Sed0020258 (gene) Chayote v1

Overview


Name	Sed0020258
Type	gene
Organism	Sechium edule (Chayote v1)
Description	B box-type domain-containing protein
Location	LG11: 30479043 .. 30481683 (+)
RNA-Seq Expression	Sed0020258
Synteny	Sed0020258

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGTTTTCACTCTGCAGCCGCATAAACAGCCTCTTTATGGCATATTCATTTTTCTTTTCTCTCTGATTTTCCCTTCTTCTTTTCCCTTTTTCCCAATATATTTGAAGAAATTTCAGAGAAATTTGCTGTTTTTGATCGGTTTTTCATCGACCCAGAAGTGGGAATTGCTTCAAATTTCATTTGGATATGGTGAGAGCTGAAGTTTCCTCTGTATTTTGATGTTTTTGGTGTGTTTTTTTTAGGTTTCTTATTAATTTCTTGTTTGTTTTGTTTAATCATGTGATTTTATCCACACCCAGATTTTTTTTCTTCTGTTTTCATCATGGAATGTTGTGTTTTAGTGTTGTTGGATCACTTTGTTTGAGTTTTTTTTTACTATTACAGTTTGCTGATTGTGGAGAGCATAGCTTGTAAATTTTTTTGTCTTTTAGATGCTTGGTTTATCATATTATTAACAAATTCCTGAGTTTAGTTGGTTTTGGTCAGAAACAATTTGGCTAGATCATACATGATGAATTTGTAAATCTTATGAATTCTACATAATTTCCTTTTCACTTTTTGGTGATTTCCAATTTGGTATTGTTTGGTTCATGTTGGGGTTCTCTTATCATTTAGGAGACCAGTTTCATTTTATTCTAATGTTGTTTTTCTCAAATTTCATAAGTGATGAGCAGTGAATTGAATTGTTTGGAAATGTAATTTTGCAGGCAGGATGCAAGATTTATCTGAAGAAAAGGAAAACAGATTGGCTCAATTGCCTTTTGCAAAGCAAATTCTTTGGTTCTTGTGTTCATCATCAAAACAATACAAAGAATGAAAAGAATGTGTTTTGCATAGACTGTGGGATTGCCATCTGTAGGCATTGCTTGATATCTCATTGCATACATCGGCGTCTGCAGATCTGCAAATACGTTTATCAGTACGTCGTTCGTGTGCCAGACTTGCAGAAGTACCTTGATTGTTGCAACATTCAGGTATTCCTCTATTGCTTCCTTAAATTATACAAATTTGTTGTTCTAAAGTCGCCTTGCTTGTTTTCTGTTGCTTCTGGTTGTAAGTTGGAATCAAATGAAACAAGAAGCTATTTAACCATTTATTAGTCACCATAGTTTTATCTATCATTCATAACGTCATATCAAATTGCTCGAGTCTGTTATCGTAAACGAACAACTTCTAGTGAAGCGACCTCGTGGAAGCATTGAATTGAATCATAAAAGAGAACCATTCTGTTTTTGGAACATTAGAATTCTTGTTCTTCAATGATCAAGTGTTTTCGTGATGCATAAGTACAAGGATGATGCTACTTGGATGGCTAGATTTCAACTGTTGTATAATAACAAATATTAGCTCGTTCTATATGATTTCACGTGCGACAATGAGATAACAGTGATTCGACTTGCTCGATGAACATATAGCTTCTTATGTCATCCTGCCTTTTATGTTGATTATGGTAAAGTTAGGGACTGAAGTACTTGATGAATGTTTGATTTTACCAGACTTATAAGATAAATGGGGAGAAGGCTGTTCATTTGAGTCCTCGTCCGCAATCCAAAGATTCGAAACCGTCAACAAAACTGAAGTTTGGAGGTACTTGTGAAGCTTGTGGGAGATTCATACAAGACCTGCCTAACCGCTTCTGCTCAATCGCTTGCAAAGTAAATAAAACTCATTGTTTCTTTAACTTGTAGTTTCTCTCATTCACTCTCACATACATGACTTGAACCTCTGCCATTGCTAAACTTTTTCAGGTGTCTATGGTTCCAATGGAACTAAACAATCAAAACAGTAAATGCATCGCTTCTGAAGCGAATCTCAATGACATTCCATGGAAGGAAAATCAAAACCTCGAAACCAATATGAGTGAAATGGAATCGTCTATCTCAATGGCTGAATCAACTGAAGAGATCAAAGCATGGCGAGTAAACTCGATCTTGAATCCGAAGAAGCTTTTACATAAAAGGAAGGGCATTCCGCATCGATCGCCTCTAAAGTAATACCTAAACACAAATCATGATACAATCTTTTATATACCCTTTTCCCCTAAACAAACCCACATTTTTTCAAATATCAAATGCCTATAAGCATAAAAGTATAGATATATTAAAAAAAAAAACATATATTTCTCCTCTTGCATTGGTTCCATAGTTGTGTGTTATCCTCATTCTTTCTGCTAATTGTTTTCAAGGTTGTATAGAGAAGGATTGAGTTGCTTGTGGAAACAATAATAATATATAATCAAACCTTTTGGCTTATTCTTTTCCTTTATCTCAATATTATGTGCTGTCTTGTTTCTTTGAGCATGCTGTTGAAGACATTATGATTGATTTTGGCTCTCAACTTTATTTCTTGAGAATGTTTCTTTTCATGTTCCATAAAAGCTTTATCTTTCCATTTTTTTTCCTCTGTTTCCTTATTGGGCCGACATTTTCTCACTCTGGCCCAAATATGTGGTGGTTGTTATTGGGGGCCCATTATGTTCAACTTTACATATTGGCAAGAATCTTTTATTTTTGTCCTCATAAGAATGTGGCAGACAATAGGGTGGCTGCTGTGTGTAAGACTTTCAGATTTCCACATTTGGTCAATAAAATACAGCACACTGAAACTACAAAACAGAATCAAAGTCTTGGTCAGTTTAGTC

mRNA sequence

CAGTTTTCACTCTGCAGCCGCATAAACAGCCTCTTTATGGCATATTCATTTTTCTTTTCTCTCTGATTTTCCCTTCTTCTTTTCCCTTTTTCCCAATATATTTGAAGAAATTTCAGAGAAATTTGCTGTTTTTGATCGGTTTTTCATCGACCCAGAAGTGGGAATTGCTTCAAATTTCATTTGGATATGGCAGGATGCAAGATTTATCTGAAGAAAAGGAAAACAGATTGGCTCAATTGCCTTTTGCAAAGCAAATTCTTTGGTTCTTGTGTTCATCATCAAAACAATACAAAGAATGAAAAGAATGTGTTTTGCATAGACTGTGGGATTGCCATCTGTAGGCATTGCTTGATATCTCATTGCATACATCGGCGTCTGCAGATCTGCAAATACGTTTATCAGTACGTCGTTCGTGTGCCAGACTTGCAGAAGTACCTTGATTGTTGCAACATTCAGACTTATAAGATAAATGGGGAGAAGGCTGTTCATTTGAGTCCTCGTCCGCAATCCAAAGATTCGAAACCGTCAACAAAACTGAAGTTTGGAGGTACTTGTGAAGCTTGTGGGAGATTCATACAAGACCTGCCTAACCGCTTCTGCTCAATCGCTTGCAAAGTGTCTATGGTTCCAATGGAACTAAACAATCAAAACAGTAAATGCATCGCTTCTGAAGCGAATCTCAATGACATTCCATGGAAGGAAAATCAAAACCTCGAAACCAATATGAGTGAAATGGAATCGTCTATCTCAATGGCTGAATCAACTGAAGAGATCAAAGCATGGCGAGTAAACTCGATCTTGAATCCGAAGAAGCTTTTACATAAAAGGAAGGGCATTCCGCATCGATCGCCTCTAAAGTAATACCTAAACACAAATCATGATACAATCTTTTATATACCCTTTTCCCCTAAACAAACCCACATTTTTTCAAATATCAAATGCCTATAAGCATAAAAGTATAGATATATTAAAAAAAAAAACATATATTTCTCCTCTTGCATTGGTTCCATAGTTGTGTGTTATCCTCATTCTTTCTGCTAATTGTTTTCAAGGTTGTATAGAGAAGGATTGAGTTGCTTGTGGAAACAATAATAATATATAATCAAACCTTTTGGCTTATTCTTTTCCTTTATCTCAATATTATGTGCTGTCTTGTTTCTTTGAGCATGCTGTTGAAGACATTATGATTGATTTTGGCTCTCAACTTTATTTCTTGAGAATGTTTCTTTTCATGTTCCATAAAAGCTTTATCTTTCCATTTTTTTTCCTCTGTTTCCTTATTGGGCCGACATTTTCTCACTCTGGCCCAAATATGTGGTGGTTGTTATTGGGGGCCCATTATGTTCAACTTTACATATTGGCAAGAATCTTTTATTTTTGTCCTCATAAGAATGTGGCAGACAATAGGGTGGCTGCTGTGTGTAAGACTTTCAGATTTCCACATTTGGTCAATAAAATACAGCACACTGAAACTACAAAACAGAATCAAAGTCTTGGTCAGTTTAGTC

Coding sequence (CDS)

ATGGCAGGATGCAAGATTTATCTGAAGAAAAGGAAAACAGATTGGCTCAATTGCCTTTTGCAAAGCAAATTCTTTGGTTCTTGTGTTCATCATCAAAACAATACAAAGAATGAAAAGAATGTGTTTTGCATAGACTGTGGGATTGCCATCTGTAGGCATTGCTTGATATCTCATTGCATACATCGGCGTCTGCAGATCTGCAAATACGTTTATCAGTACGTCGTTCGTGTGCCAGACTTGCAGAAGTACCTTGATTGTTGCAACATTCAGACTTATAAGATAAATGGGGAGAAGGCTGTTCATTTGAGTCCTCGTCCGCAATCCAAAGATTCGAAACCGTCAACAAAACTGAAGTTTGGAGGTACTTGTGAAGCTTGTGGGAGATTCATACAAGACCTGCCTAACCGCTTCTGCTCAATCGCTTGCAAAGTGTCTATGGTTCCAATGGAACTAAACAATCAAAACAGTAAATGCATCGCTTCTGAAGCGAATCTCAATGACATTCCATGGAAGGAAAATCAAAACCTCGAAACCAATATGAGTGAAATGGAATCGTCTATCTCAATGGCTGAATCAACTGAAGAGATCAAAGCATGGCGAGTAAACTCGATCTTGAATCCGAAGAAGCTTTTACATAAAAGGAAGGGCATTCCGCATCGATCGCCTCTAAAGTAA

Protein sequence

MAGCKIYLKKRKTDWLNCLLQSKFFGSCVHHQNNTKNEKNVFCIDCGIAICRHCLISHCIHRRLQICKYVYQYVVRVPDLQKYLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGGTCEACGRFIQDLPNRFCSIACKVSMVPMELNNQNSKCIASEANLNDIPWKENQNLETNMSEMESSISMAESTEEIKAWRVNSILNPKKLLHKRKGIPHRSPLK

Homology

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BLAST of Sed0020258 vs. NCBI nr
Match: XP_038875225.1 (uncharacterized protein LOC120067735 [Benincasa hispida])

HSP 1 Score: 423.7 bits (1088), Expect = 9.9e-115
Identity = 202/225 (89.78%), Postives = 211/225 (93.78%), Query Frame = 0


Query: 1   MAGCKIYLKKRKTDWLNCLLQSKFFGSCVHHQNNTKNEKNVFCIDCGIAICRHCLISHCI 60
           MAGCKIYLKKRKTDWLN LLQSKFFGSCVHHQNN KNEKNVFCIDCGIAICRHCLISHC+
Sbjct: 1   MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCV 60

Query: 61  HRRLQICKYVYQYVVRVPDLQKYLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120
           H+RLQICKYVYQYVVRVPDLQ  LDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG
Sbjct: 61  HQRLQICKYVYQYVVRVPDLQNLLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120

Query: 121 GTCEACGRFIQDLPNRFCSIACKVSMVPMELNNQNSKCIASEANLNDIPWKENQNLETNM 180
           GTCEACGR+IQDLPNRFCSIACKVSMVP+ELNNQN +CI SE+NL  IPW EN NLETN 
Sbjct: 121 GTCEACGRYIQDLPNRFCSIACKVSMVPVELNNQNCRCIDSESNLKGIPWTENHNLETNT 180

Query: 181 SEME-SSISMAESTEEIKAWRVNSILNPKKLLHKRKGIPHRSPLK 225
           SEME SSIS+AESTEEIKAWRV ++LNPKKLLHKRKGIPHRS LK
Sbjct: 181 SEMESSSISVAESTEEIKAWRVKTVLNPKKLLHKRKGIPHRSHLK 225

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BLAST of Sed0020258 vs. NCBI nr
Match: XP_004142823.1 (uncharacterized protein LOC101210438 [Cucumis sativus] >KGN51458.1 hypothetical protein Csa_009445 [Cucumis sativus])

HSP 1 Score: 423.3 bits (1087), Expect = 1.3e-114
Identity = 203/225 (90.22%), Postives = 210/225 (93.33%), Query Frame = 0


Query: 1   MAGCKIYLKKRKTDWLNCLLQSKFFGSCVHHQNNTKNEKNVFCIDCGIAICRHCLISHCI 60
           MAGCKIYLKKRKTDWLN LLQSKFFGSCVHHQNN KNEKNVFCIDCGIAICRHCLISHC+
Sbjct: 1   MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCV 60

Query: 61  HRRLQICKYVYQYVVRVPDLQKYLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120
           HRRLQICKYVYQYVVRVPDLQ +LDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG
Sbjct: 61  HRRLQICKYVYQYVVRVPDLQDHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120

Query: 121 GTCEACGRFIQDLPNRFCSIACKVSMVPMELNNQNSKCIASEANLNDIPWKENQNLETNM 180
           GTCEACGR+IQDLPNRFCSIACKVSMVPMELNNQ  + + SE NL DIPWKEN NLE N 
Sbjct: 121 GTCEACGRYIQDLPNRFCSIACKVSMVPMELNNQCCRFMDSEPNLKDIPWKENHNLEINT 180

Query: 181 SEME-SSISMAESTEEIKAWRVNSILNPKKLLHKRKGIPHRSPLK 225
           SEME SSIS+AESTEEIKAWRV  +LNPKKLLHKRKGIPHRSPLK
Sbjct: 181 SEMESSSISVAESTEEIKAWRVKMVLNPKKLLHKRKGIPHRSPLK 225

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BLAST of Sed0020258 vs. NCBI nr
Match: XP_008467074.1 (PREDICTED: uncharacterized protein LOC103504510 [Cucumis melo])

HSP 1 Score: 422.9 bits (1086), Expect = 1.7e-114
Identity = 203/225 (90.22%), Postives = 211/225 (93.78%), Query Frame = 0


Query: 1   MAGCKIYLKKRKTDWLNCLLQSKFFGSCVHHQNNTKNEKNVFCIDCGIAICRHCLISHCI 60
           MAGCKI+LKKRKTDWLN LLQSKFFGSCVHHQNN KNEKNVFCIDCGIAICRHCLISHC+
Sbjct: 1   MAGCKIFLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCV 60

Query: 61  HRRLQICKYVYQYVVRVPDLQKYLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120
           HRRLQICKYVYQYVVRVPDLQ +LDCCNIQTYKINGEKAVHL PRPQSKDSKPSTKLKFG
Sbjct: 61  HRRLQICKYVYQYVVRVPDLQDHLDCCNIQTYKINGEKAVHLCPRPQSKDSKPSTKLKFG 120

Query: 121 GTCEACGRFIQDLPNRFCSIACKVSMVPMELNNQNSKCIASEANLNDIPWKENQNLETNM 180
           GTCEACGR+IQDLPNRFCSIACKVSMVPMELNNQ  + I SE+NL DIPWKEN NLE N 
Sbjct: 121 GTCEACGRYIQDLPNRFCSIACKVSMVPMELNNQCCRFIDSESNLKDIPWKENHNLEINT 180

Query: 181 SEME-SSISMAESTEEIKAWRVNSILNPKKLLHKRKGIPHRSPLK 225
           SEME SSIS+AESTEEIKAWRV +ILNPKKLLHKRKGIPHRSPLK
Sbjct: 181 SEMESSSISVAESTEEIKAWRVKTILNPKKLLHKRKGIPHRSPLK 225

[Close]

BLAST of Sed0020258 vs. NCBI nr
Match: XP_022963423.1 (uncharacterized protein LOC111463631 [Cucurbita moschata] >XP_023545157.1 uncharacterized protein LOC111804538 [Cucurbita pepo subsp. pepo] >KAG6601888.1 hypothetical protein SDJN03_07121, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032586.1 hypothetical protein SDJN02_06635 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 418.7 bits (1075), Expect = 3.2e-113
Identity = 197/224 (87.95%), Postives = 211/224 (94.20%), Query Frame = 0


Query: 1   MAGCKIYLKKRKTDWLNCLLQSKFFGSCVHHQNNTKNEKNVFCIDCGIAICRHCLISHCI 60
           MAGCKIYLKKRK DWL+ LLQSKFFGSCVHHQNN KNEKNVFCIDCGIAICRHCLISHCI
Sbjct: 1   MAGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCI 60

Query: 61  HRRLQICKYVYQYVVRVPDLQKYLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120
           HRRLQICKYVYQYVVRVPDLQ +LDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG
Sbjct: 61  HRRLQICKYVYQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120

Query: 121 GTCEACGRFIQDLPNRFCSIACKVSMVPMELNNQNSKCIASEANLNDIPWKENQNLETNM 180
           GTCEACGR+IQDLPNRFCSIACKVSMVP+ELNNQ+ +CI S+++ N+I WKEN N+E N 
Sbjct: 121 GTCEACGRYIQDLPNRFCSIACKVSMVPVELNNQSCRCITSKSDPNEISWKENHNVEPNT 180

Query: 181 SEMESSISMAESTEEIKAWRVNSILNPKKLLHKRKGIPHRSPLK 225
           SEM+SSISMAESTEEIKAW+V S LNP+KLLHKRKGIPHRSPLK
Sbjct: 181 SEMKSSISMAESTEEIKAWQVKSGLNPRKLLHKRKGIPHRSPLK 224

[Close]

BLAST of Sed0020258 vs. NCBI nr
Match: XP_022990994.1 (uncharacterized protein LOC111487719 [Cucurbita maxima])

HSP 1 Score: 415.6 bits (1067), Expect = 2.7e-112
Identity = 196/224 (87.50%), Postives = 210/224 (93.75%), Query Frame = 0


Query: 1   MAGCKIYLKKRKTDWLNCLLQSKFFGSCVHHQNNTKNEKNVFCIDCGIAICRHCLISHCI 60
           MAGCKIYLKKRK DWL+ LLQSKFFGSCVHHQNN KNEKNVFCIDCGIAICRHCLISHCI
Sbjct: 1   MAGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCI 60

Query: 61  HRRLQICKYVYQYVVRVPDLQKYLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120
           HRRLQICKYVYQYVVRVPDLQ +LDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG
Sbjct: 61  HRRLQICKYVYQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120

Query: 121 GTCEACGRFIQDLPNRFCSIACKVSMVPMELNNQNSKCIASEANLNDIPWKENQNLETNM 180
           GTCEACGR+IQDLPNRFCSIACKVSMV +ELNNQ+ +CI S+++ N+I WKEN N+E N 
Sbjct: 121 GTCEACGRYIQDLPNRFCSIACKVSMVSVELNNQSCRCITSKSDPNEISWKENHNVEPNT 180

Query: 181 SEMESSISMAESTEEIKAWRVNSILNPKKLLHKRKGIPHRSPLK 225
           SEM+SSISMAESTEEIKAW+V S LNP+KLLHKRKGIPHRSPLK
Sbjct: 181 SEMKSSISMAESTEEIKAWQVKSGLNPRKLLHKRKGIPHRSPLK 224

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BLAST of Sed0020258 vs. ExPASy Swiss-Prot
Match: Q1G3Q4 (Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=RITF1 PE=1 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.9e-28
Identity = 61/137 (44.53%), Postives = 83/137 (60.58%), Query Frame = 0


Query: 11  RKTDWLNCLLQSKFFGSCVHHQNNTKNEKNVFCIDCGIAICRHCLISHCIHRRLQICKYV 70
           +K  WL+ L   KFF  C +H+   KNE+NV C+DC  ++C HC+ SH  HR LQ+ +YV
Sbjct: 4   QKPAWLDALYAEKFFVGCPYHETAKKNERNVCCLDCCTSLCPHCVPSHRFHRLLQVRRYV 63

Query: 71  YQYVVRVPDLQKYLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGGTCEACGRFI 130
           Y  VVR+ DLQK +DC N+Q Y IN  K V +  RPQ++  K +     G  C +C R +
Sbjct: 64  YHDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGA-----GNYCTSCDRSL 123

Query: 131 QDLPNRFCSIACKVSMV 148
           Q+ P   CS+ CKV  V
Sbjct: 124 QE-PYIHCSLGCKVDFV 134

[Close]

BLAST of Sed0020258 vs. ExPASy TrEMBL
Match: A0A0A0KPD0 (B box-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G550220 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 6.2e-115
Identity = 203/225 (90.22%), Postives = 210/225 (93.33%), Query Frame = 0


Query: 1   MAGCKIYLKKRKTDWLNCLLQSKFFGSCVHHQNNTKNEKNVFCIDCGIAICRHCLISHCI 60
           MAGCKIYLKKRKTDWLN LLQSKFFGSCVHHQNN KNEKNVFCIDCGIAICRHCLISHC+
Sbjct: 1   MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCV 60

Query: 61  HRRLQICKYVYQYVVRVPDLQKYLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120
           HRRLQICKYVYQYVVRVPDLQ +LDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG
Sbjct: 61  HRRLQICKYVYQYVVRVPDLQDHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120

Query: 121 GTCEACGRFIQDLPNRFCSIACKVSMVPMELNNQNSKCIASEANLNDIPWKENQNLETNM 180
           GTCEACGR+IQDLPNRFCSIACKVSMVPMELNNQ  + + SE NL DIPWKEN NLE N 
Sbjct: 121 GTCEACGRYIQDLPNRFCSIACKVSMVPMELNNQCCRFMDSEPNLKDIPWKENHNLEINT 180

Query: 181 SEME-SSISMAESTEEIKAWRVNSILNPKKLLHKRKGIPHRSPLK 225
           SEME SSIS+AESTEEIKAWRV  +LNPKKLLHKRKGIPHRSPLK
Sbjct: 181 SEMESSSISVAESTEEIKAWRVKMVLNPKKLLHKRKGIPHRSPLK 225

[Close]

BLAST of Sed0020258 vs. ExPASy TrEMBL
Match: A0A1S3CSV3 (uncharacterized protein LOC103504510 OS=Cucumis melo OX=3656 GN=LOC103504510 PE=4 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 8.1e-115
Identity = 203/225 (90.22%), Postives = 211/225 (93.78%), Query Frame = 0


Query: 1   MAGCKIYLKKRKTDWLNCLLQSKFFGSCVHHQNNTKNEKNVFCIDCGIAICRHCLISHCI 60
           MAGCKI+LKKRKTDWLN LLQSKFFGSCVHHQNN KNEKNVFCIDCGIAICRHCLISHC+
Sbjct: 1   MAGCKIFLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCV 60

Query: 61  HRRLQICKYVYQYVVRVPDLQKYLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120
           HRRLQICKYVYQYVVRVPDLQ +LDCCNIQTYKINGEKAVHL PRPQSKDSKPSTKLKFG
Sbjct: 61  HRRLQICKYVYQYVVRVPDLQDHLDCCNIQTYKINGEKAVHLCPRPQSKDSKPSTKLKFG 120

Query: 121 GTCEACGRFIQDLPNRFCSIACKVSMVPMELNNQNSKCIASEANLNDIPWKENQNLETNM 180
           GTCEACGR+IQDLPNRFCSIACKVSMVPMELNNQ  + I SE+NL DIPWKEN NLE N 
Sbjct: 121 GTCEACGRYIQDLPNRFCSIACKVSMVPMELNNQCCRFIDSESNLKDIPWKENHNLEINT 180

Query: 181 SEME-SSISMAESTEEIKAWRVNSILNPKKLLHKRKGIPHRSPLK 225
           SEME SSIS+AESTEEIKAWRV +ILNPKKLLHKRKGIPHRSPLK
Sbjct: 181 SEMESSSISVAESTEEIKAWRVKTILNPKKLLHKRKGIPHRSPLK 225

[Close]

BLAST of Sed0020258 vs. ExPASy TrEMBL
Match: A0A6J1HHR7 (uncharacterized protein LOC111463631 OS=Cucurbita moschata OX=3662 GN=LOC111463631 PE=4 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 1.5e-113
Identity = 197/224 (87.95%), Postives = 211/224 (94.20%), Query Frame = 0


Query: 1   MAGCKIYLKKRKTDWLNCLLQSKFFGSCVHHQNNTKNEKNVFCIDCGIAICRHCLISHCI 60
           MAGCKIYLKKRK DWL+ LLQSKFFGSCVHHQNN KNEKNVFCIDCGIAICRHCLISHCI
Sbjct: 1   MAGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCI 60

Query: 61  HRRLQICKYVYQYVVRVPDLQKYLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120
           HRRLQICKYVYQYVVRVPDLQ +LDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG
Sbjct: 61  HRRLQICKYVYQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120

Query: 121 GTCEACGRFIQDLPNRFCSIACKVSMVPMELNNQNSKCIASEANLNDIPWKENQNLETNM 180
           GTCEACGR+IQDLPNRFCSIACKVSMVP+ELNNQ+ +CI S+++ N+I WKEN N+E N 
Sbjct: 121 GTCEACGRYIQDLPNRFCSIACKVSMVPVELNNQSCRCITSKSDPNEISWKENHNVEPNT 180

Query: 181 SEMESSISMAESTEEIKAWRVNSILNPKKLLHKRKGIPHRSPLK 225
           SEM+SSISMAESTEEIKAW+V S LNP+KLLHKRKGIPHRSPLK
Sbjct: 181 SEMKSSISMAESTEEIKAWQVKSGLNPRKLLHKRKGIPHRSPLK 224

[Close]

BLAST of Sed0020258 vs. ExPASy TrEMBL
Match: A0A6J1JTJ5 (uncharacterized protein LOC111487719 OS=Cucurbita maxima OX=3661 GN=LOC111487719 PE=4 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 1.3e-112
Identity = 196/224 (87.50%), Postives = 210/224 (93.75%), Query Frame = 0


Query: 1   MAGCKIYLKKRKTDWLNCLLQSKFFGSCVHHQNNTKNEKNVFCIDCGIAICRHCLISHCI 60
           MAGCKIYLKKRK DWL+ LLQSKFFGSCVHHQNN KNEKNVFCIDCGIAICRHCLISHCI
Sbjct: 1   MAGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCI 60

Query: 61  HRRLQICKYVYQYVVRVPDLQKYLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120
           HRRLQICKYVYQYVVRVPDLQ +LDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG
Sbjct: 61  HRRLQICKYVYQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120

Query: 121 GTCEACGRFIQDLPNRFCSIACKVSMVPMELNNQNSKCIASEANLNDIPWKENQNLETNM 180
           GTCEACGR+IQDLPNRFCSIACKVSMV +ELNNQ+ +CI S+++ N+I WKEN N+E N 
Sbjct: 121 GTCEACGRYIQDLPNRFCSIACKVSMVSVELNNQSCRCITSKSDPNEISWKENHNVEPNT 180

Query: 181 SEMESSISMAESTEEIKAWRVNSILNPKKLLHKRKGIPHRSPLK 225
           SEM+SSISMAESTEEIKAW+V S LNP+KLLHKRKGIPHRSPLK
Sbjct: 181 SEMKSSISMAESTEEIKAWQVKSGLNPRKLLHKRKGIPHRSPLK 224

[Close]

BLAST of Sed0020258 vs. ExPASy TrEMBL
Match: A0A6J1CYJ3 (uncharacterized protein LOC111015643 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111015643 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 3.0e-109
Identity = 193/224 (86.16%), Postives = 205/224 (91.52%), Query Frame = 0


Query: 1   MAGCKIYLKKRKTDWLNCLLQSKFFGSCVHHQNNTKNEKNVFCIDCGIAICRHCLISHCI 60
           MAGCKIYLKKRK DWL+ LLQSKFFGSC HHQNN KNEKNVFC+DCG+AICRHCLISHCI
Sbjct: 1   MAGCKIYLKKRKADWLSSLLQSKFFGSCGHHQNNRKNEKNVFCLDCGVAICRHCLISHCI 60

Query: 61  HRRLQICKYVYQYVVRVPDLQKYLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120
           HRRLQICKYVYQYVVRV DLQ +LDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG
Sbjct: 61  HRRLQICKYVYQYVVRVHDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120

Query: 121 GTCEACGRFIQDLPNRFCSIACKVSMVPMELNNQNSKCIASEANLNDIPWKENQNLETNM 180
           GTCEACGR+IQDLPNRFCSIACKVSM P+ELN+Q+S+ +ASE NL D+  KEN N ETN 
Sbjct: 121 GTCEACGRYIQDLPNRFCSIACKVSMAPVELNDQSSRFMASEPNLKDLTCKENHNPETNT 180

Query: 181 SEMESSISMAESTEEIKAWRVNSILNPKKLLHKRKGIPHRSPLK 225
           SE+ESSISMAESTEEIKAWR  S LN KKLLHKRKGIPHRSPLK
Sbjct: 181 SEIESSISMAESTEEIKAWRTKSSLNAKKLLHKRKGIPHRSPLK 224

[Close]

BLAST of Sed0020258 vs. TAIR 10
Match: AT2G01818.1 (PLATZ transcription factor family protein )

HSP 1 Score: 195.7 bits (496), Expect = 4.1e-50
Identity = 103/221 (46.61%), Postives = 145/221 (65.61%), Query Frame = 0


Query: 9   KKRKTD--WLNCLLQSKFFGSCVHHQNNTKNEKNVFCIDCGIAICRHC----LISHCIHR 68
           +KR+++  W+  LL S+FFG C++H+   KNEKNVFCIDC + ICRHC      SH +HR
Sbjct: 5   EKRRSEEVWIETLLNSEFFGICMNHKYLRKNEKNVFCIDCNVEICRHCCNTVTDSHFLHR 64

Query: 69  RLQICKYVYQYVVRVPDLQKYLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGGT 128
           RLQICKYVYQ V+R+ ++Q Y DC  IQTYKINGEKA+HL+ RPQ+KD++PSTK K G +
Sbjct: 65  RLQICKYVYQDVIRLLEIQNYFDCSEIQTYKINGEKAIHLNSRPQAKDARPSTKAKNGAS 124

Query: 129 CEACGRFIQDLPNRFCSIACKVSMVPMELNNQNSKCIASEANLNDIPWKENQNLETNMSE 188
           C  C R+IQD PN FCSI+CK+S      + ++  C + +     +  KE+   E ++ E
Sbjct: 125 CVTCKRYIQDHPNLFCSISCKISTP----SKKHKFCFSPKLE-QSVLEKEHSTQEGSLEE 184

Query: 189 MES-SISMAESTEEIKAWRVNSILNPKKLLHKRKGIPHRSP 223
            +S + S+ + +E+ +    +    P   + KRKGI  RSP
Sbjct: 185 KKSCTSSLTDVSEDSEVLLSDFSFRPLLRILKRKGISRRSP 220

[Close]

BLAST of Sed0020258 vs. TAIR 10
Match: AT3G60670.1 (PLATZ transcription factor family protein )

HSP 1 Score: 129.4 bits (324), Expect = 3.6e-30
Identity = 64/135 (47.41%), Postives = 84/135 (62.22%), Query Frame = 0


Query: 15  WLNCLLQSKFFGSCVHHQNNTKNEKNVFCIDCGIAICRHCLISHCIHRRLQICKYVYQYV 74
           WL  LL+ KFF +C+ H+++ KNEKN+ CIDC + IC HCL SH  HR LQI +YVY+ V
Sbjct: 9   WLEVLLKDKFFNACLDHEDDKKNEKNILCIDCCLTICPHCLSSHTSHRLLQIRRYVYRDV 68

Query: 75  VRVPDLQKYLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGGTCEACGRFIQDLP 134
           +RV D  K +DC  IQ Y  N  K V ++ RPQS+  + S     G  C  C R +Q  P
Sbjct: 69  LRVEDGSKLMDCSLIQPYTTNSSKVVFINERPQSRQFRGS-----GNICITCDRSLQS-P 128

Query: 135 NRFCSIACKVSMVPM 150
             FC ++CK+S V M
Sbjct: 129 YLFCCLSCKISDVIM 137

[Close]

BLAST of Sed0020258 vs. TAIR 10
Match: AT2G12646.1 (PLATZ transcription factor family protein )

HSP 1 Score: 127.5 bits (319), Expect = 1.4e-29
Identity = 61/137 (44.53%), Postives = 83/137 (60.58%), Query Frame = 0


Query: 11  RKTDWLNCLLQSKFFGSCVHHQNNTKNEKNVFCIDCGIAICRHCLISHCIHRRLQICKYV 70
           +K  WL+ L   KFF  C +H+   KNE+NV C+DC  ++C HC+ SH  HR LQ+ +YV
Sbjct: 4   QKPAWLDALYAEKFFVGCPYHETAKKNERNVCCLDCCTSLCPHCVPSHRFHRLLQVRRYV 63

Query: 71  YQYVVRVPDLQKYLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGGTCEACGRFI 130
           Y  VVR+ DLQK +DC N+Q Y IN  K V +  RPQ++  K +     G  C +C R +
Sbjct: 64  YHDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGA-----GNYCTSCDRSL 123

Query: 131 QDLPNRFCSIACKVSMV 148
           Q+ P   CS+ CKV  V
Sbjct: 124 QE-PYIHCSLGCKVDFV 134

[Close]

BLAST of Sed0020258 vs. TAIR 10
Match: AT1G31040.1 (PLATZ transcription factor family protein )

HSP 1 Score: 116.3 bits (290), Expect = 3.1e-26
Identity = 76/231 (32.90%), Postives = 118/231 (51.08%), Query Frame = 0


Query: 12  KTDWLNCLLQSKFFGSCVHHQNNTKNEKNVFCIDCGIAICRHCLISHCIHRRLQICKYVY 71
           K  WL  L+   FF SC  H+   K+EKNVFC+ C +++C HCL SH  H  LQ+ +YVY
Sbjct: 18  KPAWLEGLMAETFFSSCGIHETRRKSEKNVFCLLCCLSVCPHCLPSHRSHPLLQVRRYVY 77

Query: 72  QYVVRVPDLQKYLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGGTCEACGRFIQ 131
             VVR+ DL+K +DC  +Q Y ING K + L+ R QS+    S        C  C R +Q
Sbjct: 78  HDVVRLSDLEKLIDCSYVQPYTINGAKVIFLNQRQQSRAKVSS------NVCFTCDRILQ 137

Query: 132 DLPNRFCSIACKVSMVPMELNNQNS---KCIASEANLNDIPWKENQNLE--TNMSEMESS 191
           + P  FCS++CKV  +  + ++ +S   +   S+     +    +  L   + M + E  
Sbjct: 138 E-PFHFCSLSCKVDYLSYQGDDLSSILYRIDESDFTFEGLRMDGHDQLGEISTMEDGEDI 197

Query: 192 ISMAESTEE-----------IKAWRVNSILNPKKLL----HKRKGIPHRSP 223
           + +++ +E+            K  +  S   P  +L    ++RKG PHR+P
Sbjct: 198 LVISDESEQGNNSHKKEKKKSKKKKPESNYLPGMVLSSLGNRRKGAPHRAP 241

[Close]

BLAST of Sed0020258 vs. TAIR 10
Match: AT4G17900.1 (PLATZ transcription factor family protein )

HSP 1 Score: 113.6 bits (283), Expect = 2.0e-25
Identity = 72/220 (32.73%), Postives = 112/220 (50.91%), Query Frame = 0


Query: 9   KKRKTDWLNCLLQSKFFGSCVHHQNNTKNEKNVFCIDC-GIAICRHCLISHCIHRRLQIC 68
           + R   WL  LL+ +FF  C  H ++ K+E N++C+DC    +C  CL  H  HR +QI 
Sbjct: 30  ENRWPPWLKPLLKEQFFVHCKFHGDSHKSECNMYCLDCTNGPLCSLCLAHHKDHRTIQIR 89

Query: 69  KYVYQYVVRVPDLQKYLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGGTCEACG 128
           +  Y  V+RV ++QKYLD   IQTY IN  K V L+ RPQ +  K  T      TC+ C 
Sbjct: 90  RSSYHDVIRVNEIQKYLDIGGIQTYVINSAKVVFLNERPQPRPGKGVT-----NTCKVCY 149

Query: 129 RFIQDLPNRFCSIACKVSMVPMELNNQNSKCIASEANLNDIPWKENQNLETNMSEMESSI 188
           R + D   RFCS+ CK++                         K  +NL     +  SSI
Sbjct: 150 RSLVDDSFRFCSLGCKIAGTSRGFE------------------KGRENLLMETEDSSSSI 209

Query: 189 SMAESTEEIKAWRVN----SILNPKKLLHKRKGIPHRSPL 224
           ++ ++   ++++  +    +  +  +++ +RKGIPHRSP+
Sbjct: 210 AIGKNITNLQSFSPSTPPLTTSSNCRIVKRRKGIPHRSPM 226

The following BLAST results are available for this feature:

BLAST of Sed0020258 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875225.1	9.9e-115	89.78	uncharacterized protein LOC120067735 [Benincasa hispida]	[more]
XP_004142823.1	1.3e-114	90.22	uncharacterized protein LOC101210438 [Cucumis sativus] >KGN51458.1 hypothetical ...	[more]
XP_008467074.1	1.7e-114	90.22	PREDICTED: uncharacterized protein LOC103504510 [Cucumis melo]	[more]
XP_022963423.1	3.2e-113	87.95	uncharacterized protein LOC111463631 [Cucurbita moschata] >XP_023545157.1 unchar...	[more]
XP_022990994.1	2.7e-112	87.50	uncharacterized protein LOC111487719 [Cucurbita maxima]	[more]

BLAST of Sed0020258 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1G3Q4	1.9e-28	44.53	Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Sed0020258 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPD0	6.2e-115	90.22	B box-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G550220 ...	[more]
A0A1S3CSV3	8.1e-115	90.22	uncharacterized protein LOC103504510 OS=Cucumis melo OX=3656 GN=LOC103504510 PE=...	[more]
A0A6J1HHR7	1.5e-113	87.95	uncharacterized protein LOC111463631 OS=Cucurbita moschata OX=3662 GN=LOC1114636...	[more]
A0A6J1JTJ5	1.3e-112	87.50	uncharacterized protein LOC111487719 OS=Cucurbita maxima OX=3661 GN=LOC111487719...	[more]
A0A6J1CYJ3	3.0e-109	86.16	uncharacterized protein LOC111015643 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Sed0020258 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01818.1	4.1e-50	46.61	PLATZ transcription factor family protein	[more]
AT3G60670.1	3.6e-30	47.41	PLATZ transcription factor family protein	[more]
AT2G12646.1	1.4e-29	44.53	PLATZ transcription factor family protein	[more]
AT1G31040.1	3.1e-26	32.90	PLATZ transcription factor family protein	[more]
AT4G17900.1	2.0e-25	32.73	PLATZ transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 173..193
None	No IPR available	PANTHER	PTHR31065:SF41	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 1..223
None	No IPR available	PANTHER	PTHR31065	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 1..223
IPR006734	PLATZ transcription factor	PFAM	PF04640	PLATZ	coord: 68..144 e-value: 1.3E-24 score: 86.6
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 28..66 score: 8.944252

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0020258.1	Sed0020258.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding