Sed0020350 (gene) Chayote v1

Overview
NameSed0020350
Typegene
OrganismSechium edule (Chayote v1)
Descriptiontranscription factor DIVARICATA-like
LocationLG14: 18263561 .. 18266996 (-)
RNA-Seq ExpressionSed0020350
SyntenySed0020350
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTTAGGGTCCCCTGTTTTTGCTCTCACTCCCAATGGAGCCCTTCCCATGTTCTTCCTCCGCCCTGCTCGCCGATTATTTGACCCCCACCACCGCTTCCATCCCCTGGACCCGCCACGAGGATAAGATTTTCGAGCACGCTCTGGTGGTGCTGCCGGAGAGCTCTCCCCACCGCTGGATCAACATCGCCGATCTTGTTCAGGGCAAATCGCCGGCCGACGTTAGGGACCACTACCATGCCTTGGTTTCTGGCGTGCTGGAGATCGAGTCTGGACGAGTTGAGTTGCCGAGTTATGGCGATGACTCGGGGTTGAGTTCGCCGGAGTCGGAGAAAACGGCGGAGAGGAAGAAGGGGAAGCCTTGGACCAAAAAGGAACACCAGTATGTTTGTTTGCTTTAACCTTTTCTTTTCTCTTTGATTAAACTTTTAAATTTCTCTCAATAAAATCTATGTGAGTGTTTCATTGATTTTAGATTATGCCTATAAAAAATGTGCTGCAAATAATTCGGGATAAAATATAAGTTTAGTCCTCATTTAAAAAAACCAGAGTTTAATTTTTATGTTAAAAAAACAGAGTTTAAATTCTCAAAATATATATATATAATAAAAACAGAGTTTAATTTTTATGATTTAGACTCTATTTTTTTAAAATAACAATTTAGTTTAATAAGAGTTTCTTATAATTAAAGTTAATTATTTAATTATTTATGTATTATTGATGAAATTATGAATTAAGTAATTAATATAATAATAATAAAAAAATCATACCAAGTATGAATATTGAACTTTCATGTATTTAATATGTCAGCGATTATATAAGATAAGAATTATTCTTCAAGTTTTATAAAATTAAAGTGACTAAATTTAAATTTTTTAAATTACACCGATTAATTTTAATTTTCTTCAAATTATAAAGAATAAACTCTAGTTTTTTAAATTATGAGAATTAAAATGTAACCTTTTTTTTTAACCATAGACACTGAATTTATATTTTATCCAAATTATTGAATAAAACTATTTGAAGCATTTGATAATTTATGAAACTATTTTAATTTTAAATTGGTACTTCAATGATAATTTTTTTGTTCATTTATGAGTTATTTTAATTTTAAATAGGTGCTTAAATGTTCAATTTCAATTGATTTCTATTAAAATTAACTTGCACATAATTTTTAAGTGGGGAATTGAGATGTTCATAAACCTAATTGGTAAAATAGAAACAAACAACTGCAAATCAATAACCAATAAAAGTCATAAATAATATAGATATCATTTATGATATAAAAGGTTGTGAATTTGAATTTGGCAAATGTTTATTGAACTCACAAAATGATCTAAATAAGTACAACATAATATAAATTAATGATCAAATGTATATTTTCATTTTTCTATATCCAAAATGTCAATCCTCATTCTTTAATTTGAGTTGAATTTTAATAATTAAGAAGATATAAATTTAAATTTTCTATCCATAACTATTAAACTAAAATAAATAAATAGACTTAAAAAACATTATTCTAAAGTTAAGAGAGGTATATATTTGATATTATTTTTCTTAATCTAATTAGAAGAAAAATTTTAACCAACACCAAATCGGAAAAAAAAAAAAACAAGCAAAACAAAAAACCCAAGTTTTACCATGGAAAATCTCATATTAAAAAAGTGCAAATCTTCTGGTTATTATTATTTTTTTTTAAAATTTATATCATATATAAAATATTTTTTATATTAATAATTAATTTTGAGTTACTATTTAATATGAAATATCAAAATTCATTTTTAGTCAAATAAAAATGAAATTAAGATGGAATCCCAAAACAATGAACCAAGACACTATGTTGAGTTGTCAATTAATTTTATGTTAAAATACTGTTTTAGTCCTCAAATTTTGCTACTTGTTCCATTTAGGTCCTCAAACTTTGAAAAGTTTCAATATAGTCCTTCAACTTTGAACAAAGTTACAAAATGGTCCTTGCAGTTAGAGTGAGGTTAAAATTTCCGTTAGATTGAAAAAAAATAAAAAAACTCTTCTCTATTCTCTTTTCAATTTCTCTTCTCCTCTGACTTGGCCCACCCATTGTTTAATTAAGTTTGAAAATCTCTAACATTCTATTATTAAATTGGGTTACTTCACATTTTTATCATCATTTCTGCAGAGTCTCTATCAATTGAGTTGTTTTTTAGAAATTGATAGAGGCAGAGTGCGAATACACTTGGCCACGACCCTTTGCTTATCAAAATCGTTATATCTTTCTTTTTCGCTCTCCCTTTTAATATCTCTGTAATTTTTCGGTTGTTCTGTTGTAACCTTGCTAGTGGAGAAAGGCGGAGCTTTGGGAGACGACATTTTTTCTGGTGGAGAAATCAATTCCATTTCAGGGGTTCAATTTATCTTCCCCCATCGATTGATGGGGTTAAATTGATATGAGAATTGAAATAGAAGTTGGGTTTGTTGAGATTCAGCGCGATCTTTGGAAAGTGAGACCTGTAAGAGGTGTTTTCATGGTAATGTGTGAAGATTTTTGAAGTTTGTGTTCCTCTGTTTTTTTTTGTTTTTCTTCCAATTGGTGCGTTTTTGCACTAGATTGATTTAGATTGAGAAACTGAGGTTGAATGTTTGGATATTTGGGATTTGGGTGTTGGGTTTTCTGATCCGGCATTGATCGAACTCGAGGGATCTAGGATTAGAAGGGGAAATTGTAGTGTAAGATGCAAAAGGGGAGATCGAGATGTGTAGGACATTGAAGAGTTCTGTGGTGATGGGATTGAAAGAATTGGGGGAGAGCAAAGATGAGAAGGTGAAAATTGAAGAGAGAGAGCAGAGCAGAGAAGAGAATTTTTTTTTTTTCTCAATCTAACGGAAATTTTAACCCACTCTAGCTGCACGGACCATTTTGTAGCTTTGTTCAAAGTTGGAGGACTATATTGAAAATTTTCAAAGTTTGAGGACCTAAATGGAACAAGTAACAAAGTTTGAAGACTAAAACAGTATTTTAACCTTACTTTTATTATGAACTAAGAAAGAATGACATTTAATTTAGCTGTCCATTATTCTAAAATTGGCAGGCTATTTTTATTGGGGCTAAAGAAATTTGGAAAGGGTGATTGGAGAAGCATTTCCAGAAACGTGGTGATTACAAGAACGCCAACGCAAGTAGCCAGCCACGCCCAAAAGTATTTTCTCCGCCAAGACTCCGCAAACAAACACTGCAAAAGATCGAGCATACATGACATCACCACCGTAGAAGGTACTTTAGTAACGGCGGCAGCGGCGACAAGAAATGTATTCTACATTTTCCGTTCTCTGCCACGTTTATATATGTGTGTATATGCATATACATACATATGTGTATATGTATATACATATATAAGCTGTATGAATGTTTTCTCACCAAATTCAATATCTTGTTTAAAATTAGTAAATACTTATGATTAA

mRNA sequence

GTTTAGGGTCCCCTGTTTTTGCTCTCACTCCCAATGGAGCCCTTCCCATGTTCTTCCTCCGCCCTGCTCGCCGATTATTTGACCCCCACCACCGCTTCCATCCCCTGGACCCGCCACGAGGATAAGATTTTCGAGCACGCTCTGGTGGTGCTGCCGGAGAGCTCTCCCCACCGCTGGATCAACATCGCCGATCTTGTTCAGGGCAAATCGCCGGCCGACGTTAGGGACCACTACCATGCCTTGGTTTCTGGCGTGCTGGAGATCGAGTCTGGACGAGTTGAGTTGCCGAGTTATGGCGATGACTCGGGGTTGAGTTCGCCGGAGTCGGAGAAAACGGCGGAGAGGAAGAAGGGGAAGCCTTGGACCAAAAAGGAACACCAGCTATTTTTATTGGGGCTAAAGAAATTTGGAAAGGGTGATTGGAGAAGCATTTCCAGAAACGTGGTGATTACAAGAACGCCAACGCAAGTAGCCAGCCACGCCCAAAAGTATTTTCTCCGCCAAGACTCCGCAAACAAACACTGCAAAAGATCGAGCATACATGACATCACCACCGTAGAAGGTACTTTAGTAACGGCGGCAGCGGCGACAAGAAATGTATTCTACATTTTCCGTTCTCTGCCACGTTTATATATGTGTGTATATGCATATACATACATATGTGTATATGTATATACATATATAAGCTGTATGAATGTTTTCTCACCAAATTCAATATCTTGTTTAAAATTAGTAAATACTTATGATTAA

Coding sequence (CDS)

ATGGAGCCCTTCCCATGTTCTTCCTCCGCCCTGCTCGCCGATTATTTGACCCCCACCACCGCTTCCATCCCCTGGACCCGCCACGAGGATAAGATTTTCGAGCACGCTCTGGTGGTGCTGCCGGAGAGCTCTCCCCACCGCTGGATCAACATCGCCGATCTTGTTCAGGGCAAATCGCCGGCCGACGTTAGGGACCACTACCATGCCTTGGTTTCTGGCGTGCTGGAGATCGAGTCTGGACGAGTTGAGTTGCCGAGTTATGGCGATGACTCGGGGTTGAGTTCGCCGGAGTCGGAGAAAACGGCGGAGAGGAAGAAGGGGAAGCCTTGGACCAAAAAGGAACACCAGCTATTTTTATTGGGGCTAAAGAAATTTGGAAAGGGTGATTGGAGAAGCATTTCCAGAAACGTGGTGATTACAAGAACGCCAACGCAAGTAGCCAGCCACGCCCAAAAGTATTTTCTCCGCCAAGACTCCGCAAACAAACACTGCAAAAGATCGAGCATACATGACATCACCACCGTAGAAGGTACTTTAGTAACGGCGGCAGCGGCGACAAGAAATGTATTCTACATTTTCCGTTCTCTGCCACGTTTATATATGTGTGTATATGCATATACATACATATGTGTATATGTATATACATATATAAGCTGTATGAATGTTTTCTCACCAAATTCAATATCTTGTTTAAAATTAGTAAATACTTATGATTAA

Protein sequence

MEPFPCSSSALLADYLTPTTASIPWTRHEDKIFEHALVVLPESSPHRWINIADLVQGKSPADVRDHYHALVSGVLEIESGRVELPSYGDDSGLSSPESEKTAERKKGKPWTKKEHQLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQDSANKHCKRSSIHDITTVEGTLVTAAAATRNVFYIFRSLPRLYMCVYAYTYICVYVYTYISCMNVFSPNSISCLKLVNTYD
Homology
BLAST of Sed0020350 vs. NCBI nr
Match: XP_022963148.1 (transcription factor DIVARICATA-like [Cucurbita moschata])

HSP 1 Score: 273.1 bits (697), Expect = 2.3e-69
Identity = 142/192 (73.96%), Postives = 157/192 (81.77%), Query Frame = 0

Query: 5   PCSSSALLADYLTPTT---ASIPWTRHEDKIFEHALVVLPESSPHRWINIADLVQGKSPA 64
           P SS  LL  Y +PTT   +  PWTRH+DKIFEHALV++PE+SP+RW+ IA LV GKS A
Sbjct: 4   PSSSFGLLDHYWSPTTSIPSPTPWTRHQDKIFEHALVMVPENSPNRWMKIAGLVPGKSAA 63

Query: 65  DVRDHYHALVSGVLEIESGRVELPSYGDDSGLSSPE-------SEKTAERKKGKPWTKKE 124
           +VRDHY ALVS V +I+SGRVELP+Y D+S  SSPE        EK +ERKKGKPWTKKE
Sbjct: 64  EVRDHYDALVSDVQKIDSGRVELPNYADESLSSSPERESPCQLPEKASERKKGKPWTKKE 123

Query: 125 HQLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQDSANKHCKRSSIHDITT 184
           HQLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQ+SA K  KRSSIHDITT
Sbjct: 124 HQLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHDITT 183

Query: 185 VEGTLVTAAAAT 187
           VEG LVTA AAT
Sbjct: 184 VEGNLVTAVAAT 195

BLAST of Sed0020350 vs. NCBI nr
Match: KAG6594977.1 (Adenylyl-sulfate kinase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 273.1 bits (697), Expect = 2.3e-69
Identity = 142/192 (73.96%), Postives = 157/192 (81.77%), Query Frame = 0

Query: 5   PCSSSALLADYLTPTT---ASIPWTRHEDKIFEHALVVLPESSPHRWINIADLVQGKSPA 64
           P SS  LL  Y +PTT   +  PWTRH+DKIFEHALV++PE+SP+RW+ IA LV GKS A
Sbjct: 4   PSSSFGLLDHYWSPTTSIPSPTPWTRHQDKIFEHALVMVPENSPNRWMKIAGLVPGKSAA 63

Query: 65  DVRDHYHALVSGVLEIESGRVELPSYGDDSGLSSPE-------SEKTAERKKGKPWTKKE 124
           +VRDHY ALVS V +I+SGRVELP+Y D+S  SSPE        EK +ERKKGKPWTKKE
Sbjct: 64  EVRDHYDALVSDVQKIDSGRVELPNYADESLSSSPERESPCQLPEKASERKKGKPWTKKE 123

Query: 125 HQLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQDSANKHCKRSSIHDITT 184
           HQLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQ+SA K  KRSSIHDITT
Sbjct: 124 HQLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHDITT 183

Query: 185 VEGTLVTAAAAT 187
           VEG LVTA AAT
Sbjct: 184 VEGNLVTAVAAT 195

BLAST of Sed0020350 vs. NCBI nr
Match: XP_023518498.1 (transcription factor DIVARICATA-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 273.1 bits (697), Expect = 2.3e-69
Identity = 142/192 (73.96%), Postives = 157/192 (81.77%), Query Frame = 0

Query: 5   PCSSSALLADYLTPTT---ASIPWTRHEDKIFEHALVVLPESSPHRWINIADLVQGKSPA 64
           P SS  LL  Y +PTT   +  PWTRH+DKIFEHALV++PE+SP+RW+ IA LV GKS A
Sbjct: 4   PSSSFGLLDHYWSPTTSIPSPTPWTRHQDKIFEHALVMVPENSPNRWMKIAGLVPGKSAA 63

Query: 65  DVRDHYHALVSGVLEIESGRVELPSYGDDSGLSSPE-------SEKTAERKKGKPWTKKE 124
           +VRDHY ALVS V +I+SGRVELP+Y D+S  SSPE        EK +ERKKGKPWTKKE
Sbjct: 64  EVRDHYDALVSDVQKIDSGRVELPNYADESLSSSPERESPCQLPEKASERKKGKPWTKKE 123

Query: 125 HQLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQDSANKHCKRSSIHDITT 184
           HQLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQ+SA K  KRSSIHDITT
Sbjct: 124 HQLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHDITT 183

Query: 185 VEGTLVTAAAAT 187
           VEG LVTA AAT
Sbjct: 184 VEGNLVTAVAAT 195

BLAST of Sed0020350 vs. NCBI nr
Match: XP_023003417.1 (transcription factor DIVARICATA-like [Cucurbita maxima])

HSP 1 Score: 271.6 bits (693), Expect = 6.7e-69
Identity = 142/192 (73.96%), Postives = 156/192 (81.25%), Query Frame = 0

Query: 5   PCSSSALLADYLTPTT---ASIPWTRHEDKIFEHALVVLPESSPHRWINIADLVQGKSPA 64
           P SS  LL  Y +PTT   +  PWTRH+DKIFEHALV++PE+SP+RW+ IA LV GKS A
Sbjct: 4   PSSSFGLLDHYWSPTTSIPSPTPWTRHQDKIFEHALVMVPENSPNRWMKIAGLVPGKSAA 63

Query: 65  DVRDHYHALVSGVLEIESGRVELPSYGDDSGLSSPE-------SEKTAERKKGKPWTKKE 124
           +VRDHY ALVS V  I+SGRVELP+Y D+S LSSPE        EK +ERKKGKPWTKKE
Sbjct: 64  EVRDHYDALVSDVQNIDSGRVELPNYADESLLSSPERESPGQLPEKASERKKGKPWTKKE 123

Query: 125 HQLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQDSANKHCKRSSIHDITT 184
           HQLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQ+SA K  KRSSIHDITT
Sbjct: 124 HQLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHDITT 183

Query: 185 VEGTLVTAAAAT 187
           VE  LVTA AAT
Sbjct: 184 VECNLVTAVAAT 195

BLAST of Sed0020350 vs. NCBI nr
Match: XP_038883508.1 (transcription factor DIVARICATA-like [Benincasa hispida])

HSP 1 Score: 262.3 bits (669), Expect = 4.0e-66
Identity = 139/193 (72.02%), Postives = 153/193 (79.27%), Query Frame = 0

Query: 7   SSSALLADYLTPTT---ASIPWTRHEDKIFEHALVVLPESSPHRWINIADLVQGKSPADV 66
           SS  LL D  +PTT   + IPWTRH+DK+FEHALV++PE SP+RWI IA LV GKS ADV
Sbjct: 6   SSFGLLNDNWSPTTSFASPIPWTRHQDKLFEHALVMVPEDSPNRWIKIAGLVPGKSAADV 65

Query: 67  RDHYHALVSGVLEIESGRVELPSYGDD-SGLSSPESEKT---------AERKKGKPWTKK 126
           R HY  LVS VL I+SGRVELP+Y DD + L SPE E +         +ERKKGKPWTK 
Sbjct: 66  RYHYDVLVSDVLNIDSGRVELPNYADDLAALRSPEREDSPRPLSEKAPSERKKGKPWTKT 125

Query: 127 EHQLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQDSANKHCKRSSIHDIT 186
           EHQLFLLGLKKFGKGDWRSISRN VITRTPTQVASHAQKYFLRQ+S  K  KRSSIHDIT
Sbjct: 126 EHQLFLLGLKKFGKGDWRSISRNTVITRTPTQVASHAQKYFLRQESGRKDRKRSSIHDIT 185

BLAST of Sed0020350 vs. ExPASy Swiss-Prot
Match: Q8S9H7 (Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 3.0e-40
Identity = 90/184 (48.91%), Postives = 113/184 (61.41%), Query Frame = 0

Query: 15  YLTPTTASIPWTRHEDKIFEHALVVLPESSPHRWINIADLVQGKSPADVRDHYHALVSGV 74
           +L  + ++  WT  E+K FE+AL V  E++P+RW  +A+ V GK+  DV   Y  L   V
Sbjct: 16  FLEESRSTTRWTAAENKAFENALAVFDENTPNRWERVAERVPGKTVGDVMRQYKELEDDV 75

Query: 75  LEIESGRVELP-----------------------SYGDDSGLSSPESEKTAERKKGKPWT 134
             IE+G V +P                       SYG     SS       ERKKG PWT
Sbjct: 76  SSIEAGFVPVPGYSTSSPFTLEWGSGHGFDGFKQSYGTGGRKSSSGRPSEQERKKGVPWT 135

Query: 135 KKEHQLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQDSANKHCKRSSIHD 176
           ++EH+LFL+GLKK+GKGDWR+ISRN VITRTPTQVASHAQKYF+RQ S  K  +R+SIHD
Sbjct: 136 EEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRASIHD 195

BLAST of Sed0020350 vs. ExPASy Swiss-Prot
Match: Q9FNN6 (Transcription factor SRM1 OS=Arabidopsis thaliana OX=3702 GN=SRM1 PE=1 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.6e-39
Identity = 90/174 (51.72%), Postives = 108/174 (62.07%), Query Frame = 0

Query: 25  WTRHEDKIFEHALVVLPESSPHRWINIADLVQGKSPADVRDHYHALVSGVLEIESGRVEL 84
           W+R +D  FE AL    + S  RW  IA  V GKS   +++HY  LV  V  IESG V L
Sbjct: 12  WSREDDIAFERALANNTDESEERWEKIAADVPGKSVEQIKEHYELLVEDVTRIESGCVPL 71

Query: 85  PSYGD---------DSGLSSP--------------ESEKTAERKKGKPWTKKEHQLFLLG 144
           P+YG          D G SS               +S+   ER+KG  WT+ EH+LFLLG
Sbjct: 72  PAYGSPEGSNGHAGDEGASSKKGGNSHAGESNQAGKSKSDQERRKGIAWTEDEHRLFLLG 131

Query: 145 LKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQDSANKHCKRSSIHDITTV 176
           L K+GKGDWRSISRN V+TRTPTQVASHAQKYF+R +S NK  +RSSIHDIT+V
Sbjct: 132 LDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSV 185

BLAST of Sed0020350 vs. ExPASy Swiss-Prot
Match: B8A9B2 (Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 3.5e-36
Identity = 93/222 (41.89%), Postives = 117/222 (52.70%), Query Frame = 0

Query: 17  TPTTASIPWTRHEDKIFEHALVVLPESSP-------HRWIN--IADLVQGKSPADVRDHY 76
           T   A+  WTR +DK FE+AL       P         W     A +   +S  +VR HY
Sbjct: 10  TTAAAAAAWTREDDKAFENALAACAAPPPADGGAPDDDWFAALAASVPGARSAEEVRRHY 69

Query: 77  HALVSGVLEIESGRVELPSYGDDSGLSSPE------------------------------ 136
            ALV  V  I++GRV LP Y  +   + P+                              
Sbjct: 70  EALVEDVAAIDAGRVPLPRYAGEESAAPPDGAGAAAAASKDGGHRRDERKGGGGGYDGGK 129

Query: 137 --SEKTAERKKGKPWTKKEHQLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFL 189
             S+   ER+KG PWT++EH+LFLLGL KFGKGDWRSISRN VI+RTPTQVASHAQKYF+
Sbjct: 130 SCSKAEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFI 189

BLAST of Sed0020350 vs. ExPASy Swiss-Prot
Match: Q8LH59 (Transcription factor MYBS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS1 PE=1 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 3.5e-36
Identity = 93/222 (41.89%), Postives = 117/222 (52.70%), Query Frame = 0

Query: 17  TPTTASIPWTRHEDKIFEHALVVLPESSP-------HRWIN--IADLVQGKSPADVRDHY 76
           T   A+  WTR +DK FE+AL       P         W     A +   +S  +VR HY
Sbjct: 10  TTAAAAAAWTREDDKAFENALAACAAPPPADGGAPDDDWFAALAASVPGARSAEEVRRHY 69

Query: 77  HALVSGVLEIESGRVELPSYGDDSGLSSPE------------------------------ 136
            ALV  V  I++GRV LP Y  +   + P+                              
Sbjct: 70  EALVEDVAAIDAGRVPLPRYAGEESAAPPDGAGAAAAASKDGGHRRDERKGGGGGYDGGK 129

Query: 137 --SEKTAERKKGKPWTKKEHQLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFL 189
             S+   ER+KG PWT++EH+LFLLGL KFGKGDWRSISRN VI+RTPTQVASHAQKYF+
Sbjct: 130 SCSKAEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFI 189

BLAST of Sed0020350 vs. ExPASy Swiss-Prot
Match: Q2V9B0 (Transcription factor MYB1R1 OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.2e-23
Identity = 53/78 (67.95%), Postives = 64/78 (82.05%), Query Frame = 0

Query: 97  ESEKTAERKKGKPWTKKEHQLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLR 156
           +S    ERK+G PWT++EH+LFLLGL+K GKGDWR ISRN V TRTPTQVASHAQKYFLR
Sbjct: 84  QSNSGRERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLR 143

Query: 157 QDSANKHCKRSSIHDITT 175
           + + N+  +RSS+ DITT
Sbjct: 144 RSNLNRRRRRSSLFDITT 161

BLAST of Sed0020350 vs. ExPASy TrEMBL
Match: A0A6J1HGW8 (transcription factor DIVARICATA-like OS=Cucurbita moschata OX=3662 GN=LOC111463444 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 1.1e-69
Identity = 142/192 (73.96%), Postives = 157/192 (81.77%), Query Frame = 0

Query: 5   PCSSSALLADYLTPTT---ASIPWTRHEDKIFEHALVVLPESSPHRWINIADLVQGKSPA 64
           P SS  LL  Y +PTT   +  PWTRH+DKIFEHALV++PE+SP+RW+ IA LV GKS A
Sbjct: 4   PSSSFGLLDHYWSPTTSIPSPTPWTRHQDKIFEHALVMVPENSPNRWMKIAGLVPGKSAA 63

Query: 65  DVRDHYHALVSGVLEIESGRVELPSYGDDSGLSSPE-------SEKTAERKKGKPWTKKE 124
           +VRDHY ALVS V +I+SGRVELP+Y D+S  SSPE        EK +ERKKGKPWTKKE
Sbjct: 64  EVRDHYDALVSDVQKIDSGRVELPNYADESLSSSPERESPCQLPEKASERKKGKPWTKKE 123

Query: 125 HQLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQDSANKHCKRSSIHDITT 184
           HQLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQ+SA K  KRSSIHDITT
Sbjct: 124 HQLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHDITT 183

Query: 185 VEGTLVTAAAAT 187
           VEG LVTA AAT
Sbjct: 184 VEGNLVTAVAAT 195

BLAST of Sed0020350 vs. ExPASy TrEMBL
Match: A0A6J1KMG9 (transcription factor DIVARICATA-like OS=Cucurbita maxima OX=3661 GN=LOC111497033 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 3.2e-69
Identity = 142/192 (73.96%), Postives = 156/192 (81.25%), Query Frame = 0

Query: 5   PCSSSALLADYLTPTT---ASIPWTRHEDKIFEHALVVLPESSPHRWINIADLVQGKSPA 64
           P SS  LL  Y +PTT   +  PWTRH+DKIFEHALV++PE+SP+RW+ IA LV GKS A
Sbjct: 4   PSSSFGLLDHYWSPTTSIPSPTPWTRHQDKIFEHALVMVPENSPNRWMKIAGLVPGKSAA 63

Query: 65  DVRDHYHALVSGVLEIESGRVELPSYGDDSGLSSPE-------SEKTAERKKGKPWTKKE 124
           +VRDHY ALVS V  I+SGRVELP+Y D+S LSSPE        EK +ERKKGKPWTKKE
Sbjct: 64  EVRDHYDALVSDVQNIDSGRVELPNYADESLLSSPERESPGQLPEKASERKKGKPWTKKE 123

Query: 125 HQLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQDSANKHCKRSSIHDITT 184
           HQLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQ+SA K  KRSSIHDITT
Sbjct: 124 HQLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHDITT 183

Query: 185 VEGTLVTAAAAT 187
           VE  LVTA AAT
Sbjct: 184 VECNLVTAVAAT 195

BLAST of Sed0020350 vs. ExPASy TrEMBL
Match: A0A6J1BVC4 (transcription factor DIVARICATA-like OS=Momordica charantia OX=3673 GN=LOC111005863 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 1.4e-64
Identity = 137/203 (67.49%), Postives = 154/203 (75.86%), Query Frame = 0

Query: 1   MEPFPCSSSALLADYLTPTTA---SIPWTRHEDKIFEHALVVLPESSPHRWINIADLVQG 60
           ME  P  S  +  DY +P TA     PWTRH+DKIFEHALV++PE+SP+RW+ IA L+ G
Sbjct: 1   MEGPPSPSFRVSDDYWSPKTAPSSPAPWTRHQDKIFEHALVMVPENSPNRWLRIAGLIPG 60

Query: 61  KSPADVRDHYHALVSGVLEIESGRVELPSYG-DDSGLSSPESE---------------KT 120
           KSPA+V  HY ALVS +L+I+SGRVELPSY  DDS  S PE+E                 
Sbjct: 61  KSPAEVSYHYDALVSDLLDIDSGRVELPSYAEDDSVASLPETEAPPPNLSEKPSKSRPNE 120

Query: 121 AERKKGKPWTKKEHQLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQDSAN 180
            ERKKGKPWTKKEHQLFLLGLKKFGKGDWRSISRNVVI+RTPTQVASHAQKYFLRQ+SA 
Sbjct: 121 TERKKGKPWTKKEHQLFLLGLKKFGKGDWRSISRNVVISRTPTQVASHAQKYFLRQESAK 180

Query: 181 KHCKRSSIHDITTVEGTLVTAAA 185
           K  KRSSIHDITTVEG+LV AAA
Sbjct: 181 KDRKRSSIHDITTVEGSLVAAAA 203

BLAST of Sed0020350 vs. ExPASy TrEMBL
Match: A0A0A0KJP9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495660 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 3.2e-61
Identity = 132/198 (66.67%), Postives = 149/198 (75.25%), Query Frame = 0

Query: 1   MEPF-PCSSSALLADYLTPTTASIPWTRHEDKIFEHALVVLPESSPHRWINIADLVQGKS 60
           MEP  P      +A   +PT    PWTRH+D +FEHALV++P++SP RWI IA LV GKS
Sbjct: 1   MEPHSPSFGLFPVASLSSPT----PWTRHQDNLFEHALVLVPDNSPDRWIKIAALVPGKS 60

Query: 61  PADVRDHYHALVSGVLEIESGRVELPSYGDDSGLSS------------PESEKTA--ERK 120
            ADVR HY  LVS VL+I+SGRVELP+Y DD  ++             P SEKT+  ERK
Sbjct: 61  AADVRYHYDVLVSDVLDIDSGRVELPNYADDLTVAKSSERERSPPSPRPVSEKTSTTERK 120

Query: 121 KGKPWTKKEHQLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQDSANKHCK 180
           KGKPWTKKEHQLFLLGLKKFGKGDWRSISRN VITRTPTQVASHAQKYFLRQ+SA K  K
Sbjct: 121 KGKPWTKKEHQLFLLGLKKFGKGDWRSISRNAVITRTPTQVASHAQKYFLRQESAKKDRK 180

Query: 181 RSSIHDITTVEGTLVTAA 184
           RSSIHDITTVEG+LVT +
Sbjct: 181 RSSIHDITTVEGSLVTTS 194

BLAST of Sed0020350 vs. ExPASy TrEMBL
Match: A0A1S3B1M9 (transcription factor DIVARICATA-like OS=Cucumis melo OX=3656 GN=LOC103484855 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 3.6e-60
Identity = 124/185 (67.03%), Postives = 141/185 (76.22%), Query Frame = 0

Query: 16  LTPTTASIPWTRHEDKIFEHALVVLPESSPHRWINIADLVQGKSPADVRDHYHALVSGVL 75
           +T  ++  PWTRH+D +FE ALV++P++SP RWI IA LV GKS ADVR HY  LVS VL
Sbjct: 13  ITSFSSPTPWTRHQDDLFERALVLVPDNSPDRWIKIAALVPGKSAADVRYHYDVLVSDVL 72

Query: 76  EIESGRVELPSYGDD-SGLSSPESEK-----------TAERKKGKPWTKKEHQLFLLGLK 135
            I+SGRVELP+Y DD +   SPE EK           ++ERKKGKPWTKKEHQLFLLGL+
Sbjct: 73  NIDSGRVELPNYADDLTAARSPEREKSPPHPISEKASSSERKKGKPWTKKEHQLFLLGLR 132

Query: 136 KFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQDSANKHCKRSSIHDITTVEGTLVTAA 189
           KFGKGDWRSISRN VITRTPTQVASHAQKYFLRQ+SA K  KRSSIHDITTVEG LV  +
Sbjct: 133 KFGKGDWRSISRNAVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHDITTVEGNLVMTS 192

BLAST of Sed0020350 vs. TAIR 10
Match: AT5G04760.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 205.3 bits (521), Expect = 5.5e-53
Identity = 104/170 (61.18%), Postives = 124/170 (72.94%), Query Frame = 0

Query: 21  ASIPWTRHEDKIFEHALVVLPESSPHRWINIADLVQGKSPADVRDHYHALVSGVLEIESG 80
           AS  WTR EDK+FE ALV+ PE SP+RW  IAD +  KS  +VR+HY  LV  V EI+SG
Sbjct: 2   ASSQWTRSEDKMFEQALVLFPEGSPNRWERIADQLH-KSAGEVREHYEVLVHDVFEIDSG 61

Query: 81  RVELPSYGDDSG-----------LSSPESEKTAERKKGKPWTKKEHQLFLLGLKKFGKGD 140
           RV++P Y DDS            +S       +ERK+G PWT+ EH+LFL+GLK++GKGD
Sbjct: 62  RVDVPDYMDDSAAAAAGWDSAGQISFGSKHGESERKRGTPWTENEHKLFLIGLKRYGKGD 121

Query: 141 WRSISRNVVITRTPTQVASHAQKYFLRQDSANKHCKRSSIHDITTVEGTL 180
           WRSISRNVV+TRTPTQVASHAQKYFLRQ+S  K  KRSSIHDITTV+ TL
Sbjct: 122 WRSISRNVVVTRTPTQVASHAQKYFLRQNSVKKERKRSSIHDITTVDATL 170

BLAST of Sed0020350 vs. TAIR 10
Match: AT5G08520.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 163.7 bits (413), Expect = 1.8e-40
Identity = 90/174 (51.72%), Postives = 108/174 (62.07%), Query Frame = 0

Query: 25  WTRHEDKIFEHALVVLPESSPHRWINIADLVQGKSPADVRDHYHALVSGVLEIESGRVEL 84
           W+R +D  FE AL    + S  RW  IA  V GKS   +++HY  LV  V  IESG V L
Sbjct: 12  WSREDDIAFERALANNTDESEERWEKIAADVPGKSVEQIKEHYELLVEDVTRIESGCVPL 71

Query: 85  PSYGD---------DSGLSSP--------------ESEKTAERKKGKPWTKKEHQLFLLG 144
           P+YG          D G SS               +S+   ER+KG  WT+ EH+LFLLG
Sbjct: 72  PAYGSPEGSNGHAGDEGASSKKGGNSHAGESNQAGKSKSDQERRKGIAWTEDEHRLFLLG 131

Query: 145 LKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQDSANKHCKRSSIHDITTV 176
           L K+GKGDWRSISRN V+TRTPTQVASHAQKYF+R +S NK  +RSSIHDIT+V
Sbjct: 132 LDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSV 185

BLAST of Sed0020350 vs. TAIR 10
Match: AT3G11280.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 161.0 bits (406), Expect = 1.2e-39
Identity = 85/175 (48.57%), Postives = 113/175 (64.57%), Query Frame = 0

Query: 19  TTASIPWTRHEDKIFEHALVVLPESSPHRWINIADLVQGKSPADVRDHYHALVSGVLEIE 78
           +++S  WT+ E+K+FE AL +  E SP RW  +A ++ GK+  DV   Y  L   V +IE
Sbjct: 27  SSSSGSWTKEENKMFERALAIYAEDSPDRWFKVASMIPGKTVFDVMKQYSKLEEDVFDIE 86

Query: 79  SGRVELPSY-------GDDSGL----SSPESEKTAERKKGKPWTKKEHQLFLLGLKKFGK 138
           +GRV +P Y       G D+ +     S       +RKKG PWT++EH+ FLLGL K+GK
Sbjct: 87  AGRVPIPGYPAASSPLGFDTDMCRKRPSGARGSDQDRKKGVPWTEEEHRRFLLGLLKYGK 146

Query: 139 GDWRSISRNVVITRTPTQVASHAQKYFLRQDSANKHCKRSSIHDITTVEGTLVTA 183
           GDWR+ISRN V+++TPTQVASHAQKY+ RQ S  K  +R SIHDITT  G L+ A
Sbjct: 147 GDWRNISRNFVVSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITT--GNLLNA 199

BLAST of Sed0020350 vs. TAIR 10
Match: AT3G11280.2 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 161.0 bits (406), Expect = 1.2e-39
Identity = 85/175 (48.57%), Postives = 113/175 (64.57%), Query Frame = 0

Query: 19  TTASIPWTRHEDKIFEHALVVLPESSPHRWINIADLVQGKSPADVRDHYHALVSGVLEIE 78
           +++S  WT+ E+K+FE AL +  E SP RW  +A ++ GK+  DV   Y  L   V +IE
Sbjct: 27  SSSSGSWTKEENKMFERALAIYAEDSPDRWFKVASMIPGKTVFDVMKQYSKLEEDVFDIE 86

Query: 79  SGRVELPSY-------GDDSGL----SSPESEKTAERKKGKPWTKKEHQLFLLGLKKFGK 138
           +GRV +P Y       G D+ +     S       +RKKG PWT++EH+ FLLGL K+GK
Sbjct: 87  AGRVPIPGYPAASSPLGFDTDMCRKRPSGARGSDQDRKKGVPWTEEEHRRFLLGLLKYGK 146

Query: 139 GDWRSISRNVVITRTPTQVASHAQKYFLRQDSANKHCKRSSIHDITTVEGTLVTA 183
           GDWR+ISRN V+++TPTQVASHAQKY+ RQ S  K  +R SIHDITT  G L+ A
Sbjct: 147 GDWRNISRNFVVSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITT--GNLLNA 199

BLAST of Sed0020350 vs. TAIR 10
Match: AT5G58900.1 (Homeodomain-like transcriptional regulator )

HSP 1 Score: 158.7 bits (400), Expect = 5.9e-39
Identity = 85/175 (48.57%), Postives = 110/175 (62.86%), Query Frame = 0

Query: 25  WTRHEDKIFEHALVVLPESSPHRWINIADLVQGKSPADVRDHYHALVSGVLEIESGRVEL 84
           WT  E+K FE+AL V  +++P RW  +A ++ GK+ +DV   Y+ L + V  IE+G + +
Sbjct: 34  WTAAENKAFENALAVYDDNTPDRWQKVAAVIPGKTVSDVIRQYNDLEADVSSIEAGLIPV 93

Query: 85  PSY--------------GDDSGL----------SSPESEKTAERKKGKPWTKKEHQLFLL 144
           P Y              G  +G           S        ERKKG PWT++EH+LFL+
Sbjct: 94  PGYITSPPFTLDWAGGGGGCNGFKPGHQVCNKRSQAGRSPELERKKGVPWTEEEHKLFLM 153

Query: 145 GLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQDSANKHCKRSSIHDITTV 176
           GLKK+GKGDWR+ISRN VITRTPTQVASHAQKYF+RQ S  K  +R+SIHDITTV
Sbjct: 154 GLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTV 208

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022963148.12.3e-6973.96transcription factor DIVARICATA-like [Cucurbita moschata][more]
KAG6594977.12.3e-6973.96Adenylyl-sulfate kinase, chloroplastic, partial [Cucurbita argyrosperma subsp. s... [more]
XP_023518498.12.3e-6973.96transcription factor DIVARICATA-like [Cucurbita pepo subsp. pepo][more]
XP_023003417.16.7e-6973.96transcription factor DIVARICATA-like [Cucurbita maxima][more]
XP_038883508.14.0e-6672.02transcription factor DIVARICATA-like [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Q8S9H73.0e-4048.91Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 ... [more]
Q9FNN62.6e-3951.72Transcription factor SRM1 OS=Arabidopsis thaliana OX=3702 GN=SRM1 PE=1 SV=1[more]
B8A9B23.5e-3641.89Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 ... [more]
Q8LH593.5e-3641.89Transcription factor MYBS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS1 PE=... [more]
Q2V9B01.2e-2367.95Transcription factor MYB1R1 OS=Solanum tuberosum OX=4113 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1HGW81.1e-6973.96transcription factor DIVARICATA-like OS=Cucurbita moschata OX=3662 GN=LOC1114634... [more]
A0A6J1KMG93.2e-6973.96transcription factor DIVARICATA-like OS=Cucurbita maxima OX=3661 GN=LOC111497033... [more]
A0A6J1BVC41.4e-6467.49transcription factor DIVARICATA-like OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A0A0KJP93.2e-6166.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495660 PE=4 SV=1[more]
A0A1S3B1M93.6e-6067.03transcription factor DIVARICATA-like OS=Cucumis melo OX=3656 GN=LOC103484855 PE=... [more]
Match NameE-valueIdentityDescription
AT5G04760.15.5e-5361.18Duplicated homeodomain-like superfamily protein [more]
AT5G08520.11.8e-4051.72Duplicated homeodomain-like superfamily protein [more]
AT3G11280.11.2e-3948.57Duplicated homeodomain-like superfamily protein [more]
AT3G11280.21.2e-3948.57Duplicated homeodomain-like superfamily protein [more]
AT5G58900.15.9e-3948.57Homeodomain-like transcriptional regulator [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 21..73
e-value: 3.7E-5
score: 33.1
coord: 106..156
e-value: 1.6E-11
score: 54.3
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 102..154
score: 7.537855
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 17..71
score: 6.515964
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 24..71
e-value: 1.49732E-6
score: 42.1774
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 109..154
e-value: 2.41196E-10
score: 52.5778
IPR006447Myb domain, plantsTIGRFAMTIGR01557TIGR01557coord: 105..157
e-value: 2.4E-16
score: 57.8
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 108..153
e-value: 2.1E-11
score: 43.8
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 102..158
score: 18.457405
NoneNo IPR availableGENE3D1.10.10.60coord: 108..159
e-value: 7.9E-16
score: 60.0
NoneNo IPR availableGENE3D1.10.10.60coord: 19..84
e-value: 3.0E-17
score: 64.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..109
NoneNo IPR availablePANTHERPTHR44042:SF15SYRINGOLIDE-INDUCED PROTEIN 1-3-1Bcoord: 20..183
IPR043363Transcription factor DIVARICATA-likePANTHERPTHR44042DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 20..183
IPR017884SANT domainPROSITEPS51293SANTcoord: 105..158
score: 10.697225
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 24..78
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 103..158

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0020350.1Sed0020350.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding