Sed0020257 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTGTGGATGGAAAATTTGTTGGAACACAAACAAAGTTGTTCTATATTGGTTAGATGAAGGAAAGATCGTGGATATATAAGTTATGACAACTATTTCTATTTGTATGAGGCATTTTAGGTGAAACCAAAAGCAAAATGATAAATGTATATGCTCAAAGTAGAAAATATCACATCAATGTGAACATTACGCTCACATAACCATGTCGGTAGATCGCCCTAGGATAAAGACGTTTGGCGCCAAAAAACGAAAATTTGGGGGTAGCTTAACCAGACTGGCGATGTACTCTCATGAGAAAAAGAGTTTTGTCTATATTGAGGAGTTGGTCGGAATGTCATTTAGATGGATGGACAATATGTTCAAAGGGAGAATTGAATCCTCAAGTGTCGAACACAGAAGATCCACGAAAAGGCTCAATAAAACTTCGTTTGGGAAAAGGATTGTTGGGATGCAAATAAAGTTGTTTCACATTGTTTATATAAGGAGAAGATCATTGGTATATAAGTGAAGATAACCATCTTCATTAGAATGAAGTCTTCTCATGAAATCAAAAATATAGTTATGACTTGGGGCATATATCCAAAGTAGATTTAAATTGTCAACAAAGAACAATAATTCAACCAACATAATTAAATATAAGAAGTTATAGATTCAAATCTGGTGATTCTATACTTAAAGTAGAAATAATACCTTTAAACATAGAAGATATTTGGTATAACGTGAAGTTGAACCACAGCATTTGTGCCACCTGGTATGCTCTAGAATGCACAGTGATGGCATCTTGTCCTCATGAAAAAACAAGAGAGAATCACGGGCACCACATAGCCTAATTCACGAGACGCCATAGTACTCCCATTGCCCACATATATTATATACATGTGTCACCCAGTTAGAATGTAATCACCATCGTATGCAAATACAAAAACCCAACAACACCATAATATTCCAACTCACAAACCACACATTTTATGACCCACAGTGGCTCCCAATATCGACGCTTCCCATTGCGCTCCACACAAACCAAACTCAAACCCCATAACACACATCTAGCAGCAACAAACAACAATCACCAGCCAGACCCCAACAATGAAAAGGCACCTGCTAGCCCTGTATCTCTTCCTGGCCATCCAAACGCCCCAAATACTCTGTCAGGACTTTCATCGAACACCTTATGTGCAAGTACAAAAAACCAACAAAAACCCGTTAGACAACGAAACCATCTACAGGGTTTCGAAGCAGCTATGCTGGGGGTGCATAAGCGAGTCGATCGAGTTTCTATTCGCACACAACCTGGTCCGGGCGGCGAAGCTGGAGCTGCCATTGGCGTGGAATTTCCAGCTGGAGAAGTACGCGAGGTGGTGGTCAGGGCAGAGAAAGGGGGATTGCAGACTGCAACACTCGTTCCCGGAAGACGGTTTCAAGCTCGGAGAGAACATATATTGGGGGAGCGGATCGGCGTGGAGGCCGACGGACGCGGTGACGGCGTGGGCCAGCGAAGTGAAGTACTATGAATATGCAACCAACAGGTGCGAGGATGGGCAAATGTGCGGCCATTATACGCAAATCGTGTGGCGAAATACGCAACGCATCGGCTGCGCTCGCGTCGTTTGCGACGATGGGGATGTGTTCATGACTTGTAACTACGACCCTCCTGGTAACTATGTGGGCCAGCGACCCTACTAAAGGACCAAGGTTGCTATTTTCATTTCTCTCAATTGTTAAATGAAGCATATTTAGCTAAAATAAATGGAAACTTACTGGAGA CTGTGGATGGAAAATTTGTTGGAACACAAACAAAGTTGTTCTATATTGGTTAGATGAAGGAAAGATCGTGGATATATAAGTTATGACAACTATTTCTATTTGTATGAGGCATTTTAGGTGAAACCAAAAGCAAAATGATAAATGTATATGCTCAAAGTAGAAAATATCACATCAATGTGAACATTACGCTCACATAACCATGTCGGTAGATCGCCCTAGGATAAAGACGTTTGGCGCCAAAAAACGAAAATTTGGGGGTAGCTTAACCAGACTGGCGATGTACTCTCATGAGAAAAAGAGTTTTGTCTATATTGAGGAGTTGGTCGGAATGTCATTTAGATGGATGGACAATATGTTCAAAGGGAGAATTGAATCCTCAAGTGTCGAACACAGAAGATCCACGAAAAGGCTCAATAAAACTTCGTTTGGGAAAAGGATTGTTGGGATGCAAATAAAGTTGTTTCACATTGTTTATATAAGGAGAAGATCATTGGTATATAAGTGAAGATAACCATCTTCATTAGAATGAAGTCTTCTCATGAAATCAAAAATATAGTTATGACTTGGGGCATATATCCAAAGTAGATTTAAATTGTCAACAAAGAACAATAATTCAACCAACATAATTAAATATAAGAAGTTATAGATTCAAATCTGGTGATTCTATACTTAAAGTAGAAATAATACCTTTAAACATAGAAGATATTTGGTATAACGTGAAGTTGAACCACAGCATTTGTGCCACCTGGTATGCTCTAGAATGCACAGTGATGGCATCTTGTCCTCATGAAAAAACAAGAGAGAATCACGGGCACCACATAGCCTAATTCACGAGACGCCATAGTACTCCCATTGCCCACATATATTATATACATGTGTCACCCAGTTAGAATGTAATCACCATCGTATGCAAATACAAAAACCCAACAACACCATAATATTCCAACTCACAAACCACACATTTTATGACCCACAGTGGCTCCCAATATCGACGCTTCCCATTGCGCTCCACACAAACCAAACTCAAACCCCATAACACACATCTAGCAGCAACAAACAACAATCACCAGCCAGACCCCAACAATGAAAAGGCACCTGCTAGCCCTGTATCTCTTCCTGGCCATCCAAACGCCCCAAATACTCTGTCAGGACTTTCATCGAACACCTTATGTGCAAGTACAAAAAACCAACAAAAACCCGTTAGACAACGAAACCATCTACAGGGTTTCGAAGCAGCTATGCTGGGGGTGCATAAGCGAGTCGATCGAGTTTCTATTCGCACACAACCTGGTCCGGGCGGCGAAGCTGGAGCTGCCATTGGCGTGGAATTTCCAGCTGGAGAAGTACGCGAGGTGGTGGTCAGGGCAGAGAAAGGGGGATTGCAGACTGCAACACTCGTTCCCGGAAGACGGTTTCAAGCTCGGAGAGAACATATATTGGGGGAGCGGATCGGCGTGGAGGCCGACGGACGCGGTGACGGCGTGGGCCAGCGAAGTGAAGTACTATGAATATGCAACCAACAGGTGCGAGGATGGGCAAATGTGCGGCCATTATACGCAAATCGTGTGGCGAAATACGCAACGCATCGGCTGCGCTCGCGTCGTTTGCGACGATGGGGATGTGTTCATGACTTGTAACTACGACCCTCCTGGTAACTATGTGGGCCAGCGACCCTACTAAAGGACCAAGGTTGCTATTTTCATTTCTCTCAATTGTTAAATGAAGCATATTTAGCTAAAATAAATGGAAACTTACTGGAGA ATGAAAAGGCACCTGCTAGCCCTGTATCTCTTCCTGGCCATCCAAACGCCCCAAATACTCTGTCAGGACTTTCATCGAACACCTTATGTGCAAGTACAAAAAACCAACAAAAACCCGTTAGACAACGAAACCATCTACAGGGTTTCGAAGCAGCTATGCTGGGGGTGCATAAGCGAGTCGATCGAGTTTCTATTCGCACACAACCTGGTCCGGGCGGCGAAGCTGGAGCTGCCATTGGCGTGGAATTTCCAGCTGGAGAAGTACGCGAGGTGGTGGTCAGGGCAGAGAAAGGGGGATTGCAGACTGCAACACTCGTTCCCGGAAGACGGTTTCAAGCTCGGAGAGAACATATATTGGGGGAGCGGATCGGCGTGGAGGCCGACGGACGCGGTGACGGCGTGGGCCAGCGAAGTGAAGTACTATGAATATGCAACCAACAGGTGCGAGGATGGGCAAATGTGCGGCCATTATACGCAAATCGTGTGGCGAAATACGCAACGCATCGGCTGCGCTCGCGTCGTTTGCGACGATGGGGATGTGTTCATGACTTGTAACTACGACCCTCCTGGTAACTATGTGGGCCAGCGACCCTACTAA MKRHLLALYLFLAIQTPQILCQDFHRTPYVQVQKTNKNPLDNETIYRVSKQLCWGCISESIEFLFAHNLVRAAKLELPLAWNFQLEKYARWWSGQRKGDCRLQHSFPEDGFKLGENIYWGSGSAWRPTDAVTAWASEVKYYEYATNRCEDGQMCGHYTQIVWRNTQRIGCARVVCDDGDVFMTCNYDPPGNYVGQRPY Homology
BLAST of Sed0020257 vs. NCBI nr
Match: XP_022934022.1 (pathogenesis-related protein PR-1-like [Cucurbita moschata] >AZZ86678.1 PR1 [Cucurbita moschata]) HSP 1 Score: 369.0 bits (946), Expect = 2.5e-98 Identity = 162/198 (81.82%), Postives = 177/198 (89.39%), Query Frame = 0
BLAST of Sed0020257 vs. NCBI nr
Match: XP_022971839.1 (pathogenesis-related protein PR-1-like [Cucurbita maxima]) HSP 1 Score: 366.3 bits (939), Expect = 1.7e-97 Identity = 162/198 (81.82%), Postives = 176/198 (88.89%), Query Frame = 0
BLAST of Sed0020257 vs. NCBI nr
Match: XP_023529291.1 (pathogenesis-related protein PR-1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 364.8 bits (935), Expect = 4.8e-97 Identity = 161/198 (81.31%), Postives = 176/198 (88.89%), Query Frame = 0
BLAST of Sed0020257 vs. NCBI nr
Match: XP_022135169.1 (pathogenesis-related protein PR-1-like [Momordica charantia]) HSP 1 Score: 360.9 bits (925), Expect = 6.9e-96 Identity = 160/194 (82.47%), Postives = 174/194 (89.69%), Query Frame = 0
BLAST of Sed0020257 vs. NCBI nr
Match: XP_038878734.1 (pathogenesis-related protein PR-1-like [Benincasa hispida]) HSP 1 Score: 360.5 bits (924), Expect = 9.1e-96 Identity = 163/198 (82.32%), Postives = 178/198 (89.90%), Query Frame = 0
BLAST of Sed0020257 vs. ExPASy Swiss-Prot
Match: Q40374 (Pathogenesis-related protein PR-1 OS=Medicago truncatula OX=3880 GN=PR-1 PE=2 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 7.1e-43 Identity = 75/138 (54.35%), Postives = 94/138 (68.12%), Query Frame = 0
BLAST of Sed0020257 vs. ExPASy Swiss-Prot
Match: Q00008 (Pathogenesis-related protein PRMS OS=Zea mays OX=4577 GN=PRMS PE=2 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 1.3e-36 Identity = 71/139 (51.08%), Postives = 93/139 (66.91%), Query Frame = 0
BLAST of Sed0020257 vs. ExPASy Swiss-Prot
Match: P35793 (Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare OX=4513 PE=2 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 3.8e-36 Identity = 69/139 (49.64%), Postives = 98/139 (70.50%), Query Frame = 0
BLAST of Sed0020257 vs. ExPASy Swiss-Prot
Match: Q05968 (Pathogenesis-related protein 1 OS=Hordeum vulgare OX=4513 PE=2 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 1.1e-35 Identity = 67/139 (48.20%), Postives = 98/139 (70.50%), Query Frame = 0
BLAST of Sed0020257 vs. ExPASy Swiss-Prot
Match: P35792 (Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare OX=4513 PE=2 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 4.2e-35 Identity = 67/139 (48.20%), Postives = 96/139 (69.06%), Query Frame = 0
BLAST of Sed0020257 vs. ExPASy TrEMBL
Match: A0A455PFZ5 (PR1 OS=Cucurbita moschata OX=3662 GN=LOC111441253 PE=2 SV=1) HSP 1 Score: 369.0 bits (946), Expect = 1.2e-98 Identity = 162/198 (81.82%), Postives = 177/198 (89.39%), Query Frame = 0
BLAST of Sed0020257 vs. ExPASy TrEMBL
Match: A0A6J1I9P4 (pathogenesis-related protein PR-1-like OS=Cucurbita maxima OX=3661 GN=LOC111470529 PE=4 SV=1) HSP 1 Score: 366.3 bits (939), Expect = 8.0e-98 Identity = 162/198 (81.82%), Postives = 176/198 (88.89%), Query Frame = 0
BLAST of Sed0020257 vs. ExPASy TrEMBL
Match: A0A6J1C0P6 (pathogenesis-related protein PR-1-like OS=Momordica charantia OX=3673 GN=LOC111007204 PE=4 SV=1) HSP 1 Score: 360.9 bits (925), Expect = 3.4e-96 Identity = 160/194 (82.47%), Postives = 174/194 (89.69%), Query Frame = 0
BLAST of Sed0020257 vs. ExPASy TrEMBL
Match: A0A0A0LUG8 (SCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G420360 PE=4 SV=1) HSP 1 Score: 352.8 bits (904), Expect = 9.1e-94 Identity = 158/196 (80.61%), Postives = 175/196 (89.29%), Query Frame = 0
BLAST of Sed0020257 vs. ExPASy TrEMBL
Match: A0A5A7UXS0 (Pathogenesis-related protein PR-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold499G00860 PE=4 SV=1) HSP 1 Score: 349.4 bits (895), Expect = 1.0e-92 Identity = 159/197 (80.71%), Postives = 174/197 (88.32%), Query Frame = 0
BLAST of Sed0020257 vs. TAIR 10
Match: AT4G25780.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein ) HSP 1 Score: 240.0 bits (611), Expect = 1.7e-63 Identity = 96/154 (62.34%), Postives = 123/154 (79.87%), Query Frame = 0
BLAST of Sed0020257 vs. TAIR 10
Match: AT4G30320.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein ) HSP 1 Score: 172.9 bits (437), Expect = 2.5e-43 Identity = 73/147 (49.66%), Postives = 99/147 (67.35%), Query Frame = 0
BLAST of Sed0020257 vs. TAIR 10
Match: AT4G25790.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein ) HSP 1 Score: 171.0 bits (432), Expect = 9.5e-43 Identity = 76/138 (55.07%), Postives = 94/138 (68.12%), Query Frame = 0
BLAST of Sed0020257 vs. TAIR 10
Match: AT5G57625.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein ) HSP 1 Score: 170.2 bits (430), Expect = 1.6e-42 Identity = 87/206 (42.23%), Postives = 122/206 (59.22%), Query Frame = 0
BLAST of Sed0020257 vs. TAIR 10
Match: AT4G31470.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein ) HSP 1 Score: 166.8 bits (421), Expect = 1.8e-41 Identity = 83/198 (41.92%), Postives = 113/198 (57.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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