Sed0020330 (gene) Chayote v1

Overview
NameSed0020330
Typegene
OrganismSechium edule (Chayote v1)
Descriptiontrihelix transcription factor GT-3b
LocationLG04: 23598843 .. 23600620 (+)
RNA-Seq ExpressionSed0020330
SyntenySed0020330
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACCAACCCATATTAAAAAATTTAGCCTTTCATTTTCTTTCCTCCAACGACGATCCTATTCCCCCTTTTTTTTTCTTTTCTTTTTCTCTTTCAGATATCTATATAATTTTCTCTAGTTTTTGATGCTCATGGAAGGCCACAACCCTCATCATCCCCTTGTTCAGCTCCACCTACAGCAGCAACAGCTTCAACATCAGCCACCGCATCTCCACCATAGCCTTGGCGTCGCCGCCGATCAAACAGCCGCCGCCACCGACAGATTTCCTCAATGGAGTATTCAGGAAACGAAGGAGTTTTTGATGATCAGAGCGGAGCTGGACCAGAATTTCATGGAGACCAAAAGAAACAAACTCTTGTGGGAATTTACTGCCTCCAAAATGAAGGAAAAGGGTTTCAATCGCAGCCCTGATCAGTGTAAATGCAAATGGAAAAACCTCGTTACCCGTTATAAGGTATTCTTAATATATTATTAATCTCTTTTTATCTTTATTTATGTATAATTTTTCTTTTATAATATATAGTATTCATATCAATCAGATAACTTCCAGTGGTTATTAGTAAACAATCTTCAAAATTTCGCTGGGTTATTTCAGATCAAAGTTTGGAAGCAAACAAGAGCATAATTTTGAATGATATAAAATATGAGTTTATGATTAAAATCTTATGAGTTCAAATCTCAAATCTTTAATTCAAAATTACCTATAAACCCTTGAAATTTAGGATATTAATTGTGTCAATAGGTTTCCTGATATCTCAACCGTTAAAGACATCAATAATCTAGTTGTATATTGGTGGGTAGAAAAGGGAAATTCATAACGTTGATGGTATTTTATGTTATTATGTATGCATTCAGGGATGTGAAACGATGGAGCCAGAAATTTCAAGGCAGCAATTTCCATTTTACACAGAGCTACAAGCGATTTTCGGGGCAAGAATGCAAAGGATACTATTGGCAGAGGCGGAGAGCGGGGGGAGTGGATCGAAGAAGAAGGCAATGGCAATATCGTCCGACGAAGACGAAGAAAACGAGGACAGCGACGGGGGCGGCGGCGACACGAAAGTTGGCAATAAGAAGAGGAAGAAGGGTAAAGGGAGTGTCAGTGCGAGTGCGGGGGGAGGGAGCAGTAGTAGCATAGATCATTTGAAAGAAATATTGGAAGATTTTATGAATCAACAAATGCAAATGGAGAATCAATGGAGGGAGGCATTTGAAGCAAGGGAAAAAGAGAGGCTAATGAGGGAAATGGAGTGGAGAAGGAACATGGAAGCTTTAGAACATGAGAGGATAGTGTTGGAAAGAGGATGGAGAGAAAGAGAAGAACAAAGGAGAATGAGAGAGGAAGTTAGGGCTGAAAAAAGAGATGCTTTAATCACAACTTTGTTAAACAAGCTAAGAAGAGATGATTATAGGTAGAATTAATTTGCTCTCTCCTTTTGTTATCTTATTCTTTTTGCTTCATGAGGTTTGGCCTCTAACCTATTCTCATAGTTTCATTTTCAAGTTCTTTTATCAAAGTTCATTTGATTTTTGCATGAATATCAATCTCTTATTTAGTTCTCGGACTGAAAAGATTGGTGACATATTAACTTGATTAATGAATTGTAATCTAATTCAATTTCACAATCGAGTTCGATTTTGAAAATTTGTATTTGATTCTAATTTTATTTGAGATTAATAGCATCCTCTATGTAGGAGAATAGTTAGTTATATGTCTTAATTGATCGAGCTATCTTTAGGTTAACAAATATCAATTTCTTAGCTGCTAGGTTTTTTTTTT

mRNA sequence

CACCAACCCATATTAAAAAATTTAGCCTTTCATTTTCTTTCCTCCAACGACGATCCTATTCCCCCTTTTTTTTTCTTTTCTTTTTCTCTTTCAGATATCTATATAATTTTCTCTAGTTTTTGATGCTCATGGAAGGCCACAACCCTCATCATCCCCTTGTTCAGCTCCACCTACAGCAGCAACAGCTTCAACATCAGCCACCGCATCTCCACCATAGCCTTGGCGTCGCCGCCGATCAAACAGCCGCCGCCACCGACAGATTTCCTCAATGGAGTATTCAGGAAACGAAGGAGTTTTTGATGATCAGAGCGGAGCTGGACCAGAATTTCATGGAGACCAAAAGAAACAAACTCTTGTGGGAATTTACTGCCTCCAAAATGAAGGAAAAGGGTTTCAATCGCAGCCCTGATCAGTGTAAATGCAAATGGAAAAACCTCGTTACCCGTTATAAGGGATGTGAAACGATGGAGCCAGAAATTTCAAGGCAGCAATTTCCATTTTACACAGAGCTACAAGCGATTTTCGGGGCAAGAATGCAAAGGATACTATTGGCAGAGGCGGAGAGCGGGGGGAGTGGATCGAAGAAGAAGGCAATGGCAATATCGTCCGACGAAGACGAAGAAAACGAGGACAGCGACGGGGGCGGCGGCGACACGAAAGTTGGCAATAAGAAGAGGAAGAAGGGTAAAGGGAGTGTCAGTGCGAGTGCGGGGGGAGGGAGCAGTAGTAGCATAGATCATTTGAAAGAAATATTGGAAGATTTTATGAATCAACAAATGCAAATGGAGAATCAATGGAGGGAGGCATTTGAAGCAAGGGAAAAAGAGAGGCTAATGAGGGAAATGGAGTGGAGAAGGAACATGGAAGCTTTAGAACATGAGAGGATAGTGTTGGAAAGAGGATGGAGAGAAAGAGAAGAACAAAGGAGAATGAGAGAGGAAGTTAGGGCTGAAAAAAGAGATGCTTTAATCACAACTTTGTTAAACAAGCTAAGAAGAGATGATTATAGGTAGAATTAATTTGCTCTCTCCTTTTGTTATCTTATTCTTTTTGCTTCATGAGGTTTGGCCTCTAACCTATTCTCATAGTTTCATTTTCAAGTTCTTTTATCAAAGTTCATTTGATTTTTGCATGAATATCAATCTCTTATTTAGTTCTCGGACTGAAAAGATTGGTGACATATTAACTTGATTAATGAATTGTAATCTAATTCAATTTCACAATCGAGTTCGATTTTGAAAATTTGTATTTGATTCTAATTTTATTTGAGATTAATAGCATCCTCTATGTAGGAGAATAGTTAGTTATATGTCTTAATTGATCGAGCTATCTTTAGGTTAACAAATATCAATTTCTTAGCTGCTAGGTTTTTTTTTT

Coding sequence (CDS)

ATGCTCATGGAAGGCCACAACCCTCATCATCCCCTTGTTCAGCTCCACCTACAGCAGCAACAGCTTCAACATCAGCCACCGCATCTCCACCATAGCCTTGGCGTCGCCGCCGATCAAACAGCCGCCGCCACCGACAGATTTCCTCAATGGAGTATTCAGGAAACGAAGGAGTTTTTGATGATCAGAGCGGAGCTGGACCAGAATTTCATGGAGACCAAAAGAAACAAACTCTTGTGGGAATTTACTGCCTCCAAAATGAAGGAAAAGGGTTTCAATCGCAGCCCTGATCAGTGTAAATGCAAATGGAAAAACCTCGTTACCCGTTATAAGGGATGTGAAACGATGGAGCCAGAAATTTCAAGGCAGCAATTTCCATTTTACACAGAGCTACAAGCGATTTTCGGGGCAAGAATGCAAAGGATACTATTGGCAGAGGCGGAGAGCGGGGGGAGTGGATCGAAGAAGAAGGCAATGGCAATATCGTCCGACGAAGACGAAGAAAACGAGGACAGCGACGGGGGCGGCGGCGACACGAAAGTTGGCAATAAGAAGAGGAAGAAGGGTAAAGGGAGTGTCAGTGCGAGTGCGGGGGGAGGGAGCAGTAGTAGCATAGATCATTTGAAAGAAATATTGGAAGATTTTATGAATCAACAAATGCAAATGGAGAATCAATGGAGGGAGGCATTTGAAGCAAGGGAAAAAGAGAGGCTAATGAGGGAAATGGAGTGGAGAAGGAACATGGAAGCTTTAGAACATGAGAGGATAGTGTTGGAAAGAGGATGGAGAGAAAGAGAAGAACAAAGGAGAATGAGAGAGGAAGTTAGGGCTGAAAAAAGAGATGCTTTAATCACAACTTTGTTAAACAAGCTAAGAAGAGATGATTATAGGTAG

Protein sequence

MLMEGHNPHHPLVQLHLQQQQLQHQPPHLHHSLGVAADQTAAATDRFPQWSIQETKEFLMIRAELDQNFMETKRNKLLWEFTASKMKEKGFNRSPDQCKCKWKNLVTRYKGCETMEPEISRQQFPFYTELQAIFGARMQRILLAEAESGGSGSKKKAMAISSDEDEENEDSDGGGGDTKVGNKKRKKGKGSVSASAGGGSSSSIDHLKEILEDFMNQQMQMENQWREAFEAREKERLMREMEWRRNMEALEHERIVLERGWREREEQRRMREEVRAEKRDALITTLLNKLRRDDYR
Homology
BLAST of Sed0020330 vs. NCBI nr
Match: XP_038903384.1 (trihelix transcription factor GT-3b-like isoform X1 [Benincasa hispida] >XP_038903385.1 trihelix transcription factor GT-3b-like isoform X2 [Benincasa hispida])

HSP 1 Score: 445.3 bits (1144), Expect = 4.2e-121
Identity = 247/300 (82.33%), Postives = 266/300 (88.67%), Query Frame = 0

Query: 3   MEGHNPH-HPLVQLHLQQQQLQH-QPPHLHHSLGVAADQ-TAAATDRFPQWSIQETKEFL 62
           MEGH+PH HPL+QLH QQQ +QH  PPHLH SL V+ADQ T +A DRFPQWSIQETKEFL
Sbjct: 1   MEGHHPHPHPLIQLH-QQQLIQHPPPPHLHQSLTVSADQTTGSAADRFPQWSIQETKEFL 60

Query: 63  MIRAELDQNFMETKRNKLLWEFTASKMKEKGFNRSPDQCKCKWKNLVTRYKGCETMEPEI 122
           MIRAELDQ FMETKRNKLLWE TASKMKEKGFNRS +QCKCKWKNLVTRYKGCETMEPEI
Sbjct: 61  MIRAELDQTFMETKRNKLLWEITASKMKEKGFNRSAEQCKCKWKNLVTRYKGCETMEPEI 120

Query: 123 SRQQFPFYTELQAIFGARMQRILLAEAESGGSGSKKK-AMAISSDEDEENEDSDGGGGDT 182
           SRQQFPF+TELQAIFGARMQRIL AEAESGGSGSKKK  MA+SSD+DEEN+DSDG GG+T
Sbjct: 121 SRQQFPFFTELQAIFGARMQRILWAEAESGGSGSKKKTTMALSSDDDEENDDSDGDGGET 180

Query: 183 KVGNKKRKKGKGSVSASAGGG---SSSSIDHLKEILEDFMNQQMQMENQWREAFEAREKE 242
           KV  +KRK+ KG+ S +  GG     SSI+ LKEILEDFMNQQMQME QWREAFEAREKE
Sbjct: 181 KVSGRKRKRIKGTSSTTTIGGEGSGKSSINDLKEILEDFMNQQMQMEVQWREAFEAREKE 240

Query: 243 RLMREMEWRRNMEALEHERIVLERGWREREEQRRMREEVRAEKRDALITTLLNKLRRDDY 296
           R M+EMEWRRNMEALEHERI+LER WREREEQRRMREEVRAEKRDALIT LLNKLRRDD+
Sbjct: 241 RQMKEMEWRRNMEALEHERIMLERRWREREEQRRMREEVRAEKRDALITALLNKLRRDDH 299

BLAST of Sed0020330 vs. NCBI nr
Match: KAG6596342.1 (Trihelix transcription factor GT-3a, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 435.3 bits (1118), Expect = 4.3e-118
Identity = 245/306 (80.07%), Postives = 259/306 (84.64%), Query Frame = 0

Query: 3   MEGHNPHHPLVQLHL---QQQQLQHQPP-------HLHHSLGVAADQTA--AATDRFPQW 62
           MEGHNP HPLV LHL   QQQQLQH PP       HLH +L   ADQTA  A  DRFPQW
Sbjct: 1   MEGHNP-HPLVHLHLQQQQQQQLQHPPPPPPPQQQHLHQNL---ADQTAVNAVADRFPQW 60

Query: 63  SIQETKEFLMIRAELDQNFMETKRNKLLWEFTASKMKEKGFNRSPDQCKCKWKNLVTRYK 122
           SIQETKEFLMIRAELDQ FMETKRNKLLWE TA+KMKEKGFNRS +QCKCKWKNLVTRYK
Sbjct: 61  SIQETKEFLMIRAELDQRFMETKRNKLLWEITAAKMKEKGFNRSAEQCKCKWKNLVTRYK 120

Query: 123 GCETMEPEISRQQFPFYTELQAIFGARMQRILLAEAESGGSGSKKKAMAISSDEDEENED 182
           GCETMEPEISRQQFPFYTELQAIFGARM RIL AEAESGGSGSKKK   +SSDED+ENED
Sbjct: 121 GCETMEPEISRQQFPFYTELQAIFGARMHRILWAEAESGGSGSKKKTTVLSSDEDDENED 180

Query: 183 SDGGGGDTKV-GNKKRKKGKGSVSASAGGGSSSSIDHLKEILEDFMNQQMQMENQWREAF 242
           SDG GGDTK  G K +KKGKG+       G SSSI+HLKEILEDFMNQQ+QME QWREAF
Sbjct: 181 SDGDGGDTKASGRKSKKKGKGNT------GGSSSINHLKEILEDFMNQQIQMEIQWREAF 240

Query: 243 EAREKERLMREMEWRRNMEALEHERIVLERGWREREEQRRMREEVRAEKRDALITTLLNK 296
           E+REKER +REMEWRR MEALEHERI+LER WREREEQRRMR+EVRAEKRDALIT LLNK
Sbjct: 241 ESREKERQIREMEWRRKMEALEHERIMLERRWREREEQRRMRDEVRAEKRDALITALLNK 296

BLAST of Sed0020330 vs. NCBI nr
Match: XP_023540206.1 (trihelix transcription factor GT-3b-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 435.3 bits (1118), Expect = 4.3e-118
Identity = 245/307 (79.80%), Postives = 260/307 (84.69%), Query Frame = 0

Query: 3   MEGHNPHHPLVQLHLQQ---QQLQHQPP--------HLHHSLGVAADQTA--AATDRFPQ 62
           MEGHNP HPLV LHLQQ   QQLQH PP        HLH +L   ADQTA  A  DRFPQ
Sbjct: 1   MEGHNP-HPLVHLHLQQQQHQQLQHPPPPPPPQQQQHLHQNL---ADQTAVNAVADRFPQ 60

Query: 63  WSIQETKEFLMIRAELDQNFMETKRNKLLWEFTASKMKEKGFNRSPDQCKCKWKNLVTRY 122
           WSIQETKEFLMIRAELDQ FMETKRNKLLWE TA+KMKEKGFNRS +QCKCKWKNLVTRY
Sbjct: 61  WSIQETKEFLMIRAELDQRFMETKRNKLLWEITAAKMKEKGFNRSAEQCKCKWKNLVTRY 120

Query: 123 KGCETMEPEISRQQFPFYTELQAIFGARMQRILLAEAESGGSGSKKKAMAISSDEDEENE 182
           KGCETMEPEISRQQFPFYTELQAIFGARM RIL AEAESGGSGSKKK   +SSDED+ENE
Sbjct: 121 KGCETMEPEISRQQFPFYTELQAIFGARMHRILWAEAESGGSGSKKKTTVLSSDEDDENE 180

Query: 183 DSDGGGGDTKV-GNKKRKKGKGSVSASAGGGSSSSIDHLKEILEDFMNQQMQMENQWREA 242
           DSDG GGDTK  G K ++KGKG+      GG SSSI+HLKEILEDFMNQQ+QME QWREA
Sbjct: 181 DSDGDGGDTKASGRKSKRKGKGN------GGGSSSINHLKEILEDFMNQQIQMEIQWREA 240

Query: 243 FEAREKERLMREMEWRRNMEALEHERIVLERGWREREEQRRMREEVRAEKRDALITTLLN 296
           FE+REKER +REMEWRR MEALEHERI+LER WREREEQRRMR+EVRAEKRDALIT LLN
Sbjct: 241 FESREKERQIREMEWRRKMEALEHERIMLERRWREREEQRRMRDEVRAEKRDALITALLN 297

BLAST of Sed0020330 vs. NCBI nr
Match: KAG7027894.1 (Trihelix transcription factor GT-3a, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 434.5 bits (1116), Expect = 7.4e-118
Identity = 245/306 (80.07%), Postives = 259/306 (84.64%), Query Frame = 0

Query: 3   MEGHNPHHPLVQLHL---QQQQLQHQPP-------HLHHSLGVAADQTA--AATDRFPQW 62
           MEGHNP HPLV LHL   QQQQLQH PP       HLH +L   ADQTA  A  DRFPQW
Sbjct: 1   MEGHNP-HPLVHLHLQQQQQQQLQHPPPPPPPQQQHLHQNL---ADQTAVNAVADRFPQW 60

Query: 63  SIQETKEFLMIRAELDQNFMETKRNKLLWEFTASKMKEKGFNRSPDQCKCKWKNLVTRYK 122
           SIQETKEFLMIRAELDQ FMETKRNKLLWE TA+KMKEKGFNRS +QCKCKWKNLVTRYK
Sbjct: 61  SIQETKEFLMIRAELDQRFMETKRNKLLWEITAAKMKEKGFNRSAEQCKCKWKNLVTRYK 120

Query: 123 GCETMEPEISRQQFPFYTELQAIFGARMQRILLAEAESGGSGSKKKAMAISSDEDEENED 182
           GCETMEPEISRQQFPFYTELQAIFGARM RIL AEAESGGSGSKKK   +SSDED+ENED
Sbjct: 121 GCETMEPEISRQQFPFYTELQAIFGARMHRILWAEAESGGSGSKKKTTVLSSDEDDENED 180

Query: 183 SDGGGGDTKV-GNKKRKKGKGSVSASAGGGSSSSIDHLKEILEDFMNQQMQMENQWREAF 242
           SDG GGDTK  G K +KKGKG+       G SSSI+HLKEILEDFMNQQ+QME QWREAF
Sbjct: 181 SDGDGGDTKASGRKSKKKGKGN------AGGSSSINHLKEILEDFMNQQIQMEIQWREAF 240

Query: 243 EAREKERLMREMEWRRNMEALEHERIVLERGWREREEQRRMREEVRAEKRDALITTLLNK 296
           E+REKER +REMEWRR MEALEHERI+LER WREREEQRRMR+EVRAEKRDALIT LLNK
Sbjct: 241 ESREKERQIREMEWRRKMEALEHERIMLERRWREREEQRRMRDEVRAEKRDALITALLNK 296

BLAST of Sed0020330 vs. NCBI nr
Match: XP_022963584.1 (trihelix transcription factor GT-3b [Cucurbita moschata])

HSP 1 Score: 433.7 bits (1114), Expect = 1.3e-117
Identity = 245/308 (79.55%), Postives = 259/308 (84.09%), Query Frame = 0

Query: 3   MEGHNPHHPLVQLHL-----QQQQLQHQPP-------HLHHSLGVAADQTA--AATDRFP 62
           MEGHNP HPLV LHL     QQQQLQH PP       HLH +L   ADQTA  A  DRFP
Sbjct: 1   MEGHNP-HPLVHLHLQQQQQQQQQLQHPPPPPPPQQQHLHQNL---ADQTAVNAVADRFP 60

Query: 63  QWSIQETKEFLMIRAELDQNFMETKRNKLLWEFTASKMKEKGFNRSPDQCKCKWKNLVTR 122
           QWSIQETKEFLMIRAELDQ FMETKRNKLLWE TA+KMKEKGFNRS +QCKCKWKNLVTR
Sbjct: 61  QWSIQETKEFLMIRAELDQRFMETKRNKLLWEITAAKMKEKGFNRSAEQCKCKWKNLVTR 120

Query: 123 YKGCETMEPEISRQQFPFYTELQAIFGARMQRILLAEAESGGSGSKKKAMAISSDEDEEN 182
           YKGCETMEPEISRQQFPFYTELQAIFGARM RIL AEAESGGSGSKKK   +SSDED+EN
Sbjct: 121 YKGCETMEPEISRQQFPFYTELQAIFGARMHRILWAEAESGGSGSKKKTTVLSSDEDDEN 180

Query: 183 EDSDGGGGDTKV-GNKKRKKGKGSVSASAGGGSSSSIDHLKEILEDFMNQQMQMENQWRE 242
           EDSDG GGDTK  G K +KKGKG+       G SSSI+HLKEILEDFMNQQ+QME QWRE
Sbjct: 181 EDSDGDGGDTKASGRKSKKKGKGN------AGGSSSINHLKEILEDFMNQQIQMEIQWRE 240

Query: 243 AFEAREKERLMREMEWRRNMEALEHERIVLERGWREREEQRRMREEVRAEKRDALITTLL 296
           AFE+REKER +REMEWRR MEALEHERI+LER WREREEQRRMR+EVRAEKRDALIT LL
Sbjct: 241 AFESREKERQIREMEWRRKMEALEHERIMLERRWREREEQRRMRDEVRAEKRDALITALL 298

BLAST of Sed0020330 vs. ExPASy Swiss-Prot
Match: O80450 (Trihelix transcription factor GT-3b OS=Arabidopsis thaliana OX=3702 GN=GT-3B PE=1 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 4.4e-73
Identity = 168/299 (56.19%), Postives = 206/299 (68.90%), Query Frame = 0

Query: 3   MEGHNPHHPLVQLHLQQQQLQHQPPHLH-HSLGVAADQTAAATDRFPQWSIQETKEFLMI 62
           M+GH  HH    LH  Q   +H   HLH  S         A  DRFPQWS++ETKE + I
Sbjct: 1   MDGHQHHH----LHQLQYLNKH---HLHTQSQTPEIASPVAVGDRFPQWSVEETKELIGI 60

Query: 63  RAELDQNFMETKRNKLLWEFTASKMKEKGFNRSPDQCKCKWKNLVTRYKGCETMEPEISR 122
           R ELDQ FMETKRNKLLWE  ++KM++K F RSP+QCKCKWKNLVTR+KGCETME E +R
Sbjct: 61  RGELDQTFMETKRNKLLWEVISNKMRDKSFPRSPEQCKCKWKNLVTRFKGCETMEAETAR 120

Query: 123 QQFPFYTELQAIFGARMQRILLAEAESGGSGSKKKA--MAISSDEDEE--NEDSDGGGGD 182
           QQFPFY ++Q IF  RMQR+L AE+E GG G+   A     SSDE+EE  NE+      D
Sbjct: 121 QQFPFYDDMQNIFTTRMQRMLWAESEGGGGGTSGAARKREYSSDEEEENVNEELVDVSND 180

Query: 183 TKVGNKKR---KKGKGSVSASAGGGSSSSIDHLKEILEDFMNQQMQMENQWREAFEAREK 242
            K+ N K+   KK KG      G  SS+S + ++E+LE+FM  Q++ME++WRE +EAREK
Sbjct: 181 PKILNPKKNIAKKRKG------GSNSSNSNNGVREVLEEFMRHQVRMESEWREGWEAREK 240

Query: 243 ERLMREMEWRRNMEALEHERIVLERGWREREEQRRMREEVRAEKRDALITTLLNKLRRD 294
           ER  +E EWRR ME LE ER+ +ER WR+REEQRR REE+RAEKRD+LI  LL KL RD
Sbjct: 241 ERAEKEEEWRRKMEELEKERLAMERMWRDREEQRRSREEMRAEKRDSLINALLAKLTRD 286

BLAST of Sed0020330 vs. ExPASy Swiss-Prot
Match: Q9SDW0 (Trihelix transcription factor GT-3a OS=Arabidopsis thaliana OX=3702 GN=GT-3A PE=1 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 6.8e-66
Identity = 153/306 (50.00%), Postives = 192/306 (62.75%), Query Frame = 0

Query: 6   HNPHHPLVQLHLQQQQLQHQPPHLHHSLGVAADQTAAATDRFPQWSIQETKEFLMIRAEL 65
           H+ HH  +  HL QQQ Q  PP L  +  +         +R PQWSI+ETKE L IR EL
Sbjct: 9   HHHHHHQLHHHLIQQQ-QLPPPPLSTTATMDPGGGGGGGERIPQWSIEETKELLAIREEL 68

Query: 66  DQNFMETKRNKLLWEFTASKMKEKGFNRSPDQCKCKWKNLVTRYKGCETMEPEISRQQFP 125
           DQ FMETKRNKLLWE  A+KM +KGF RS +QCK KWKNLVTRYK CET EP+  RQQFP
Sbjct: 69  DQTFMETKRNKLLWEVVAAKMADKGFVRSAEQCKSKWKNLVTRYKACETTEPDAIRQQFP 128

Query: 126 FYTELQAIFGARMQRILLAEAESGGSGSKKKAMAISSDEDEENEDSDGGGGD-------- 185
           FY E+Q+IF ARMQR+L +EA    + SK+K    SSD++EE  D      +        
Sbjct: 129 FYNEIQSIFEARMQRMLWSEATEPSTSSKRKHHQFSSDDEEEEVDEPNQDINEELLSLVE 188

Query: 186 ----------TKVGNKKRKKGKGSVSASAGGGSSSSIDHLKEILEDFMNQQMQMENQWRE 245
                     T      RK+ K     ++G  + ++ + LK+ILE+FM Q ++ME +WR+
Sbjct: 189 TQKRETEVITTSTSTNPRKRAKKGKGVASGTKAETAGNTLKDILEEFMRQTVKMEKEWRD 248

Query: 246 AFEAREKERLMREMEWRRNMEALEHERIVLERGWREREEQRRMREEVRAEKRDALITTLL 294
           A+E +E ER  RE EWRR M  LE ER   ER W EREE+RR+REE RA+KRD+LI  LL
Sbjct: 249 AWEMKEIEREKREKEWRRRMAELEEERAATERRWMEREEERRLREEARAQKRDSLIDALL 308

BLAST of Sed0020330 vs. ExPASy Swiss-Prot
Match: Q9LU92 (Trihelix transcription factor GT-4 OS=Arabidopsis thaliana OX=3702 GN=GT-4 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.6e-11
Identity = 40/133 (30.08%), Postives = 70/133 (52.63%), Query Frame = 0

Query: 42  AATDRFPQWSIQETKEFLMIRAELDQNFMETKRNKLLWEFTASKMKEKGFNRSPDQCKCK 101
           A   R   W+  ET+  + +R E+D  F  +K NK LWE  + KM+EKGF+RSP  C  K
Sbjct: 47  APKKRAETWAQDETRTLISLRREMDNLFNTSKSNKHLWEQISKKMREKGFDRSPSMCTDK 106

Query: 102 WKNLVTRYKGCETMEPEIS---RQQFPFYTELQAIFGARMQRILLAEAESGGSGSKKKAM 161
           W+N++  +K  +  E + +     +  +Y E++ IF  R +++   ++ +  + S  K  
Sbjct: 107 WRNILKEFKKAKQHEDKATSGGSTKMSYYNEIEDIFRERKKKVAFYKSPATTTPSSAKVD 166

Query: 162 AISSDEDEENEDS 172
           +     D+  ED+
Sbjct: 167 SFMQFTDKGFEDT 179

BLAST of Sed0020330 vs. ExPASy Swiss-Prot
Match: Q9FX53 (Trihelix transcription factor GT-1 OS=Arabidopsis thaliana OX=3702 GN=GT-1 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 3.7e-11
Identity = 47/139 (33.81%), Postives = 70/139 (50.36%), Query Frame = 0

Query: 3   MEGHNPHHPLVQLHLQQQQLQHQPPHLHHSLGVAADQTAAATDRFPQWSIQETKEFLMIR 62
           ++ H+ HH     HL Q Q Q Q   L  S G    +  A   R   W   ET+  +M R
Sbjct: 43  LQSHH-HHNHHNHHLHQSQPQQQ-ILLGESSG-EDHEVKAPKKRAETWVQDETRSLIMFR 102

Query: 63  AELDQNFMETKRNKLLWEFTASKMKEKGFNRSPDQCKCKWKNLVTRYKGCETMEPEISRQ 122
             +D  F  +K NK LWE  +SKM+EKGF+RSP  C  KW+NL+  +K  +  +      
Sbjct: 103 RGMDGLFNTSKSNKHLWEQISSKMREKGFDRSPTMCTDKWRNLLKEFKKAKHHDRGNGSA 162

Query: 123 QFPFYTELQAIFGARMQRI 142
           +  +Y E++ I   R +++
Sbjct: 163 KMSYYKEIEDILRERSKKV 178

BLAST of Sed0020330 vs. ExPASy Swiss-Prot
Match: Q9C882 (Trihelix transcription factor GTL1 OS=Arabidopsis thaliana OX=3702 GN=GTL1 PE=1 SV=2)

HSP 1 Score: 50.4 bits (119), Expect = 3.9e-05
Identity = 70/308 (22.73%), Postives = 121/308 (39.29%), Query Frame = 0

Query: 41  AAATDRFPQWSIQETKEFLMIRAELDQNFMETKRNKLLWEFTASKMKEKGFNRSPDQCKC 100
           +A++    +W  +ET   L IR+++D  F +      LWE  + K+ E G+ RS  +CK 
Sbjct: 54  SASSSSGNRWPREETLALLRIRSDMDSTFRDATLKAPLWEHVSRKLLELGYKRSSKKCKE 113

Query: 101 KWKNLVTRYKGC-ETMEPEISRQQFPFYTELQAIFG------------ARMQRILLAEAE 160
           K++N+   YK   ET       + + F+++L+A+              +    IL+  + 
Sbjct: 114 KFENVQKYYKRTKETRGGRHDGKAYKFFSQLEALNTTPPSSSLDVTPLSVANPILMPSSS 173

Query: 161 SG---------------------------------------------GSGSKKKAMAISS 220
           S                                               S S   A  + S
Sbjct: 174 SSPFPVFSQPQPQTQTQPPQTHNVSFTPTPPPLPLPSMGPIFTGVTFSSHSSSTASGMGS 233

Query: 221 DEDEENEDSDGGGGDTKVGNKKRKKGKGSVSASAGGGSSSSIDHLKEILEDFMNQQMQME 280
           D+D+++ D D        G+  RK+ +G+      GG    ++  + ++   M +Q  M+
Sbjct: 234 DDDDDDMDVDQA---NIAGSSSRKRKRGN-----RGGGGKMMELFEGLVRQVMQKQAAMQ 293

Query: 281 NQWREAFEAREKERLMREMEWRRNMEALEHERIVLERGWREREEQRRMREEVRAEKRDAL 291
             + EA E RE+ERL RE  W+R            E     RE +   +E   +  RDA 
Sbjct: 294 RSFLEALEKREQERLDREEAWKRQ-----------EMARLAREHEVMSQERAASASRDAA 342

BLAST of Sed0020330 vs. ExPASy TrEMBL
Match: A0A6J1HKL6 (trihelix transcription factor GT-3b OS=Cucurbita moschata OX=3662 GN=LOC111463850 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 6.1e-118
Identity = 245/308 (79.55%), Postives = 259/308 (84.09%), Query Frame = 0

Query: 3   MEGHNPHHPLVQLHL-----QQQQLQHQPP-------HLHHSLGVAADQTA--AATDRFP 62
           MEGHNP HPLV LHL     QQQQLQH PP       HLH +L   ADQTA  A  DRFP
Sbjct: 1   MEGHNP-HPLVHLHLQQQQQQQQQLQHPPPPPPPQQQHLHQNL---ADQTAVNAVADRFP 60

Query: 63  QWSIQETKEFLMIRAELDQNFMETKRNKLLWEFTASKMKEKGFNRSPDQCKCKWKNLVTR 122
           QWSIQETKEFLMIRAELDQ FMETKRNKLLWE TA+KMKEKGFNRS +QCKCKWKNLVTR
Sbjct: 61  QWSIQETKEFLMIRAELDQRFMETKRNKLLWEITAAKMKEKGFNRSAEQCKCKWKNLVTR 120

Query: 123 YKGCETMEPEISRQQFPFYTELQAIFGARMQRILLAEAESGGSGSKKKAMAISSDEDEEN 182
           YKGCETMEPEISRQQFPFYTELQAIFGARM RIL AEAESGGSGSKKK   +SSDED+EN
Sbjct: 121 YKGCETMEPEISRQQFPFYTELQAIFGARMHRILWAEAESGGSGSKKKTTVLSSDEDDEN 180

Query: 183 EDSDGGGGDTKV-GNKKRKKGKGSVSASAGGGSSSSIDHLKEILEDFMNQQMQMENQWRE 242
           EDSDG GGDTK  G K +KKGKG+       G SSSI+HLKEILEDFMNQQ+QME QWRE
Sbjct: 181 EDSDGDGGDTKASGRKSKKKGKGN------AGGSSSINHLKEILEDFMNQQIQMEIQWRE 240

Query: 243 AFEAREKERLMREMEWRRNMEALEHERIVLERGWREREEQRRMREEVRAEKRDALITTLL 296
           AFE+REKER +REMEWRR MEALEHERI+LER WREREEQRRMR+EVRAEKRDALIT LL
Sbjct: 241 AFESREKERQIREMEWRRKMEALEHERIMLERRWREREEQRRMRDEVRAEKRDALITALL 298

BLAST of Sed0020330 vs. ExPASy TrEMBL
Match: A0A6J1I3N7 (trihelix transcription factor GT-3b-like OS=Cucurbita maxima OX=3661 GN=LOC111470254 PE=4 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 2.3e-117
Identity = 244/309 (78.96%), Postives = 259/309 (83.82%), Query Frame = 0

Query: 3   MEGHNPHHPLVQLHL------QQQQLQHQPP-------HLHHSLGVAADQTA--AATDRF 62
           MEGHNP HPLV LHL      QQQQLQH PP       HLH +L   ADQTA  A TDRF
Sbjct: 1   MEGHNP-HPLVHLHLQQQQQQQQQQLQHPPPPPPPQQQHLHQNL---ADQTAVNAVTDRF 60

Query: 63  PQWSIQETKEFLMIRAELDQNFMETKRNKLLWEFTASKMKEKGFNRSPDQCKCKWKNLVT 122
           PQWSIQETKEFLMIRAELDQ FMETKRNKLLWE TA+KMKEKGFNRS +QCKCKWKNLVT
Sbjct: 61  PQWSIQETKEFLMIRAELDQRFMETKRNKLLWEITAAKMKEKGFNRSAEQCKCKWKNLVT 120

Query: 123 RYKGCETMEPEISRQQFPFYTELQAIFGARMQRILLAEAESGGSGSKKKAMAISSDEDEE 182
           RYKGCETMEPEISRQQFPFYTELQAIFGARM RIL AEAESGGSGSKKK   +SSDED+E
Sbjct: 121 RYKGCETMEPEISRQQFPFYTELQAIFGARMHRILWAEAESGGSGSKKKTTVLSSDEDDE 180

Query: 183 NEDSDGGGGDTKV-GNKKRKKGKGSVSASAGGGSSSSIDHLKEILEDFMNQQMQMENQWR 242
           NEDSDG GGDTK  G K +KKGKG+      GG SSSI+HLKEILEDF+NQQ+QME QW+
Sbjct: 181 NEDSDGDGGDTKASGRKSKKKGKGN------GGGSSSINHLKEILEDFINQQIQMEIQWK 240

Query: 243 EAFEAREKERLMREMEWRRNMEALEHERIVLERGWREREEQRRMREEVRAEKRDALITTL 296
           EAFEAREKER +REMEWRR MEALEHERI+LER WREREEQRRMR+EVRAEKRD LIT L
Sbjct: 241 EAFEAREKERQIREMEWRRKMEALEHERIMLERRWREREEQRRMRDEVRAEKRDGLITAL 299

BLAST of Sed0020330 vs. ExPASy TrEMBL
Match: E5GBE8 (Transcription factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 3.0e-117
Identity = 240/307 (78.18%), Postives = 258/307 (84.04%), Query Frame = 0

Query: 3   MEGHN------PH-HPLVQLHLQQQQLQH----QPPHLHHSLGVAADQTAAAT---DRFP 62
           MEGH+      PH HPL+QLH QQQQ+QH     PPHLH SL  A DQ A  T   DRFP
Sbjct: 1   MEGHHHPHPHPPHPHPLIQLH-QQQQIQHPPPPPPPHLHQSL--AVDQAATGTAIADRFP 60

Query: 63  QWSIQETKEFLMIRAELDQNFMETKRNKLLWEFTASKMKEKGFNRSPDQCKCKWKNLVTR 122
           QWSIQETKEFLMIRAELDQ FMETKRNKLLWE TASKMKEKGFNRS +QCKCKWKNLVTR
Sbjct: 61  QWSIQETKEFLMIRAELDQTFMETKRNKLLWEITASKMKEKGFNRSAEQCKCKWKNLVTR 120

Query: 123 YKGCETMEPEISRQQFPFYTELQAIFGARMQRILLAEAESGGSGSKKKAMAISSDEDEEN 182
           YKGCETMEPEISRQQFPFYTELQAIFGAR +RIL AE ESGGSG KKK M +SSD+++EN
Sbjct: 121 YKGCETMEPEISRQQFPFYTELQAIFGARRERILWAEVESGGSGLKKKMMVLSSDDEDEN 180

Query: 183 EDSDGGGGDTKVGNKKRKKGKGSVSASAGGGSSSSIDHLKEILEDFMNQQMQMENQWREA 242
           +DSDG GG+TKV  +KRKK KG+    A G   SS++ LKEILEDFMNQQMQME QWREA
Sbjct: 181 DDSDGDGGETKVSGRKRKKVKGTTIGGAEGSGKSSMNELKEILEDFMNQQMQMEMQWREA 240

Query: 243 FEAREKERLMREMEWRRNMEALEHERIVLERGWREREEQRRMREEVRAEKRDALITTLLN 296
           FEAREKER M+EMEWRRNMEALEHERI+LER WREREEQRRMREEVRAEKRDALIT LLN
Sbjct: 241 FEAREKERQMKEMEWRRNMEALEHERIMLERRWREREEQRRMREEVRAEKRDALITALLN 300

BLAST of Sed0020330 vs. ExPASy TrEMBL
Match: A0A5D3DMW3 (Trihelix transcription factor GT-3b OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00730 PE=4 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 3.0e-117
Identity = 240/307 (78.18%), Postives = 258/307 (84.04%), Query Frame = 0

Query: 3   MEGHN------PH-HPLVQLHLQQQQLQH----QPPHLHHSLGVAADQTAAAT---DRFP 62
           MEGH+      PH HPL+QLH QQQQ+QH     PPHLH SL  A DQ A  T   DRFP
Sbjct: 1   MEGHHHPHPHPPHPHPLIQLH-QQQQIQHPPPPPPPHLHQSL--AVDQAATGTAIADRFP 60

Query: 63  QWSIQETKEFLMIRAELDQNFMETKRNKLLWEFTASKMKEKGFNRSPDQCKCKWKNLVTR 122
           QWSIQETKEFLMIRAELDQ FMETKRNKLLWE TASKMKEKGFNRS +QCKCKWKNLVTR
Sbjct: 61  QWSIQETKEFLMIRAELDQTFMETKRNKLLWEITASKMKEKGFNRSAEQCKCKWKNLVTR 120

Query: 123 YKGCETMEPEISRQQFPFYTELQAIFGARMQRILLAEAESGGSGSKKKAMAISSDEDEEN 182
           YKGCETMEPEISRQQFPFYTELQAIFGAR +RIL AE ESGGSG KKK M +SSD+++EN
Sbjct: 121 YKGCETMEPEISRQQFPFYTELQAIFGARRERILWAEVESGGSGLKKKMMVLSSDDEDEN 180

Query: 183 EDSDGGGGDTKVGNKKRKKGKGSVSASAGGGSSSSIDHLKEILEDFMNQQMQMENQWREA 242
           +DSDG GG+TKV  +KRKK KG+    A G   SS++ LKEILEDFMNQQMQME QWREA
Sbjct: 181 DDSDGDGGETKVSGRKRKKVKGTTIGGAEGSGKSSMNELKEILEDFMNQQMQMEMQWREA 240

Query: 243 FEAREKERLMREMEWRRNMEALEHERIVLERGWREREEQRRMREEVRAEKRDALITTLLN 296
           FEAREKER M+EMEWRRNMEALEHERI+LER WREREEQRRMREEVRAEKRDALIT LLN
Sbjct: 241 FEAREKERQMKEMEWRRNMEALEHERIMLERRWREREEQRRMREEVRAEKRDALITALLN 300

BLAST of Sed0020330 vs. ExPASy TrEMBL
Match: A0A6J1CUR1 (trihelix transcription factor GT-3b-like OS=Momordica charantia OX=3673 GN=LOC111014958 PE=4 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 3.0e-117
Identity = 239/298 (80.20%), Postives = 262/298 (87.92%), Query Frame = 0

Query: 3   MEGHNPHHPLVQLHLQQQQ-LQHQPPHLHHSLGVAADQTAAATDRFPQWSIQETKEFLMI 62
           MEGH+PHHPL+ LH QQQQ LQH PPHLH +L +AADQ AAA DRFPQWSIQETKEFLMI
Sbjct: 1   MEGHHPHHPLLHLHHQQQQHLQHPPPHLHQNLPLAADQ-AAAADRFPQWSIQETKEFLMI 60

Query: 63  RAELDQNFMETKRNKLLWEFTASKMKEKGFNRSPDQCKCKWKNLVTRYKGCETMEPEISR 122
           RAELDQ FMETKRNKLLWE TASKMK+KGFNRS +QCKCKWKNLVTRYKGCETMEPEISR
Sbjct: 61  RAELDQAFMETKRNKLLWELTASKMKQKGFNRSAEQCKCKWKNLVTRYKGCETMEPEISR 120

Query: 123 QQFPFYTELQAIFGARMQRILLAEAESGGSGSKKKA---MAISSDEDEENEDSDGGGGDT 182
           QQFPFYTELQAIFGARMQRILLAEAESGGSGS+KK     A+SSD+DEEN+DS+ G  DT
Sbjct: 121 QQFPFYTELQAIFGARMQRILLAEAESGGSGSRKKTTTMAALSSDDDEENDDSE-GVADT 180

Query: 183 KVGNKKRKKGKGSVSASAGGGS-SSSIDHLKEILEDFMNQQMQMENQWREAFEAREKERL 242
           KV ++KRKK K   +A+ GGGS SSSI+HLKEILE+FMNQQMQME QWREAFEAREKER 
Sbjct: 181 KVSSRKRKKAK--AAATGGGGSGSSSINHLKEILEEFMNQQMQMEVQWREAFEAREKERQ 240

Query: 243 MREMEWRRNMEALEHERIVLERGWREREEQRRMREEVRAEKRDALITTLLNKLRRDDY 296
           +RE+EWRRNMEALE ER++LER WREREEQRR REE RA+KRDALIT LL KL R D+
Sbjct: 241 IREIEWRRNMEALEQERVMLERRWREREEQRRTREEARADKRDALITALLTKLSRSDH 294

BLAST of Sed0020330 vs. TAIR 10
Match: AT2G38250.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 276.2 bits (705), Expect = 3.1e-74
Identity = 168/299 (56.19%), Postives = 206/299 (68.90%), Query Frame = 0

Query: 3   MEGHNPHHPLVQLHLQQQQLQHQPPHLH-HSLGVAADQTAAATDRFPQWSIQETKEFLMI 62
           M+GH  HH    LH  Q   +H   HLH  S         A  DRFPQWS++ETKE + I
Sbjct: 1   MDGHQHHH----LHQLQYLNKH---HLHTQSQTPEIASPVAVGDRFPQWSVEETKELIGI 60

Query: 63  RAELDQNFMETKRNKLLWEFTASKMKEKGFNRSPDQCKCKWKNLVTRYKGCETMEPEISR 122
           R ELDQ FMETKRNKLLWE  ++KM++K F RSP+QCKCKWKNLVTR+KGCETME E +R
Sbjct: 61  RGELDQTFMETKRNKLLWEVISNKMRDKSFPRSPEQCKCKWKNLVTRFKGCETMEAETAR 120

Query: 123 QQFPFYTELQAIFGARMQRILLAEAESGGSGSKKKA--MAISSDEDEE--NEDSDGGGGD 182
           QQFPFY ++Q IF  RMQR+L AE+E GG G+   A     SSDE+EE  NE+      D
Sbjct: 121 QQFPFYDDMQNIFTTRMQRMLWAESEGGGGGTSGAARKREYSSDEEEENVNEELVDVSND 180

Query: 183 TKVGNKKR---KKGKGSVSASAGGGSSSSIDHLKEILEDFMNQQMQMENQWREAFEAREK 242
            K+ N K+   KK KG      G  SS+S + ++E+LE+FM  Q++ME++WRE +EAREK
Sbjct: 181 PKILNPKKNIAKKRKG------GSNSSNSNNGVREVLEEFMRHQVRMESEWREGWEAREK 240

Query: 243 ERLMREMEWRRNMEALEHERIVLERGWREREEQRRMREEVRAEKRDALITTLLNKLRRD 294
           ER  +E EWRR ME LE ER+ +ER WR+REEQRR REE+RAEKRD+LI  LL KL RD
Sbjct: 241 ERAEKEEEWRRKMEELEKERLAMERMWRDREEQRRSREEMRAEKRDSLINALLAKLTRD 286

BLAST of Sed0020330 vs. TAIR 10
Match: AT5G01380.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 252.3 bits (643), Expect = 4.8e-67
Identity = 153/306 (50.00%), Postives = 192/306 (62.75%), Query Frame = 0

Query: 6   HNPHHPLVQLHLQQQQLQHQPPHLHHSLGVAADQTAAATDRFPQWSIQETKEFLMIRAEL 65
           H+ HH  +  HL QQQ Q  PP L  +  +         +R PQWSI+ETKE L IR EL
Sbjct: 9   HHHHHHQLHHHLIQQQ-QLPPPPLSTTATMDPGGGGGGGERIPQWSIEETKELLAIREEL 68

Query: 66  DQNFMETKRNKLLWEFTASKMKEKGFNRSPDQCKCKWKNLVTRYKGCETMEPEISRQQFP 125
           DQ FMETKRNKLLWE  A+KM +KGF RS +QCK KWKNLVTRYK CET EP+  RQQFP
Sbjct: 69  DQTFMETKRNKLLWEVVAAKMADKGFVRSAEQCKSKWKNLVTRYKACETTEPDAIRQQFP 128

Query: 126 FYTELQAIFGARMQRILLAEAESGGSGSKKKAMAISSDEDEENEDSDGGGGD-------- 185
           FY E+Q+IF ARMQR+L +EA    + SK+K    SSD++EE  D      +        
Sbjct: 129 FYNEIQSIFEARMQRMLWSEATEPSTSSKRKHHQFSSDDEEEEVDEPNQDINEELLSLVE 188

Query: 186 ----------TKVGNKKRKKGKGSVSASAGGGSSSSIDHLKEILEDFMNQQMQMENQWRE 245
                     T      RK+ K     ++G  + ++ + LK+ILE+FM Q ++ME +WR+
Sbjct: 189 TQKRETEVITTSTSTNPRKRAKKGKGVASGTKAETAGNTLKDILEEFMRQTVKMEKEWRD 248

Query: 246 AFEAREKERLMREMEWRRNMEALEHERIVLERGWREREEQRRMREEVRAEKRDALITTLL 294
           A+E +E ER  RE EWRR M  LE ER   ER W EREE+RR+REE RA+KRD+LI  LL
Sbjct: 249 AWEMKEIEREKREKEWRRRMAELEEERAATERRWMEREEERRLREEARAQKRDSLIDALL 308

BLAST of Sed0020330 vs. TAIR 10
Match: AT3G25990.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 71.6 bits (174), Expect = 1.2e-12
Identity = 40/133 (30.08%), Postives = 70/133 (52.63%), Query Frame = 0

Query: 42  AATDRFPQWSIQETKEFLMIRAELDQNFMETKRNKLLWEFTASKMKEKGFNRSPDQCKCK 101
           A   R   W+  ET+  + +R E+D  F  +K NK LWE  + KM+EKGF+RSP  C  K
Sbjct: 47  APKKRAETWAQDETRTLISLRREMDNLFNTSKSNKHLWEQISKKMREKGFDRSPSMCTDK 106

Query: 102 WKNLVTRYKGCETMEPEIS---RQQFPFYTELQAIFGARMQRILLAEAESGGSGSKKKAM 161
           W+N++  +K  +  E + +     +  +Y E++ IF  R +++   ++ +  + S  K  
Sbjct: 107 WRNILKEFKKAKQHEDKATSGGSTKMSYYNEIEDIFRERKKKVAFYKSPATTTPSSAKVD 166

Query: 162 AISSDEDEENEDS 172
           +     D+  ED+
Sbjct: 167 SFMQFTDKGFEDT 179

BLAST of Sed0020330 vs. TAIR 10
Match: AT1G13450.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 70.5 bits (171), Expect = 2.6e-12
Identity = 47/139 (33.81%), Postives = 70/139 (50.36%), Query Frame = 0

Query: 3   MEGHNPHHPLVQLHLQQQQLQHQPPHLHHSLGVAADQTAAATDRFPQWSIQETKEFLMIR 62
           ++ H+ HH     HL Q Q Q Q   L  S G    +  A   R   W   ET+  +M R
Sbjct: 43  LQSHH-HHNHHNHHLHQSQPQQQ-ILLGESSG-EDHEVKAPKKRAETWVQDETRSLIMFR 102

Query: 63  AELDQNFMETKRNKLLWEFTASKMKEKGFNRSPDQCKCKWKNLVTRYKGCETMEPEISRQ 122
             +D  F  +K NK LWE  +SKM+EKGF+RSP  C  KW+NL+  +K  +  +      
Sbjct: 103 RGMDGLFNTSKSNKHLWEQISSKMREKGFDRSPTMCTDKWRNLLKEFKKAKHHDRGNGSA 162

Query: 123 QFPFYTELQAIFGARMQRI 142
           +  +Y E++ I   R +++
Sbjct: 163 KMSYYKEIEDILRERSKKV 178

BLAST of Sed0020330 vs. TAIR 10
Match: AT1G13450.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 70.5 bits (171), Expect = 2.6e-12
Identity = 47/139 (33.81%), Postives = 70/139 (50.36%), Query Frame = 0

Query: 3   MEGHNPHHPLVQLHLQQQQLQHQPPHLHHSLGVAADQTAAATDRFPQWSIQETKEFLMIR 62
           ++ H+ HH     HL Q Q Q Q   L  S G    +  A   R   W   ET+  +M R
Sbjct: 43  LQSHH-HHNHHNHHLHQSQPQQQ-ILLGESSG-EDHEVKAPKKRAETWVQDETRSLIMFR 102

Query: 63  AELDQNFMETKRNKLLWEFTASKMKEKGFNRSPDQCKCKWKNLVTRYKGCETMEPEISRQ 122
             +D  F  +K NK LWE  +SKM+EKGF+RSP  C  KW+NL+  +K  +  +      
Sbjct: 103 RGMDGLFNTSKSNKHLWEQISSKMREKGFDRSPTMCTDKWRNLLKEFKKAKHHDRGNGSA 162

Query: 123 QFPFYTELQAIFGARMQRI 142
           +  +Y E++ I   R +++
Sbjct: 163 KMSYYKEIEDILRERSKKV 178

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038903384.14.2e-12182.33trihelix transcription factor GT-3b-like isoform X1 [Benincasa hispida] >XP_0389... [more]
KAG6596342.14.3e-11880.07Trihelix transcription factor GT-3a, partial [Cucurbita argyrosperma subsp. soro... [more]
XP_023540206.14.3e-11879.80trihelix transcription factor GT-3b-like [Cucurbita pepo subsp. pepo][more]
KAG7027894.17.4e-11880.07Trihelix transcription factor GT-3a, partial [Cucurbita argyrosperma subsp. argy... [more]
XP_022963584.11.3e-11779.55trihelix transcription factor GT-3b [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
O804504.4e-7356.19Trihelix transcription factor GT-3b OS=Arabidopsis thaliana OX=3702 GN=GT-3B PE=... [more]
Q9SDW06.8e-6650.00Trihelix transcription factor GT-3a OS=Arabidopsis thaliana OX=3702 GN=GT-3A PE=... [more]
Q9LU921.6e-1130.08Trihelix transcription factor GT-4 OS=Arabidopsis thaliana OX=3702 GN=GT-4 PE=2 ... [more]
Q9FX533.7e-1133.81Trihelix transcription factor GT-1 OS=Arabidopsis thaliana OX=3702 GN=GT-1 PE=1 ... [more]
Q9C8823.9e-0522.73Trihelix transcription factor GTL1 OS=Arabidopsis thaliana OX=3702 GN=GTL1 PE=1 ... [more]
Match NameE-valueIdentityDescription
A0A6J1HKL66.1e-11879.55trihelix transcription factor GT-3b OS=Cucurbita moschata OX=3662 GN=LOC11146385... [more]
A0A6J1I3N72.3e-11778.96trihelix transcription factor GT-3b-like OS=Cucurbita maxima OX=3661 GN=LOC11147... [more]
E5GBE83.0e-11778.18Transcription factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
A0A5D3DMW33.0e-11778.18Trihelix transcription factor GT-3b OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A6J1CUR13.0e-11780.20trihelix transcription factor GT-3b-like OS=Momordica charantia OX=3673 GN=LOC11... [more]
Match NameE-valueIdentityDescription
AT2G38250.13.1e-7456.19Homeodomain-like superfamily protein [more]
AT5G01380.14.8e-6750.00Homeodomain-like superfamily protein [more]
AT3G25990.11.2e-1230.08Homeodomain-like superfamily protein [more]
AT1G13450.12.6e-1233.81Homeodomain-like superfamily protein [more]
AT1G13450.22.6e-1233.81Homeodomain-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 204..224
NoneNo IPR availableGENE3D1.10.10.60coord: 50..111
e-value: 2.9E-17
score: 64.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..204
NoneNo IPR availablePANTHERPTHR21654:SF85TRANSCRIPTION FACTOR MYB FAMILY-RELATEDcoord: 3..293
NoneNo IPR availablePANTHERPTHR21654FAMILY NOT NAMEDcoord: 3..293
NoneNo IPR availableCDDcd12203GT1coord: 48..113
e-value: 1.16947E-23
score: 89.6467
IPR044822Myb/SANT-like DNA-binding domain 4PFAMPF13837Myb_DNA-bind_4coord: 49..133
e-value: 1.1E-18
score: 67.3
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 50..106
score: 6.852724

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0020330.1Sed0020330.1mRNA