAAIVISE+SNP  NC GAR SDTEVF FKDFAPCSISE  +KAL GI+WK YGL+LE A
Sbjct: 241 EAAIVISELSNPTTNCLGARFSDTEVFCFKDFAPCSISEAFLKALRGIDWKRYGLSLESA 300

Query: 301 INKTSHALLKWEHSPQSFHVHIVVHCYHKLVANAMPLVQRTPVDQKLIRKAVKLALDDVK 360
            N+ SHALLKWEH P SFH+HIVVHCY KLVA  MPLVQ+T  D+KLI KAVKLALDD+K
Sbjct: 301 TNQRSHALLKWEHVPLSFHIHIVVHCYQKLVAEVMPLVQKTQFDKKLISKAVKLALDDLK 360

Query: 361 KKHAGFLLSANTLKISSFGLDLAKAIAGLVLYSNDLDFKEECLAILGLQPQQSEDEIVEE 420
            K+AGFLLSANTLKIS F  DLAK IAGLVLYSNDLDF+EECLAILGLQPQQSE EIVEE
Sbjct: 361 NKYAGFLLSANTLKISRFAPDLAKTIAGLVLYSNDLDFQEECLAILGLQPQQSEGEIVEE 420

Query: 421 NIKKMIISTIEANDLRPQGTKDVGPLLFEDGRHKLQFVEDDCDEDGFDPMD 472
           NIK+ IIS IE ND RP+GTK+V PLLF DGRH+LQFV+D+CDEDGFDPM+
Sbjct: 421 NIKERIISVIEVNDGRPKGTKEVAPLLFGDGRHQLQFVDDECDEDGFDPME 471

[Close]

BLAST of Sed0020482 vs. NCBI nr
Match: XP_022996890.1 (type 2 DNA topoisomerase 6 subunit B-like isoform X5 [Cucurbita maxima])

HSP 1 Score: 743.8 bits (1919), Expect = 9.2e-211
Identity = 369/471 (78.34%), Postives = 410/471 (87.05%), Query Frame = 0


Query: 1   MEFASLQDLCLHLISSAIRRCICSEQLCRLSVLLQRSSDSDPPLVCVSVSDTGIGSCIEE 60
           MEFASLQDLCL LISSAIRRCICSE+LCRLSVLLQRS  SDPPLV +S+SDTG+GSCIEE
Sbjct: 1   MEFASLQDLCLLLISSAIRRCICSERLCRLSVLLQRSPASDPPLVRISISDTGLGSCIEE 60

Query: 61  FQDLKCSVEGFLAEMWDGLVSVRTTNICDDEITCYQLNLKENVTTRKPIRLPSNNKHGVK 120
           FQ+LKC VEG LAE W+G+V VRTTNICD EI+CYQLNLKENVTTRKPI LPSN KHGVK
Sbjct: 61  FQNLKCPVEGILAETWNGIVYVRTTNICDKEISCYQLNLKENVTTRKPILLPSNIKHGVK 120

Query: 121 FSGTEVCLSVSETVDVLLAEINCFFQKIIILKIPNIAMEVVADGQDIPGSRGNAVIPENL 180
           FSGTEVCLSVSE++DVLL E NCFFQKI++LK+PNIAMEV+ADGQD+PGSR +AV  E  
Sbjct: 121 FSGTEVCLSVSESIDVLLEEFNCFFQKILVLKVPNIAMEVMADGQDVPGSRNDAVFLEKF 180

Query: 181 SSSSSFAASTLDHLKLGFEDYVLKHGSSFICDSCFPNRNNLRSGGGMICEDKHKTSKLVV 240
           S SSSFAASTLDHLK G E YVL+HGSS  CDSCFPNR+NLRSGGGM+CEDKHKT+KLVV
Sbjct: 181 SPSSSFAASTLDHLKFGLESYVLRHGSSLACDSCFPNRDNLRSGGGMVCEDKHKTTKLVV 240

Query: 241 EAAIVISEISNPINNCFGARSSDTEVFYFKDFAPCSISEPVVKALTGIEWKGYGLTLECA 300
           EAA+V +EISNP NNCF A  S+T+V  FKDFAPCSISE ++KALTGI+WK YGL LECA
Sbjct: 241 EAAVVTTEISNPTNNCFRAGCSNTKVLCFKDFAPCSISEALLKALTGIDWKRYGLALECA 300

Query: 301 INKTSHALLKWEHSPQSFHVHIVVHCYHKLVANAMPLVQRTPVDQKLIRKAVKLALDDVK 360
           I++ SHALLKWEH P SFH+HIVVHCY K V  AMPL+Q+T  D+KLIRKAVKLALDD K
Sbjct: 301 IDQRSHALLKWEHMPLSFHIHIVVHCYDKHVFEAMPLLQKTRFDKKLIRKAVKLALDDFK 360

Query: 361 KKHAGFLLSANTLKISSFGLDLAKAIAGLVLYSNDLDFKEECLAILGLQPQQSEDEIVEE 420
            KHAG LLSA+TLKIS F  DLAK+IAGLVLYS+D+DFKEECLAILGLQP QSE EIV E
Sbjct: 361 NKHAGVLLSADTLKISKFAPDLAKSIAGLVLYSSDMDFKEECLAILGLQPHQSEGEIVGE 420

Query: 421 NIKKMIISTIEANDLRPQGTKDVGPLLFEDGRHKLQFVEDDCDEDGFDPMD 472
           NIK  IIS IE ND R QGTK+V PLLFE GRH+LQFV+D+CDEDG DPMD
Sbjct: 421 NIKNKIISAIEVNDRRQQGTKEVAPLLFE-GRHELQFVDDECDEDGLDPMD 470

[Close]

BLAST of Sed0020482 vs. NCBI nr
Match: XP_022131880.1 (type 2 DNA topoisomerase 6 subunit B-like isoform X2 [Momordica charantia])

HSP 1 Score: 739.6 bits (1908), Expect = 1.7e-209
Identity = 372/471 (78.98%), Postives = 409/471 (86.84%), Query Frame = 0


Query: 1   MEFASLQDLCLHLISSAIRRCICSEQLCRLSVLLQRSSDSDPPLVCVSVSDTGIGSCIEE 60
           MEF SLQDL L LISSAIRRCICSE+LCRLSVLLQRS+ SDPPLVC  +S+TG+GSC+EE
Sbjct: 1   MEFNSLQDLFLLLISSAIRRCICSERLCRLSVLLQRSAASDPPLVC--ISNTGLGSCLEE 60

Query: 61  FQDLKCSVEGFLAEMWDGLVSVRTTNICDDEITCYQLNLKENVTTRKPIRLPSNNKHGVK 120
           FQD KC VEG LAE WDG+VS+RTTN CD+EI+CYQLNLKENVT R+PI LPSN KHGVK
Sbjct: 61  FQDFKCPVEGILAEQWDGIVSLRTTNFCDNEISCYQLNLKENVTIREPIWLPSNVKHGVK 120

Query: 121 FSGTEVCLSVSETVDVLLAEINCFFQKIIILKIPNIAMEVVADGQDIPGSRGNAVIPENL 180
           FSGTEV LSVSE VDVLLAEINCFFQKI ILKIPN+AMEVV + QDIPGSR +AV  ENL
Sbjct: 121 FSGTEVRLSVSEAVDVLLAEINCFFQKIRILKIPNVAMEVVVECQDIPGSRNDAVFLENL 180

Query: 181 SSSSSFAASTLDHLKLGFEDYVLKHGSSFICDSCFPNRNNLRSGGGMICEDKHKTSKLVV 240
           SSSSSF ASTLDHLKLG EDYV +HGSS  CDSCFPNR+NL+SGGGMICE+K KT+ L V
Sbjct: 181 SSSSSFTASTLDHLKLGLEDYVSRHGSSLTCDSCFPNRDNLKSGGGMICEEKRKTTTLAV 240

Query: 241 EAAIVISEISNPINNCFGARSSDTEVFYFKDFAPCSISEPVVKALTGIEWKGYGLTLECA 300
           EAAIVISE+SNP  NC GAR SDTEVF FKDFAPCSISE  +KAL GI+WK YGL+LE A
Sbjct: 241 EAAIVISELSNPTTNCLGARFSDTEVFCFKDFAPCSISEAFLKALRGIDWKRYGLSLESA 300

Query: 301 INKTSHALLKWEHSPQSFHVHIVVHCYHKLVANAMPLVQRTPVDQKLIRKAVKLALDDVK 360
            N+ SHALLKWEH P SFH+HIVVHCY KLVA  MPLVQ+T  D+KLI KAVKLALDD+K
Sbjct: 301 TNQRSHALLKWEHVPLSFHIHIVVHCYQKLVAEVMPLVQKTQFDKKLISKAVKLALDDLK 360

Query: 361 KKHAGFLLSANTLKISSFGLDLAKAIAGLVLYSNDLDFKEECLAILGLQPQQSEDEIVEE 420
            K+AGFLLSANTLKIS F  DLAK IAGLVLYSNDLDF+EECLAILGLQPQQSE EIVEE
Sbjct: 361 NKYAGFLLSANTLKISRFAPDLAKTIAGLVLYSNDLDFQEECLAILGLQPQQSEGEIVEE 420

Query: 421 NIKKMIISTIEANDLRPQGTKDVGPLLFEDGRHKLQFVEDDCDEDGFDPMD 472
           NIK+ IIS IE ND RP+GTK+V PLLF DGRH+LQFV+D+CDEDGFDPM+
Sbjct: 421 NIKERIISVIEVNDGRPKGTKEVAPLLFGDGRHQLQFVDDECDEDGFDPME 469

[Close]

BLAST of Sed0020482 vs. ExPASy Swiss-Prot
Match: Q5Q0E6 (Type 2 DNA topoisomerase 6 subunit B-like OS=Arabidopsis thaliana OX=3702 GN=MTOPVIB PE=1 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 1.1e-102
Identity = 198/461 (42.95%), Postives = 288/461 (62.47%), Query Frame = 0


Query: 4   ASLQDLCLHLISSAIRRCICSEQLCRLSVLLQRSSDSDPPLVCVSVSDTGIGSCIEEFQD 63
           A +  L L LISSA +RC  +E LCRLSVLL +S++ DPP+ C+S++DTGIG  +EEFQ+
Sbjct: 5   APVPKLLLQLISSAFQRCRLAEDLCRLSVLLDQSTERDPPITCISIADTGIGCNLEEFQN 64

Query: 64  LKCSVEGFLAEMWDGLVSVRTTNICDDEITCYQLNLKENVTTRKPIRLPSNNKHGVKFSG 123
           L+C  E   A++WDGL+SV+TT   DDE+  Y +NL E +  ++  R PS  K+G KFSG
Sbjct: 65  LRCPREFNGAKIWDGLLSVKTTCFTDDEVYYYHINLDEYIANKRLKRQPSQAKNGAKFSG 124

Query: 124 TEVCLSVSETVDVLLAEINCFFQKIIILKIPNIAMEVVADGQDIPGSRGNAVIPENLSSS 183
           TEV LSV  ++DVL+A I  FFQKII+L+I N+ ++++      PG++   V   N   +
Sbjct: 125 TEVSLSVFGSMDVLVAPIIGFFQKIIVLQILNVTLDLMVKQGTSPGNQTQYVFAVNADKT 184

Query: 184 SSFAASTLDHLKLGFEDYVLKHGSSF--ICDSCFPNRNNLRSGGGMIC-EDKHKTSKLVV 243
             F AS L+ LK G EDYVL+H +    +CD CF +R +L+ G G +C EDKHK     +
Sbjct: 185 PCFTASNLERLKSGLEDYVLRHANCLDTMCDYCFSDREHLKVGSGTVCQEDKHKRVGGTM 244

Query: 244 EAAIVISEISNPINNCFGARSSDTEVFYFKDFAPCSISEPVVKALTGIEWKGYGLTLECA 303
           E  IVIS++     +C  + +  TEV YF +F P  +    + AL  I+WK YGL L   
Sbjct: 245 EVVIVISDLLESTQHCSRSCNGKTEVLYFDNFLPSPVPHLALSALKKIDWKKYGLILANV 304

Query: 304 INKTSHALLKWEHSPQSFHVHIVVHCYHKLVANAMPLVQRTPVDQKLIRKAVKLALDDVK 363
            ++  H  L+W++ P    + I +H YH    N  P  Q+      L++K +K ALD++K
Sbjct: 305 NDQDGHVFLEWDNFPSYVQIQIALHWYH----NQYPTRQKNGPGISLLKKGIKNALDNLK 364

Query: 364 KKHAGFLLSANTLKISSFGLDLAKAIAGLVLYSNDLDFKEECLAILGLQPQQSEDEIVEE 423
            KH GFLLS+++ KI S+  DLA++IAGL+  S DLDF+ +CL++LG Q Q+ E + VE 
Sbjct: 365 AKHEGFLLSSHSRKICSYVPDLARSIAGLIFSSTDLDFQGDCLSVLGFQTQEVERDTVEN 424

Query: 424 NIKKMIISTIEANDLRPQGTKDVGPLLFEDGRHKLQFVEDD 462
            I++ I++ I  N+ +PQ  ++  P LF DG  +  F ED+
Sbjct: 425 YIQRKIVTVIGMNERKPQKDQEAAPFLFFDGESETSFFEDE 461

[Close]

BLAST of Sed0020482 vs. ExPASy TrEMBL
Match: A0A6J1HCF2 (type 2 DNA topoisomerase 6 subunit B-like isoform X6 OS=Cucurbita moschata OX=3662 GN=LOC111462807 PE=4 SV=1)

HSP 1 Score: 751.1 bits (1938), Expect = 2.8e-213
Identity = 372/471 (78.98%), Postives = 413/471 (87.69%), Query Frame = 0


Query: 1   MEFASLQDLCLHLISSAIRRCICSEQLCRLSVLLQRSSDSDPPLVCVSVSDTGIGSCIEE 60
           MEFASLQDLCL LIS AIRRCICSE+LCRLSVLLQRS  SDPPLV +S+SDTG+GSCIEE
Sbjct: 1   MEFASLQDLCLLLISLAIRRCICSERLCRLSVLLQRSPASDPPLVRISISDTGLGSCIEE 60

Query: 61  FQDLKCSVEGFLAEMWDGLVSVRTTNICDDEITCYQLNLKENVTTRKPIRLPSNNKHGVK 120
           FQ+LKC VEG LAE W+G+V VRTTNICD EI+CY+LNLKENVTTRKPI LPSN KHGVK
Sbjct: 61  FQNLKCPVEGILAETWNGIVYVRTTNICDKEISCYELNLKENVTTRKPILLPSNIKHGVK 120

Query: 121 FSGTEVCLSVSETVDVLLAEINCFFQKIIILKIPNIAMEVVADGQDIPGSRGNAVIPENL 180
           FSGTEVCLSVSE+VDVLL E NCFFQKI++LK+PNIAMEV+ADGQD+PGSR +AV  E  
Sbjct: 121 FSGTEVCLSVSESVDVLLEEFNCFFQKILVLKVPNIAMEVMADGQDVPGSRNDAVFLEKF 180

Query: 181 SSSSSFAASTLDHLKLGFEDYVLKHGSSFICDSCFPNRNNLRSGGGMICEDKHKTSKLVV 240
           S SSSFAASTLDHLKLG E YVL+HGSS  CDSCFPNR+NLRSGGGM+CEDKHKT+KLVV
Sbjct: 181 SPSSSFAASTLDHLKLGLESYVLRHGSSLACDSCFPNRDNLRSGGGMVCEDKHKTTKLVV 240

Query: 241 EAAIVISEISNPINNCFGARSSDTEVFYFKDFAPCSISEPVVKALTGIEWKGYGLTLECA 300
           EAA+V SEI NP NNCFGA  SDT+V  FKDFAPCSISE ++KALTGI+WK YGL LECA
Sbjct: 241 EAAVVTSEIPNPTNNCFGAGCSDTKVLCFKDFAPCSISEALLKALTGIDWKRYGLALECA 300

Query: 301 INKTSHALLKWEHSPQSFHVHIVVHCYHKLVANAMPLVQRTPVDQKLIRKAVKLALDDVK 360
           I++ SHALLKWEH P SFH+HIVVHCY KLV  AMPL+Q+T  D+KLIRKAVKLALDD K
Sbjct: 301 IDQRSHALLKWEHMPLSFHIHIVVHCYDKLVFEAMPLLQKTRFDKKLIRKAVKLALDDFK 360

Query: 361 KKHAGFLLSANTLKISSFGLDLAKAIAGLVLYSNDLDFKEECLAILGLQPQQSEDEIVEE 420
            KHAG LLSA+TLKIS F  DLAK+IAGLVLYS+D+DFKEECLAILGLQP QSE EIV E
Sbjct: 361 NKHAGVLLSADTLKISKFAPDLAKSIAGLVLYSSDMDFKEECLAILGLQPHQSEGEIVGE 420

Query: 421 NIKKMIISTIEANDLRPQGTKDVGPLLFEDGRHKLQFVEDDCDEDGFDPMD 472
           NIKK IIS IE ND R QGT++V PLLFE GRH+LQ+V+D+CDEDGFDPMD
Sbjct: 421 NIKKKIISAIEVNDRRQQGTREVAPLLFE-GRHELQYVDDECDEDGFDPMD 470

[Close]

BLAST of Sed0020482 vs. ExPASy TrEMBL
Match: A0A6J1BRH4 (type 2 DNA topoisomerase 6 subunit B-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111004913 PE=4 SV=1)

HSP 1 Score: 748.8 bits (1932), Expect = 1.4e-212
Identity = 374/471 (79.41%), Postives = 411/471 (87.26%), Query Frame = 0


Query: 1   MEFASLQDLCLHLISSAIRRCICSEQLCRLSVLLQRSSDSDPPLVCVSVSDTGIGSCIEE 60
           MEF SLQDL L LISSAIRRCICSE+LCRLSVLLQRS+ SDPPLVC+S+SDTG+GSC+EE
Sbjct: 1   MEFNSLQDLFLLLISSAIRRCICSERLCRLSVLLQRSAASDPPLVCISISDTGLGSCLEE 60

Query: 61  FQDLKCSVEGFLAEMWDGLVSVRTTNICDDEITCYQLNLKENVTTRKPIRLPSNNKHGVK 120
           FQD KC VEG LAE WDG+VS+RTTN CD+EI+CYQLNLKENVT R+PI LPSN KHGVK
Sbjct: 61  FQDFKCPVEGILAEQWDGIVSLRTTNFCDNEISCYQLNLKENVTIREPIWLPSNVKHGVK 120

Query: 121 FSGTEVCLSVSETVDVLLAEINCFFQKIIILKIPNIAMEVVADGQDIPGSRGNAVIPENL 180
           FSGTEV LSVSE VDVLLAEINCFFQKI ILKIPN+AMEVV + QDIPGSR +AV  ENL
Sbjct: 121 FSGTEVRLSVSEAVDVLLAEINCFFQKIRILKIPNVAMEVVVECQDIPGSRNDAVFLENL 180

Query: 181 SSSSSFAASTLDHLKLGFEDYVLKHGSSFICDSCFPNRNNLRSGGGMICEDKHKTSKLVV 240
           SSSSSF ASTLDHLKLG EDYV +HGSS  CDSCFPNR+NL+SGGGMICE+K KT+ L V
Sbjct: 181 SSSSSFTASTLDHLKLGLEDYVSRHGSSLTCDSCFPNRDNLKSGGGMICEEKRKTTTLAV 240

Query: 241 EAAIVISEISNPINNCFGARSSDTEVFYFKDFAPCSISEPVVKALTGIEWKGYGLTLECA 300
           EAAIVISE+SNP  NC GAR SDTEVF FKDFAPCSISE  +KAL GI+WK YGL+LE A
Sbjct: 241 EAAIVISELSNPTTNCLGARFSDTEVFCFKDFAPCSISEAFLKALRGIDWKRYGLSLESA 300

Query: 301 INKTSHALLKWEHSPQSFHVHIVVHCYHKLVANAMPLVQRTPVDQKLIRKAVKLALDDVK 360
            N+ SHALLKWEH P SFH+HIVVHCY KLVA  MPLVQ+T  D+KLI KAVKLALDD+K
Sbjct: 301 TNQRSHALLKWEHVPLSFHIHIVVHCYQKLVAEVMPLVQKTQFDKKLISKAVKLALDDLK 360

Query: 361 KKHAGFLLSANTLKISSFGLDLAKAIAGLVLYSNDLDFKEECLAILGLQPQQSEDEIVEE 420
            K+AGFLLSANTLKIS F  DLAK IAGLVLYSNDLDF+EECLAILGLQPQQSE EIVEE
Sbjct: 361 NKYAGFLLSANTLKISRFAPDLAKTIAGLVLYSNDLDFQEECLAILGLQPQQSEGEIVEE 420

Query: 421 NIKKMIISTIEANDLRPQGTKDVGPLLFEDGRHKLQFVEDDCDEDGFDPMD 472
           NIK+ IIS IE ND RP+GTK+V PLLF DGRH+LQFV+D+CDEDGFDPM+
Sbjct: 421 NIKERIISVIEVNDGRPKGTKEVAPLLFGDGRHQLQFVDDECDEDGFDPME 471

[Close]

BLAST of Sed0020482 vs. ExPASy TrEMBL
Match: A0A6J1K810 (type 2 DNA topoisomerase 6 subunit B-like isoform X5 OS=Cucurbita maxima OX=3661 GN=LOC111491995 PE=4 SV=1)

HSP 1 Score: 743.8 bits (1919), Expect = 4.4e-211
Identity = 369/471 (78.34%), Postives = 410/471 (87.05%), Query Frame = 0


Query: 1   MEFASLQDLCLHLISSAIRRCICSEQLCRLSVLLQRSSDSDPPLVCVSVSDTGIGSCIEE 60
           MEFASLQDLCL LISSAIRRCICSE+LCRLSVLLQRS  SDPPLV +S+SDTG+GSCIEE
Sbjct: 1   MEFASLQDLCLLLISSAIRRCICSERLCRLSVLLQRSPASDPPLVRISISDTGLGSCIEE 60

Query: 61  FQDLKCSVEGFLAEMWDGLVSVRTTNICDDEITCYQLNLKENVTTRKPIRLPSNNKHGVK 120
           FQ+LKC VEG LAE W+G+V VRTTNICD EI+CYQLNLKENVTTRKPI LPSN KHGVK
Sbjct: 61  FQNLKCPVEGILAETWNGIVYVRTTNICDKEISCYQLNLKENVTTRKPILLPSNIKHGVK 120

Query: 121 FSGTEVCLSVSETVDVLLAEINCFFQKIIILKIPNIAMEVVADGQDIPGSRGNAVIPENL 180
           FSGTEVCLSVSE++DVLL E NCFFQKI++LK+PNIAMEV+ADGQD+PGSR +AV  E  
Sbjct: 121 FSGTEVCLSVSESIDVLLEEFNCFFQKILVLKVPNIAMEVMADGQDVPGSRNDAVFLEKF 180

Query: 181 SSSSSFAASTLDHLKLGFEDYVLKHGSSFICDSCFPNRNNLRSGGGMICEDKHKTSKLVV 240
           S SSSFAASTLDHLK G E YVL+HGSS  CDSCFPNR+NLRSGGGM+CEDKHKT+KLVV
Sbjct: 181 SPSSSFAASTLDHLKFGLESYVLRHGSSLACDSCFPNRDNLRSGGGMVCEDKHKTTKLVV 240

Query: 241 EAAIVISEISNPINNCFGARSSDTEVFYFKDFAPCSISEPVVKALTGIEWKGYGLTLECA 300
           EAA+V +EISNP NNCF A  S+T+V  FKDFAPCSISE ++KALTGI+WK YGL LECA
Sbjct: 241 EAAVVTTEISNPTNNCFRAGCSNTKVLCFKDFAPCSISEALLKALTGIDWKRYGLALECA 300

Query: 301 INKTSHALLKWEHSPQSFHVHIVVHCYHKLVANAMPLVQRTPVDQKLIRKAVKLALDDVK 360
           I++ SHALLKWEH P SFH+HIVVHCY K V  AMPL+Q+T  D+KLIRKAVKLALDD K
Sbjct: 301 IDQRSHALLKWEHMPLSFHIHIVVHCYDKHVFEAMPLLQKTRFDKKLIRKAVKLALDDFK 360

Query: 361 KKHAGFLLSANTLKISSFGLDLAKAIAGLVLYSNDLDFKEECLAILGLQPQQSEDEIVEE 420
            KHAG LLSA+TLKIS F  DLAK+IAGLVLYS+D+DFKEECLAILGLQP QSE EIV E
Sbjct: 361 NKHAGVLLSADTLKISKFAPDLAKSIAGLVLYSSDMDFKEECLAILGLQPHQSEGEIVGE 420

Query: 421 NIKKMIISTIEANDLRPQGTKDVGPLLFEDGRHKLQFVEDDCDEDGFDPMD 472
           NIK  IIS IE ND R QGTK+V PLLFE GRH+LQFV+D+CDEDG DPMD
Sbjct: 421 NIKNKIISAIEVNDRRQQGTKEVAPLLFE-GRHELQFVDDECDEDGLDPMD 470

[Close]

BLAST of Sed0020482 vs. ExPASy TrEMBL
Match: A0A6J1BQX4 (type 2 DNA topoisomerase 6 subunit B-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111004913 PE=4 SV=1)

HSP 1 Score: 739.6 bits (1908), Expect = 8.4e-210
Identity = 372/471 (78.98%), Postives = 409/471 (86.84%), Query Frame = 0


Query: 1   MEFASLQDLCLHLISSAIRRCICSEQLCRLSVLLQRSSDSDPPLVCVSVSDTGIGSCIEE 60
           MEF SLQDL L LISSAIRRCICSE+LCRLSVLLQRS+ SDPPLVC  +S+TG+GSC+EE
Sbjct: 1   MEFNSLQDLFLLLISSAIRRCICSERLCRLSVLLQRSAASDPPLVC--ISNTGLGSCLEE 60

Query: 61  FQDLKCSVEGFLAEMWDGLVSVRTTNICDDEITCYQLNLKENVTTRKPIRLPSNNKHGVK 120
           FQD KC VEG LAE WDG+VS+RTTN CD+EI+CYQLNLKENVT R+PI LPSN KHGVK
Sbjct: 61  FQDFKCPVEGILAEQWDGIVSLRTTNFCDNEISCYQLNLKENVTIREPIWLPSNVKHGVK 120

Query: 121 FSGTEVCLSVSETVDVLLAEINCFFQKIIILKIPNIAMEVVADGQDIPGSRGNAVIPENL 180
           FSGTEV LSVSE VDVLLAEINCFFQKI ILKIPN+AMEVV + QDIPGSR +AV  ENL
Sbjct: 121 FSGTEVRLSVSEAVDVLLAEINCFFQKIRILKIPNVAMEVVVECQDIPGSRNDAVFLENL 180

Query: 181 SSSSSFAASTLDHLKLGFEDYVLKHGSSFICDSCFPNRNNLRSGGGMICEDKHKTSKLVV 240
           SSSSSF ASTLDHLKLG EDYV +HGSS  CDSCFPNR+NL+SGGGMICE+K KT+ L V
Sbjct: 181 SSSSSFTASTLDHLKLGLEDYVSRHGSSLTCDSCFPNRDNLKSGGGMICEEKRKTTTLAV 240

Query: 241 EAAIVISEISNPINNCFGARSSDTEVFYFKDFAPCSISEPVVKALTGIEWKGYGLTLECA 300
           EAAIVISE+SNP  NC GAR SDTEVF FKDFAPCSISE  +KAL GI+WK YGL+LE A
Sbjct: 241 EAAIVISELSNPTTNCLGARFSDTEVFCFKDFAPCSISEAFLKALRGIDWKRYGLSLESA 300

Query: 301 INKTSHALLKWEHSPQSFHVHIVVHCYHKLVANAMPLVQRTPVDQKLIRKAVKLALDDVK 360
            N+ SHALLKWEH P SFH+HIVVHCY KLVA  MPLVQ+T  D+KLI KAVKLALDD+K
Sbjct: 301 TNQRSHALLKWEHVPLSFHIHIVVHCYQKLVAEVMPLVQKTQFDKKLISKAVKLALDDLK 360

Query: 361 KKHAGFLLSANTLKISSFGLDLAKAIAGLVLYSNDLDFKEECLAILGLQPQQSEDEIVEE 420
            K+AGFLLSANTLKIS F  DLAK IAGLVLYSNDLDF+EECLAILGLQPQQSE EIVEE
Sbjct: 361 NKYAGFLLSANTLKISRFAPDLAKTIAGLVLYSNDLDFQEECLAILGLQPQQSEGEIVEE 420

Query: 421 NIKKMIISTIEANDLRPQGTKDVGPLLFEDGRHKLQFVEDDCDEDGFDPMD 472
           NIK+ IIS IE ND RP+GTK+V PLLF DGRH+LQFV+D+CDEDGFDPM+
Sbjct: 421 NIKERIISVIEVNDGRPKGTKEVAPLLFGDGRHQLQFVDDECDEDGFDPME 469

[Close]

BLAST of Sed0020482 vs. ExPASy TrEMBL
Match: A0A6J1HCE6 (type 2 DNA topoisomerase 6 subunit B-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462807 PE=4 SV=1)

HSP 1 Score: 738.4 bits (1905), Expect = 1.9e-209
Identity = 372/493 (75.46%), Postives = 413/493 (83.77%), Query Frame = 0


Query: 1   MEFASLQDLCLHLISSAIRRCICSEQLCRLSVLLQRSSDSDPPLVCVSVSDTGIGSCIEE 60
           MEFASLQDLCL LIS AIRRCICSE+LCRLSVLLQRS  SDPPLV +S+SDTG+GSCIEE
Sbjct: 1   MEFASLQDLCLLLISLAIRRCICSERLCRLSVLLQRSPASDPPLVRISISDTGLGSCIEE 60

Query: 61  FQDLKCSVEGFLAEMWDGLVSVRTTNICDDEITCYQLNLKENVTTRKPIRLPSNNKHGVK 120
           FQ+LKC VEG LAE W+G+V VRTTNICD EI+CY+LNLKENVTTRKPI LPSN KHGVK
Sbjct: 61  FQNLKCPVEGILAETWNGIVYVRTTNICDKEISCYELNLKENVTTRKPILLPSNIKHGVK 120

Query: 121 FSGTEVCLSVSETVDVLLAEINCFFQKIIILKIPNIAMEVVADGQDIPGSRGNAVIPENL 180
           FSGTEVCLSVSE+VDVLL E NCFFQKI++LK+PNIAMEV+ADGQD+PGSR +AV  E  
Sbjct: 121 FSGTEVCLSVSESVDVLLEEFNCFFQKILVLKVPNIAMEVMADGQDVPGSRNDAVFLEKF 180

Query: 181 SSSSSFAASTLDHLKLGFEDYVLKHGSSFICDSCFPNRNNLRSGGGMICEDKHKTSKLVV 240
           S SSSFAASTLDHLKLG E YVL+HGSS  CDSCFPNR+NLRSGGGM+CEDKHKT+KLVV
Sbjct: 181 SPSSSFAASTLDHLKLGLESYVLRHGSSLACDSCFPNRDNLRSGGGMVCEDKHKTTKLVV 240

Query: 241 EAAIVISEISNPINNCFGARSSDTEVFYFKDFAPCSISEPVVKALTGIEWKGYGLTLECA 300
           EAA+V SEI NP NNCFGA  SDT+V  FKDFAPCSISE ++KALTGI+WK YGL LECA
Sbjct: 241 EAAVVTSEIPNPTNNCFGAGCSDTKVLCFKDFAPCSISEALLKALTGIDWKRYGLALECA 300

Query: 301 INKTSHALLKWEHSPQSFHVHIVVHCYHKLVANAMPLVQRTPVDQKLIRKAVKLALDDVK 360
           I++ SHALLKWEH P SFH+HIVVHCY KLV  AMPL+Q+T  D+KLIRKAVKLALDD K
Sbjct: 301 IDQRSHALLKWEHMPLSFHIHIVVHCYDKLVFEAMPLLQKTRFDKKLIRKAVKLALDDFK 360

Query: 361 KKHAGFLLSANTLK----------------------ISSFGLDLAKAIAGLVLYSNDLDF 420
            KHAG LLSA+TLK                      IS F  DLAK+IAGLVLYS+D+DF
Sbjct: 361 NKHAGVLLSADTLKVLACSRRNQEQLPKLASIFHLQISKFAPDLAKSIAGLVLYSSDMDF 420

Query: 421 KEECLAILGLQPQQSEDEIVEENIKKMIISTIEANDLRPQGTKDVGPLLFEDGRHKLQFV 472
           KEECLAILGLQP QSE EIV ENIKK IIS IE ND R QGT++V PLLFE GRH+LQ+V
Sbjct: 421 KEECLAILGLQPHQSEGEIVGENIKKKIISAIEVNDRRQQGTREVAPLLFE-GRHELQYV 480

[Close]

BLAST of Sed0020482 vs. TAIR 10
Match: AT1G60460.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 23 Blast hits to 23 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 376.3 bits (965), Expect = 3.6e-104
Identity = 200/465 (43.01%), Postives = 290/465 (62.37%), Query Frame = 0


Query: 4   ASLQDLCLHLISSAIRRCICSEQLCRLSVLLQRSSDSDPPLVCVSVSDTGIGSCIEEFQD 63
           A +  L L LISSA +RC  +E LCRLSVLL +S++ DPP+ C+S++DTGIG  +EEFQ+
Sbjct: 5   APVPKLLLQLISSAFQRCRLAEDLCRLSVLLDQSTERDPPITCISIADTGIGCNLEEFQN 64

Query: 64  LKCSVEGFLAEMWDGLVSVRTTNICDDEITCYQLNLKENVTTRKPIRLPSNNKHGVKFSG 123
           L+C  E   A++WDGL+SV+TT   DDE+  Y +NL E +  ++  R PS  K+G KFSG
Sbjct: 65  LRCPREFNGAKIWDGLLSVKTTCFTDDEVYYYHINLDEYIANKRLKRQPSQAKNGAKFSG 124

Query: 124 TEVCLSVSETVDVLLAEINCFFQKIIILKIPNIAMEVVADGQDIPGSRGNAVIPENLSSS 183
           TEV LSV  ++DVL+A I  FFQKII+L+I N+ ++++      PG++   V   N   +
Sbjct: 125 TEVSLSVFGSMDVLVAPIIGFFQKIIVLQILNVTLDLMVKQGTSPGNQTQYVFAVNADKT 184

Query: 184 SSFAASTLDHLKLGFEDYVLKHGSSF--ICDSCFPNRNNLRSGGGMIC-EDKHKTSKLVV 243
             F AS L+ LK G EDYVL+H +    +CD CF +R +L+ G G +C EDKHK     +
Sbjct: 185 PCFTASNLERLKSGLEDYVLRHANCLDTMCDYCFSDREHLKVGSGTVCQEDKHKRVGGTM 244

Query: 244 EAAIVISEISNPINNCFGARSSDTEVFYFKDFAPCSISEPVVKALTGIEWKGYGLTLECA 303
           E  IVIS++     +C  + +  TEV YF +F P  +    + AL  I+WK YGL L   
Sbjct: 245 EVVIVISDLLESTQHCSRSCNGKTEVLYFDNFLPSPVPHLALSALKKIDWKKYGLILANV 304

Query: 304 INKTSHALLKWEHSPQSFHVHIVVHCYHKLVANAMPLVQRTPVDQKLIRKAVKLALDDVK 363
            ++  H  L+W++ P    + I +H YH    N  P  Q+      L++K +K ALD++K
Sbjct: 305 NDQDGHVFLEWDNFPSYVQIQIALHWYH----NQYPTRQKNGPGISLLKKGIKNALDNLK 364

Query: 364 KKHAGFLLSANTLKISSFGLDLAKAIAGLVLYSNDLDFKEECLAILGLQPQQSEDEIVEE 423
            KH GFLLS+++ KI S+  DLA++IAGL+  S DLDF+ +CL++LG Q Q+ E + VE 
Sbjct: 365 AKHEGFLLSSHSRKICSYVPDLARSIAGLIFSSTDLDFQGDCLSVLGFQTQEVERDTVEN 424

Query: 424 NIKKMIISTIEANDLRPQGTKDVGPLLFEDGRHKLQFVEDDCDED 466
            I++ I++ I  N+ +PQ  ++  P LF DG  +  F ED+  ED
Sbjct: 425 YIQRKIVTVIGMNERKPQKDQEAAPFLFFDGESETSFFEDEEVED 465

[Close]

BLAST of Sed0020482 vs. TAIR 10
Match: AT1G60460.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 375.2 bits (962), Expect = 8.0e-104
Identity = 198/461 (42.95%), Postives = 288/461 (62.47%), Query Frame = 0


Query: 4   ASLQDLCLHLISSAIRRCICSEQLCRLSVLLQRSSDSDPPLVCVSVSDTGIGSCIEEFQD 63
           A +  L L LISSA +RC  +E LCRLSVLL +S++ DPP+ C+S++DTGIG  +EEFQ+
Sbjct: 5   APVPKLLLQLISSAFQRCRLAEDLCRLSVLLDQSTERDPPITCISIADTGIGCNLEEFQN 64

Query: 64  LKCSVEGFLAEMWDGLVSVRTTNICDDEITCYQLNLKENVTTRKPIRLPSNNKHGVKFSG 123
           L+C  E   A++WDGL+SV+TT   DDE+  Y +NL E +  ++  R PS  K+G KFSG
Sbjct: 65  LRCPREFNGAKIWDGLLSVKTTCFTDDEVYYYHINLDEYIANKRLKRQPSQAKNGAKFSG 124

Query: 124 TEVCLSVSETVDVLLAEINCFFQKIIILKIPNIAMEVVADGQDIPGSRGNAVIPENLSSS 183
           TEV LSV  ++DVL+A I  FFQKII+L+I N+ ++++      PG++   V   N   +
Sbjct: 125 TEVSLSVFGSMDVLVAPIIGFFQKIIVLQILNVTLDLMVKQGTSPGNQTQYVFAVNADKT 184

Query: 184 SSFAASTLDHLKLGFEDYVLKHGSSF--ICDSCFPNRNNLRSGGGMIC-EDKHKTSKLVV 243
             F AS L+ LK G EDYVL+H +    +CD CF +R +L+ G G +C EDKHK     +
Sbjct: 185 PCFTASNLERLKSGLEDYVLRHANCLDTMCDYCFSDREHLKVGSGTVCQEDKHKRVGGTM 244

Query: 244 EAAIVISEISNPINNCFGARSSDTEVFYFKDFAPCSISEPVVKALTGIEWKGYGLTLECA 303
           E  IVIS++     +C  + +  TEV YF +F P  +    + AL  I+WK YGL L   
Sbjct: 245 EVVIVISDLLESTQHCSRSCNGKTEVLYFDNFLPSPVPHLALSALKKIDWKKYGLILANV 304

Query: 304 INKTSHALLKWEHSPQSFHVHIVVHCYHKLVANAMPLVQRTPVDQKLIRKAVKLALDDVK 363
            ++  H  L+W++ P    + I +H YH    N  P  Q+      L++K +K ALD++K
Sbjct: 305 NDQDGHVFLEWDNFPSYVQIQIALHWYH----NQYPTRQKNGPGISLLKKGIKNALDNLK 364

Query: 364 KKHAGFLLSANTLKISSFGLDLAKAIAGLVLYSNDLDFKEECLAILGLQPQQSEDEIVEE 423
            KH GFLLS+++ KI S+  DLA++IAGL+  S DLDF+ +CL++LG Q Q+ E + VE 
Sbjct: 365 AKHEGFLLSSHSRKICSYVPDLARSIAGLIFSSTDLDFQGDCLSVLGFQTQEVERDTVEN 424

Query: 424 NIKKMIISTIEANDLRPQGTKDVGPLLFEDGRHKLQFVEDD 462
            I++ I++ I  N+ +PQ  ++  P LF DG  +  F ED+
Sbjct: 425 YIQRKIVTVIGMNERKPQKDQEAAPFLFFDGESETSFFEDE 461

[Close]

BLAST of Sed0020482 vs. TAIR 10
Match: AT1G60460.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 363.6 bits (932), Expect = 2.4e-100
Identity = 189/445 (42.47%), Postives = 278/445 (62.47%), Query Frame = 0


Query: 20  RCICSEQLCRLSVLLQRSSDSDPPLVCVSVSDTGIGSCIEEFQDLKCSVEGFLAEMWDGL 79
           +C  +E LCRLSVLL +S++ DPP+ C+S++DTGIG  +EEFQ+L+C  E   A++WDGL
Sbjct: 10  KCRLAEDLCRLSVLLDQSTERDPPITCISIADTGIGCNLEEFQNLRCPREFNGAKIWDGL 69

Query: 80  VSVRTTNICDDEITCYQLNLKENVTTRKPIRLPSNNKHGVKFSGTEVCLSVSETVDVLLA 139
           +SV+TT   DDE+  Y +NL E +  ++  R PS  K+G KFSGTEV LSV  ++DVL+A
Sbjct: 70  LSVKTTCFTDDEVYYYHINLDEYIANKRLKRQPSQAKNGAKFSGTEVSLSVFGSMDVLVA 129

Query: 140 EINCFFQKIIILKIPNIAMEVVADGQDIPGSRGNAVIPENLSSSSSFAASTLDHLKLGFE 199
            I  FFQKII+L+I N+ ++++      PG++   V   N   +  F AS L+ LK G E
Sbjct: 130 PIIGFFQKIIVLQILNVTLDLMVKQGTSPGNQTQYVFAVNADKTPCFTASNLERLKSGLE 189

Query: 200 DYVLKHGSSF--ICDSCFPNRNNLRSGGGMIC-EDKHKTSKLVVEAAIVISEISNPINNC 259
           DYVL+H +    +CD CF +R +L+ G G +C EDKHK     +E  IVIS++     +C
Sbjct: 190 DYVLRHANCLDTMCDYCFSDREHLKVGSGTVCQEDKHKRVGGTMEVVIVISDLLESTQHC 249

Query: 260 FGARSSDTEVFYFKDFAPCSISEPVVKALTGIEWKGYGLTLECAINKTSHALLKWEHSPQ 319
             + +  TEV YF +F P  +    + AL  I+WK YGL L    ++  H  L+W++ P 
Sbjct: 250 SRSCNGKTEVLYFDNFLPSPVPHLALSALKKIDWKKYGLILANVNDQDGHVFLEWDNFPS 309

Query: 320 SFHVHIVVHCYHKLVANAMPLVQRTPVDQKLIRKAVKLALDDVKKKHAGFLLSANTLKIS 379
              + I +H YH    N  P  Q+      L++K +K ALD++K KH GFLLS+++ KI 
Sbjct: 310 YVQIQIALHWYH----NQYPTRQKNGPGISLLKKGIKNALDNLKAKHEGFLLSSHSRKIC 369

Query: 380 SFGLDLAKAIAGLVLYSNDLDFKEECLAILGLQPQQSEDEIVEENIKKMIISTIEANDLR 439
           S+  DLA++IAGL+  S DLDF+ +CL++LG Q Q+ E + VE  I++ I++ I  N+ +
Sbjct: 370 SYVPDLARSIAGLIFSSTDLDFQGDCLSVLGFQTQEVERDTVENYIQRKIVTVIGMNERK 429

Query: 440 PQGTKDVGPLLFEDGRHKLQFVEDD 462
           PQ  ++  P LF DG  +  F ED+
Sbjct: 430 PQKDQEAAPFLFFDGESETSFFEDE 450

The following BLAST results are available for this feature:

BLAST of Sed0020482 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023545219.1	2.1e-215	79.83	type 2 DNA topoisomerase 6 subunit B-like [Cucurbita pepo subsp. pepo]	[more]
XP_022962327.1	5.7e-213	78.98	type 2 DNA topoisomerase 6 subunit B-like isoform X6 [Cucurbita moschata]	[more]
XP_022131879.1	2.8e-212	79.41	type 2 DNA topoisomerase 6 subunit B-like isoform X1 [Momordica charantia]	[more]
XP_022996890.1	9.2e-211	78.34	type 2 DNA topoisomerase 6 subunit B-like isoform X5 [Cucurbita maxima]	[more]
XP_022131880.1	1.7e-209	78.98	type 2 DNA topoisomerase 6 subunit B-like isoform X2 [Momordica charantia]	[more]

BLAST of Sed0020482 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5Q0E6	1.1e-102	42.95	Type 2 DNA topoisomerase 6 subunit B-like OS=Arabidopsis thaliana OX=3702 GN=MTO...	[more]

BLAST of Sed0020482 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HCF2	2.8e-213	78.98	type 2 DNA topoisomerase 6 subunit B-like isoform X6 OS=Cucurbita moschata OX=36...	[more]
A0A6J1BRH4	1.4e-212	79.41	type 2 DNA topoisomerase 6 subunit B-like isoform X1 OS=Momordica charantia OX=3...	[more]
A0A6J1K810	4.4e-211	78.34	type 2 DNA topoisomerase 6 subunit B-like isoform X5 OS=Cucurbita maxima OX=3661...	[more]
A0A6J1BQX4	8.4e-210	78.98	type 2 DNA topoisomerase 6 subunit B-like isoform X2 OS=Momordica charantia OX=3...	[more]
A0A6J1HCE6	1.9e-209	75.46	type 2 DNA topoisomerase 6 subunit B-like isoform X1 OS=Cucurbita moschata OX=36...	[more]

BLAST of Sed0020482 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G60460.1	3.6e-104	43.01	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G60460.3	8.0e-104	42.95	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G60460.2	2.4e-100	42.47	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR034566	Type 2 DNA topoisomerase 6 subunit B-like, plants	PANTHER	PTHR36722	TYPE 2 DNA TOPOISOMERASE 6 SUBUNIT B-LIKE	coord: 5..465

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0020482.1	Sed0020482.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042138	meiotic DNA double-strand break formation
molecular_function	GO:0016853	isomerase activity