Sed0020411 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACTTTCCCAAAATACCCTCCACAGCACCAATAACTTAAAAAAAGGATTGTTTCAACTTTCCCAAAATACCCTCCACTCACCAATAATTGAAAAAATAAAGCTTCCCAATAAAATCCTGCCACGTCATTACCCTACTTCCCTTGACTCATTCCCCCCTACTATTATTTCCCTAATATCCTCATCTCCGTCTAGTTTCCTCCACATACTGAAATTTCAACGCTTCTGAATCTGAAACTTCCCTTGAATTTTCATCGCAATTCATTCGATTACTCGGTAGATTTCGTTTCTCTTTGATTTTATTTTGATTATTTAGCTCCATTTCTCATTTTCTTGTTCAATTTGGCGCCCTATGTTGGAGATTCCGGCGCTGTTTATCTGTAGGTGTTAAAAATTCGTAGATCTAACTCATATTTGTTGTATTTTTGTGTATTCGTTTAGATATCTGTTTGATTTCTCGTAAAATTAGGTTTAGATCTCCACGCTTGTTCTTTTTGTAAGCGATTCGCTTCTTGGAAGTTCTTATGGATCTCTGAGGTTTACGATCTTTATGCCATGTTTGCGATTGTAGTGATATGTTAAGTTGATTATAAACGAGATCTGAAGACTTCATGTCTGAAACAGCTCTGTTTCTATCCTTGGATCTCTGTGATTCGTGAAAAGGATGTACTCTATGAGGTTCAATTTCATGTTAGTGGATTGGATCTCTGCAGAGCAGAACTACATATGGCAAATTCATGGTAAATTGGTTGTTATTATTCTTTTTTGCTGCTGTGTTTTATATTGGATCTGTAGATCTATGTTGATGTTTGAGATTTGTGATAGGAGGATTCTCAGTTTGTTTCCTCTGATTTTGTATGTGAAACTAATGAGATTAATGAGATTACTAAGATCTTTTGTAATTATATATTTGGTCTCATTGGAACCCTTACCTTTAGCCAAGTTCCCAAGTTCCTTTTGTGGGCTTCGGTATTTTTTGGATGTCCTTGTATTTTTTCATCAAGAAATCTTTTTCGAGTGAACGCTTGGTTTCATATAACAAGGAATCGTTTTGATGCTTTGCAAATCCTGAAAATAATTAATTTTGACTTTTCCTTCTCTCCTTCCCTATTGCTAAAAAATCTGGAATTCGACGACTGTGACCTTGCTTAAAGGTTTAGACTTTATGCCTAGAATATATTCTATGCATATTTACAGTGAAAATTTTCAGTAGAGATTTCCTGTTGTTGATTGTTTAGGAAAATTTCAAACTCAATGTCCTAAAAAATGAGCTACACTACATCAGGTACCCTCGGGTATAAGGGAGCAAAGCTCCAACTTCTCGGTTATAAAATAATGAGCTCACATGTACTTGAAACTCTAATATATGCTGATCATTAATGTTATATTTCCTAGTGTGAAAATAAGGTGGAAGCATTCTACCTCTTCTGGTCGTTGATTTGTACCTTATTGTGGGGTTTGATATTCTTTGCAGTATAGCATCCTGAGCTCATAGTTACCCCAGTTCACAAAAATGGGCCGTCCACAGGAACCAAACAGGCAATTCTTCCCCTTTGGGAACCCTTTTCGGATGATATCTCCGAAAGGTTCGAATTTGCCTTCAAACCTTGTTGCAATATTGAATTCTTTTGAGAGAAGCCTAGCTGGAAGACTAAGAAAGCTCCATCCATCTAGTGAAGATGACGTTCTTAGCCTTTCATGGATGAAATTAGCAATGGAGTTGCTTTGTGAATCACACAGTGATGTTAAAACTCTTATCAAGGAGTTAGAGCTTCCCGTGCTCGACTGGAATGAGAAGTGGATTGATGTCTATTTGGACATCAGTGTGAAACTGCTTGACGTGTGTAATGCTATTAGCTCAGAGCTTTCACACTTGAACCAAAGCAACCTCATGCTCCGATGCATCACCCATAATTTGGATTCTGCTGAGTCAAAGCGACTCTCTCAAGCACGTGTTTCCTTGGATGTATGGAGACTGAACATAAGCTCCACTAATTCTAGAATAAAAAATTGTTGTGGAATCTTAGACAGCCTTGTAGAATCACTTGATCTTCCAAAAGTAAAGAATTCAGCCAAAGGTAAGGTTCTGATGCGTGCTTTATACGGTGTGAAGGTGCTGACAGTTTTTGTGTATAGTGTCTTTGCCTCAGCCTTCTTAGGCTCACCAAAACTCTTTGATCTGAACATTGCTGATACATATTCATGGGGACAAACTTTCTCCTCCCTTCAAAATTATGTAAATAGTGAAATTAGGTGTACATACTCAAGTGGAAAATTAACCCCTCTGAAGGAACTTGAAGCTATCGAACAATGTGCCGCCAATCTTCATCAAACAATCCCGGAGAATCCAGAGGTTGAAAAAGTTCAACCGCTGAAGAACATCGTATCTGAGTTGGGTGGAAAGGCAGAGAAACTATCCGAAGGTCTTCATTTGCTAACGAAGGAAGTCGACAACTTTTTCCAGATCGTTTTGGAAGGGCGTGACGCTTTGTTATCGAAGCTGAGGGGTTGCTAAATCACTTGGAGCAAAACTTTGAACTTGTGTACAGGGATGGGTTTGTCTCTCTTGTGTTTCAACTAAAGTAGCCATAGTGTAGTGTAGTAGTGCAGTCTTTACATATTTCCTACAGCTTTTGGGTTGTATTTCTCTAATAAGGTGTGTGTGTGTGTGTAAGATTGAATATTGAAATGGAAATATGTTATATGGAGTGTCTATATCTGAGCAAATAGCTTCTCTATCATATCCTGCTTCTGAGTTATAATGATTTAAATAATTGAATTTTTTGCACAACCAGATTTGGAGGATGGAGGATGGAGGATGCTGATTTGAATGGGGAGCCTATATATAAGATCTATTCGGCTTTTGTAAGTAGGCTGCTTTGTAGCCCATCTTTATATGTTTATTTTGATTGGATTAATGCTCATTTAGAATAGTAGAAGATTATTCACCAATAATGCTCATTTAGGCTGTTTATTTGTAGCCCATCTAAGGAATGACTCATGGAGAACGGAGGAACGAATCTCTTTCAATATTCCATGGTAATTTCTCTATATCTAGTTCTACACCTTGTGTTTACAACCAACCAATAATAATCAGTTAAAAACCACACTATCATGTATGAACCTAATTACAATCAAAACGTCAAAGTTGCAAATTCATCTACCCAAATGTGGGGTGGGCTACTTTACAAACGGCCCCTAAAAATCTAACATTACCCATTCATCAAGAATCGTATGCACATTTTTCTCTAATCATTAACCAAATTCACCTGTGGATCGTATTTTGGTTCTTTGATCACTCAAGCAATGAAAAGGGTGATCATTTTTGCATTGCTACCAATACCCATATCAAAAGTGATGGTTAAGGAAGCACAAACACTTCTATTTTGACAAAGTACCCGTGTCGGATACGTGTCTGCACCAATATTTTCGGACACTCTTCGGACATATATCTGACATCCGAAATTTCGTGTACTCCCTTATTATTATTATTTTTAATTTCCTACGTACACTTTATGGGCACACCATGACCAGTTCATGGATACCTCATTCAAGACATTATTTGTTTCAAATGATCGATGATACGACAACACAACGATTAGTAGTATGGGTGGAGTTCATAAATGACAATGTCCATAAAAGATAGATGGATT ACTTTCCCAAAATACCCTCCACAGCACCAATAACTTAAAAAAAGGATTGTTTCAACTTTCCCAAAATACCCTCCACTCACCAATAATTGAAAAAATAAAGCTTCCCAATAAAATCCTGCCACGTCATTACCCTACTTCCCTTGACTCATTCCCCCCTACTATTATTTCCCTAATATCCTCATCTCCGTCTAGTTTCCTCCACATACTGAAATTTCAACGCTTCTGAATCTGAAACTTCCCTTGAATTTTCATCGCAATTCATTCGATTACTCGTGATATGTTAAGTTGATTATAAACGAGATCTGAAGACTTCATGTCTGAAACAGCTCTGTTTCTATCCTTGGATCTCTGTGATTCGTGAAAAGGATGTACTCTATGAGGTTCAATTTCATGTTAGTGGATTGGATCTCTGCAGAGCAGAACTACATATGGCAAATTCATGTATAGCATCCTGAGCTCATAGTTACCCCAGTTCACAAAAATGGGCCGTCCACAGGAACCAAACAGGCAATTCTTCCCCTTTGGGAACCCTTTTCGGATGATATCTCCGAAAGGTTCGAATTTGCCTTCAAACCTTGTTGCAATATTGAATTCTTTTGAGAGAAGCCTAGCTGGAAGACTAAGAAAGCTCCATCCATCTAGTGAAGATGACGTTCTTAGCCTTTCATGGATGAAATTAGCAATGGAGTTGCTTTGTGAATCACACAGTGATGTTAAAACTCTTATCAAGGAGTTAGAGCTTCCCGTGCTCGACTGGAATGAGAAGTGGATTGATGTCTATTTGGACATCAGTGTGAAACTGCTTGACGTGTGTAATGCTATTAGCTCAGAGCTTTCACACTTGAACCAAAGCAACCTCATGCTCCGATGCATCACCCATAATTTGGATTCTGCTGAGTCAAAGCGACTCTCTCAAGCACGTGTTTCCTTGGATGTATGGAGACTGAACATAAGCTCCACTAATTCTAGAATAAAAAATTGTTGTGGAATCTTAGACAGCCTTGTAGAATCACTTGATCTTCCAAAAGTAAAGAATTCAGCCAAAGGTAAGGTTCTGATGCGTGCTTTATACGGTGTGAAGGTGCTGACAGTTTTTGTGTATAGTGTCTTTGCCTCAGCCTTCTTAGGCTCACCAAAACTCTTTGATCTGAACATTGCTGATACATATTCATGGGGACAAACTTTCTCCTCCCTTCAAAATTATGTAAATAGTGAAATTAGGTGTACATACTCAAGTGGAAAATTAACCCCTCTGAAGGAACTTGAAGCTATCGAACAATGTGCCGCCAATCTTCATCAAACAATCCCGGAGAATCCAGAGGTTGAAAAAGTTCAACCGCTGAAGAACATCGTATCTGAGTTGGGTGGAAAGGCAGAGAAACTATCCGAAGGTCTTCATTTGCTAACGAAGGAAGTCGACAACTTTTTCCAGATCGTTTTGGAAGGGCGTGACGCTTTGTTATCGAAGCTGAGGGGTTGCTAAATCACTTGGAGCAAAACTTTGAACTTGTGTACAGGGATGGGTTTGTCTCTCTTGTGTTTCAACTAAAGTAGCCATAGTGTAGTGTAGTAGTGCAGTCTTTACATATTTCCTACAGCTTTTGGGTTGTATTTCTCTAATAAGGTGTGTGTGTGTGTGTAAGATTGAATATTGAAATGGAAATATGTTATATGGAGTGTCTATATCTGAGCAAATAGCTTCTCTATCATATCCTGCTTCTGAGTTATAATGATTTAAATAATTGAATTTTTTGCACAACCAGATTTGGAGGATGGAGGATGGAGGATGCTGATTTGAATGGGGAGCCTATATATAAGATCTATTCGGCTTTTCCCATCTAAGGAATGACTCATGGAGAACGGAGGAACGAATCTCTTTCAATATTCCATGGTAATTTCTCTATATCTAGTTCTACACCTTGTGTTTACAACCAACCAATAATAATCAGTTAAAAACCACACTATCATGTATGAACCTAATTACAATCAAAACGTCAAAGTTGCAAATTCATCTACCCAAATGTGGGGTGGGCTACTTTACAAACGGCCCCTAAAAATCTAACATTACCCATTCATCAAGAATCGTATGCACATTTTTCTCTAATCATTAACCAAATTCACCTGTGGATCGTATTTTGGTTCTTTGATCACTCAAGCAATGAAAAGGGTGATCATTTTTGCATTGCTACCAATACCCATATCAAAAGTGATGGTTAAGGAAGCACAAACACTTCTATTTTGACAAAGTACCCGTGTCGGATACGTGTCTGCACCAATATTTTCGGACACTCTTCGGACATATATCTGACATCCGAAATTTCGTGTACTCCCTTATTATTATTATTTTTAATTTCCTACGTACACTTTATGGGCACACCATGACCAGTTCATGGATACCTCATTCAAGACATTATTTGTTTCAAATGATCGATGATACGACAACACAACGATTAGTAGTATGGGTGGAGTTCATAAATGACAATGTCCATAAAAGATAGATGGATT ATGGGCCGTCCACAGGAACCAAACAGGCAATTCTTCCCCTTTGGGAACCCTTTTCGGATGATATCTCCGAAAGGTTCGAATTTGCCTTCAAACCTTGTTGCAATATTGAATTCTTTTGAGAGAAGCCTAGCTGGAAGACTAAGAAAGCTCCATCCATCTAGTGAAGATGACGTTCTTAGCCTTTCATGGATGAAATTAGCAATGGAGTTGCTTTGTGAATCACACAGTGATGTTAAAACTCTTATCAAGGAGTTAGAGCTTCCCGTGCTCGACTGGAATGAGAAGTGGATTGATGTCTATTTGGACATCAGTGTGAAACTGCTTGACGTGTGTAATGCTATTAGCTCAGAGCTTTCACACTTGAACCAAAGCAACCTCATGCTCCGATGCATCACCCATAATTTGGATTCTGCTGAGTCAAAGCGACTCTCTCAAGCACGTGTTTCCTTGGATGTATGGAGACTGAACATAAGCTCCACTAATTCTAGAATAAAAAATTGTTGTGGAATCTTAGACAGCCTTGTAGAATCACTTGATCTTCCAAAAGTAAAGAATTCAGCCAAAGGTAAGGTTCTGATGCGTGCTTTATACGGTGTGAAGGTGCTGACAGTTTTTGTGTATAGTGTCTTTGCCTCAGCCTTCTTAGGCTCACCAAAACTCTTTGATCTGAACATTGCTGATACATATTCATGGGGACAAACTTTCTCCTCCCTTCAAAATTATGTAAATAGTGAAATTAGGTGTACATACTCAAGTGGAAAATTAACCCCTCTGAAGGAACTTGAAGCTATCGAACAATGTGCCGCCAATCTTCATCAAACAATCCCGGAGAATCCAGAGGTTGAAAAAGTTCAACCGCTGAAGAACATCGTATCTGAGTTGGGTGGAAAGGCAGAGAAACTATCCGAAGGTCTTCATTTGCTAACGAAGGAAGTCGACAACTTTTTCCAGATCGTTTTGGAAGGGCGTGACGCTTTGTTATCGAAGCTGAGGGGTTGCTAA MGRPQEPNRQFFPFGNPFRMISPKGSNLPSNLVAILNSFERSLAGRLRKLHPSSEDDVLSLSWMKLAMELLCESHSDVKTLIKELELPVLDWNEKWIDVYLDISVKLLDVCNAISSELSHLNQSNLMLRCITHNLDSAESKRLSQARVSLDVWRLNISSTNSRIKNCCGILDSLVESLDLPKVKNSAKGKVLMRALYGVKVLTVFVYSVFASAFLGSPKLFDLNIADTYSWGQTFSSLQNYVNSEIRCTYSSGKLTPLKELEAIEQCAANLHQTIPENPEVEKVQPLKNIVSELGGKAEKLSEGLHLLTKEVDNFFQIVLEGRDALLSKLRGC Homology
BLAST of Sed0020411 vs. NCBI nr
Match: XP_038874452.1 (protein BPS1, chloroplastic [Benincasa hispida] >XP_038874453.1 protein BPS1, chloroplastic [Benincasa hispida] >XP_038874455.1 protein BPS1, chloroplastic [Benincasa hispida]) HSP 1 Score: 568.2 bits (1463), Expect = 4.8e-158 Identity = 290/333 (87.09%), Postives = 306/333 (91.89%), Query Frame = 0
BLAST of Sed0020411 vs. NCBI nr
Match: XP_022147201.1 (protein BPS1, chloroplastic [Momordica charantia] >XP_022147202.1 protein BPS1, chloroplastic [Momordica charantia] >XP_022147204.1 protein BPS1, chloroplastic [Momordica charantia]) HSP 1 Score: 562.0 bits (1447), Expect = 3.4e-156 Identity = 283/333 (84.98%), Postives = 301/333 (90.39%), Query Frame = 0
BLAST of Sed0020411 vs. NCBI nr
Match: XP_023000267.1 (protein BPS1, chloroplastic-like [Cucurbita maxima] >XP_023000268.1 protein BPS1, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 559.3 bits (1440), Expect = 2.2e-155 Identity = 284/332 (85.54%), Postives = 303/332 (91.27%), Query Frame = 0
BLAST of Sed0020411 vs. NCBI nr
Match: XP_023514376.1 (protein BPS1, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023514377.1 protein BPS1, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 557.8 bits (1436), Expect = 6.5e-155 Identity = 284/331 (85.80%), Postives = 302/331 (91.24%), Query Frame = 0
BLAST of Sed0020411 vs. NCBI nr
Match: XP_022959168.1 (protein BPS1, chloroplastic-like [Cucurbita moschata] >XP_022959169.1 protein BPS1, chloroplastic-like [Cucurbita moschata] >XP_022959170.1 protein BPS1, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 557.4 bits (1435), Expect = 8.5e-155 Identity = 283/331 (85.50%), Postives = 299/331 (90.33%), Query Frame = 0
BLAST of Sed0020411 vs. ExPASy Swiss-Prot
Match: Q9LMM6 (Protein BPS1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BPS1 PE=2 SV=1) HSP 1 Score: 334.3 bits (856), Expect = 1.5e-90 Identity = 178/333 (53.45%), Postives = 238/333 (71.47%), Query Frame = 0
BLAST of Sed0020411 vs. ExPASy Swiss-Prot
Match: Q337C0 (UPF0496 protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0513300 PE=2 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 1.0e-62 Identity = 133/297 (44.78%), Postives = 185/297 (62.29%), Query Frame = 0
BLAST of Sed0020411 vs. ExPASy Swiss-Prot
Match: A2Z9A6 (UPF0496 protein 4 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_033149 PE=3 SV=2) HSP 1 Score: 238.4 bits (607), Expect = 1.1e-61 Identity = 131/297 (44.11%), Postives = 183/297 (61.62%), Query Frame = 0
BLAST of Sed0020411 vs. ExPASy TrEMBL
Match: A0A6J1D0B6 (protein BPS1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111016210 PE=4 SV=1) HSP 1 Score: 562.0 bits (1447), Expect = 1.7e-156 Identity = 283/333 (84.98%), Postives = 301/333 (90.39%), Query Frame = 0
BLAST of Sed0020411 vs. ExPASy TrEMBL
Match: A0A6J1KM61 (protein BPS1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111494547 PE=4 SV=1) HSP 1 Score: 559.3 bits (1440), Expect = 1.1e-155 Identity = 284/332 (85.54%), Postives = 303/332 (91.27%), Query Frame = 0
BLAST of Sed0020411 vs. ExPASy TrEMBL
Match: A0A6J1H565 (protein BPS1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111460240 PE=4 SV=1) HSP 1 Score: 557.4 bits (1435), Expect = 4.1e-155 Identity = 283/331 (85.50%), Postives = 299/331 (90.33%), Query Frame = 0
BLAST of Sed0020411 vs. ExPASy TrEMBL
Match: A0A6J1L5F0 (protein BPS1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111499286 PE=4 SV=1) HSP 1 Score: 556.2 bits (1432), Expect = 9.2e-155 Identity = 283/331 (85.50%), Postives = 300/331 (90.63%), Query Frame = 0
BLAST of Sed0020411 vs. ExPASy TrEMBL
Match: A0A6J1HIM9 (protein BPS1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111464379 PE=4 SV=1) HSP 1 Score: 555.8 bits (1431), Expect = 1.2e-154 Identity = 284/332 (85.54%), Postives = 301/332 (90.66%), Query Frame = 0
BLAST of Sed0020411 vs. TAIR 10
Match: AT2G46080.1 (CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF793) (TAIR:AT1G01550.2); Has 153 Blast hits to 139 proteins in 20 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 150; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 364.0 bits (933), Expect = 1.3e-100 Identity = 185/332 (55.72%), Postives = 246/332 (74.10%), Query Frame = 0
BLAST of Sed0020411 vs. TAIR 10
Match: AT1G01550.1 (Protein of unknown function (DUF793) ) HSP 1 Score: 334.3 bits (856), Expect = 1.1e-91 Identity = 178/333 (53.45%), Postives = 238/333 (71.47%), Query Frame = 0
BLAST of Sed0020411 vs. TAIR 10
Match: AT1G01550.2 (Protein of unknown function (DUF793) ) HSP 1 Score: 334.3 bits (856), Expect = 1.1e-91 Identity = 178/333 (53.45%), Postives = 238/333 (71.47%), Query Frame = 0
BLAST of Sed0020411 vs. TAIR 10
Match: AT4G01360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF793) (TAIR:AT1G01550.2); Has 99 Blast hits to 99 proteins in 25 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 197.2 bits (500), Expect = 2.1e-50 Identity = 126/329 (38.30%), Postives = 193/329 (58.66%), Query Frame = 0
BLAST of Sed0020411 vs. TAIR 10
Match: AT3G61500.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46080.1); Has 90 Blast hits to 90 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 112.5 bits (280), Expect = 6.7e-25 Identity = 67/167 (40.12%), Postives = 100/167 (59.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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