Sed0020350 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTTTAGGGTCCCCTGTTTTTGCTCTCACTCCCAATGGAGCCCTTCCCATGTTCTTCCTCCGCCCTGCTCGCCGATTATTTGACCCCCACCACCGCTTCCATCCCCTGGACCCGCCACGAGGATAAGATTTTCGAGCACGCTCTGGTGGTGCTGCCGGAGAGCTCTCCCCACCGCTGGATCAACATCGCCGATCTTGTTCAGGGCAAATCGCCGGCCGACGTTAGGGACCACTACCATGCCTTGGTTTCTGGCGTGCTGGAGATCGAGTCTGGACGAGTTGAGTTGCCGAGTTATGGCGATGACTCGGGGTTGAGTTCGCCGGAGTCGGAGAAAACGGCGGAGAGGAAGAAGGGGAAGCCTTGGACCAAAAAGGAACACCAGTATGTTTGTTTGCTTTAACCTTTTCTTTTCTCTTTGATTAAACTTTTAAATTTCTCTCAATAAAATCTATGTGAGTGTTTCATTGATTTTAGATTATGCCTATAAAAAATGTGCTGCAAATAATTCGGGATAAAATATAAGTTTAGTCCTCATTTAAAAAAACCAGAGTTTAATTTTTATGTTAAAAAAACAGAGTTTAAATTCTCAAAATATATATATATAATAAAAACAGAGTTTAATTTTTATGATTTAGACTCTATTTTTTTAAAATAACAATTTAGTTTAATAAGAGTTTCTTATAATTAAAGTTAATTATTTAATTATTTATGTATTATTGATGAAATTATGAATTAAGTAATTAATATAATAATAATAAAAAAATCATACCAAGTATGAATATTGAACTTTCATGTATTTAATATGTCAGCGATTATATAAGATAAGAATTATTCTTCAAGTTTTATAAAATTAAAGTGACTAAATTTAAATTTTTTAAATTACACCGATTAATTTTAATTTTCTTCAAATTATAAAGAATAAACTCTAGTTTTTTAAATTATGAGAATTAAAATGTAACCTTTTTTTTTAACCATAGACACTGAATTTATATTTTATCCAAATTATTGAATAAAACTATTTGAAGCATTTGATAATTTATGAAACTATTTTAATTTTAAATTGGTACTTCAATGATAATTTTTTTGTTCATTTATGAGTTATTTTAATTTTAAATAGGTGCTTAAATGTTCAATTTCAATTGATTTCTATTAAAATTAACTTGCACATAATTTTTAAGTGGGGAATTGAGATGTTCATAAACCTAATTGGTAAAATAGAAACAAACAACTGCAAATCAATAACCAATAAAAGTCATAAATAATATAGATATCATTTATGATATAAAAGGTTGTGAATTTGAATTTGGCAAATGTTTATTGAACTCACAAAATGATCTAAATAAGTACAACATAATATAAATTAATGATCAAATGTATATTTTCATTTTTCTATATCCAAAATGTCAATCCTCATTCTTTAATTTGAGTTGAATTTTAATAATTAAGAAGATATAAATTTAAATTTTCTATCCATAACTATTAAACTAAAATAAATAAATAGACTTAAAAAACATTATTCTAAAGTTAAGAGAGGTATATATTTGATATTATTTTTCTTAATCTAATTAGAAGAAAAATTTTAACCAACACCAAATCGGAAAAAAAAAAAAACAAGCAAAACAAAAAACCCAAGTTTTACCATGGAAAATCTCATATTAAAAAAGTGCAAATCTTCTGGTTATTATTATTTTTTTTTAAAATTTATATCATATATAAAATATTTTTTATATTAATAATTAATTTTGAGTTACTATTTAATATGAAATATCAAAATTCATTTTTAGTCAAATAAAAATGAAATTAAGATGGAATCCCAAAACAATGAACCAAGACACTATGTTGAGTTGTCAATTAATTTTATGTTAAAATACTGTTTTAGTCCTCAAATTTTGCTACTTGTTCCATTTAGGTCCTCAAACTTTGAAAAGTTTCAATATAGTCCTTCAACTTTGAACAAAGTTACAAAATGGTCCTTGCAGTTAGAGTGAGGTTAAAATTTCCGTTAGATTGAAAAAAAATAAAAAAACTCTTCTCTATTCTCTTTTCAATTTCTCTTCTCCTCTGACTTGGCCCACCCATTGTTTAATTAAGTTTGAAAATCTCTAACATTCTATTATTAAATTGGGTTACTTCACATTTTTATCATCATTTCTGCAGAGTCTCTATCAATTGAGTTGTTTTTTAGAAATTGATAGAGGCAGAGTGCGAATACACTTGGCCACGACCCTTTGCTTATCAAAATCGTTATATCTTTCTTTTTCGCTCTCCCTTTTAATATCTCTGTAATTTTTCGGTTGTTCTGTTGTAACCTTGCTAGTGGAGAAAGGCGGAGCTTTGGGAGACGACATTTTTTCTGGTGGAGAAATCAATTCCATTTCAGGGGTTCAATTTATCTTCCCCCATCGATTGATGGGGTTAAATTGATATGAGAATTGAAATAGAAGTTGGGTTTGTTGAGATTCAGCGCGATCTTTGGAAAGTGAGACCTGTAAGAGGTGTTTTCATGGTAATGTGTGAAGATTTTTGAAGTTTGTGTTCCTCTGTTTTTTTTTGTTTTTCTTCCAATTGGTGCGTTTTTGCACTAGATTGATTTAGATTGAGAAACTGAGGTTGAATGTTTGGATATTTGGGATTTGGGTGTTGGGTTTTCTGATCCGGCATTGATCGAACTCGAGGGATCTAGGATTAGAAGGGGAAATTGTAGTGTAAGATGCAAAAGGGGAGATCGAGATGTGTAGGACATTGAAGAGTTCTGTGGTGATGGGATTGAAAGAATTGGGGGAGAGCAAAGATGAGAAGGTGAAAATTGAAGAGAGAGAGCAGAGCAGAGAAGAGAATTTTTTTTTTTTCTCAATCTAACGGAAATTTTAACCCACTCTAGCTGCACGGACCATTTTGTAGCTTTGTTCAAAGTTGGAGGACTATATTGAAAATTTTCAAAGTTTGAGGACCTAAATGGAACAAGTAACAAAGTTTGAAGACTAAAACAGTATTTTAACCTTACTTTTATTATGAACTAAGAAAGAATGACATTTAATTTAGCTGTCCATTATTCTAAAATTGGCAGGCTATTTTTATTGGGGCTAAAGAAATTTGGAAAGGGTGATTGGAGAAGCATTTCCAGAAACGTGGTGATTACAAGAACGCCAACGCAAGTAGCCAGCCACGCCCAAAAGTATTTTCTCCGCCAAGACTCCGCAAACAAACACTGCAAAAGATCGAGCATACATGACATCACCACCGTAGAAGGTACTTTAGTAACGGCGGCAGCGGCGACAAGAAATGTATTCTACATTTTCCGTTCTCTGCCACGTTTATATATGTGTGTATATGCATATACATACATATGTGTATATGTATATACATATATAAGCTGTATGAATGTTTTCTCACCAAATTCAATATCTTGTTTAAAATTAGTAAATACTTATGATTAA GTTTAGGGTCCCCTGTTTTTGCTCTCACTCCCAATGGAGCCCTTCCCATGTTCTTCCTCCGCCCTGCTCGCCGATTATTTGACCCCCACCACCGCTTCCATCCCCTGGACCCGCCACGAGGATAAGATTTTCGAGCACGCTCTGGTGGTGCTGCCGGAGAGCTCTCCCCACCGCTGGATCAACATCGCCGATCTTGTTCAGGGCAAATCGCCGGCCGACGTTAGGGACCACTACCATGCCTTGGTTTCTGGCGTGCTGGAGATCGAGTCTGGACGAGTTGAGTTGCCGAGTTATGGCGATGACTCGGGGTTGAGTTCGCCGGAGTCGGAGAAAACGGCGGAGAGGAAGAAGGGGAAGCCTTGGACCAAAAAGGAACACCAGCTATTTTTATTGGGGCTAAAGAAATTTGGAAAGGGTGATTGGAGAAGCATTTCCAGAAACGTGGTGATTACAAGAACGCCAACGCAAGTAGCCAGCCACGCCCAAAAGTATTTTCTCCGCCAAGACTCCGCAAACAAACACTGCAAAAGATCGAGCATACATGACATCACCACCGTAGAAGGTACTTTAGTAACGGCGGCAGCGGCGACAAGAAATGTATTCTACATTTTCCGTTCTCTGCCACGTTTATATATGTGTGTATATGCATATACATACATATGTGTATATGTATATACATATATAAGCTGTATGAATGTTTTCTCACCAAATTCAATATCTTGTTTAAAATTAGTAAATACTTATGATTAA ATGGAGCCCTTCCCATGTTCTTCCTCCGCCCTGCTCGCCGATTATTTGACCCCCACCACCGCTTCCATCCCCTGGACCCGCCACGAGGATAAGATTTTCGAGCACGCTCTGGTGGTGCTGCCGGAGAGCTCTCCCCACCGCTGGATCAACATCGCCGATCTTGTTCAGGGCAAATCGCCGGCCGACGTTAGGGACCACTACCATGCCTTGGTTTCTGGCGTGCTGGAGATCGAGTCTGGACGAGTTGAGTTGCCGAGTTATGGCGATGACTCGGGGTTGAGTTCGCCGGAGTCGGAGAAAACGGCGGAGAGGAAGAAGGGGAAGCCTTGGACCAAAAAGGAACACCAGCTATTTTTATTGGGGCTAAAGAAATTTGGAAAGGGTGATTGGAGAAGCATTTCCAGAAACGTGGTGATTACAAGAACGCCAACGCAAGTAGCCAGCCACGCCCAAAAGTATTTTCTCCGCCAAGACTCCGCAAACAAACACTGCAAAAGATCGAGCATACATGACATCACCACCGTAGAAGGTACTTTAGTAACGGCGGCAGCGGCGACAAGAAATGTATTCTACATTTTCCGTTCTCTGCCACGTTTATATATGTGTGTATATGCATATACATACATATGTGTATATGTATATACATATATAAGCTGTATGAATGTTTTCTCACCAAATTCAATATCTTGTTTAAAATTAGTAAATACTTATGATTAA MEPFPCSSSALLADYLTPTTASIPWTRHEDKIFEHALVVLPESSPHRWINIADLVQGKSPADVRDHYHALVSGVLEIESGRVELPSYGDDSGLSSPESEKTAERKKGKPWTKKEHQLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQDSANKHCKRSSIHDITTVEGTLVTAAAATRNVFYIFRSLPRLYMCVYAYTYICVYVYTYISCMNVFSPNSISCLKLVNTYD Homology
BLAST of Sed0020350 vs. NCBI nr
Match: XP_022963148.1 (transcription factor DIVARICATA-like [Cucurbita moschata]) HSP 1 Score: 273.1 bits (697), Expect = 2.3e-69 Identity = 142/192 (73.96%), Postives = 157/192 (81.77%), Query Frame = 0
BLAST of Sed0020350 vs. NCBI nr
Match: KAG6594977.1 (Adenylyl-sulfate kinase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 273.1 bits (697), Expect = 2.3e-69 Identity = 142/192 (73.96%), Postives = 157/192 (81.77%), Query Frame = 0
BLAST of Sed0020350 vs. NCBI nr
Match: XP_023518498.1 (transcription factor DIVARICATA-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 273.1 bits (697), Expect = 2.3e-69 Identity = 142/192 (73.96%), Postives = 157/192 (81.77%), Query Frame = 0
BLAST of Sed0020350 vs. NCBI nr
Match: XP_023003417.1 (transcription factor DIVARICATA-like [Cucurbita maxima]) HSP 1 Score: 271.6 bits (693), Expect = 6.7e-69 Identity = 142/192 (73.96%), Postives = 156/192 (81.25%), Query Frame = 0
BLAST of Sed0020350 vs. NCBI nr
Match: XP_038883508.1 (transcription factor DIVARICATA-like [Benincasa hispida]) HSP 1 Score: 262.3 bits (669), Expect = 4.0e-66 Identity = 139/193 (72.02%), Postives = 153/193 (79.27%), Query Frame = 0
BLAST of Sed0020350 vs. ExPASy Swiss-Prot
Match: Q8S9H7 (Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 3.0e-40 Identity = 90/184 (48.91%), Postives = 113/184 (61.41%), Query Frame = 0
BLAST of Sed0020350 vs. ExPASy Swiss-Prot
Match: Q9FNN6 (Transcription factor SRM1 OS=Arabidopsis thaliana OX=3702 GN=SRM1 PE=1 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 2.6e-39 Identity = 90/174 (51.72%), Postives = 108/174 (62.07%), Query Frame = 0
BLAST of Sed0020350 vs. ExPASy Swiss-Prot
Match: B8A9B2 (Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 3.5e-36 Identity = 93/222 (41.89%), Postives = 117/222 (52.70%), Query Frame = 0
BLAST of Sed0020350 vs. ExPASy Swiss-Prot
Match: Q8LH59 (Transcription factor MYBS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS1 PE=1 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 3.5e-36 Identity = 93/222 (41.89%), Postives = 117/222 (52.70%), Query Frame = 0
BLAST of Sed0020350 vs. ExPASy Swiss-Prot
Match: Q2V9B0 (Transcription factor MYB1R1 OS=Solanum tuberosum OX=4113 PE=2 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 1.2e-23 Identity = 53/78 (67.95%), Postives = 64/78 (82.05%), Query Frame = 0
BLAST of Sed0020350 vs. ExPASy TrEMBL
Match: A0A6J1HGW8 (transcription factor DIVARICATA-like OS=Cucurbita moschata OX=3662 GN=LOC111463444 PE=4 SV=1) HSP 1 Score: 273.1 bits (697), Expect = 1.1e-69 Identity = 142/192 (73.96%), Postives = 157/192 (81.77%), Query Frame = 0
BLAST of Sed0020350 vs. ExPASy TrEMBL
Match: A0A6J1KMG9 (transcription factor DIVARICATA-like OS=Cucurbita maxima OX=3661 GN=LOC111497033 PE=4 SV=1) HSP 1 Score: 271.6 bits (693), Expect = 3.2e-69 Identity = 142/192 (73.96%), Postives = 156/192 (81.25%), Query Frame = 0
BLAST of Sed0020350 vs. ExPASy TrEMBL
Match: A0A6J1BVC4 (transcription factor DIVARICATA-like OS=Momordica charantia OX=3673 GN=LOC111005863 PE=4 SV=1) HSP 1 Score: 256.1 bits (653), Expect = 1.4e-64 Identity = 137/203 (67.49%), Postives = 154/203 (75.86%), Query Frame = 0
BLAST of Sed0020350 vs. ExPASy TrEMBL
Match: A0A0A0KJP9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495660 PE=4 SV=1) HSP 1 Score: 245.0 bits (624), Expect = 3.2e-61 Identity = 132/198 (66.67%), Postives = 149/198 (75.25%), Query Frame = 0
BLAST of Sed0020350 vs. ExPASy TrEMBL
Match: A0A1S3B1M9 (transcription factor DIVARICATA-like OS=Cucumis melo OX=3656 GN=LOC103484855 PE=4 SV=1) HSP 1 Score: 241.5 bits (615), Expect = 3.6e-60 Identity = 124/185 (67.03%), Postives = 141/185 (76.22%), Query Frame = 0
BLAST of Sed0020350 vs. TAIR 10
Match: AT5G04760.1 (Duplicated homeodomain-like superfamily protein ) HSP 1 Score: 205.3 bits (521), Expect = 5.5e-53 Identity = 104/170 (61.18%), Postives = 124/170 (72.94%), Query Frame = 0
BLAST of Sed0020350 vs. TAIR 10
Match: AT5G08520.1 (Duplicated homeodomain-like superfamily protein ) HSP 1 Score: 163.7 bits (413), Expect = 1.8e-40 Identity = 90/174 (51.72%), Postives = 108/174 (62.07%), Query Frame = 0
BLAST of Sed0020350 vs. TAIR 10
Match: AT3G11280.1 (Duplicated homeodomain-like superfamily protein ) HSP 1 Score: 161.0 bits (406), Expect = 1.2e-39 Identity = 85/175 (48.57%), Postives = 113/175 (64.57%), Query Frame = 0
BLAST of Sed0020350 vs. TAIR 10
Match: AT3G11280.2 (Duplicated homeodomain-like superfamily protein ) HSP 1 Score: 161.0 bits (406), Expect = 1.2e-39 Identity = 85/175 (48.57%), Postives = 113/175 (64.57%), Query Frame = 0
BLAST of Sed0020350 vs. TAIR 10
Match: AT5G58900.1 (Homeodomain-like transcriptional regulator ) HSP 1 Score: 158.7 bits (400), Expect = 5.9e-39 Identity = 85/175 (48.57%), Postives = 110/175 (62.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|