Sed0020426 (gene) Chayote v1

Overview


Name	Sed0020426
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Location	LG10: 16346158 .. 16348648 (-)
RNA-Seq Expression	Sed0020426
Synteny	Sed0020426

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTACCCTTGGTTATTTAAAATTTACATAAATTCAATTTATTTTTCTAAAAGAATGAAGGGGCTGAATAAGAATTCATCAAATCATTTGGAGGACCCTTTTCTTTGTCTAATATAGCTGAATTCTTGTGTTGGATAAGATAAGATAATAGAGATAGAGTGAGGAGGAGGAAAAATGTTGGCTGTTAGCCAAGCTTCGGCCGGAGTTGTTCCGGCGAGAAGGATTTCAGTCTCCGCTCTTCCTTGTCTCCAATTCTCAAACCCCAATCCCAAATTGACGATTCCCAGAACAAAGCCTTCGAAACCCCTCAACCTAACCCTGTCCAAACCCCAAGGAACCGCCGATTCCTCCCTCTCCGCCGACCAGACCGTTTTTGTCGGCGACCACAATGTTCCCTTGGAAGGCGTTATTCAGTTCGAGAAGCCCGATGCCTCTTCTTCTCGTTTCTCCAAATGGGGGTAATCCTTACCATTCCCTCCATCCATTCATTCATTCATTCTTTTTGTTTTCTTTCATTTTGGTTGGGTTATTGTTTGTTGGGTGCCTCTTCAGCCGTGTTGCTCTGCTCGCCGGCGGAGATGTGCTCGCCTTGCTCTTGTTCTCTTCGATTGGAAGATTCAGCCATGGTCTCCCTGTTCTCCACTTCGACACTTTCCGCACCGCCGACCCTTTTATTGCCGGTATGCTTCCCTGCTTCCCTCCCTTCCTATCTCTCCTTCCATCTTTAACTGCCCTTTCTTCTTACAGGCTGGTTTCTCAGCGCTTACTTTCTCGGAGGTTATGGAGACGATGGGCGTGCTTTGAACGGCTATTCCAACGCTCTCATTGCCGCCTCTAAATCATGGGCTTTGGGGATTCCAGTAACTTTATGATTACATGACCCTTACTTATTGTGTTTCTTCTCAATTCCACTGTTTTCTTACCTGGTCTTTCTTTCCAACTTCTAGACTCAAGTGGAGTTCTTGTTAGATTACTATTCCGCTTCTTCAGGCTTCAAATACTTCAAACGCCTTGCATGAGTGATTAGGATGAGTAGTTATTTTGGGTGATTCCAGTCACAAATTGCCGTTTGGATATGGATTTTTGTATAGGTGTGCAGATAATAGCTCTTATGAATGGGAAATGTTGTGGAGGATTGAGTGGATAGAAATGAGTGGAGTGGTTACAATAGTTTGTTTGGATATATATATAATTTTATGAAGAGTGATGGTAAAAGCTCGTTTGTAATATCTGGTTTAATACCGAAAACAAACACCTCCTATAGAAACAAGCATCCATGTAATTGCATTGTACACTTTTCACTGAAATACTTATGTCTAAACTACTTTTGTTACTTTTTTATAAGTTCCACTTCCAAACATACACTCACACATAAGCTTCATAGCAATGGTTTCCTCCATTTCTGAAACTTAAGGCTAGAGTTGGATTGTTCGCAGGCAAATACCATTGAACATCCTGGGATTCCCTGGAGATGGATCTTATTTCATGATAGAGAGCAGTACCTTGATAATTGTATCCTAGTCATATTATTGACTCCAAAGTGTATAGACATTATACATATGGATCATCATTCTTTGTATGTGTTTTGCAGCTAGGTCTCATAATACGGGCTGCAACATCTGGCCACATTCCATCATACAATTTCATAGGAGTAACGATGGGAAGCACAGCTGTCTTGCTCATCGGTTGGAGGGCGATACGTTATAAAGTTTTTCCCATCGATAATGGCAAGAAGAACAATGTATATCGTCGTGGGAACCCATTTGAACTATTTGAGGTGCCAGACTTTCTTCTCTATCAAACATCCATAATTCGCAACACCTATTTATGTCATTCCATTCCCCATGAGTTCTTCTTTGCAAGCGGTTTATTTCTATCTTGAATTGGATGTCATGCTGGTGTTATGTGATGAGTTGGATGTCACAATTGAACTGCATATCACTAAAATGTTAGGCCTAGAGTATGATTATGACAAAGACAACACACATGTATAGAGAAAAGTCTTCATATTCATTTGCTTCTGCAATGTGCATTCTCATTTCATTTGTTTACTCTTGGTGTTTTCTCATCCCATGATCATTACTTTTGGTTAATTCTAACATACAACTTATCTCTGTAAATCTGGTGCAGTTGTTGACATCGTTGGTGAGAAGATGGTGATAATGGACAACATCCTCCTCATATGCTTGTATCATATTTTGTTTTTAAAAGGGACGCCCTACTTATGAACAAAATGTGTATTTCTCTAATCCAAGTTTTGTTAATTGGCTCCTGCAAGTAAAGTTCGATAATCAATAGTGAGATAAGTTTATTGTCTAGTAATGTTTAGATTATTCAATTCTCTTAAGGTTGAAGCAAATGACAAAGATCGATAATTTGTCTGAATATCTTATTTCTTTCGTACTTTTTTCGATCCATCTCTCACACATATGTAATATTGATATTTATGCTCTAGAACTTATATATTTTAATTTTTGAGCCTGTTTACCGAC

mRNA sequence

CTTACCCTTGGTTATTTAAAATTTACATAAATTCAATTTATTTTTCTAAAAGAATGAAGGGGCTGAATAAGAATTCATCAAATCATTTGGAGGACCCTTTTCTTTGTCTAATATAGCTGAATTCTTGTGTTGGATAAGATAAGATAATAGAGATAGAGTGAGGAGGAGGAAAAATGTTGGCTGTTAGCCAAGCTTCGGCCGGAGTTGTTCCGGCGAGAAGGATTTCAGTCTCCGCTCTTCCTTGTCTCCAATTCTCAAACCCCAATCCCAAATTGACGATTCCCAGAACAAAGCCTTCGAAACCCCTCAACCTAACCCTGTCCAAACCCCAAGGAACCGCCGATTCCTCCCTCTCCGCCGACCAGACCGTTTTTGTCGGCGACCACAATGTTCCCTTGGAAGGCGTTATTCAGTTCGAGAAGCCCGATGCCTCTTCTTCTCGTTTCTCCAAATGGGGCCGTGTTGCTCTGCTCGCCGGCGGAGATGTGCTCGCCTTGCTCTTGTTCTCTTCGATTGGAAGATTCAGCCATGGTCTCCCTGTTCTCCACTTCGACACTTTCCGCACCGCCGACCCTTTTATTGCCGGCTGGTTTCTCAGCGCTTACTTTCTCGGAGGTTATGGAGACGATGGGCGTGCTTTGAACGGCTATTCCAACGCTCTCATTGCCGCCTCTAAATCATGGGCTTTGGGGATTCCACTAGGTCTCATAATACGGGCTGCAACATCTGGCCACATTCCATCATACAATTTCATAGGAGTAACGATGGGAAGCACAGCTGTCTTGCTCATCGGTTGGAGGGCGATACGTTATAAAGTTTTTCCCATCGATAATGGCAAGAAGAACAATGTATATCGTCGTGGGAACCCATTTGAACTATTTGAGTTGTTGACATCGTTGGTGAGAAGATGGTGATAATGGACAACATCCTCCTCATATGCTTGTATCATATTTTGTTTTTAAAAGGGACGCCCTACTTATGAACAAAATGTGTATTTCTCTAATCCAAGTTTTGTTAATTGGCTCCTGCAAGTAAAGTTCGATAATCAATAGTGAGATAAGTTTATTGTCTAGTAATGTTTAGATTATTCAATTCTCTTAAGGTTGAAGCAAATGACAAAGATCGATAATTTGTCTGAATATCTTATTTCTTTCGTACTTTTTTCGATCCATCTCTCACACATATGTAATATTGATATTTATGCTCTAGAACTTATATATTTTAATTTTTGAGCCTGTTTACCGAC

Coding sequence (CDS)

ATGTTGGCTGTTAGCCAAGCTTCGGCCGGAGTTGTTCCGGCGAGAAGGATTTCAGTCTCCGCTCTTCCTTGTCTCCAATTCTCAAACCCCAATCCCAAATTGACGATTCCCAGAACAAAGCCTTCGAAACCCCTCAACCTAACCCTGTCCAAACCCCAAGGAACCGCCGATTCCTCCCTCTCCGCCGACCAGACCGTTTTTGTCGGCGACCACAATGTTCCCTTGGAAGGCGTTATTCAGTTCGAGAAGCCCGATGCCTCTTCTTCTCGTTTCTCCAAATGGGGCCGTGTTGCTCTGCTCGCCGGCGGAGATGTGCTCGCCTTGCTCTTGTTCTCTTCGATTGGAAGATTCAGCCATGGTCTCCCTGTTCTCCACTTCGACACTTTCCGCACCGCCGACCCTTTTATTGCCGGCTGGTTTCTCAGCGCTTACTTTCTCGGAGGTTATGGAGACGATGGGCGTGCTTTGAACGGCTATTCCAACGCTCTCATTGCCGCCTCTAAATCATGGGCTTTGGGGATTCCACTAGGTCTCATAATACGGGCTGCAACATCTGGCCACATTCCATCATACAATTTCATAGGAGTAACGATGGGAAGCACAGCTGTCTTGCTCATCGGTTGGAGGGCGATACGTTATAAAGTTTTTCCCATCGATAATGGCAAGAAGAACAATGTATATCGTCGTGGGAACCCATTTGAACTATTTGAGTTGTTGACATCGTTGGTGAGAAGATGGTGA

Protein sequence

MLAVSQASAGVVPARRISVSALPCLQFSNPNPKLTIPRTKPSKPLNLTLSKPQGTADSSLSADQTVFVGDHNVPLEGVIQFEKPDASSSRFSKWGRVALLAGGDVLALLLFSSIGRFSHGLPVLHFDTFRTADPFIAGWFLSAYFLGGYGDDGRALNGYSNALIAASKSWALGIPLGLIIRAATSGHIPSYNFIGVTMGSTAVLLIGWRAIRYKVFPIDNGKKNNVYRRGNPFELFELLTSLVRRW

Homology

[Close]

BLAST of Sed0020426 vs. NCBI nr
Match: XP_008444522.1 (PREDICTED: uncharacterized protein LOC103487814 [Cucumis melo])

HSP 1 Score: 388.3 bits (996), Expect = 5.0e-104
Identity = 198/261 (75.86%), Postives = 219/261 (83.91%), Query Frame = 0


Query: 1   MLAVSQASAGVVPARRISVSALPCLQFSNPNP---KLTIPRTKPSKPLNLTLSKPQGTAD 60
           ML ++QA AGV+PARR S+S +P L+FSNPNP      IPR  P+KPLN+TLSK +GT D
Sbjct: 1   MLPLTQAPAGVLPARRFSLSTIPSLKFSNPNPFRRSKFIPRRNPTKPLNITLSKAEGTVD 60

Query: 61  SSLSA------------DQTVFVGDHNVPLEGVIQFEKPDASSSRFSKWGRVALLAGGDV 120
           S+  A            DQTVFVGD NVPLEGVIQF+KP+ +SSR SKWGRVALLAGGDV
Sbjct: 61  STKQALSNSPTPPPFPTDQTVFVGDENVPLEGVIQFDKPN-TSSRLSKWGRVALLAGGDV 120

Query: 121 LALLLFSSIGRFSHGLPVLHFDTFRTADPFIAGWFLSAYFLGGYGDDGRALNGYSNALIA 180
           LALLLFSSIGRFSHGLPV  F+T RTADPFIAGWFLSAYFLGGYGDDGR +NGYS A+IA
Sbjct: 121 LALLLFSSIGRFSHGLPVFDFETLRTADPFIAGWFLSAYFLGGYGDDGRGINGYSKAVIA 180

Query: 181 ASKSWALGIPLGLIIRAATSGHIPSYNFIGVTMGSTAVLLIGWRAIRYKVFPIDNGKKNN 240
           ASKSWALGIPLGL++RAATSG +P Y FIGVTMGSTAVLLIGWRAI YKVFP+ NGKKN+
Sbjct: 181 ASKSWALGIPLGLLVRAATSGRLPPYTFIGVTMGSTAVLLIGWRAILYKVFPVSNGKKND 240

Query: 241 VYRRGNPFELFELLTSLVRRW 247
           VYRRGNPFELFELLTSLVRRW
Sbjct: 241 VYRRGNPFELFELLTSLVRRW 260

[Close]

BLAST of Sed0020426 vs. NCBI nr
Match: XP_004142905.1 (uncharacterized protein LOC101212562 [Cucumis sativus] >KGN62425.1 hypothetical protein Csa_018694 [Cucumis sativus])

HSP 1 Score: 386.0 bits (990), Expect = 2.5e-103
Identity = 194/261 (74.33%), Postives = 218/261 (83.52%), Query Frame = 0


Query: 1   MLAVSQASAGVVPARRISVSALPCLQFSNPNP---KLTIPRTKPSKPLNLTLSKPQGTAD 60
           ML +SQ  AGV+PARR+S+S +P L+FSNPNP      IPR  P+KP N+TLSK +GT D
Sbjct: 1   MLPLSQTPAGVLPARRLSLSTIPSLKFSNPNPFRRSKFIPRRNPTKPFNITLSKAEGTVD 60

Query: 61  SSLSA------------DQTVFVGDHNVPLEGVIQFEKPDASSSRFSKWGRVALLAGGDV 120
           S+  A            DQTVFVGD NVPLEGVIQF+KP+ +SSR +KWGRVA LAGGDV
Sbjct: 61  STKQALSNSPTPPPFPNDQTVFVGDENVPLEGVIQFDKPN-TSSRLTKWGRVAFLAGGDV 120

Query: 121 LALLLFSSIGRFSHGLPVLHFDTFRTADPFIAGWFLSAYFLGGYGDDGRALNGYSNALIA 180
           LALLLFSSIGRFSHGLPV  F+T RTADPFIAGWFLSAYFLGGYGDDGR +NGYS A++A
Sbjct: 121 LALLLFSSIGRFSHGLPVFDFETLRTADPFIAGWFLSAYFLGGYGDDGRGINGYSKAVVA 180

Query: 181 ASKSWALGIPLGLIIRAATSGHIPSYNFIGVTMGSTAVLLIGWRAIRYKVFPIDNGKKNN 240
           A+KSWALGIPLGL++RAATSGH+P YNFIGVTMGSTAVLLIGWRAI YKVFP+ N KKN+
Sbjct: 181 ATKSWALGIPLGLLVRAATSGHLPPYNFIGVTMGSTAVLLIGWRAILYKVFPVSNSKKND 240

Query: 241 VYRRGNPFELFELLTSLVRRW 247
           VYRRGNPFELFELLTSLVRRW
Sbjct: 241 VYRRGNPFELFELLTSLVRRW 260

[Close]

BLAST of Sed0020426 vs. NCBI nr
Match: XP_038883997.1 (uncharacterized protein LOC120074958 [Benincasa hispida])

HSP 1 Score: 383.6 bits (984), Expect = 1.2e-102
Identity = 198/261 (75.86%), Postives = 220/261 (84.29%), Query Frame = 0


Query: 1   MLAVSQASAGVVPARRISVSALPCLQFSNPNP---KLTIPRTKPSKPLNLTLSKPQGTAD 60
           ML +SQA AGV+PARR S+S LP L+FSNPNP      IPR  P+KPLN+TLSK +GT D
Sbjct: 1   MLPLSQAPAGVLPARRSSLSTLPSLKFSNPNPFRRSKFIPRRNPAKPLNITLSKAEGTVD 60

Query: 61  SSLSA------------DQTVFVGDHNVPLEGVIQFEKPDASSSRFSKWGRVALLAGGDV 120
           S+  A            DQTVFVGD NVPLEGVIQF+KP+ +SSR SKWGRVALLAGGDV
Sbjct: 61  STKQALSNSSTPPPFPTDQTVFVGDENVPLEGVIQFDKPN-TSSRLSKWGRVALLAGGDV 120

Query: 121 LALLLFSSIGRFSHGLPVLHFDTFRTADPFIAGWFLSAYFLGGYGDDGRALNGYSNALIA 180
           LALLLFSSIGRFSHGLPV  F+T RTADPFIAGWFLSAYFLGGYG+DGR +NGYS A+IA
Sbjct: 121 LALLLFSSIGRFSHGLPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGINGYSKAVIA 180

Query: 181 ASKSWALGIPLGLIIRAATSGHIPSYNFIGVTMGSTAVLLIGWRAIRYKVFPIDNGKKNN 240
           ASKSWALGIPLGL++RAATSGH+P YNFIGVTMGSTAVLLIGWRA+ YKVFP++N  KN+
Sbjct: 181 ASKSWALGIPLGLLVRAATSGHLPPYNFIGVTMGSTAVLLIGWRAMLYKVFPVNN-SKND 240

Query: 241 VYRRGNPFELFELLTSLVRRW 247
           VYRRGNPFELFELLTSLVRRW
Sbjct: 241 VYRRGNPFELFELLTSLVRRW 259

[Close]

BLAST of Sed0020426 vs. NCBI nr
Match: XP_023545360.1 (uncharacterized protein LOC111804800 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 383.3 bits (983), Expect = 1.6e-102
Identity = 194/261 (74.33%), Postives = 219/261 (83.91%), Query Frame = 0


Query: 1   MLAVSQASAGVVPARRISVSALPCLQFSNPNP---KLTIPRTKPSKPLNLTLSKPQGTAD 60
           ML +SQA AGV+PAR+ S++ LP L+FSNPNP      IPR  P+KPLN+TLSK +GT D
Sbjct: 1   MLPLSQAPAGVLPARKFSLTTLPSLKFSNPNPFRRSKFIPRRNPAKPLNITLSKAEGTVD 60

Query: 61  SSLSA------------DQTVFVGDHNVPLEGVIQFEKPDASSSRFSKWGRVALLAGGDV 120
           S+  A            DQTVFVGD +VPLEGVIQF+KP+ +SSR SKWGRVALLAGGDV
Sbjct: 61  STKQAVSNSPSPPPFPTDQTVFVGDESVPLEGVIQFDKPN-TSSRLSKWGRVALLAGGDV 120

Query: 121 LALLLFSSIGRFSHGLPVLHFDTFRTADPFIAGWFLSAYFLGGYGDDGRALNGYSNALIA 180
           LALLLFSSIGRF+HG PV  F+T RTADPFIAGWFLSAYFLGGYG+DGR +NGYS A+IA
Sbjct: 121 LALLLFSSIGRFTHGFPVFDFETVRTADPFIAGWFLSAYFLGGYGEDGRGMNGYSKAVIA 180

Query: 181 ASKSWALGIPLGLIIRAATSGHIPSYNFIGVTMGSTAVLLIGWRAIRYKVFPIDNGKKNN 240
           ASKSWALGIPLGL++R ATSGH+P YNFIGVTMGSTAVLLIGWRAI YKVFP+DN KK++
Sbjct: 181 ASKSWALGIPLGLLVRVATSGHLPPYNFIGVTMGSTAVLLIGWRAILYKVFPVDNSKKSD 240

Query: 241 VYRRGNPFELFELLTSLVRRW 247
           VYRRGNPFELFELLTSLVRRW
Sbjct: 241 VYRRGNPFELFELLTSLVRRW 260

[Close]

BLAST of Sed0020426 vs. NCBI nr
Match: XP_022962620.1 (uncharacterized protein LOC111463015 [Cucurbita moschata] >KAG6598318.1 hypothetical protein SDJN03_08096, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029289.1 hypothetical protein SDJN02_07627 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 381.3 bits (978), Expect = 6.2e-102
Identity = 193/261 (73.95%), Postives = 219/261 (83.91%), Query Frame = 0


Query: 1   MLAVSQASAGVVPARRISVSALPCLQFSNPNP---KLTIPRTKPSKPLNLTLSKPQGTAD 60
           ML +SQA AGV+PAR+ S++ LP L+FSNPNP      IPR  P+KPLN+TLSK +GT D
Sbjct: 1   MLPLSQAPAGVLPARKFSLTTLPSLKFSNPNPFRRSKFIPRRNPAKPLNITLSKAEGTVD 60

Query: 61  SSLSA------------DQTVFVGDHNVPLEGVIQFEKPDASSSRFSKWGRVALLAGGDV 120
           S+  A            DQTVFVGD +VPLEGVIQF+KP+ +SSR SKWGRVALLAGGDV
Sbjct: 61  STKQAVSNSPSPPPFPTDQTVFVGDESVPLEGVIQFDKPN-TSSRLSKWGRVALLAGGDV 120

Query: 121 LALLLFSSIGRFSHGLPVLHFDTFRTADPFIAGWFLSAYFLGGYGDDGRALNGYSNALIA 180
           LALLLFSSIGRF+HG PV  F+T RTADPFIAGWFLSAYFLGGYG+DGR +NGYS A+IA
Sbjct: 121 LALLLFSSIGRFTHGFPVFDFETVRTADPFIAGWFLSAYFLGGYGEDGRGMNGYSKAVIA 180

Query: 181 ASKSWALGIPLGLIIRAATSGHIPSYNFIGVTMGSTAVLLIGWRAIRYKVFPIDNGKKNN 240
           ASKSWALGIPLGL++R ATSGH+P YNFIGVTMGSTAVLLIGWRAI YKVFP++N KK++
Sbjct: 181 ASKSWALGIPLGLLVRVATSGHLPPYNFIGVTMGSTAVLLIGWRAILYKVFPVNNSKKSD 240

Query: 241 VYRRGNPFELFELLTSLVRRW 247
           VYRRGNPFELFELLTSLVRRW
Sbjct: 241 VYRRGNPFELFELLTSLVRRW 260

[Close]

BLAST of Sed0020426 vs. ExPASy TrEMBL
Match: A0A1S3BB93 (uncharacterized protein LOC103487814 OS=Cucumis melo OX=3656 GN=LOC103487814 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 2.4e-104
Identity = 198/261 (75.86%), Postives = 219/261 (83.91%), Query Frame = 0


Query: 1   MLAVSQASAGVVPARRISVSALPCLQFSNPNP---KLTIPRTKPSKPLNLTLSKPQGTAD 60
           ML ++QA AGV+PARR S+S +P L+FSNPNP      IPR  P+KPLN+TLSK +GT D
Sbjct: 1   MLPLTQAPAGVLPARRFSLSTIPSLKFSNPNPFRRSKFIPRRNPTKPLNITLSKAEGTVD 60

Query: 61  SSLSA------------DQTVFVGDHNVPLEGVIQFEKPDASSSRFSKWGRVALLAGGDV 120
           S+  A            DQTVFVGD NVPLEGVIQF+KP+ +SSR SKWGRVALLAGGDV
Sbjct: 61  STKQALSNSPTPPPFPTDQTVFVGDENVPLEGVIQFDKPN-TSSRLSKWGRVALLAGGDV 120

Query: 121 LALLLFSSIGRFSHGLPVLHFDTFRTADPFIAGWFLSAYFLGGYGDDGRALNGYSNALIA 180
           LALLLFSSIGRFSHGLPV  F+T RTADPFIAGWFLSAYFLGGYGDDGR +NGYS A+IA
Sbjct: 121 LALLLFSSIGRFSHGLPVFDFETLRTADPFIAGWFLSAYFLGGYGDDGRGINGYSKAVIA 180

Query: 181 ASKSWALGIPLGLIIRAATSGHIPSYNFIGVTMGSTAVLLIGWRAIRYKVFPIDNGKKNN 240
           ASKSWALGIPLGL++RAATSG +P Y FIGVTMGSTAVLLIGWRAI YKVFP+ NGKKN+
Sbjct: 181 ASKSWALGIPLGLLVRAATSGRLPPYTFIGVTMGSTAVLLIGWRAILYKVFPVSNGKKND 240

Query: 241 VYRRGNPFELFELLTSLVRRW 247
           VYRRGNPFELFELLTSLVRRW
Sbjct: 241 VYRRGNPFELFELLTSLVRRW 260

[Close]

BLAST of Sed0020426 vs. ExPASy TrEMBL
Match: A0A0A0LKI7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354020 PE=4 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 1.2e-103
Identity = 194/261 (74.33%), Postives = 218/261 (83.52%), Query Frame = 0


Query: 1   MLAVSQASAGVVPARRISVSALPCLQFSNPNP---KLTIPRTKPSKPLNLTLSKPQGTAD 60
           ML +SQ  AGV+PARR+S+S +P L+FSNPNP      IPR  P+KP N+TLSK +GT D
Sbjct: 1   MLPLSQTPAGVLPARRLSLSTIPSLKFSNPNPFRRSKFIPRRNPTKPFNITLSKAEGTVD 60

Query: 61  SSLSA------------DQTVFVGDHNVPLEGVIQFEKPDASSSRFSKWGRVALLAGGDV 120
           S+  A            DQTVFVGD NVPLEGVIQF+KP+ +SSR +KWGRVA LAGGDV
Sbjct: 61  STKQALSNSPTPPPFPNDQTVFVGDENVPLEGVIQFDKPN-TSSRLTKWGRVAFLAGGDV 120

Query: 121 LALLLFSSIGRFSHGLPVLHFDTFRTADPFIAGWFLSAYFLGGYGDDGRALNGYSNALIA 180
           LALLLFSSIGRFSHGLPV  F+T RTADPFIAGWFLSAYFLGGYGDDGR +NGYS A++A
Sbjct: 121 LALLLFSSIGRFSHGLPVFDFETLRTADPFIAGWFLSAYFLGGYGDDGRGINGYSKAVVA 180

Query: 181 ASKSWALGIPLGLIIRAATSGHIPSYNFIGVTMGSTAVLLIGWRAIRYKVFPIDNGKKNN 240
           A+KSWALGIPLGL++RAATSGH+P YNFIGVTMGSTAVLLIGWRAI YKVFP+ N KKN+
Sbjct: 181 ATKSWALGIPLGLLVRAATSGHLPPYNFIGVTMGSTAVLLIGWRAILYKVFPVSNSKKND 240

Query: 241 VYRRGNPFELFELLTSLVRRW 247
           VYRRGNPFELFELLTSLVRRW
Sbjct: 241 VYRRGNPFELFELLTSLVRRW 260

[Close]

BLAST of Sed0020426 vs. ExPASy TrEMBL
Match: A0A6J1HFL9 (uncharacterized protein LOC111463015 OS=Cucurbita moschata OX=3662 GN=LOC111463015 PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 3.0e-102
Identity = 193/261 (73.95%), Postives = 219/261 (83.91%), Query Frame = 0


Query: 1   MLAVSQASAGVVPARRISVSALPCLQFSNPNP---KLTIPRTKPSKPLNLTLSKPQGTAD 60
           ML +SQA AGV+PAR+ S++ LP L+FSNPNP      IPR  P+KPLN+TLSK +GT D
Sbjct: 1   MLPLSQAPAGVLPARKFSLTTLPSLKFSNPNPFRRSKFIPRRNPAKPLNITLSKAEGTVD 60

Query: 61  SSLSA------------DQTVFVGDHNVPLEGVIQFEKPDASSSRFSKWGRVALLAGGDV 120
           S+  A            DQTVFVGD +VPLEGVIQF+KP+ +SSR SKWGRVALLAGGDV
Sbjct: 61  STKQAVSNSPSPPPFPTDQTVFVGDESVPLEGVIQFDKPN-TSSRLSKWGRVALLAGGDV 120

Query: 121 LALLLFSSIGRFSHGLPVLHFDTFRTADPFIAGWFLSAYFLGGYGDDGRALNGYSNALIA 180
           LALLLFSSIGRF+HG PV  F+T RTADPFIAGWFLSAYFLGGYG+DGR +NGYS A+IA
Sbjct: 121 LALLLFSSIGRFTHGFPVFDFETVRTADPFIAGWFLSAYFLGGYGEDGRGMNGYSKAVIA 180

Query: 181 ASKSWALGIPLGLIIRAATSGHIPSYNFIGVTMGSTAVLLIGWRAIRYKVFPIDNGKKNN 240
           ASKSWALGIPLGL++R ATSGH+P YNFIGVTMGSTAVLLIGWRAI YKVFP++N KK++
Sbjct: 181 ASKSWALGIPLGLLVRVATSGHLPPYNFIGVTMGSTAVLLIGWRAILYKVFPVNNSKKSD 240

Query: 241 VYRRGNPFELFELLTSLVRRW 247
           VYRRGNPFELFELLTSLVRRW
Sbjct: 241 VYRRGNPFELFELLTSLVRRW 260

[Close]

BLAST of Sed0020426 vs. ExPASy TrEMBL
Match: A0A6J1BRR3 (uncharacterized protein LOC111005110 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005110 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 5.1e-102
Identity = 196/261 (75.10%), Postives = 216/261 (82.76%), Query Frame = 0


Query: 1   MLAVSQASAGVVPARRISVSALPCLQFSNPNP---KLTIPRTKPSKPLNLTLSKPQGTAD 60
           ML +SQA AGV+PARR S+S  P L+FSNPNP      IPR  P+KPLN++LSK +G+ D
Sbjct: 1   MLPLSQAPAGVLPARRFSLSTPPALKFSNPNPFRRSKFIPRRNPAKPLNISLSKAEGSVD 60

Query: 61  SSLSA------------DQTVFVGDHNVPLEGVIQFEKPDASSSRFSKWGRVALLAGGDV 120
           S+  A            DQTVFVGD NVPLEGVIQF+KPD +SSR SKWGRVALLAGGDV
Sbjct: 61  STKQALSTSPTPPPFPTDQTVFVGDENVPLEGVIQFDKPD-TSSRLSKWGRVALLAGGDV 120

Query: 121 LALLLFSSIGRFSHGLPVLHFDTFRTADPFIAGWFLSAYFLGGYGDDGRALNGYSNALIA 180
           LALLLFSSIGRFSHG PV  F+T RTADPFIAGWFLSAYFLGGYG+DGR +NGYS A+IA
Sbjct: 121 LALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGINGYSKAVIA 180

Query: 181 ASKSWALGIPLGLIIRAATSGHIPSYNFIGVTMGSTAVLLIGWRAIRYKVFPIDNGKKNN 240
            SKSWALGIPLGLIIRAATSGH+P YNFIGVTMGSTAVLLIGWRAI YKVFP +  KKN+
Sbjct: 181 TSKSWALGIPLGLIIRAATSGHLPPYNFIGVTMGSTAVLLIGWRAILYKVFPANASKKND 240

Query: 241 VYRRGNPFELFELLTSLVRRW 247
           VY+RGNPFELFELLTSLVRRW
Sbjct: 241 VYQRGNPFELFELLTSLVRRW 260

[Close]

BLAST of Sed0020426 vs. ExPASy TrEMBL
Match: A0A6J1K997 (uncharacterized protein LOC111492268 OS=Cucurbita maxima OX=3661 GN=LOC111492268 PE=4 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 4.3e-101
Identity = 192/261 (73.56%), Postives = 218/261 (83.52%), Query Frame = 0


Query: 1   MLAVSQASAGVVPARRISVSALPCLQFSNPNP---KLTIPRTKPSKPLNLTLSKPQGTAD 60
           ML +SQA AGV+PAR+ S++ LP L+FSNPNP      IPR  PSKPLN+TLSK +GT D
Sbjct: 1   MLPLSQAPAGVLPARKFSLTTLPSLKFSNPNPFRRSKFIPRRNPSKPLNITLSKAEGTVD 60

Query: 61  SSLSA------------DQTVFVGDHNVPLEGVIQFEKPDASSSRFSKWGRVALLAGGDV 120
           S+  A            DQTVFVGD +VPLEGVI+F+KP+ +SSR SKWGRVALLAGGDV
Sbjct: 61  STKQAVSNSPSPPPFPTDQTVFVGDESVPLEGVIRFDKPN-TSSRLSKWGRVALLAGGDV 120

Query: 121 LALLLFSSIGRFSHGLPVLHFDTFRTADPFIAGWFLSAYFLGGYGDDGRALNGYSNALIA 180
           LALLLFSSIGRF+HG PV  F+T RTADPFIAGWFLSAYFLGGYG+DGR +NGYS A+IA
Sbjct: 121 LALLLFSSIGRFTHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGMNGYSKAVIA 180

Query: 181 ASKSWALGIPLGLIIRAATSGHIPSYNFIGVTMGSTAVLLIGWRAIRYKVFPIDNGKKNN 240
           ASKSWALGIPLGL++R ATSGH+  YNFIGVTMGSTAVLLIGWRAI YKVFP++N KK++
Sbjct: 181 ASKSWALGIPLGLLVRVATSGHLLPYNFIGVTMGSTAVLLIGWRAILYKVFPVNNSKKSD 240

Query: 241 VYRRGNPFELFELLTSLVRRW 247
           VYRRGNPFELFELLTSLVRRW
Sbjct: 241 VYRRGNPFELFELLTSLVRRW 260

[Close]

BLAST of Sed0020426 vs. TAIR 10
Match: AT1G44920.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3054 (InterPro:IPR021414); Has 246 Blast hits to 246 proteins in 119 species: Archae - 14; Bacteria - 181; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). )

HSP 1 Score: 285.8 bits (730), Expect = 3.3e-77
Identity = 151/257 (58.75%), Postives = 188/257 (73.15%), Query Frame = 0


Query: 2   LAVSQASAGVVPARRISVSALPCLQFSNPNP-KLTIPRTKPSKP-LNLTLSKPQGTADSS 61
           + V +   G V A R    + P   FS+P+   L  P T  S+P + L LS P G+ +S 
Sbjct: 3   MLVLRTPTGPVSAVRFITKSKPS-PFSSPDSWLLPAPNTHRSRPRVVLALSNPDGSVNSK 62

Query: 62  ---------LSADQTVFVGDHNVPLEGVIQFEKPDA-SSSRFSKWGRVALLAGGDVLALL 121
                     S D+TVFVG  NVPLEGVIQF+KP + SSS  +KWGRVALLAGGDVLALL
Sbjct: 63  PSTSASQIPSSGDETVFVGQDNVPLEGVIQFDKPSSTSSSNITKWGRVALLAGGDVLALL 122

Query: 122 LFSSIGRFSHGLPVLHFDTFRTADPFIAGWFLSAYFLGGYGDDGRALNGYSNALIAASKS 181
           +FS+IGRFSHG PV   DT  TADPFIAGWFLSAYFLGGY ++GR + G S A++AA+KS
Sbjct: 123 IFSAIGRFSHGFPVFSLDTLHTADPFIAGWFLSAYFLGGYAEEGRGMKGKSKAVVAAAKS 182

Query: 182 WALGIPLGLIIRAATSGHIPSYNFIGVTMGSTAVLLIGWRAIRYKVFPIDNGKKNNVYRR 241
           W +G PLG+IIR+A+SGHIP+Y+F+ VTMGSTAVLLIGWRA+ + V P ++ KK++ YR+
Sbjct: 183 WIVGTPLGIIIRSASSGHIPAYSFVLVTMGSTAVLLIGWRALLFSVLPTESKKKDDTYRK 242

Query: 242 GNPFELFELLTSLVRRW 247
           G+ FELFELLTSL+RRW
Sbjct: 243 GSAFELFELLTSLIRRW 258

The following BLAST results are available for this feature:

BLAST of Sed0020426 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008444522.1	5.0e-104	75.86	PREDICTED: uncharacterized protein LOC103487814 [Cucumis melo]	[more]
XP_004142905.1	2.5e-103	74.33	uncharacterized protein LOC101212562 [Cucumis sativus] >KGN62425.1 hypothetical ...	[more]
XP_038883997.1	1.2e-102	75.86	uncharacterized protein LOC120074958 [Benincasa hispida]	[more]
XP_023545360.1	1.6e-102	74.33	uncharacterized protein LOC111804800 [Cucurbita pepo subsp. pepo]	[more]
XP_022962620.1	6.2e-102	73.95	uncharacterized protein LOC111463015 [Cucurbita moschata] >KAG6598318.1 hypothet...	[more]

BLAST of Sed0020426 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0020426 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BB93	2.4e-104	75.86	uncharacterized protein LOC103487814 OS=Cucumis melo OX=3656 GN=LOC103487814 PE=...	[more]
A0A0A0LKI7	1.2e-103	74.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354020 PE=4 SV=1	[more]
A0A6J1HFL9	3.0e-102	73.95	uncharacterized protein LOC111463015 OS=Cucurbita moschata OX=3662 GN=LOC1114630...	[more]
A0A6J1BRR3	5.1e-102	75.10	uncharacterized protein LOC111005110 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1K997	4.3e-101	73.56	uncharacterized protein LOC111492268 OS=Cucurbita maxima OX=3661 GN=LOC111492268...	[more]

BLAST of Sed0020426 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G44920.1	3.3e-77	58.75	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021414	Protein of unknown function DUF3054	PFAM	PF11255	DUF3054	coord: 102..177 e-value: 7.1E-11 score: 42.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..58
None	No IPR available	PANTHER	PTHR35283	T12C22.21 PROTEIN	coord: 1..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0020426.1	Sed0020426.1	mRNA
Sed0020426.2	Sed0020426.2	mRNA
Sed0020426.3	Sed0020426.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane