Sed0020325 (gene) Chayote v1

Overview


Name	Sed0020325
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein CHUP1, chloroplastic
Location	LG07: 10820592 .. 10824065 (-)
RNA-Seq Expression	Sed0020325
Synteny	Sed0020325

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGGGTTTAATCAGCCTATGACATGGACGAGAAAGCATCCAATCGAAATACTAGCTGTAGCCGATCAGGCCAACGCCAAAGCGTTACTCTCCCGCTGATTTCATGCGTTCCCAAATGCGTTTTTGTTATAAAATCGATGTAAGATCTCGACCCTTTTCATCGATCACTCATTTGGGTTTCGGTTGATTTTTCTTCTTTTCTCACGAATCTGAAATGGGGTTTGTTGATTTTTCATTCTCTCTTACGAATCTGAAATGGGGTTTATTTGATTTTTCATATTCTCACGAATCTGAAATGGGGTTTGGCTGATGTTTTGAAGTATCCCTTCTTTCTGCAGAACTTGATCGTTTGTATGTTTATTTGTTCTTTATTATGTGCTTTGCGTTCAAATGCTTCATCAGACTCTGTTTGTTCATGCAGATGAAGAATGATGAAGACGAAGACCTATGATATTGTTTGGTCATTTATTAGTTCATTTAAATTGATTAGATTGAAGGTTGTTTATATCCAACAATGGAGGGGAAGGGGGATTTGATGAAGCCTATATTATTCAAATTTGGGGTTGCTCTGGCTATCTCCTTTGCTGGTTTGATCTATTCTCGCTCCAAAATTAGGAAAAAAAGACCTCCTTTGCCTCCTCCCTCGTCGAGTTCTTCAGGTTCTTACGCTCAAACTTTTATGCTTCTTCAAGTTCTTGAAGTATTTTGAGTTCAACATTTGGGGTAGGGTTCAACCCTCCAAACTTTTGAGCTATTACAAGCTTTTAAATTATATATATTTCACTTGCTTTAAGCAGATGATCGGGACAATAAAGTTGACTTGGGAAGAGGAAGAGGACCTAAACTTGCTAATCAAGCAATGAAGGAAGCAACATCTGCATCTCCTAATGTTATTCTCTTTGCAACTGATGCTTATGTGAGTTTTCTAAAGATGGGTTTTTCATTTTAGTAATATGAATAATAGGTCCCCAAGGGGTGGCGCGGTGGTCGAAAGGCTTAGTTTTTGAAGGTGTGCTCTTTTAAAGGTCCCAAGTTTAAGACTTCCCTTTGACATTAATTTGTAAACAGCTCTCGTGTCTCCGTCGTGGTTATCTTGGGTATAGTGGAGTAAAGCTCCGATTTCTCGGCTTCAAAAAAAGAATAATTTAAGTAACTTAGAATGGACACAAGAAGCCGCATCATGTATAACCTAGTAACCATACATGTTTGAATCTCCTTCCCCCACCAAATGGAATAAAAAAAAATTGGAATGTTCAAAAAGTTAAGATTCCAGGTAGCTTTTATGAAGTTGGTTGTGAAAATTTAGTGTATTGAACCCATTTGTTCAATTGTTCTTTCTCAGCCTCTGTCCTAGATACAAAACGGACGTAGGAATGATTTCTTTCATCATGTTGGTTTTTGATAAAGGCATAAGCCTCATATTATGTGTTATGGTCTTTTCTAAGCCTTAGTTTGATTTCTTTCTCAGGAAGAAATGTGTATTCCAAAGGTCAATGTGAATAATTCAAATGTCAGTCTCTCTCCCAGCTATAAGAACATTGTAGATAAAGATGGGTTGCTTCTCCCAGAGTTTCAGGACCTTGTCAAGGAATTTGATCTTTCTGCAGCAAATGCTGGGGTTTCTCCTAACATAATTGTCGAATCACCAAGATTGGGACTCGAAACTCCGAAAGCTTATAAGACTGATGAGATGGATGAATATGATCAAGAGATCAGACACCTAAAAAGCAAGGTGAAAATGCTTCGAGAGAGGGAGAGAAACCTTGAGGTTCAGCTACTTGAGTATTATGGTCTGAAAGAGCAAGAAACTGCTGTCATAGAGCTCCAAAATAGGCTGAAGATTAACAATATGGAGGCTAAGCTTTTCACTCTCAAGATTGAGTCCCTTCAGGTGGATAATCGACGACTGGAATCACAAGTTTCCGATCATGCAAAATCAGTGTCCGACCTCGAGGCTGCAAGAGCAAAAATTAAGTTTCTCAAGAAAACACTTAGAAAAGAAGCAGAACAGAACAGGGCACAGATCTTAAATCTTCAGCAAAGAGTTGCTAAGCTGCTTGATCAAGAATACAAGACAAATGGAAACAATAAAGATGCCCAAATCAACCTTCAAAAGATTGAAGATTTGGAGAAAGAGATGGAGGACTTAAGAAAGTCGAATTTGAGATTACAAACAGAAAATTCTGATCTCGTTGGGAGATTAGATGCTACTCAATCTCTTGCAAATTCTATTTTAGAAGATCCAGAAGTGCGCTTCTCTTGCTACTAGCTATTTTACCTTCTTATAGATATTCATAAGTTGATTAAAAATTTAATGCAATATCCATATAATTTGTGCAGAAAGACTCACTTAAAGAAGAAAGGGATCGCTTGACACTAGAAAATGAGACGTTGACGAAGGAAATCGAGCAGCTTCAAGCTAACCGGTGTGCAGATGTTGAAGAGCTAGTCTATATCCGCTGGGTTAATGCTTGCTTAAGATATGAGCTGCGAAATTTTCAGCCTCCAGCAGGGAAAGCAGCAGCAAGAGACCTAAGCAAAACTGCAAGTCCCAAATCTGAGGAGAAAGTGAAGAAGCTCATTCTCGAGTATGCAAATACAGAAGGAATTGAAGGGAAGAGCATTAACATTATGGATTTCGATTCAGATCAATGCTCGTCCTCGCAAGCTTCCTCTCATACCGATCCTGGAGACCAAGATTATTTAGCTGTCGATTTTCCATCAACAGCCAAACCAAGTTCAAACAAAACCAAATTCATGAGTAAACTAAGGAAACTTTTGAGGGGAAAAGGTAGTCAACAAAACCTGGCTATGTTAGCAGAAAAATCTGCAACATCTGTAGAAGATAGTGATTCTCCACTTCACAGTTCAAGTAATTCTACTGGGACCAATGCTAGACAGGGTACTGGATATACAACGCCATCTCAATATTCACCAAGGCGATCAATGGATTTTCAAAGATTGAATAGCCAGAAGGAAGACAACATTAAAACAGAAGATTCCATTAGAAGGAATAGTGATGTTGGCTACACTAAAAAGAGCTTTGTTATACGATCTCCAAGTCAGGAAACAGAATGCACCAAGAAGTCCGAGTTGATGAAATATGCTGAAGCTTTGAAAGACACTCGGGGAGCTAAGAACCGGTCACTCCGTAAGGTTGCATCCATCAATTCGTTTTAATCATCAGAAAGCTTGTCTGGCTTTTGATGGCTTCATCACCTGCTCATATGAGTATTTTGTTAAGGGGCTGGGTAGTTAGTGACTACTGTTCACAAAAGGTGGGTAGAGAAACTAATTCCACTGATATGGGAACTTTGTAACATAAATAACTCAATGCTGTAATCTTACTTGAATGAGATTAACCTAACAAAACTAATCTTATCAAATGACCTGTTCTTGAACATTTTCAAAGCAAGGCATTTTGTATCGAGTTGATCCAATGTTTGGTACTAAATACAATAAAGTGCATTTCGT

mRNA sequence

ATTGGGTTTAATCAGCCTATGACATGGACGAGAAAGCATCCAATCGAAATACTAGCTGTAGCCGATCAGGCCAACGCCAAAGCGTTACTCTCCCGCTGATTTCATGCGTTCCCAAATGCGTTTTTGTTATAAAATCGATGTAAGATCTCGACCCTTTTCATCGATCACTCATTTGGGTTTCGGTTGATTTTTCTTCTTTTCTCACGAATCTGAAATGGGATGAAGAATGATGAAGACGAAGACCTATGATATTGTTTGGTCATTTATTAGTTCATTTAAATTGATTAGATTGAAGGTTGTTTATATCCAACAATGGAGGGGAAGGGGGATTTGATGAAGCCTATATTATTCAAATTTGGGGTTGCTCTGGCTATCTCCTTTGCTGGTTTGATCTATTCTCGCTCCAAAATTAGGAAAAAAAGACCTCCTTTGCCTCCTCCCTCGTCGAGTTCTTCAGATGATCGGGACAATAAAGTTGACTTGGGAAGAGGAAGAGGACCTAAACTTGCTAATCAAGCAATGAAGGAAGCAACATCTGCATCTCCTAATGTTATTCTCTTTGCAACTGATGCTTATGAAGAAATGTGTATTCCAAAGGTCAATGTGAATAATTCAAATGTCAGTCTCTCTCCCAGCTATAAGAACATTGTAGATAAAGATGGGTTGCTTCTCCCAGAGTTTCAGGACCTTGTCAAGGAATTTGATCTTTCTGCAGCAAATGCTGGGGTTTCTCCTAACATAATTGTCGAATCACCAAGATTGGGACTCGAAACTCCGAAAGCTTATAAGACTGATGAGATGGATGAATATGATCAAGAGATCAGACACCTAAAAAGCAAGGTGAAAATGCTTCGAGAGAGGGAGAGAAACCTTGAGGTTCAGCTACTTGAGTATTATGGTCTGAAAGAGCAAGAAACTGCTGTCATAGAGCTCCAAAATAGGCTGAAGATTAACAATATGGAGGCTAAGCTTTTCACTCTCAAGATTGAGTCCCTTCAGGTGGATAATCGACGACTGGAATCACAAGTTTCCGATCATGCAAAATCAGTGTCCGACCTCGAGGCTGCAAGAGCAAAAATTAAGTTTCTCAAGAAAACACTTAGAAAAGAAGCAGAACAGAACAGGGCACAGATCTTAAATCTTCAGCAAAGAGTTGCTAAGCTGCTTGATCAAGAATACAAGACAAATGGAAACAATAAAGATGCCCAAATCAACCTTCAAAAGATTGAAGATTTGGAGAAAGAGATGGAGGACTTAAGAAAGTCGAATTTGAGATTACAAACAGAAAATTCTGATCTCGTTGGGAGATTAGATGCTACTCAATCTCTTGCAAATTCTATTTTAGAAGATCCAGAAAAAGACTCACTTAAAGAAGAAAGGGATCGCTTGACACTAGAAAATGAGACGTTGACGAAGGAAATCGAGCAGCTTCAAGCTAACCGGTGTGCAGATGTTGAAGAGCTAGTCTATATCCGCTGGGTTAATGCTTGCTTAAGATATGAGCTGCGAAATTTTCAGCCTCCAGCAGGGAAAGCAGCAGCAAGAGACCTAAGCAAAACTGCAAGTCCCAAATCTGAGGAGAAAGTGAAGAAGCTCATTCTCGAGTATGCAAATACAGAAGGAATTGAAGGGAAGAGCATTAACATTATGGATTTCGATTCAGATCAATGCTCGTCCTCGCAAGCTTCCTCTCATACCGATCCTGGAGACCAAGATTATTTAGCTGTCGATTTTCCATCAACAGCCAAACCAAGTTCAAACAAAACCAAATTCATGAGTAAACTAAGGAAACTTTTGAGGGGAAAAGGTAGTCAACAAAACCTGGCTATGTTAGCAGAAAAATCTGCAACATCTGTAGAAGATAGTGATTCTCCACTTCACAGTTCAAGTAATTCTACTGGGACCAATGCTAGACAGGGTACTGGATATACAACGCCATCTCAATATTCACCAAGGCGATCAATGGATTTTCAAAGATTGAATAGCCAGAAGGAAGACAACATTAAAACAGAAGATTCCATTAGAAGGAATAGTGATGTTGGCTACACTAAAAAGAGCTTTGTTATACGATCTCCAAGTCAGGAAACAGAATGCACCAAGAAGTCCGAGTTGATGAAATATGCTGAAGCTTTGAAAGACACTCGGGGAGCTAAGAACCGGTCACTCCGTAAGGTTGCATCCATCAATTCGTTTTAATCATCAGAAAGCTTGTCTGGCTTTTGATGGCTTCATCACCTGCTCATATGAGTATTTTGTTAAGGGGCTGGGTAGTTAGTGACTACTGTTCACAAAAGGTGGGTAGAGAAACTAATTCCACTGATATGGGAACTTTGTAACATAAATAACTCAATGCTGTAATCTTACTTGAATGAGATTAACCTAACAAAACTAATCTTATCAAATGACCTGTTCTTGAACATTTTCAAAGCAAGGCATTTTGTATCGAGTTGATCCAATGTTTGGTACTAAATACAATAAAGTGCATTTCGT

Coding sequence (CDS)

ATGGAGGGGAAGGGGGATTTGATGAAGCCTATATTATTCAAATTTGGGGTTGCTCTGGCTATCTCCTTTGCTGGTTTGATCTATTCTCGCTCCAAAATTAGGAAAAAAAGACCTCCTTTGCCTCCTCCCTCGTCGAGTTCTTCAGATGATCGGGACAATAAAGTTGACTTGGGAAGAGGAAGAGGACCTAAACTTGCTAATCAAGCAATGAAGGAAGCAACATCTGCATCTCCTAATGTTATTCTCTTTGCAACTGATGCTTATGAAGAAATGTGTATTCCAAAGGTCAATGTGAATAATTCAAATGTCAGTCTCTCTCCCAGCTATAAGAACATTGTAGATAAAGATGGGTTGCTTCTCCCAGAGTTTCAGGACCTTGTCAAGGAATTTGATCTTTCTGCAGCAAATGCTGGGGTTTCTCCTAACATAATTGTCGAATCACCAAGATTGGGACTCGAAACTCCGAAAGCTTATAAGACTGATGAGATGGATGAATATGATCAAGAGATCAGACACCTAAAAAGCAAGGTGAAAATGCTTCGAGAGAGGGAGAGAAACCTTGAGGTTCAGCTACTTGAGTATTATGGTCTGAAAGAGCAAGAAACTGCTGTCATAGAGCTCCAAAATAGGCTGAAGATTAACAATATGGAGGCTAAGCTTTTCACTCTCAAGATTGAGTCCCTTCAGGTGGATAATCGACGACTGGAATCACAAGTTTCCGATCATGCAAAATCAGTGTCCGACCTCGAGGCTGCAAGAGCAAAAATTAAGTTTCTCAAGAAAACACTTAGAAAAGAAGCAGAACAGAACAGGGCACAGATCTTAAATCTTCAGCAAAGAGTTGCTAAGCTGCTTGATCAAGAATACAAGACAAATGGAAACAATAAAGATGCCCAAATCAACCTTCAAAAGATTGAAGATTTGGAGAAAGAGATGGAGGACTTAAGAAAGTCGAATTTGAGATTACAAACAGAAAATTCTGATCTCGTTGGGAGATTAGATGCTACTCAATCTCTTGCAAATTCTATTTTAGAAGATCCAGAAAAAGACTCACTTAAAGAAGAAAGGGATCGCTTGACACTAGAAAATGAGACGTTGACGAAGGAAATCGAGCAGCTTCAAGCTAACCGGTGTGCAGATGTTGAAGAGCTAGTCTATATCCGCTGGGTTAATGCTTGCTTAAGATATGAGCTGCGAAATTTTCAGCCTCCAGCAGGGAAAGCAGCAGCAAGAGACCTAAGCAAAACTGCAAGTCCCAAATCTGAGGAGAAAGTGAAGAAGCTCATTCTCGAGTATGCAAATACAGAAGGAATTGAAGGGAAGAGCATTAACATTATGGATTTCGATTCAGATCAATGCTCGTCCTCGCAAGCTTCCTCTCATACCGATCCTGGAGACCAAGATTATTTAGCTGTCGATTTTCCATCAACAGCCAAACCAAGTTCAAACAAAACCAAATTCATGAGTAAACTAAGGAAACTTTTGAGGGGAAAAGGTAGTCAACAAAACCTGGCTATGTTAGCAGAAAAATCTGCAACATCTGTAGAAGATAGTGATTCTCCACTTCACAGTTCAAGTAATTCTACTGGGACCAATGCTAGACAGGGTACTGGATATACAACGCCATCTCAATATTCACCAAGGCGATCAATGGATTTTCAAAGATTGAATAGCCAGAAGGAAGACAACATTAAAACAGAAGATTCCATTAGAAGGAATAGTGATGTTGGCTACACTAAAAAGAGCTTTGTTATACGATCTCCAAGTCAGGAAACAGAATGCACCAAGAAGTCCGAGTTGATGAAATATGCTGAAGCTTTGAAAGACACTCGGGGAGCTAAGAACCGGTCACTCCGTAAGGTTGCATCCATCAATTCGTTTTAA

Protein sequence

MEGKGDLMKPILFKFGVALAISFAGLIYSRSKIRKKRPPLPPPSSSSSDDRDNKVDLGRGRGPKLANQAMKEATSASPNVILFATDAYEEMCIPKVNVNNSNVSLSPSYKNIVDKDGLLLPEFQDLVKEFDLSAANAGVSPNIIVESPRLGLETPKAYKTDEMDEYDQEIRHLKSKVKMLRERERNLEVQLLEYYGLKEQETAVIELQNRLKINNMEAKLFTLKIESLQVDNRRLESQVSDHAKSVSDLEAARAKIKFLKKTLRKEAEQNRAQILNLQQRVAKLLDQEYKTNGNNKDAQINLQKIEDLEKEMEDLRKSNLRLQTENSDLVGRLDATQSLANSILEDPEKDSLKEERDRLTLENETLTKEIEQLQANRCADVEELVYIRWVNACLRYELRNFQPPAGKAAARDLSKTASPKSEEKVKKLILEYANTEGIEGKSINIMDFDSDQCSSSQASSHTDPGDQDYLAVDFPSTAKPSSNKTKFMSKLRKLLRGKGSQQNLAMLAEKSATSVEDSDSPLHSSSNSTGTNARQGTGYTTPSQYSPRRSMDFQRLNSQKEDNIKTEDSIRRNSDVGYTKKSFVIRSPSQETECTKKSELMKYAEALKDTRGAKNRSLRKVASINSF

Homology

[Close]

BLAST of Sed0020325 vs. NCBI nr
Match: XP_038898688.1 (protein CHUP1, chloroplastic [Benincasa hispida] >XP_038898689.1 protein CHUP1, chloroplastic [Benincasa hispida] >XP_038898690.1 protein CHUP1, chloroplastic [Benincasa hispida])

HSP 1 Score: 899.8 bits (2324), Expect = 1.3e-257
Identity = 502/642 (78.19%), Postives = 548/642 (85.36%), Query Frame = 0


Query: 1   MEGKGDLMKPILFKFGVALAISFAGLIYSRSKIRKKRPPLPPPSSSSSDDRDNKVDLGRG 60
           M+ K DLMKPILFKFG ALAISFAG + S+ ++R KRPPL PPSSSSSDD+ +KVDLGRG
Sbjct: 1   MDDKRDLMKPILFKFGFALAISFAGFLCSQFRLRNKRPPLLPPSSSSSDDQSSKVDLGRG 60

Query: 61  RGPKLANQAMKEATSASPNVILFATDAYEEMCIPKVNVNNSNVSLSPSYKNIVDKDGLLL 120
           RGP+L NQ +K AT+AS NV+ FA DAYE+ CIPKVN ++SN+ L PS K+ VDKDG LL
Sbjct: 61  RGPRLDNQGLKAATAASSNVVHFAVDAYEKKCIPKVNFDDSNIGLRPSNKHGVDKDG-LL 120

Query: 121 PEFQDLVKEFDLSAANAGVSPNIIVESPRLGLETPKAYKTDEMDEYDQEIRHLKSKVKML 180
           PEFQ+LVKEFD SAANAG+ P   VE+PR GLETPKAYKT E DEY+QEIRHLKSKVK L
Sbjct: 121 PEFQELVKEFDFSAANAGLPPKKNVEAPRSGLETPKAYKTVEDDEYEQEIRHLKSKVKTL 180

Query: 181 RERERNLEVQLLEYYGLKEQETAVIELQNRLKINNMEAKLFTLKIESLQVDNRRLESQVS 240
           RERERNLEVQLLEYYGLKEQETAV+ELQNRLKINNMEAKLFTLKIESLQ DNRRLESQV 
Sbjct: 181 RERERNLEVQLLEYYGLKEQETAVMELQNRLKINNMEAKLFTLKIESLQADNRRLESQVC 240

Query: 241 DHAKSVSDLEAARAKIKFLKKTLRKEAEQNRAQILNLQQRVAKLLDQEYKTNGNNKDAQI 300
           DHAKSVSDLEAA+AKIKFLKK +R EAEQNR QILNLQQRV KL DQE+KTN +NKDAQI
Sbjct: 241 DHAKSVSDLEAAKAKIKFLKKKIRYEAEQNRGQILNLQQRVVKLQDQEHKTNESNKDAQI 300

Query: 301 NLQKIEDLEKEMEDLRKSNLRLQTENSDLVGRLDATQSLANSILEDPEKDSLKEERDRLT 360
            LQKIE+LEKE+EDLRKSNL+LQ ENSDL  RLDATQ LANS+LED EK+SLKEE +RL+
Sbjct: 301 RLQKIEELEKEIEDLRKSNLKLQIENSDLSRRLDATQFLANSLLEDQEKESLKEEMERLS 360

Query: 361 LENETLTKEIEQLQANRCADVEELVYIRWVNACLRYELRNFQPPAGKAAARDLSKTASPK 420
            ENE LTKEIEQLQA+RCAD+EELVY+RW+NACLRYELRNFQPPAGK AARDLSKT SPK
Sbjct: 361 RENEALTKEIEQLQAHRCADIEELVYLRWINACLRYELRNFQPPAGKTAARDLSKTLSPK 420

Query: 421 SEEKVKKLILEYANTEGIEGKSINIMDFDSDQCSSSQASSHTDPGDQDYLAVDFPSTAKP 480
           SEEK KKLIL+YANTEGIEGKSINI DFDSDQ SSSQASSHTDPGD D  AVDFPSTAK 
Sbjct: 421 SEEKAKKLILDYANTEGIEGKSINITDFDSDQWSSSQASSHTDPGDPDDSAVDFPSTAKT 480

Query: 481 SSNKTKFMSKLRKLLRGKGSQQNLAMLAEKSATSVEDSDSPLHSSSNSTGTNAR----QG 540
           SSNK KF+SKLRKLLRGKGSQQNL +LAEKSA SVEDS SP +SSSNS GTNA     QG
Sbjct: 481 SSNKVKFISKLRKLLRGKGSQQNLTLLAEKSAASVEDSGSPRYSSSNSPGTNATRAEGQG 540

Query: 541 TGYTTPSQYSPRRSMDFQRLNSQKEDNIKTEDSI-RRNSDVGYTKKSFVI---------- 600
            GYTTPS+ S R SMDF RLNSQKED+ KTEDSI RRNSDVGY  K FV+          
Sbjct: 541 IGYTTPSRNSSRHSMDFHRLNSQKEDDGKTEDSIRRRNSDVGYVNKKFVLGSDESSNSSY 600

Query: 601 RSPSQETECTKKSELMKYAEALKDTRGAKNRSLRKVASINSF 628
           RS SQ+TE T+KSELMKYAE LKDTRGAKN+S RK ASI SF
Sbjct: 601 RSQSQDTESTEKSELMKYAEVLKDTRGAKNQSQRKAASIGSF 641

[Close]

BLAST of Sed0020325 vs. NCBI nr
Match: KAA0059471.1 (protein CHUP1 [Cucumis melo var. makuwa] >TYK03852.1 protein CHUP1 [Cucumis melo var. makuwa])

HSP 1 Score: 890.2 bits (2299), Expect = 1.0e-254
Identity = 492/641 (76.76%), Postives = 542/641 (84.56%), Query Frame = 0


Query: 1   MEGKGDLMKPILFKFGVALAISFAGLIYSRSKIRKKRPPLPPPSSSSSDDRDNKVDLGRG 60
           ME KG+LMKP+L KFGV LAISFA  +YSR +++ KRPPLPPP SSSSDD+ NKV+LGRG
Sbjct: 1   MEDKGNLMKPLLLKFGVVLAISFASFLYSRFRLKNKRPPLPPPLSSSSDDQGNKVNLGRG 60

Query: 61  RGPKLANQAMKEATSASPNVILFATDAYEEMCIPKVNVNNSNVSLSPSYKNIVDKDGLLL 120
           RGP+L NQ MK AT+AS NV+LFA DAYEEMCIPKVNV++SN+ L PS K+ VDKDGLLL
Sbjct: 61  RGPRLDNQGMKAATAASSNVVLFAVDAYEEMCIPKVNVDDSNLGLCPSNKHGVDKDGLLL 120

Query: 121 PEFQDLVKEFDLSAANAGVSPNIIVESPRLGLETPKAYKTDEMDEYDQEIRHLKSKVKML 180
           PEFQ+ VKEFDLSAANA  SP   VE+PR GLETPKAYKT E DEY+QEIRHLKSKVKML
Sbjct: 121 PEFQEHVKEFDLSAANAEFSPKKNVEAPRSGLETPKAYKTVEDDEYEQEIRHLKSKVKML 180

Query: 181 RERERNLEVQLLEYYGLKEQETAVIELQNRLKINNMEAKLFTLKIESLQVDNRRLESQVS 240
           RERERNLE QLLEYYGLKEQETAV+ELQNRLKINNMEAKLFT KIESL+ DNRRLESQV 
Sbjct: 181 RERERNLEFQLLEYYGLKEQETAVMELQNRLKINNMEAKLFTFKIESLEADNRRLESQVC 240

Query: 241 DHAKSVSDLEAARAKIKFLKKTLRKEAEQNRAQILNLQQRVAKLLDQEYKTNGNNKDAQI 300
           +HAK+VSDLEAARAKIKFLKK LR EAEQNR QILNLQQ+V KL DQE+KTN +NKDAQI
Sbjct: 241 NHAKTVSDLEAARAKIKFLKKKLRHEAEQNRRQILNLQQKVLKLQDQEHKTNESNKDAQI 300

Query: 301 NLQKIEDLEKEMEDLRKSNLRLQTENSDLVGRLDATQSLANSILEDPEKDSLKEERDRLT 360
            LQKIEDLEKE+E+LRK N RLQ ENSDL  RLDATQ LANS+LED EK+SLKEE +RLT
Sbjct: 301 KLQKIEDLEKEIEELRKLNSRLQIENSDLGRRLDATQFLANSLLEDQEKESLKEETERLT 360

Query: 361 LENETLTKEIEQLQANRCADVEELVYIRWVNACLRYELRNFQPPAGKAAARDLSKTASPK 420
            ENE LTKEIEQLQA+R ADVEELVY+RW+NACLRYELRNFQPPAGK AARDLSKT SPK
Sbjct: 361 QENEALTKEIEQLQAHRLADVEELVYLRWINACLRYELRNFQPPAGKTAARDLSKTLSPK 420

Query: 421 SEEKVKKLILEYANTEGIEGKSINIMDFDSDQCSSSQASSHTDPGDQDYLAVDFPSTAKP 480
           SEEK KKLIL+YANTEG EGK I++ DFDSDQ SSSQASSHTDPGD D  A +FPSTAK 
Sbjct: 421 SEEKAKKLILDYANTEGNEGKGISVTDFDSDQWSSSQASSHTDPGDPDDSAAEFPSTAKT 480

Query: 481 SSNKTKFMSKLRKLLRGKGSQQNLAMLAEKSATSVEDSDSPLHSSSNSTGTNAR----QG 540
           SSNK KF+ KL+KLLRGKGSQQNL +LAEKSA S+EDSDSP +SSSNSTGTNA     Q 
Sbjct: 481 SSNKIKFIGKLKKLLRGKGSQQNLTLLAEKSAASIEDSDSPCYSSSNSTGTNATRAEGQA 540

Query: 541 TGYTTPSQYSPRRSMDFQRLNSQKEDNIKTEDSIRRNSDVGYTKKSFVI----------R 600
            GY T S+ S R S+DFQRL+SQKED +KTEDS RRNSDVGY  K FV+          R
Sbjct: 541 IGYATSSRNSSRYSIDFQRLHSQKEDEVKTEDSARRNSDVGYVNKRFVLGSDQSSNSSDR 600

Query: 601 SPSQETECTKKSELMKYAEALKDTRGAKNRSLRKVASINSF 628
           S SQ+TE T+KSELMKYAE LKDTRGAKN+S RK ASI SF
Sbjct: 601 SQSQDTESTEKSELMKYAEVLKDTRGAKNQSHRKAASIGSF 641

[Close]

BLAST of Sed0020325 vs. NCBI nr
Match: XP_008462405.1 (PREDICTED: protein CHUP1, chloroplastic [Cucumis melo] >XP_008462406.1 PREDICTED: protein CHUP1, chloroplastic [Cucumis melo])

HSP 1 Score: 886.7 bits (2290), Expect = 1.2e-253
Identity = 491/641 (76.60%), Postives = 541/641 (84.40%), Query Frame = 0


Query: 1   MEGKGDLMKPILFKFGVALAISFAGLIYSRSKIRKKRPPLPPPSSSSSDDRDNKVDLGRG 60
           ME KG+LMKP+L KFGV LAISFA  +YSR +++ KRPPLPPP SSSSDD+ NKV+LGRG
Sbjct: 1   MEDKGNLMKPLLLKFGVVLAISFASFLYSRFRLKNKRPPLPPPLSSSSDDQGNKVNLGRG 60

Query: 61  RGPKLANQAMKEATSASPNVILFATDAYEEMCIPKVNVNNSNVSLSPSYKNIVDKDGLLL 120
           RGP+L NQ MK AT+AS NV+LFA DAYEEMCI KVNV++SN+ L PS K+ VDKDGLLL
Sbjct: 61  RGPRLDNQGMKAATAASSNVVLFAVDAYEEMCIRKVNVDDSNLGLCPSNKHGVDKDGLLL 120

Query: 121 PEFQDLVKEFDLSAANAGVSPNIIVESPRLGLETPKAYKTDEMDEYDQEIRHLKSKVKML 180
           PEFQ+ VKEFDLSAANA  SP   VE+PR GLETPKAYKT E DEY+QEIRHLKSKVKML
Sbjct: 121 PEFQEHVKEFDLSAANAEFSPKKNVEAPRSGLETPKAYKTVEDDEYEQEIRHLKSKVKML 180

Query: 181 RERERNLEVQLLEYYGLKEQETAVIELQNRLKINNMEAKLFTLKIESLQVDNRRLESQVS 240
           RERERNLE QLLEYYGLKEQETAV+ELQNRLKINNMEAKLFT KIESL+ DNRRLESQV 
Sbjct: 181 RERERNLEFQLLEYYGLKEQETAVMELQNRLKINNMEAKLFTFKIESLEADNRRLESQVC 240

Query: 241 DHAKSVSDLEAARAKIKFLKKTLRKEAEQNRAQILNLQQRVAKLLDQEYKTNGNNKDAQI 300
           +HAK+VSDLEAARAKIKFLKK LR EAEQNR QILNLQQ+V KL DQE+KTN +NKDAQI
Sbjct: 241 NHAKTVSDLEAARAKIKFLKKKLRHEAEQNRRQILNLQQKVLKLQDQEHKTNESNKDAQI 300

Query: 301 NLQKIEDLEKEMEDLRKSNLRLQTENSDLVGRLDATQSLANSILEDPEKDSLKEERDRLT 360
            LQKIEDLEKE+E+LRK N RLQ ENSDL  RLDATQ LANS+LED EK+SLKEE +RLT
Sbjct: 301 KLQKIEDLEKEIEELRKLNSRLQIENSDLGRRLDATQFLANSLLEDQEKESLKEETERLT 360

Query: 361 LENETLTKEIEQLQANRCADVEELVYIRWVNACLRYELRNFQPPAGKAAARDLSKTASPK 420
            ENE LTKEIEQLQA+R ADVEELVY+RW+NACLRYELRNFQPPAGK AARDLSKT SPK
Sbjct: 361 QENEALTKEIEQLQAHRLADVEELVYLRWINACLRYELRNFQPPAGKTAARDLSKTLSPK 420

Query: 421 SEEKVKKLILEYANTEGIEGKSINIMDFDSDQCSSSQASSHTDPGDQDYLAVDFPSTAKP 480
           SEEK KKLIL+YANTEG EGK I++ DFDSDQ SSSQASSHTDPGD D  A +FPSTAK 
Sbjct: 421 SEEKAKKLILDYANTEGNEGKGISVTDFDSDQWSSSQASSHTDPGDPDDSAAEFPSTAKT 480

Query: 481 SSNKTKFMSKLRKLLRGKGSQQNLAMLAEKSATSVEDSDSPLHSSSNSTGTNAR----QG 540
           SSNK KF+ KL+KLLRGKGSQQNL +LAEKSA S+EDSDSP +SSSNSTGTNA     Q 
Sbjct: 481 SSNKIKFIGKLKKLLRGKGSQQNLTLLAEKSAASIEDSDSPCYSSSNSTGTNATRAEGQA 540

Query: 541 TGYTTPSQYSPRRSMDFQRLNSQKEDNIKTEDSIRRNSDVGYTKKSFVI----------R 600
            GY T S+ S R S+DFQRL+SQKED +KTEDS RRNSDVGY  K FV+          R
Sbjct: 541 IGYATSSRNSSRYSIDFQRLHSQKEDEVKTEDSARRNSDVGYVNKRFVLGSDQSSNSSDR 600

Query: 601 SPSQETECTKKSELMKYAEALKDTRGAKNRSLRKVASINSF 628
           S SQ+TE T+KSELMKYAE LKDTRGAKN+S RK ASI SF
Sbjct: 601 SQSQDTESTEKSELMKYAEVLKDTRGAKNQSHRKAASIGSF 641

[Close]

BLAST of Sed0020325 vs. NCBI nr
Match: XP_004141788.1 (protein CHUP1, chloroplastic isoform X2 [Cucumis sativus] >KGN45575.1 hypothetical protein Csa_015974 [Cucumis sativus])

HSP 1 Score: 865.5 bits (2235), Expect = 2.7e-247
Identity = 483/641 (75.35%), Postives = 531/641 (82.84%), Query Frame = 0


Query: 1   MEGKGDLMKPILFKFGVALAISFAGLIYSRSKIRKKRPPLPPPSSSSSDDRDNKVDLGRG 60
           ME KG+L +PILFKFGV LAISFAG +YSR +++ KRPPLPPPS SSSDD+ NKV+LGRG
Sbjct: 1   MEDKGNLRRPILFKFGVVLAISFAGFLYSRFRLKNKRPPLPPPSYSSSDDQGNKVNLGRG 60

Query: 61  RGPKLANQAMKEATSASPNVILFATDAYEEMCIPKVNVNNSNVSLSPSYKNIVDKDGLLL 120
           RGP+L  Q          NV+LFA DAYEE CIPKVN ++SN+ L PS K+ VDKDGLL 
Sbjct: 61  RGPRLDKQ------GTPSNVVLFAVDAYEETCIPKVNFDDSNLGLCPSNKHGVDKDGLLP 120

Query: 121 PEFQDLVKEFDLSAANAGVSPNIIVESPRLGLETPKAYKTDEMDEYDQEIRHLKSKVKML 180
           PEFQ+L+KEFDLSAANA  S    VE+PR GLETPKAYKT E DEY+QEIR+LKSKVKML
Sbjct: 121 PEFQELLKEFDLSAANAEFSSKKNVEAPRYGLETPKAYKTVENDEYEQEIRYLKSKVKML 180

Query: 181 RERERNLEVQLLEYYGLKEQETAVIELQNRLKINNMEAKLFTLKIESLQVDNRRLESQVS 240
           RERERNLEVQLLEYYGLKEQETAV+ELQNRLKINNMEAKLFT KIESL+ DNRRLESQV 
Sbjct: 181 RERERNLEVQLLEYYGLKEQETAVMELQNRLKINNMEAKLFTFKIESLEADNRRLESQVC 240

Query: 241 DHAKSVSDLEAARAKIKFLKKTLRKEAEQNRAQILNLQQRVAKLLDQEYKTNGNNKDAQI 300
           DHAKSVSDLEAARAKIKFLKK LR EAEQNR QILNLQ+RV KL DQE+KTN +NKDAQI
Sbjct: 241 DHAKSVSDLEAARAKIKFLKKKLRYEAEQNRGQILNLQKRVLKLQDQEHKTNQSNKDAQI 300

Query: 301 NLQKIEDLEKEMEDLRKSNLRLQTENSDLVGRLDATQSLANSILEDPEKDSLKEERDRLT 360
            LQKIEDLEKE+E+LRKSNLRL+ ENSDL  RLDATQ LANS+LED EK+SLKEE +RLT
Sbjct: 301 KLQKIEDLEKEIEELRKSNLRLEIENSDLGRRLDATQFLANSLLEDQEKESLKEETERLT 360

Query: 361 LENETLTKEIEQLQANRCADVEELVYIRWVNACLRYELRNFQPPAGKAAARDLSKTASPK 420
            ENE LTKEIEQLQA+R ADVEELVY+RW+NACLRYELRNFQPPAGK AARDLSKT SPK
Sbjct: 361 RENEALTKEIEQLQAHRLADVEELVYLRWINACLRYELRNFQPPAGKTAARDLSKTLSPK 420

Query: 421 SEEKVKKLILEYANTEGIEGKSINIMDFDSDQCSSSQASSHTDPGDQDYLAVDFPSTAKP 480
           SEEK KKLIL+YANTEG EGKS+N+ DFDSDQ SSSQASSHTDPGD D    DFPSTAK 
Sbjct: 421 SEEKAKKLILDYANTEGNEGKSMNVTDFDSDQWSSSQASSHTDPGDPDDSTTDFPSTAKT 480

Query: 481 SSNKTKFMSKLRKLLRGKGSQQNLAMLAEKSATSVEDSDSPLHSSSNSTGTNAR----QG 540
            SNK KF+SKLRKLL+GKGSQQN+ +LAEKSA SVEDSDSP +S+SNSTGTNA     Q 
Sbjct: 481 GSNKIKFISKLRKLLKGKGSQQNMTLLAEKSAASVEDSDSPCYSTSNSTGTNATRAEGQA 540

Query: 541 TGYTTPSQYSPRRSMDFQRLNSQKEDNIKTEDSIRRNSDVGYTKKSFVI----------R 600
            GY TP   S   SMDF RL SQKED++K EDSIRRNSDVG   K FV+          R
Sbjct: 541 IGYATPLLNSSGHSMDFHRLQSQKEDDVKIEDSIRRNSDVGCVNKRFVVGSDQLSDSSYR 600

Query: 601 SPSQETECTKKSELMKYAEALKDTRGAKNRSLRKVASINSF 628
           S +Q+TE T+KSELMKYAE LKDTRGAKNRS RK ASI SF
Sbjct: 601 SQNQDTESTEKSELMKYAEVLKDTRGAKNRSHRKTASIGSF 635

[Close]

BLAST of Sed0020325 vs. NCBI nr
Match: XP_031744947.1 (protein CHUP1, chloroplastic isoform X1 [Cucumis sativus] >XP_031744948.1 protein CHUP1, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 862.1 bits (2226), Expect = 3.0e-246
Identity = 483/642 (75.23%), Postives = 532/642 (82.87%), Query Frame = 0


Query: 1   MEGKGDLMKPILFKFGVALAISFAGLIYSRSKIRKKRPPLPPPS-SSSSDDRDNKVDLGR 60
           ME KG+L +PILFKFGV LAISFAG +YSR +++ KRPPLPPPS SSS+DD+ NKV+LGR
Sbjct: 1   MEDKGNLRRPILFKFGVVLAISFAGFLYSRFRLKNKRPPLPPPSYSSSADDQGNKVNLGR 60

Query: 61  GRGPKLANQAMKEATSASPNVILFATDAYEEMCIPKVNVNNSNVSLSPSYKNIVDKDGLL 120
           GRGP+L  Q          NV+LFA DAYEE CIPKVN ++SN+ L PS K+ VDKDGLL
Sbjct: 61  GRGPRLDKQ------GTPSNVVLFAVDAYEETCIPKVNFDDSNLGLCPSNKHGVDKDGLL 120

Query: 121 LPEFQDLVKEFDLSAANAGVSPNIIVESPRLGLETPKAYKTDEMDEYDQEIRHLKSKVKM 180
            PEFQ+L+KEFDLSAANA  S    VE+PR GLETPKAYKT E DEY+QEIR+LKSKVKM
Sbjct: 121 PPEFQELLKEFDLSAANAEFSSKKNVEAPRYGLETPKAYKTVENDEYEQEIRYLKSKVKM 180

Query: 181 LRERERNLEVQLLEYYGLKEQETAVIELQNRLKINNMEAKLFTLKIESLQVDNRRLESQV 240
           LRERERNLEVQLLEYYGLKEQETAV+ELQNRLKINNMEAKLFT KIESL+ DNRRLESQV
Sbjct: 181 LRERERNLEVQLLEYYGLKEQETAVMELQNRLKINNMEAKLFTFKIESLEADNRRLESQV 240

Query: 241 SDHAKSVSDLEAARAKIKFLKKTLRKEAEQNRAQILNLQQRVAKLLDQEYKTNGNNKDAQ 300
            DHAKSVSDLEAARAKIKFLKK LR EAEQNR QILNLQ+RV KL DQE+KTN +NKDAQ
Sbjct: 241 CDHAKSVSDLEAARAKIKFLKKKLRYEAEQNRGQILNLQKRVLKLQDQEHKTNQSNKDAQ 300

Query: 301 INLQKIEDLEKEMEDLRKSNLRLQTENSDLVGRLDATQSLANSILEDPEKDSLKEERDRL 360
           I LQKIEDLEKE+E+LRKSNLRL+ ENSDL  RLDATQ LANS+LED EK+SLKEE +RL
Sbjct: 301 IKLQKIEDLEKEIEELRKSNLRLEIENSDLGRRLDATQFLANSLLEDQEKESLKEETERL 360

Query: 361 TLENETLTKEIEQLQANRCADVEELVYIRWVNACLRYELRNFQPPAGKAAARDLSKTASP 420
           T ENE LTKEIEQLQA+R ADVEELVY+RW+NACLRYELRNFQPPAGK AARDLSKT SP
Sbjct: 361 TRENEALTKEIEQLQAHRLADVEELVYLRWINACLRYELRNFQPPAGKTAARDLSKTLSP 420

Query: 421 KSEEKVKKLILEYANTEGIEGKSINIMDFDSDQCSSSQASSHTDPGDQDYLAVDFPSTAK 480
           KSEEK KKLIL+YANTEG EGKS+N+ DFDSDQ SSSQASSHTDPGD D    DFPSTAK
Sbjct: 421 KSEEKAKKLILDYANTEGNEGKSMNVTDFDSDQWSSSQASSHTDPGDPDDSTTDFPSTAK 480

Query: 481 PSSNKTKFMSKLRKLLRGKGSQQNLAMLAEKSATSVEDSDSPLHSSSNSTGTNAR----Q 540
             SNK KF+SKLRKLL+GKGSQQN+ +LAEKSA SVEDSDSP +S+SNSTGTNA     Q
Sbjct: 481 TGSNKIKFISKLRKLLKGKGSQQNMTLLAEKSAASVEDSDSPCYSTSNSTGTNATRAEGQ 540

Query: 541 GTGYTTPSQYSPRRSMDFQRLNSQKEDNIKTEDSIRRNSDVGYTKKSFVI---------- 600
             GY TP   S   SMDF RL SQKED++K EDSIRRNSDVG   K FV+          
Sbjct: 541 AIGYATPLLNSSGHSMDFHRLQSQKEDDVKIEDSIRRNSDVGCVNKRFVVGSDQLSDSSY 600

Query: 601 RSPSQETECTKKSELMKYAEALKDTRGAKNRSLRKVASINSF 628
           RS +Q+TE T+KSELMKYAE LKDTRGAKNRS RK ASI SF
Sbjct: 601 RSQNQDTESTEKSELMKYAEVLKDTRGAKNRSHRKTASIGSF 636

[Close]

BLAST of Sed0020325 vs. ExPASy Swiss-Prot
Match: Q9LI74 (Protein CHUP1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CHUP1 PE=1 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 8.8e-55
Identity = 173/520 (33.27%), Postives = 276/520 (53.08%), Query Frame = 0


Query: 14  KFGVALAISFAGLIYSRSKIRKKRPPLPPPSSSSSDDRDNKVDLGRGRGPKLANQAMKEA 73
           + G  +A S A +   R  ++  +P   P  +    D++  VD       K   +  +E 
Sbjct: 4   RIGFVVAASIAAVTVKRLNVKPSKPS-KPSDNGEGGDKEQSVDPDYNLNDKNLQEEEEEE 63

Query: 74  TSASPNVILFATDAYEEMCIPKVNVNNSNVSLSPSYKNIVDKDGLLLPEFQDLVK---EF 133
                          EE+ +    +N +      S+ + +D D  +LPEF+DL+    E+
Sbjct: 64  E--------------EEVKLINSVINQTR----GSFSDYLDDD--ILPEFEDLLSGEIEY 123

Query: 134 DLSAANAGVSPNIIVESPRLGLETPKAYKTDEMDEYDQEIRHLKSKVKMLRERERNLEVQ 193
            L   +  +             E  + Y+  EM   D E+  LK  VK L ERE  LE +
Sbjct: 124 PLPDDDNNLEK----------AEKERKYEV-EMAYNDGELERLKQLVKELEEREVKLEGE 183

Query: 194 LLEYYGLKEQETAVIELQNRLKINNMEAKLFTLKIESLQVDNRRLESQVSDHAKSVSDLE 253
           LLEYYGLKEQE+ ++ELQ +LKI  +E  +  + I SLQ + ++L+ ++S +     +LE
Sbjct: 184 LLEYYGLKEQESDIVELQRQLKIKTVEIDMLNITINSLQAERKKLQEELSQNGIVRKELE 243

Query: 254 AARAKIKFLKKTLRKEAEQNRAQILNLQQRVAKLLDQEYKTNGNNKDAQINLQKIEDLEK 313
            AR KIK L++ ++ +A Q + Q+L L+Q V+ L  +E +    + + +  L+ ++DLE 
Sbjct: 244 VARNKIKELQRQIQLDANQTKGQLLLLKQHVSSLQMKEEEAMNKDTEVERKLKAVQDLEV 303

Query: 314 EMEDLRKSNLRLQTENSDLVGRLDATQSLANSILEDPEKD---SLKEERDRLTLENETLT 373
           ++ +L++ N  LQ E  +L  +LD+ ++   ++    E D    ++EE + L   NE L 
Sbjct: 304 QVMELKRKNRELQHEKRELSIKLDSAEARIATLSNMTESDKVAKVREEVNNLKHNNEDLL 363

Query: 374 KEIEQLQANRCADVEELVYIRWVNACLRYELRNFQPPAGKAAARDLSKTASPKSEEKVKK 433
           K++E LQ NR ++VEELVY+RWVNACLRYELRN+Q PAGK +ARDLSK  SPKS+ K K+
Sbjct: 364 KQVEGLQMNRFSEVEELVYLRWVNACLRYELRNYQTPAGKISARDLSKNLSPKSQAKAKR 423

Query: 434 LILEYANTEGIEGKSINIMDFDSDQCSSSQASSHTDPGDQDYLAVDFPSTAKPSSNKTKF 493
           L+LEYA +E  +G +    D +S+    SQ SS   PG  D+      S+    S+ +K 
Sbjct: 424 LMLEYAGSERGQGDT----DLESNY---SQPSS---PGSDDFDNASMDSSTSRFSSFSKK 481

Query: 494 MSKLRKLLRGKGSQQNLAMLAEKSATSVEDSDSPLHSSSN 528
              ++KL +   S+ + ++ +  S +    S   L SS N
Sbjct: 484 PGLIQKLKKWGKSKDDSSVQSSPSRSFYGGSPGRLSSSMN 481

[Close]

BLAST of Sed0020325 vs. ExPASy Swiss-Prot
Match: Q3V6T2 (Girdin OS=Homo sapiens OX=9606 GN=CCDC88A PE=1 SV=2)

HSP 1 Score: 48.9 bits (115), Expect = 2.4e-04
Identity = 63/229 (27.51%), Postives = 119/229 (51.97%), Query Frame = 0


Query: 159 KTDEMDEYDQEIRHLKSKVKMLRERERNLEVQLLEYYGLKEQETAVIELQNR-LKINNME 218
           K +  +E + E+ HL+ + ++L+++  NL++   +   L EQE + +E +NR LK     
Sbjct: 623 KGERAEELENELHHLEKENELLQKKITNLKITCEKIEAL-EQENSELERENRKLKKTLDS 682

Query: 219 AKLFTLKIESLQVDNRRLESQVSDHAKSVSDLEAARAKIKFLK---KTLRKEAEQNR--A 278
            K  T ++ESL+ +N +L+ +  +  ++V  L+ A  K+  L+   K L  E EQ +   
Sbjct: 683 FKNLTFQLESLEKENSQLDEENLELRRNVESLKCASMKMAQLQLENKELESEKEQLKKGL 742

Query: 279 QILNLQQRVAKLLDQEYK-TNGNNKDAQINLQ----KIEDLEKEMEDLRKSNLRLQTENS 338
           ++L    +  + L+  Y+  +  N+  Q  L+    KI+ LE E++DL   N  LQ    
Sbjct: 743 ELLKASFKKTERLEVSYQGLDIENQRLQKTLENSNKKIQQLESELQDLEMENQTLQKNLE 802

Query: 339 DLVGRLDATQSLANSILEDPEKD--SLKEERDRLTLENETLTKEIEQLQ 375
           +L         +++  LE  EK+  SL++E  +L  + + L KE ++L+
Sbjct: 803 EL--------KISSKRLEQLEKENKSLEQETSQLEKDKKQLEKENKRLR 842

[Close]

BLAST of Sed0020325 vs. ExPASy Swiss-Prot
Match: Q5SNZ0 (Girdin OS=Mus musculus OX=10090 GN=Ccdc88a PE=1 SV=2)

HSP 1 Score: 47.8 bits (112), Expect = 5.4e-04
Identity = 61/229 (26.64%), Postives = 118/229 (51.53%), Query Frame = 0


Query: 159 KTDEMDEYDQEIRHLKSKVKMLRERERNLEVQLLEYYGLKEQETAVIELQNRLKINNMEA 218
           K +  +E + E+ HL  + ++L+++  NL++   E     EQE + +E +NR     +++
Sbjct: 623 KGERAEELENELNHLGKENELLQKKITNLKI-TCEKLETLEQENSELERENRKFKKTLDS 682

Query: 219 -KLFTLKIESLQVDNRRLESQVSDHAKSVSDLEAA---RAKIKFLKKTLRKEAEQNR--A 278
            K  T ++ESL+ +N +L+ +  +  +SV  L+ A    A+++   K L  E EQ R   
Sbjct: 683 FKNLTFQLESLEKENSQLDEENLELRRSVESLKCASMRMAQLQLENKELESEKEQLRKGL 742

Query: 279 QILNLQQRVAKLLDQEYK-TNGNNKDAQINLQ----KIEDLEKEMEDLRKSNLRLQTENS 338
           +++    +  + L+  Y+  +  N+  Q  L+    KI+ LE E++DL   N  LQ    
Sbjct: 743 ELMRASFKKTERLEVSYQGLDTENQRLQKALENSNKKIQQLESELQDLEMENQTLQKSLE 802

Query: 339 DLVGRLDATQSLANSILEDPEKD--SLKEERDRLTLENETLTKEIEQLQ 375
           +L         +++  LE  EK+  SL++E  +L  + + L KE ++L+
Sbjct: 803 EL--------KISSKRLEQLEKENKSLEQETSQLEKDKKQLEKENKRLR 842

[Close]

BLAST of Sed0020325 vs. ExPASy TrEMBL
Match: A0A5A7V182 (Protein CHUP1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00460 PE=4 SV=1)

HSP 1 Score: 890.2 bits (2299), Expect = 5.0e-255
Identity = 492/641 (76.76%), Postives = 542/641 (84.56%), Query Frame = 0


Query: 1   MEGKGDLMKPILFKFGVALAISFAGLIYSRSKIRKKRPPLPPPSSSSSDDRDNKVDLGRG 60
           ME KG+LMKP+L KFGV LAISFA  +YSR +++ KRPPLPPP SSSSDD+ NKV+LGRG
Sbjct: 1   MEDKGNLMKPLLLKFGVVLAISFASFLYSRFRLKNKRPPLPPPLSSSSDDQGNKVNLGRG 60

Query: 61  RGPKLANQAMKEATSASPNVILFATDAYEEMCIPKVNVNNSNVSLSPSYKNIVDKDGLLL 120
           RGP+L NQ MK AT+AS NV+LFA DAYEEMCIPKVNV++SN+ L PS K+ VDKDGLLL
Sbjct: 61  RGPRLDNQGMKAATAASSNVVLFAVDAYEEMCIPKVNVDDSNLGLCPSNKHGVDKDGLLL 120

Query: 121 PEFQDLVKEFDLSAANAGVSPNIIVESPRLGLETPKAYKTDEMDEYDQEIRHLKSKVKML 180
           PEFQ+ VKEFDLSAANA  SP   VE+PR GLETPKAYKT E DEY+QEIRHLKSKVKML
Sbjct: 121 PEFQEHVKEFDLSAANAEFSPKKNVEAPRSGLETPKAYKTVEDDEYEQEIRHLKSKVKML 180

Query: 181 RERERNLEVQLLEYYGLKEQETAVIELQNRLKINNMEAKLFTLKIESLQVDNRRLESQVS 240
           RERERNLE QLLEYYGLKEQETAV+ELQNRLKINNMEAKLFT KIESL+ DNRRLESQV 
Sbjct: 181 RERERNLEFQLLEYYGLKEQETAVMELQNRLKINNMEAKLFTFKIESLEADNRRLESQVC 240

Query: 241 DHAKSVSDLEAARAKIKFLKKTLRKEAEQNRAQILNLQQRVAKLLDQEYKTNGNNKDAQI 300
           +HAK+VSDLEAARAKIKFLKK LR EAEQNR QILNLQQ+V KL DQE+KTN +NKDAQI
Sbjct: 241 NHAKTVSDLEAARAKIKFLKKKLRHEAEQNRRQILNLQQKVLKLQDQEHKTNESNKDAQI 300

Query: 301 NLQKIEDLEKEMEDLRKSNLRLQTENSDLVGRLDATQSLANSILEDPEKDSLKEERDRLT 360
            LQKIEDLEKE+E+LRK N RLQ ENSDL  RLDATQ LANS+LED EK+SLKEE +RLT
Sbjct: 301 KLQKIEDLEKEIEELRKLNSRLQIENSDLGRRLDATQFLANSLLEDQEKESLKEETERLT 360

Query: 361 LENETLTKEIEQLQANRCADVEELVYIRWVNACLRYELRNFQPPAGKAAARDLSKTASPK 420
            ENE LTKEIEQLQA+R ADVEELVY+RW+NACLRYELRNFQPPAGK AARDLSKT SPK
Sbjct: 361 QENEALTKEIEQLQAHRLADVEELVYLRWINACLRYELRNFQPPAGKTAARDLSKTLSPK 420

Query: 421 SEEKVKKLILEYANTEGIEGKSINIMDFDSDQCSSSQASSHTDPGDQDYLAVDFPSTAKP 480
           SEEK KKLIL+YANTEG EGK I++ DFDSDQ SSSQASSHTDPGD D  A +FPSTAK 
Sbjct: 421 SEEKAKKLILDYANTEGNEGKGISVTDFDSDQWSSSQASSHTDPGDPDDSAAEFPSTAKT 480

Query: 481 SSNKTKFMSKLRKLLRGKGSQQNLAMLAEKSATSVEDSDSPLHSSSNSTGTNAR----QG 540
           SSNK KF+ KL+KLLRGKGSQQNL +LAEKSA S+EDSDSP +SSSNSTGTNA     Q 
Sbjct: 481 SSNKIKFIGKLKKLLRGKGSQQNLTLLAEKSAASIEDSDSPCYSSSNSTGTNATRAEGQA 540

Query: 541 TGYTTPSQYSPRRSMDFQRLNSQKEDNIKTEDSIRRNSDVGYTKKSFVI----------R 600
            GY T S+ S R S+DFQRL+SQKED +KTEDS RRNSDVGY  K FV+          R
Sbjct: 541 IGYATSSRNSSRYSIDFQRLHSQKEDEVKTEDSARRNSDVGYVNKRFVLGSDQSSNSSDR 600

Query: 601 SPSQETECTKKSELMKYAEALKDTRGAKNRSLRKVASINSF 628
           S SQ+TE T+KSELMKYAE LKDTRGAKN+S RK ASI SF
Sbjct: 601 SQSQDTESTEKSELMKYAEVLKDTRGAKNQSHRKAASIGSF 641

[Close]

BLAST of Sed0020325 vs. ExPASy TrEMBL
Match: A0A1S3CGW9 (protein CHUP1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103500772 PE=4 SV=1)

HSP 1 Score: 886.7 bits (2290), Expect = 5.6e-254
Identity = 491/641 (76.60%), Postives = 541/641 (84.40%), Query Frame = 0


Query: 1   MEGKGDLMKPILFKFGVALAISFAGLIYSRSKIRKKRPPLPPPSSSSSDDRDNKVDLGRG 60
           ME KG+LMKP+L KFGV LAISFA  +YSR +++ KRPPLPPP SSSSDD+ NKV+LGRG
Sbjct: 1   MEDKGNLMKPLLLKFGVVLAISFASFLYSRFRLKNKRPPLPPPLSSSSDDQGNKVNLGRG 60

Query: 61  RGPKLANQAMKEATSASPNVILFATDAYEEMCIPKVNVNNSNVSLSPSYKNIVDKDGLLL 120
           RGP+L NQ MK AT+AS NV+LFA DAYEEMCI KVNV++SN+ L PS K+ VDKDGLLL
Sbjct: 61  RGPRLDNQGMKAATAASSNVVLFAVDAYEEMCIRKVNVDDSNLGLCPSNKHGVDKDGLLL 120

Query: 121 PEFQDLVKEFDLSAANAGVSPNIIVESPRLGLETPKAYKTDEMDEYDQEIRHLKSKVKML 180
           PEFQ+ VKEFDLSAANA  SP   VE+PR GLETPKAYKT E DEY+QEIRHLKSKVKML
Sbjct: 121 PEFQEHVKEFDLSAANAEFSPKKNVEAPRSGLETPKAYKTVEDDEYEQEIRHLKSKVKML 180

Query: 181 RERERNLEVQLLEYYGLKEQETAVIELQNRLKINNMEAKLFTLKIESLQVDNRRLESQVS 240
           RERERNLE QLLEYYGLKEQETAV+ELQNRLKINNMEAKLFT KIESL+ DNRRLESQV 
Sbjct: 181 RERERNLEFQLLEYYGLKEQETAVMELQNRLKINNMEAKLFTFKIESLEADNRRLESQVC 240

Query: 241 DHAKSVSDLEAARAKIKFLKKTLRKEAEQNRAQILNLQQRVAKLLDQEYKTNGNNKDAQI 300
           +HAK+VSDLEAARAKIKFLKK LR EAEQNR QILNLQQ+V KL DQE+KTN +NKDAQI
Sbjct: 241 NHAKTVSDLEAARAKIKFLKKKLRHEAEQNRRQILNLQQKVLKLQDQEHKTNESNKDAQI 300

Query: 301 NLQKIEDLEKEMEDLRKSNLRLQTENSDLVGRLDATQSLANSILEDPEKDSLKEERDRLT 360
            LQKIEDLEKE+E+LRK N RLQ ENSDL  RLDATQ LANS+LED EK+SLKEE +RLT
Sbjct: 301 KLQKIEDLEKEIEELRKLNSRLQIENSDLGRRLDATQFLANSLLEDQEKESLKEETERLT 360

Query: 361 LENETLTKEIEQLQANRCADVEELVYIRWVNACLRYELRNFQPPAGKAAARDLSKTASPK 420
            ENE LTKEIEQLQA+R ADVEELVY+RW+NACLRYELRNFQPPAGK AARDLSKT SPK
Sbjct: 361 QENEALTKEIEQLQAHRLADVEELVYLRWINACLRYELRNFQPPAGKTAARDLSKTLSPK 420

Query: 421 SEEKVKKLILEYANTEGIEGKSINIMDFDSDQCSSSQASSHTDPGDQDYLAVDFPSTAKP 480
           SEEK KKLIL+YANTEG EGK I++ DFDSDQ SSSQASSHTDPGD D  A +FPSTAK 
Sbjct: 421 SEEKAKKLILDYANTEGNEGKGISVTDFDSDQWSSSQASSHTDPGDPDDSAAEFPSTAKT 480

Query: 481 SSNKTKFMSKLRKLLRGKGSQQNLAMLAEKSATSVEDSDSPLHSSSNSTGTNAR----QG 540
           SSNK KF+ KL+KLLRGKGSQQNL +LAEKSA S+EDSDSP +SSSNSTGTNA     Q 
Sbjct: 481 SSNKIKFIGKLKKLLRGKGSQQNLTLLAEKSAASIEDSDSPCYSSSNSTGTNATRAEGQA 540

Query: 541 TGYTTPSQYSPRRSMDFQRLNSQKEDNIKTEDSIRRNSDVGYTKKSFVI----------R 600
            GY T S+ S R S+DFQRL+SQKED +KTEDS RRNSDVGY  K FV+          R
Sbjct: 541 IGYATSSRNSSRYSIDFQRLHSQKEDEVKTEDSARRNSDVGYVNKRFVLGSDQSSNSSDR 600

Query: 601 SPSQETECTKKSELMKYAEALKDTRGAKNRSLRKVASINSF 628
           S SQ+TE T+KSELMKYAE LKDTRGAKN+S RK ASI SF
Sbjct: 601 SQSQDTESTEKSELMKYAEVLKDTRGAKNQSHRKAASIGSF 641

[Close]

BLAST of Sed0020325 vs. ExPASy TrEMBL
Match: A0A0A0K799 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G452300 PE=4 SV=1)

HSP 1 Score: 865.5 bits (2235), Expect = 1.3e-247
Identity = 483/641 (75.35%), Postives = 531/641 (82.84%), Query Frame = 0


Query: 1   MEGKGDLMKPILFKFGVALAISFAGLIYSRSKIRKKRPPLPPPSSSSSDDRDNKVDLGRG 60
           ME KG+L +PILFKFGV LAISFAG +YSR +++ KRPPLPPPS SSSDD+ NKV+LGRG
Sbjct: 1   MEDKGNLRRPILFKFGVVLAISFAGFLYSRFRLKNKRPPLPPPSYSSSDDQGNKVNLGRG 60

Query: 61  RGPKLANQAMKEATSASPNVILFATDAYEEMCIPKVNVNNSNVSLSPSYKNIVDKDGLLL 120
           RGP+L  Q          NV+LFA DAYEE CIPKVN ++SN+ L PS K+ VDKDGLL 
Sbjct: 61  RGPRLDKQ------GTPSNVVLFAVDAYEETCIPKVNFDDSNLGLCPSNKHGVDKDGLLP 120

Query: 121 PEFQDLVKEFDLSAANAGVSPNIIVESPRLGLETPKAYKTDEMDEYDQEIRHLKSKVKML 180
           PEFQ+L+KEFDLSAANA  S    VE+PR GLETPKAYKT E DEY+QEIR+LKSKVKML
Sbjct: 121 PEFQELLKEFDLSAANAEFSSKKNVEAPRYGLETPKAYKTVENDEYEQEIRYLKSKVKML 180

Query: 181 RERERNLEVQLLEYYGLKEQETAVIELQNRLKINNMEAKLFTLKIESLQVDNRRLESQVS 240
           RERERNLEVQLLEYYGLKEQETAV+ELQNRLKINNMEAKLFT KIESL+ DNRRLESQV 
Sbjct: 181 RERERNLEVQLLEYYGLKEQETAVMELQNRLKINNMEAKLFTFKIESLEADNRRLESQVC 240

Query: 241 DHAKSVSDLEAARAKIKFLKKTLRKEAEQNRAQILNLQQRVAKLLDQEYKTNGNNKDAQI 300
           DHAKSVSDLEAARAKIKFLKK LR EAEQNR QILNLQ+RV KL DQE+KTN +NKDAQI
Sbjct: 241 DHAKSVSDLEAARAKIKFLKKKLRYEAEQNRGQILNLQKRVLKLQDQEHKTNQSNKDAQI 300

Query: 301 NLQKIEDLEKEMEDLRKSNLRLQTENSDLVGRLDATQSLANSILEDPEKDSLKEERDRLT 360
            LQKIEDLEKE+E+LRKSNLRL+ ENSDL  RLDATQ LANS+LED EK+SLKEE +RLT
Sbjct: 301 KLQKIEDLEKEIEELRKSNLRLEIENSDLGRRLDATQFLANSLLEDQEKESLKEETERLT 360

Query: 361 LENETLTKEIEQLQANRCADVEELVYIRWVNACLRYELRNFQPPAGKAAARDLSKTASPK 420
            ENE LTKEIEQLQA+R ADVEELVY+RW+NACLRYELRNFQPPAGK AARDLSKT SPK
Sbjct: 361 RENEALTKEIEQLQAHRLADVEELVYLRWINACLRYELRNFQPPAGKTAARDLSKTLSPK 420

Query: 421 SEEKVKKLILEYANTEGIEGKSINIMDFDSDQCSSSQASSHTDPGDQDYLAVDFPSTAKP 480
           SEEK KKLIL+YANTEG EGKS+N+ DFDSDQ SSSQASSHTDPGD D    DFPSTAK 
Sbjct: 421 SEEKAKKLILDYANTEGNEGKSMNVTDFDSDQWSSSQASSHTDPGDPDDSTTDFPSTAKT 480

Query: 481 SSNKTKFMSKLRKLLRGKGSQQNLAMLAEKSATSVEDSDSPLHSSSNSTGTNAR----QG 540
            SNK KF+SKLRKLL+GKGSQQN+ +LAEKSA SVEDSDSP +S+SNSTGTNA     Q 
Sbjct: 481 GSNKIKFISKLRKLLKGKGSQQNMTLLAEKSAASVEDSDSPCYSTSNSTGTNATRAEGQA 540

Query: 541 TGYTTPSQYSPRRSMDFQRLNSQKEDNIKTEDSIRRNSDVGYTKKSFVI----------R 600
            GY TP   S   SMDF RL SQKED++K EDSIRRNSDVG   K FV+          R
Sbjct: 541 IGYATPLLNSSGHSMDFHRLQSQKEDDVKIEDSIRRNSDVGCVNKRFVVGSDQLSDSSYR 600

Query: 601 SPSQETECTKKSELMKYAEALKDTRGAKNRSLRKVASINSF 628
           S +Q+TE T+KSELMKYAE LKDTRGAKNRS RK ASI SF
Sbjct: 601 SQNQDTESTEKSELMKYAEVLKDTRGAKNRSHRKTASIGSF 635

[Close]

BLAST of Sed0020325 vs. ExPASy TrEMBL
Match: A0A6J1HMC2 (protein CHUP1, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111464273 PE=4 SV=1)

HSP 1 Score: 835.1 bits (2156), Expect = 1.9e-238
Identity = 475/644 (73.76%), Postives = 526/644 (81.68%), Query Frame = 0


Query: 1   MEGKGDLMKPILFKFGVALAISFAGLIYSRSKIRKKRPPLPPPSSSSSDD-RDNKVDLGR 60
           ME K DL+KP+LFKFGV LAISFA  +YSR +IR KRP L PPSSSSSD+ R+NKV+LGR
Sbjct: 2   MEEKTDLVKPVLFKFGVVLAISFASFMYSRFRIRNKRPSLAPPSSSSSDEWRNNKVELGR 61

Query: 61  GRGPKLANQAMKEATSASPNVILFATDAYEEMCIPKVNVNNSNVSLSPSYKNIVDKDGLL 120
           GRG KL +Q MK AT+AS N I+ A DAYEEMCI K N ++S+   S    +IVD++GLL
Sbjct: 62  GRGHKLDDQTMKVATAASSNAIILAADAYEEMCIQKANGDDSSAGFSTGNDHIVDEEGLL 121

Query: 121 LPEFQDLVKEFDLSAANAGVSPNIIVESPRLGLETPKAYKTDEMDEYDQEIRHLKSKVKM 180
           LPEFQ+LVK+FDLSAANAG SP     + RLG+ETPKAYK  E D Y+ EI+HLKSKVKM
Sbjct: 122 LPEFQELVKQFDLSAANAGFSPKKNAGALRLGIETPKAYKRVESDGYEHEIKHLKSKVKM 181

Query: 181 LRERERNLEVQLLEYYGLKEQETAVIELQNRLKINNMEAKLFTLKIESLQVDNRRLESQV 240
           LRERERNLEVQLLEYYGLKEQETAV+ELQNRLKINNMEAKLFTLKIESLQ DNRRLESQV
Sbjct: 182 LRERERNLEVQLLEYYGLKEQETAVMELQNRLKINNMEAKLFTLKIESLQADNRRLESQV 241

Query: 241 SDHAKSVSDLEAARAKIKFLKKTLRKEAEQNRAQILNLQQRVAKLLDQEYKTNGNNKDAQ 300
           SD AKS SDLEAAR  IKFLKK LR EAEQNR QI+NLQQRV KLLDQE K N + K+ Q
Sbjct: 242 SDQAKSASDLEAARTTIKFLKKKLRHEAEQNREQIVNLQQRVTKLLDQECKINESTKNDQ 301

Query: 301 INLQKIEDLEKEMEDLRKSNLRLQTENSDLVGRLDATQSLANSILEDPEKDSLKEERDRL 360
           I LQ IEDLEKE+E+L+K+N RLQ ENSDL  RLDATQ LANSILED EK+SLKEERDR 
Sbjct: 302 IKLQNIEDLEKEIEELKKANSRLQKENSDLGRRLDATQFLANSILEDQEKESLKEERDRF 361

Query: 361 TLENETLTKEIEQLQANRCADVEELVYIRWVNACLRYELRNFQPPAGKAAARDLSKTASP 420
             ENETLTKEIEQLQA+RCADVEELVY+RW+NACLRYELRNFQP AGK AARDLSKT SP
Sbjct: 362 AQENETLTKEIEQLQAHRCADVEELVYLRWINACLRYELRNFQPAAGKTAARDLSKTLSP 421

Query: 421 KSEEKVKKLILEYANTEGIEGKSINIMDFDSDQCSSSQASSHTDPGDQDYLAVDFPSTAK 480
           KSE K KKLILEYANTEGIEGKSIN+ DFDSDQ SSSQASSHTDPGD DY AVD   TAK
Sbjct: 422 KSEHKAKKLILEYANTEGIEGKSINLTDFDSDQWSSSQASSHTDPGDLDYSAVDSRLTAK 481

Query: 481 PSSNKTKFMSKLRKLLRGKGSQQNLAMLAEKSATSVEDSDSPLHSSSNSTGTNARQ---- 540
           PSSNK KFMSKLR LLRGK +QQ+ A+L EKSA +V D DSP +SSS+STGTNA +    
Sbjct: 482 PSSNKIKFMSKLRSLLRGKSNQQSSALLPEKSAAAVGDVDSPRYSSSHSTGTNATRADGH 541

Query: 541 GTGYTTPSQYSPRRSMDFQRLNSQKEDNIKTEDSIRRNSDVGYTKKSFV----------I 600
           GTGYTTPSQ S RRSMDF RLNSQKED++KTEDS+RRNSDVGY  K FV           
Sbjct: 542 GTGYTTPSQNSSRRSMDFHRLNSQKEDDVKTEDSLRRNSDVGYINKRFVSGSDRSSNSLY 601

Query: 601 RSPSQETECT---KKSELMKYAEALKDTRGAKNRSLRKVASINS 627
           RS SQETE T   +KSEL+KYAE LK++RG KN+S RKVA + S
Sbjct: 602 RSSSQETESTDKSEKSELLKYAEVLKNSRGDKNQSRRKVAPMCS 645

[Close]

BLAST of Sed0020325 vs. ExPASy TrEMBL
Match: A0A6J1KFL7 (protein CHUP1, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111494600 PE=4 SV=1)

HSP 1 Score: 818.1 bits (2112), Expect = 2.4e-233
Identity = 470/648 (72.53%), Postives = 520/648 (80.25%), Query Frame = 0


Query: 1   MEGKGDLMKPILFKFGVALAISFAGLIYSRSKIRKKRPPLPPPSSSSSDD-RDNKVDLGR 60
           ME K DL+KP+LFKFGV LAISFA  +YSR +IR KRP L PPSSSSSD+  +NKV+LG 
Sbjct: 2   MEEKTDLVKPVLFKFGVVLAISFASFMYSRFRIRNKRPSLAPPSSSSSDEWGNNKVELGT 61

Query: 61  GRGPKLANQAMKEATSASPNVILFATDAYEEMCIPKVNVNNSNVS-LSPSYKNIVDKDGL 120
           GRG KL +Q MK AT+AS N I+ A DAYEEMCI K N ++SN +  S    +IVDK+G+
Sbjct: 62  GRGHKLDDQTMKVATAASSNAIILAADAYEEMCIQKANGDDSNAAGFSTGNDHIVDKEGM 121

Query: 121 LLPEFQDLVKEFDLSAANAGVSPNIIVESPRLGLETPKAYKTDEMDEYDQEIRHLKSKVK 180
           LLPEFQ+LVK+FDLSAANAG SP       R G+ETPKAYK  E D Y+ EI+HLKSKVK
Sbjct: 122 LLPEFQELVKQFDLSAANAGFSPKKNAGELRSGIETPKAYKRVETDGYEHEIKHLKSKVK 181

Query: 181 MLRERERNLEVQLLEYYGLKEQETAVIELQNRLKINNMEAKLFTLKIESLQVDNRRLESQ 240
           MLRERERNLEVQLLEYYGLKEQETAV+ELQNRLKINNMEAKLFTLKIESLQ DNRRLESQ
Sbjct: 182 MLRERERNLEVQLLEYYGLKEQETAVMELQNRLKINNMEAKLFTLKIESLQADNRRLESQ 241

Query: 241 VSDHAKSVSDLEAARAKIKFLKKTLRKEAEQNRAQILNLQQRVAKLLDQEYKTNGNNKDA 300
           VSD AKS SDLEAAR  IKFLKK LR EAEQNR QI+NLQQRV KLLDQEYK N + K+ 
Sbjct: 242 VSDQAKSASDLEAARTTIKFLKKKLRHEAEQNREQIVNLQQRVTKLLDQEYKINESTKND 301

Query: 301 QINLQKIEDLEKEMEDLRKSNLRLQTENSDLVGRLDATQSLANSILEDPEKDSLKEERDR 360
           QI LQ IEDLEKE+E+L+K N RLQ ENSDL  RLDATQ LANSILED EK+SLKEERD 
Sbjct: 302 QIKLQNIEDLEKEIEELKKVNSRLQKENSDLGRRLDATQFLANSILEDQEKESLKEERDC 361

Query: 361 LTLENETLTKEIEQLQANRCADVEELVYIRWVNACLRYELRNFQPPAGKAAARDLSKTAS 420
              EN+TLTKEIEQLQA+RCADVEELVY+RW+NACLRYELRNFQP AGK AARDLSKT S
Sbjct: 362 FAQENKTLTKEIEQLQAHRCADVEELVYLRWINACLRYELRNFQPAAGKTAARDLSKTLS 421

Query: 421 PKSEEKVKKLILEYANTEGIEGKSINIMDFDSDQCSSSQASSHTDPGDQDYLAVDFPSTA 480
           PKSE K KKLILEYANTEGIEGKSIN+ DFDSDQ SSSQASSHTDPGD DY AVD   TA
Sbjct: 422 PKSEHKAKKLILEYANTEGIEGKSINLTDFDSDQWSSSQASSHTDPGDLDYSAVDSRLTA 481

Query: 481 KPSSNKTKFMSKLRKLLRGKGSQQNLAMLAEKSATSVEDSDSPLHSSSNSTGTNARQG-- 540
           KPSSNK KFMSKLR LLRGK +QQ+ A+LAEKSA +V D DSP +SSS+STGTN  +   
Sbjct: 482 KPSSNKIKFMSKLRSLLRGKSNQQSSALLAEKSAAAVGDVDSPRYSSSHSTGTNTTRADG 541

Query: 541 --TGYTTPSQYSPRRSMDFQRLNSQKEDNIKTEDSIRRNSDVGYTKKSFV---------- 600
             TGYTTPSQ S RRSMDF RLNSQKED++KTEDS+RRNS+VGY  K FV          
Sbjct: 542 HCTGYTTPSQNSSRRSMDFHRLNSQKEDDVKTEDSLRRNSNVGYINKRFVSGSDRSSNSL 601

Query: 601 IRSPSQETECT------KKSELMKYAEALKDTRGAKNRSLRKVASINS 627
            RS SQETE T      +KSEL+KYAE LK+TRG KN+  RKVA + S
Sbjct: 602 YRSSSQETESTDKSNKSEKSELLKYAEVLKNTRGDKNQPRRKVAPMCS 649

[Close]

BLAST of Sed0020325 vs. TAIR 10
Match: AT1G52080.1 (actin binding protein family )

HSP 1 Score: 314.3 bits (804), Expect = 2.2e-85
Identity = 233/624 (37.34%), Postives = 355/624 (56.89%), Query Frame = 0


Query: 11  ILFKFGVALAISFAGLIYSRSKIRKKR-----PPLPPPSSSSS-DDRDNKVDLGRGRGPK 70
           ++ + G ALA+SFAG +++R +   KR     PPLPP SS +   D  NK    R  G +
Sbjct: 13  LVLQLGAALAVSFAGFLFARFRKNTKRIGPTLPPLPPHSSDNGYRDYSNKSIDRRDEGTE 72

Query: 71  LANQAMKEATSASPNVILFATDAYEEMCIPKVNVNNSNVSLSPSYK-NIVDKDGLLLPEF 130
             ++                                + + +SP  + ++ +KD  LLPEF
Sbjct: 73  KTDE-------------------------------ETLIGVSPRRECDLDEKDVFLLPEF 132

Query: 131 QDLVKEFDLSAANAGVSPNIIVESPRLGLETPKAYKTDEMDEYDQEIRHLKSKVKMLRER 190
           ++  K+ DL   +         E+PR  +  P A+ ++E  +++ EI  L++ V+ LRER
Sbjct: 133 EEEAKKLDLLVCDD-------CETPRSDITAPLAFPSEEEADHENEINRLRNTVRALRER 192

Query: 191 ERNLEVQLLEYYGLKEQETAVIELQNRLKINNMEAKLFTLKIESLQVDNRRLESQVSDHA 250
           ER LE +LLEYY LKEQ+   +EL++RLK+N ME K+F  KI+ LQ +N +L+++  +H+
Sbjct: 193 ERCLEDKLLEYYSLKEQQKIAMELRSRLKLNQMETKVFNFKIKKLQAENEKLKAECFEHS 252

Query: 251 KSVSDLEAARAKIKFLKKTLRKEAEQNRAQILNLQQRVAKLLDQEYKTNGNNKDAQINLQ 310
           K + +L+ A+++++ LKK L    +Q+ AQIL+L+QRVA+L ++E K    + +A   +Q
Sbjct: 253 KVLLELDMAKSQVQVLKKKLNINTQQHVAQILSLKQRVARLQEEEIKAVLPDLEADKMMQ 312

Query: 311 KIEDLEKEMEDLRKSNLRLQTENSDLVGRLDATQSLANSILEDPEK-DSLKEERDRLTLE 370
           ++ DLE E+ +L  +N RLQ EN +L  +L++ Q +ANS LE+PE+ ++L+E+ +RL  E
Sbjct: 313 RLRDLESEINELTDTNTRLQFENFELSEKLESVQIIANSKLEEPEEIETLREDCNRLRSE 372

Query: 371 NETLTKEIEQLQANRCADVEELVYIRWVNACLRYELRNFQPPAGKAAARDLSKTASPKSE 430
           NE L K++EQLQ +RC D+E+LVY+RW+NACLRYELR +QPPAGK  ARDLS T SP SE
Sbjct: 373 NEELKKDVEQLQGDRCTDLEQLVYLRWINACLRYELRTYQPPAGKTVARDLSTTLSPTSE 432

Query: 431 EKVKKLILEYANTEGIEGKSINIMDFDSDQCSSSQASSHTDPGDQDYLAVD-FPSTAKPS 490
           EK K+LILEYA++E       +  D+D    S  ++S  TD    D  +VD   +T    
Sbjct: 433 EKAKQLILEYAHSE-------DNTDYDRWSSSQEESSMITDSMFLDDSSVDTLFATKTKK 492

Query: 491 SNKTKFMSKLRKLLRGKGSQQNLAMLAEKSATSVEDSDSPLHSSSNSTGTNARQGTGYTT 550
           + K K M KL K+L GK ++      ++K A S E        SS++TG        ++T
Sbjct: 493 TGKKKLMHKLMKILHGKDTKD-----SKKRAGSSE-------PSSSNTGV-------HST 552

Query: 551 PSQYSPRRSMDFQRLNSQKEDNIKTEDSI---RRNSDVGYTKKSFVIRSPSQETECTKKS 610
           P Q     SMDFQ L   K++    ++ I   RR S+      S        ET+   K 
Sbjct: 553 PRQLRSTHSMDFQMLMRGKDEEEDFKNHIVMLRRKSEA--AGSSTYGEEHCLETDQNGKK 570

Query: 611 ELMKYAEALKDTRGAKNRSLRKVA 623
           EL+K A+AL  +R  K    + V+
Sbjct: 613 ELIKLADALTKSRSTKKLHKKSVS 570

[Close]

BLAST of Sed0020325 vs. TAIR 10
Match: AT3G25690.1 (Hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 216.5 bits (550), Expect = 6.2e-56
Identity = 173/520 (33.27%), Postives = 276/520 (53.08%), Query Frame = 0


Query: 14  KFGVALAISFAGLIYSRSKIRKKRPPLPPPSSSSSDDRDNKVDLGRGRGPKLANQAMKEA 73
           + G  +A S A +   R  ++  +P   P  +    D++  VD       K   +  +E 
Sbjct: 4   RIGFVVAASIAAVTVKRLNVKPSKPS-KPSDNGEGGDKEQSVDPDYNLNDKNLQEEEEEE 63

Query: 74  TSASPNVILFATDAYEEMCIPKVNVNNSNVSLSPSYKNIVDKDGLLLPEFQDLVK---EF 133
                          EE+ +    +N +      S+ + +D D  +LPEF+DL+    E+
Sbjct: 64  E--------------EEVKLINSVINQTR----GSFSDYLDDD--ILPEFEDLLSGEIEY 123

Query: 134 DLSAANAGVSPNIIVESPRLGLETPKAYKTDEMDEYDQEIRHLKSKVKMLRERERNLEVQ 193
            L   +  +             E  + Y+  EM   D E+  LK  VK L ERE  LE +
Sbjct: 124 PLPDDDNNLEK----------AEKERKYEV-EMAYNDGELERLKQLVKELEEREVKLEGE 183

Query: 194 LLEYYGLKEQETAVIELQNRLKINNMEAKLFTLKIESLQVDNRRLESQVSDHAKSVSDLE 253
           LLEYYGLKEQE+ ++ELQ +LKI  +E  +  + I SLQ + ++L+ ++S +     +LE
Sbjct: 184 LLEYYGLKEQESDIVELQRQLKIKTVEIDMLNITINSLQAERKKLQEELSQNGIVRKELE 243

Query: 254 AARAKIKFLKKTLRKEAEQNRAQILNLQQRVAKLLDQEYKTNGNNKDAQINLQKIEDLEK 313
            AR KIK L++ ++ +A Q + Q+L L+Q V+ L  +E +    + + +  L+ ++DLE 
Sbjct: 244 VARNKIKELQRQIQLDANQTKGQLLLLKQHVSSLQMKEEEAMNKDTEVERKLKAVQDLEV 303

Query: 314 EMEDLRKSNLRLQTENSDLVGRLDATQSLANSILEDPEKD---SLKEERDRLTLENETLT 373
           ++ +L++ N  LQ E  +L  +LD+ ++   ++    E D    ++EE + L   NE L 
Sbjct: 304 QVMELKRKNRELQHEKRELSIKLDSAEARIATLSNMTESDKVAKVREEVNNLKHNNEDLL 363

Query: 374 KEIEQLQANRCADVEELVYIRWVNACLRYELRNFQPPAGKAAARDLSKTASPKSEEKVKK 433
           K++E LQ NR ++VEELVY+RWVNACLRYELRN+Q PAGK +ARDLSK  SPKS+ K K+
Sbjct: 364 KQVEGLQMNRFSEVEELVYLRWVNACLRYELRNYQTPAGKISARDLSKNLSPKSQAKAKR 423

Query: 434 LILEYANTEGIEGKSINIMDFDSDQCSSSQASSHTDPGDQDYLAVDFPSTAKPSSNKTKF 493
           L+LEYA +E  +G +    D +S+    SQ SS   PG  D+      S+    S+ +K 
Sbjct: 424 LMLEYAGSERGQGDT----DLESNY---SQPSS---PGSDDFDNASMDSSTSRFSSFSKK 481

Query: 494 MSKLRKLLRGKGSQQNLAMLAEKSATSVEDSDSPLHSSSN 528
              ++KL +   S+ + ++ +  S +    S   L SS N
Sbjct: 484 PGLIQKLKKWGKSKDDSSVQSSPSRSFYGGSPGRLSSSMN 481

[Close]

BLAST of Sed0020325 vs. TAIR 10
Match: AT3G25690.2 (Hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 216.5 bits (550), Expect = 6.2e-56
Identity = 173/520 (33.27%), Postives = 276/520 (53.08%), Query Frame = 0


Query: 14  KFGVALAISFAGLIYSRSKIRKKRPPLPPPSSSSSDDRDNKVDLGRGRGPKLANQAMKEA 73
           + G  +A S A +   R  ++  +P   P  +    D++  VD       K   +  +E 
Sbjct: 4   RIGFVVAASIAAVTVKRLNVKPSKPS-KPSDNGEGGDKEQSVDPDYNLNDKNLQEEEEEE 63

Query: 74  TSASPNVILFATDAYEEMCIPKVNVNNSNVSLSPSYKNIVDKDGLLLPEFQDLVK---EF 133
                          EE+ +    +N +      S+ + +D D  +LPEF+DL+    E+
Sbjct: 64  E--------------EEVKLINSVINQTR----GSFSDYLDDD--ILPEFEDLLSGEIEY 123

Query: 134 DLSAANAGVSPNIIVESPRLGLETPKAYKTDEMDEYDQEIRHLKSKVKMLRERERNLEVQ 193
            L   +  +             E  + Y+  EM   D E+  LK  VK L ERE  LE +
Sbjct: 124 PLPDDDNNLEK----------AEKERKYEV-EMAYNDGELERLKQLVKELEEREVKLEGE 183

Query: 194 LLEYYGLKEQETAVIELQNRLKINNMEAKLFTLKIESLQVDNRRLESQVSDHAKSVSDLE 253
           LLEYYGLKEQE+ ++ELQ +LKI  +E  +  + I SLQ + ++L+ ++S +     +LE
Sbjct: 184 LLEYYGLKEQESDIVELQRQLKIKTVEIDMLNITINSLQAERKKLQEELSQNGIVRKELE 243

Query: 254 AARAKIKFLKKTLRKEAEQNRAQILNLQQRVAKLLDQEYKTNGNNKDAQINLQKIEDLEK 313
            AR KIK L++ ++ +A Q + Q+L L+Q V+ L  +E +    + + +  L+ ++DLE 
Sbjct: 244 VARNKIKELQRQIQLDANQTKGQLLLLKQHVSSLQMKEEEAMNKDTEVERKLKAVQDLEV 303

Query: 314 EMEDLRKSNLRLQTENSDLVGRLDATQSLANSILEDPEKD---SLKEERDRLTLENETLT 373
           ++ +L++ N  LQ E  +L  +LD+ ++   ++    E D    ++EE + L   NE L 
Sbjct: 304 QVMELKRKNRELQHEKRELSIKLDSAEARIATLSNMTESDKVAKVREEVNNLKHNNEDLL 363

Query: 374 KEIEQLQANRCADVEELVYIRWVNACLRYELRNFQPPAGKAAARDLSKTASPKSEEKVKK 433
           K++E LQ NR ++VEELVY+RWVNACLRYELRN+Q PAGK +ARDLSK  SPKS+ K K+
Sbjct: 364 KQVEGLQMNRFSEVEELVYLRWVNACLRYELRNYQTPAGKISARDLSKNLSPKSQAKAKR 423

Query: 434 LILEYANTEGIEGKSINIMDFDSDQCSSSQASSHTDPGDQDYLAVDFPSTAKPSSNKTKF 493
           L+LEYA +E  +G +    D +S+    SQ SS   PG  D+      S+    S+ +K 
Sbjct: 424 LMLEYAGSERGQGDT----DLESNY---SQPSS---PGSDDFDNASMDSSTSRFSSFSKK 481

Query: 494 MSKLRKLLRGKGSQQNLAMLAEKSATSVEDSDSPLHSSSN 528
              ++KL +   S+ + ++ +  S +    S   L SS N
Sbjct: 484 PGLIQKLKKWGKSKDDSSVQSSPSRSFYGGSPGRLSSSMN 481

[Close]

BLAST of Sed0020325 vs. TAIR 10
Match: AT3G25690.3 (Hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 152.5 bits (384), Expect = 1.1e-36
Identity = 109/301 (36.21%), Postives = 178/301 (59.14%), Query Frame = 0


Query: 230 VDNRRLESQVSDHAKSVSDLEAARAKIKFLKKTLRKEAEQNRAQILNLQQRVAKLLDQEY 289
           ++++ L+ ++S +     +LE AR KIK L++ ++ +A Q + Q+L L+Q V+ L  +E 
Sbjct: 50  LNDKNLQEELSQNGIVRKELEVARNKIKELQRQIQLDANQTKGQLLLLKQHVSSLQMKEE 109

Query: 290 KTNGNNKDAQINLQKIEDLEKEMEDLRKSNLRLQTENSDLVGRLDATQSLANSILEDPEK 349
           +    + + +  L+ ++DLE ++ +L++ N  LQ E  +L  +LD+ ++   ++    E 
Sbjct: 110 EAMNKDTEVERKLKAVQDLEVQVMELKRKNRELQHEKRELSIKLDSAEARIATLSNMTES 169

Query: 350 D---SLKEERDRLTLENETLTKEIEQLQANRCADVEELVYIRWVNACLRYELRNFQPPAG 409
           D    ++EE + L   NE L K++E LQ NR ++VEELVY+RWVNACLRYELRN+Q PAG
Sbjct: 170 DKVAKVREEVNNLKHNNEDLLKQVEGLQMNRFSEVEELVYLRWVNACLRYELRNYQTPAG 229

Query: 410 KAAARDLSKTASPKSEEKVKKLILEYANTEGIEGKSINIMDFDSDQCSSSQASSHTDPGD 469
           K +ARDLSK  SPKS+ K K+L+LEYA +E  +G +    D +S+    SQ SS   PG 
Sbjct: 230 KISARDLSKNLSPKSQAKAKRLMLEYAGSERGQGDT----DLESNY---SQPSS---PGS 289

Query: 470 QDYLAVDFPSTAKPSSNKTKFMSKLRKLLRGKGSQQNLAMLAEKSATSVEDSDSPLHSSS 528
            D+      S+    S+ +K    ++KL +   S+ + ++ +  S +    S   L SS 
Sbjct: 290 DDFDNASMDSSTSRFSSFSKKPGLIQKLKKWGKSKDDSSVQSSPSRSFYGGSPGRLSSSM 340

[Close]

BLAST of Sed0020325 vs. TAIR 10
Match: AT2G36650.1 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 55.8 bits (133), Expect = 1.4e-07
Identity = 64/296 (21.62%), Postives = 146/296 (49.32%), Query Frame = 0


Query: 112 IVDKDGLLLPEFQDLVKEFDLSAANAGVSPNIIVESPRLGLETPKAYKTDEMDEYDQEIR 171
           ++   GL+L  F    ++ +++++ +    +    SP    E  +  + +  ++  QEI 
Sbjct: 25  VLSATGLILARFVSRNEDNEVTSSTSNPESS---SSP--SRENDEEEEAESPNQQKQEIL 84

Query: 172 HLKSKVKMLRERERNLEVQLLEYYGLKEQETAVIELQNRLKINNMEAKLFTLKIESLQVD 231
            LKS+ + L+ +E  +E+    +  LK+QE  +IE ++ L +   +   F  ++ +++ +
Sbjct: 85  SLKSRFEELQRKEYEMELHFERFCNLKDQEVMLIEHKSILSLEKAQLDFFRKEVLAMEEE 144

Query: 232 NRRLESQVSDHAKSVSDLEAARAKIKFLK---KTLRKEAEQ------NRAQILNLQQRVA 291
           ++R ++ V  + K V +++  R++   L+   K LR++++Q         +I+ +++   
Sbjct: 145 HKRGQALVIVYLKLVGEIQELRSENGLLEGKAKKLRRKSKQLYRVVNESRKIIGVEKEFL 204

Query: 292 KLLDQEYKTNGNNKDAQINLQKIEDLEKEMEDLRKSNLRLQTENSDLVGRLDATQSLANS 351
           K +D E +T  N          +++LE +++D+      LQ E  +L  +   + S    
Sbjct: 205 KCVD-ELETKNN---------IVKELEGKVKDMEAYVDVLQEEKEELFMKSSNSTS---- 264

Query: 352 ILEDPEKDSLKEERDRLTLENETLTKEIEQLQANRCADVEELVYIRWVNACLRYEL 399
                E  S+++ R         + +E E+L+ +    V+E++ +RW NACLR+E+
Sbjct: 265 -----EMVSVEDYR--------RIVEEYEELKKDYANGVKEVINLRWSNACLRHEV 288

The following BLAST results are available for this feature:

BLAST of Sed0020325 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898688.1	1.3e-257	78.19	protein CHUP1, chloroplastic [Benincasa hispida] >XP_038898689.1 protein CHUP1, ...	[more]
KAA0059471.1	1.0e-254	76.76	protein CHUP1 [Cucumis melo var. makuwa] >TYK03852.1 protein CHUP1 [Cucumis melo...	[more]
XP_008462405.1	1.2e-253	76.60	PREDICTED: protein CHUP1, chloroplastic [Cucumis melo] >XP_008462406.1 PREDICTED...	[more]
XP_004141788.1	2.7e-247	75.35	protein CHUP1, chloroplastic isoform X2 [Cucumis sativus] >KGN45575.1 hypothetic...	[more]
XP_031744947.1	3.0e-246	75.23	protein CHUP1, chloroplastic isoform X1 [Cucumis sativus] >XP_031744948.1 protei...	[more]

BLAST of Sed0020325 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LI74	8.8e-55	33.27	Protein CHUP1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CHUP1 PE=1 SV=1	[more]
Q3V6T2	2.4e-04	27.51	Girdin OS=Homo sapiens OX=9606 GN=CCDC88A PE=1 SV=2	[more]
Q5SNZ0	5.4e-04	26.64	Girdin OS=Mus musculus OX=10090 GN=Ccdc88a PE=1 SV=2	[more]

BLAST of Sed0020325 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V182	5.0e-255	76.76	Protein CHUP1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00460 ...	[more]
A0A1S3CGW9	5.6e-254	76.60	protein CHUP1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103500772 PE=4 SV=1	[more]
A0A0A0K799	1.3e-247	75.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G452300 PE=4 SV=1	[more]
A0A6J1HMC2	1.9e-238	73.76	protein CHUP1, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1KFL7	2.4e-233	72.53	protein CHUP1, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111494...	[more]

BLAST of Sed0020325 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52080.1	2.2e-85	37.34	actin binding protein family	[more]
AT3G25690.1	6.2e-56	33.27	Hydroxyproline-rich glycoprotein family protein	[more]
AT3G25690.2	6.2e-56	33.27	Hydroxyproline-rich glycoprotein family protein	[more]
AT3G25690.3	1.1e-36	36.21	Hydroxyproline-rich glycoprotein family protein	[more]
AT2G36650.1	1.4e-07	21.62	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 205..235
None	No IPR available	COILS	Coil	Coil	coord: 259..286
None	No IPR available	COILS	Coil	Coil	coord: 107..197
None	No IPR available	COILS	Coil	Coil	coord: 73..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 419..459
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 359..374
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 359..395
None	No IPR available	PANTHER	PTHR31342:SF4	ACTIN BINDING PROTEIN FAMILY	coord: 2..533
IPR040265	Protein CHUP1-like	PANTHER	PTHR31342	PROTEIN CHUP1, CHLOROPLASTIC	coord: 2..533

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0020325.1	Sed0020325.1	mRNA
Sed0020325.2	Sed0020325.2	mRNA
Sed0020325.3	Sed0020325.3	mRNA
Sed0020325.4	Sed0020325.4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
cellular_component	GO:0009707	chloroplast outer membrane
cellular_component	GO:0016021	integral component of membrane