Sed0020212 (gene) Chayote v1

Overview
NameSed0020212
Typegene
OrganismSechium edule (Chayote v1)
DescriptionZinc finger and BTB domain-containing protein 47
LocationLG11: 25493942 .. 25500035 (-)
RNA-Seq ExpressionSed0020212
SyntenySed0020212
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAATTCCCATCAGCCCATCAACTCATTGTCTCTTTTGCTTTCATCTTTCATAGGCCTCTTTTCCCTATCGCCTTCCTTTCACACCCCATTTTCTACTTACAAATTTCCACTCCATTTCTTCTTTTTTCTTTTTCTTTTTTTTTTTTTTTAATTCCATTCAACAATCTCTTCATTCACTGGGTATTGGAGCTCTCTGTGATTTCCTCTTTGATTATTTATTTGTTTGATGGGAAAGAAAAAACCCCACAAAACCAAACACATAGCCGCCGCCATAGCCGAAGCTTCCACCTCTAAATCACCCGAAGATGCCGGCGGCGGCGGCCAATCAGCACAGCCCAGAAAGAGGGGCCGCCCTCGGAAGGTTCTCGACGAGCCCCCGGACGAACAAGGGAATCAGGAACTGCCACCGCCGCCGCCGGATGTTGCTGATAAACCGCCGGAGAAGAAGGCTAAACTCACCGGAGATGAGCCGCCGCCGGCTGTCGTGGTCGGAGCTTCGAAACAACAAGAACAAGAAAAACCCAAACCGGGAGACGGTTCGAGAAGCAGAGGAAGGCGAAAGAACAAACCCAGAAAAAGTAGCTAACCAACGGGTAATCTATTGTTCTTTATTTCTTTCTTTTTCGATTTAGGAATCTGAAAGCCTTAAATTTTTTGTGGGTTTTAATTTCGTAAGAAGTTATAGCTAATTCGAAGTCATTGGAGAAGACTTAAAAATAAAATATCATCTAATGTATCCCGGTGCCACGGCCACGAATGGATTGGGGCTCGGGTATAGAGAAAGGAAGTTTCGATTTCCCGATTTTCGAAAAAGAAATGGTAAGAAGTTGGATTGGAAGTAAATGGAGGAATGGGAAATTGTATTGTGTTGGAATGGATTGATGGGATTGGATTTTGGTATTGGTTTTGGCTTTTGTTCATATATGTTGATTATTATCATTCTAATTTGAAACCACAAAACAATTTGTAGATGGATTGGGAAAAATTCATAGTATGGAGTGATTTGAAGTTTGTGTGTGGTTCTTCTTTCTTCTTATCTTATACTTAATTTCTCTGGCAATACTTTTTCTTTTTCTTTTTTTGACAATAGAAAAGAAAAACAAAGATTGTAACCTTTGTGTAAAGGGACAACTTGTTCGTTGAGATTGATTGATTGAAAGGAAAAAGAAGATAGGGAGGAGGAGAAAACTTGGACCTCAACATTGGTATTTATTTTAAAAAAACAAAACAAAAACAAAATTAGTTGGTTAAAATACCATTTTGGTCCTTCAACTTTGGGATTTATTTCATTTTGGTTCCTAGACTTTCAAATGTTCATTTTTAGTCCCTTGACTTTGTAGTTTGTTTAATTTTGGTCTCTTGACTTTACTATTTGTCCAATTTTAGTTCCTCGACTTTCAAATGTCCAAATTTAGTCTCTAGATTATCAAAAAAAGTTAAAAAATGGTCCTTTCGTCAAATAATTTTTTTTTCTCACTTCTAAATTATTTTCTCTCTCTTCCATCTTTCAACATTTTTCTTTCTAAAAGTTTTATCTTTCTTAAATCCACATCTCTAATCCTCTTCTCTTCTTCTTTTTCTCTTATTCTCTCCTCAATCCATCTCATCAAATTATTTAACATGAGATAATTTTTCTAAATAATTATTTTCATACTTTGATTTGTGATTTTTTGTTTTCTAAAATTCATAGTCTATCATGGAACAAAAAAGAAAAAAGAAAGAAAAGAAAAAGAAAAGATGGGAAGAGAGGTAGATTGAAGAGAGGTAAAATTTCTAGAGAGAGAAATTATGATAGATGAAAGAGAGAAAATAATTTAGGAGTGATAAAAAATTTATTTGACCAAAGGACAATTTTTAAACTTTTTTTATAGTCTAAAGACCAAATTTGAAAACATTTGAAAGTTGAGAGACCAAAATTGGACAAATAGAATAGTTGAGGGACCAAAATTGAACATTTGAAAGTTGAGAGACCAAAATTGGACAGACAACAAAGTTGAAGGACTAAAATTGGACATTTGAAAGTCGAGGAGCCAAAATGGAACAAACCTCAAAGTCGAGGGACCAAAATGATATTTTAACTAAATTAGTTAAACAATCAAAACATCTAATATAATTGCTTTTGAATCGTTTAATAATTAAACTTTATGGGTGTTTGTTTTTAGTACAAGTTGGGGGAGGGGGTTATAAATACCAATTTGATCGAACTCGTGACACTGGTGTTGAACAAATTTTCAACAAAACAATGAAATCACTGTGCCACTGATCCATTCGATAATTTTATGGGTGTTTGTTTACGGTATTTAGGAGGATTTATAATTCCTTTCCTAAAAAAAACAATAATAAATTTATATATATATATATATATATATATATATATATATATATATTTTTATTTAAACGAGTTTTTTTTGTAACTATTTAAAATAATTTTTTATTTTTATTATTCAAAATAACTTTTTATTTCTAACTATTTAAAATAATTTTTTATTTTTAATCGTTCATTTTTAATCATTCTTTTTTTAACTATTCAAAATAACTTATTCAGAATTTATATCTTAATAATTTATTGTTTTTAACTCTTCTACATAAAAATTACATCCAAAAGAGTTTTTGAATATAATTCTTAATTTTTAACCGCAAACTAACTCTTTAATTCAAACCTCAAGAATATTTTGTATTAGAAGAATAAAAATGATTATAGAAAAATTAAGTATTGGTCTAGAAGAAAATTGATTATTTTGTTTTGGAGATTTTCCATGTATAATAAAAAAAATAAAAACTAATTCGTTTGTAGTACAAAAATCTAAATTGAGTTTTTTTTTTTTTTTTTTGAAACAAGGTAACCACTTCCGTCCCTAGAGGAGTATATCCTCAAATCTCAAGTCTTCAACCACTGCTTCATTCCTTGGAGACCAAATTGAGTTCTATCATCCATAGAATTCAATAATTAATATACTTTTATCATTGGTTGAATTATATCACACTCATTCTATCATTAGTCACTAATAGAAAAGCATTTGCTATAAATAAACTATTTTAGAAATTATACTATAAATGAATTATTTTAAAAATTGTACTATAAATATATTATAAAAAATAGAGTTTGTTGTTGATGATAAATTTTCTTTTATTTAGGACAAAGAAAATTATTATAGCCAAAACGGTTACTTGTGATTTATCAATAGAATGATATAAAGAATAAAATATTGAATTTGAAGAAAACAAAACATAATTATAGAAATTATAAAAAGTGGTTAGGTGAAAAATAAAAAGTAGTGCAAAGGAACAAAATTTTACAGAATGATTTTCTATGATTATTCTCATTTTGCCCCATCTTAACTATCCACTTGAAAATTTGTAAACGTAAAACTTTGTTAGAGTTTTTTTTTTTTTTTAAATAGAAAGAAACTTCATAAAAAAAAATTAAACACTCATGCGAACTTGCTCCAACATTACCATAAAGGCAACAGCAGGGGGAGATTCCCTACTCAAAACCAAATCCCAATCCTAAATGTCAGAAAAAATAAAAGAACTACAAACCAAAGAACTCGAGGACAAGCACTGCTTGGCCAACAAATTTGCCACACAATAACACTTTCGCCGACTAAATAGAAAGGAGATATTCCTAAACAAAGGAATCATATCATGTATATTAGCTAAACCAGAGCTGAGTTCAGGTACAACTTGGGAAATACCATTAATTAGATTAATAACAGTGCTAGAATCAGATTCCACCAAGATTGGGGGAAGAGCATCAGAACCACAATCCAATAAACGTTGGAGCCCTTCCCTAATAGCCAAAACTTCCATCACCTTTGTAGACGACGCTTTAAACCCTCTCTCTTCCAACCGATCATTTTGGGCACTCACGGGCAGTCCCTCACAATCCAACCAACTCCACCGTAACCACTATCAGCATGCCACAACCCATCAACATTCAGCTTCCAATGACCATCATCAGGGGGAGACTACCTCAAACAACTAGCTACATTTTTATAAATGGACGAAGGAGCATCAATACCTGCAAGCACAGATGAGCCATGTGAGGAAATTGCATTAGAAATTTGAAGCAACAATCTATTTTTATCAGCCTTAGAATTGCTAAGAAGAACAGAATTTCGGTTATTCCACATTTTCCAAATCACAATTAAAGCTTTAATAAGAACGCCCTGAGGAAATCTTAGAACAAAGCTCTTGCCAGAAACTCACTCCAGAGTCAAAACCTTGAAAAAAGAAACAAAGTTAGAAATATAAGGAAAAAAAGAGCCCCACACCATAACCGCAAATTTGCAATCTTTGATCACCTTGTGGGAATCAAATTATTCAAAATATTCCAAGCACCCACCTTAATTTTAAGAGTCACCTCAACCTTCCAAAAGGACTTCCAAAAACTTTTTGACGAAGACTTGTCGGAGGAAGAGGCCTCTGAGGACTAAGACACATTCATAGCCAAGTGATAAGCACTTTTAACACTAAACAACCCATTCGGACTATAATTCCAAATAATTTCATCTTCTTTAGGCGAGGATCCCAACAGAGTGTTTAGAATAATATTAGCCTCCTGAACAAAGAAAAAAGTTTCGACTAAACTAGAATCCCAACGCCCATTCCCATCAATCAAGTTGGCAACCAAAAGATCCTTTGAAGAGCCAACCATGATATAAGCAAAAGAGTTGCCCTCTCTTCCCAACCAAGGGTCTCTACCCATAACAATTCCTCTTCCTTTCCCAACCCTCCAACGATAGCCCTTTTGAAAAAGTTCCCTGCCCCATAGAATTCTCCTCCAAACAAGCGAGGGAGAATTCCCAATTCGAGCACCCAAAAAATCACCATTACGAAAATACTTATCTATGTACACACGAGCCACCAAACTATCGGGATGATGAAGAATTCCCAATCCGGACACTATTTTAGGTTACCTAAAGGTATTGGGGAAGAGATTGATCGGACTTGCGCAAATTTTTGGTGGAACTATAATGGGGATCAGAGAAAAATGCATTGGGCTGGTTAGGTAAAGCTTGGGATTAGTAAGAAGATGAGAGGGCTTGGCTTTACGAGTTTAAGTTTGTTAGAATTTATATATATACATATATATATATATATATATATAAATTAATCTAATCATGACCAAATATATGTATAAGGTAGTGAGACTCAGTCTTTAATTTCGATGAAAATTTTCTATTGAGAAACATATATAATTAGTTAAATTCAAAAAATAAAAAATAATCCTAGTTACTTTTTTAAAAATTTAGCAATCATATTAATTGTAAAATATTGTATTAATAACATATAATATTGTATTAATAAGTATTAGTTATGCAATATTGAAGTGTATTTATAACTATAAATAAAAATGATTTCAAATTTAATTAGGTTGATTATTTATTTTGTTAGAATGGATTGTCTATTAGAATTTTTTTAAAAAAAAAATTTTAATCATGGAACCGATGAACTATATATAGCAAACAAGAGGATTAAAGAAGTATGTGAGTTCAAGGTCGATCATTGTTGTGGTAAGCAGGTTTTGGCATGAATTGTCAATTTCATTAGGCCTCGAGATTTTTATCAAATTTGGTTATTTTAATTCTCATGGTTTCCATGTCCAGATATAAGGATAAATTTTGTGTCCTGTTGTTAATTAAACGTGTTTTTGAATTCTATAATCCCCATGTAATCACCCGTCATATTATTCTGACCCCTTGAATAATAATTTGTCGTGCCAGCTACGAAATGTCACAATGATATGTGGAGCCAACTTCTGGATGTATGGCACGTGAGTGTCACGTGTCAATTATCAGCTACTACTAATTATGTTTTACTGCTGCATTGACCATGGATTTGGTGAACTTGATTGATGTGATGGGTTTAAAATAGTTGAAGAAGGAGCGTGGATTTCACCCTGATTTTGGCGCGTGAGGAGGTCATGTTATGACCATTTGCCCAAGTGGTTCTTTATTTATTTATTTTGTTTTTCCTTAAAAACCATCCTAGGACCGAAAGGCATATTTGACTTTCATAAGGGGCTGTTTGTTTGACGTATATAGGTAAGATTTAAGTATATTGAAGAGTTATACTAAAAAATTTATTTAG

mRNA sequence

AAAATTCCCATCAGCCCATCAACTCATTGTCTCTTTTGCTTTCATCTTTCATAGGCCTCTTTTCCCTATCGCCTTCCTTTCACACCCCATTTTCTACTTACAAATTTCCACTCCATTTCTTCTTTTTTCTTTTTCTTTTTTTTTTTTTTTAATTCCATTCAACAATCTCTTCATTCACTGGGTATTGGAGCTCTCTGTGATTTCCTCTTTGATTATTTATTTGTTTGATGGGAAAGAAAAAACCCCACAAAACCAAACACATAGCCGCCGCCATAGCCGAAGCTTCCACCTCTAAATCACCCGAAGATGCCGGCGGCGGCGGCCAATCAGCACAGCCCAGAAAGAGGGGCCGCCCTCGGAAGGTTCTCGACGAGCCCCCGGACGAACAAGGGAATCAGGAACTGCCACCGCCGCCGCCGGATGTTGCTGATAAACCGCCGGAGAAGAAGGCTAAACTCACCGGAGATGAGCCGCCGCCGGCTGTCGTGGTCGGAGCTTCGAAACAACAAGAACAAGAAAAACCCAAACCGGGAGACGGTTCGAGAAGCAGAGGAAGGCGAAAGAACAAACCCAGAAAAAGTAGCTAACCAACGGCTACGAAATGTCACAATGATATGTGGAGCCAACTTCTGGATGTATGGCACGTGAGTGTCACGTGTCAATTATCAGCTACTACTAATTATGTTTTACTGCTGCATTGACCATGGATTTGGTGAACTTGATTGATGTGATGGGTTTAAAATAGTTGAAGAAGGAGCGTGGATTTCACCCTGATTTTGGCGCGTGAGGAGGTCATGTTATGACCATTTGCCCAAGTGGTTCTTTATTTATTTATTTTGTTTTTCCTTAAAAACCATCCTAGGACCGAAAGGCATATTTGACTTTCATAAGGGGCTGTTTGTTTGACGTATATAGGTAAGATTTAAGTATATTGAAGAGTTATACTAAAAAATTTATTTAG

Coding sequence (CDS)

ATGGGAAAGAAAAAACCCCACAAAACCAAACACATAGCCGCCGCCATAGCCGAAGCTTCCACCTCTAAATCACCCGAAGATGCCGGCGGCGGCGGCCAATCAGCACAGCCCAGAAAGAGGGGCCGCCCTCGGAAGGTTCTCGACGAGCCCCCGGACGAACAAGGGAATCAGGAACTGCCACCGCCGCCGCCGGATGTTGCTGATAAACCGCCGGAGAAGAAGGCTAAACTCACCGGAGATGAGCCGCCGCCGGCTGTCGTGGTCGGAGCTTCGAAACAACAAGAACAAGAAAAACCCAAACCGGGAGACGGTTCGAGAAGCAGAGGAAGGCGAAAGAACAAACCCAGAAAAAGTAGCTAA

Protein sequence

MGKKKPHKTKHIAAAIAEASTSKSPEDAGGGGQSAQPRKRGRPRKVLDEPPDEQGNQELPPPPPDVADKPPEKKAKLTGDEPPPAVVVGASKQQEQEKPKPGDGSRSRGRRKNKPRKSS
Homology
[Close]
BLAST of Sed0020212 vs. NCBI nr
Match: KAG7020516.1 (hypothetical protein SDJN02_17201, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 144.1 bits (362), Expect = 8.0e-31
Identity = 89/121 (73.55%), Postives = 98/121 (80.99%), Query Frame = 0 

Query: 1   MGKKKPHKTKHIAAAIAEASTSKSPEDAG--GGGQSAQPRKRGRPRKVLDEPPDEQGNQE 60
           MGKKK  KTK I+ AIAE STSK P+D G  GGGQS QPRKRGRPRKVLDEPPD+   ++
Sbjct: 1   MGKKKTQKTKQISVAIAETSTSKLPDDGGAHGGGQSVQPRKRGRPRKVLDEPPDD---KK 60

Query: 61  LPPPPPDVADKPPEKKAKLTGDEPPPAVVVGASKQQEQEKPKPGDGSRSRGRRKNKPRKS 120
           LPPPP DVADKP +KK K TGDEPP + + GASKQ E E+PK GDGSRSRGRRKNKPRKS
Sbjct: 61  LPPPPADVADKPLQKKGKSTGDEPPDS-MEGASKQHESEEPKSGDGSRSRGRRKNKPRKS 117

[Close]
BLAST of Sed0020212 vs. NCBI nr
Match: XP_023537340.1 (uncharacterized protein LOC111798433 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 142.1 bits (357), Expect = 3.0e-30
Identity = 89/121 (73.55%), Postives = 98/121 (80.99%), Query Frame = 0 

Query: 1   MGKKKPHKTKHIAAAIAEASTSKSPEDAG--GGGQSAQPRKRGRPRKVLDEPPDEQGNQE 60
           MGKKK  KTK I+ AIAE STSK P+D G  GGGQS QPRKRGRPRKVLDEPPD++  + 
Sbjct: 1   MGKKKTQKTKQISVAIAEISTSKLPDDGGGHGGGQSVQPRKRGRPRKVLDEPPDDK--KL 60

Query: 61  LPPPPPDVADKPPEKKAKLTGDEPPPAVVVGASKQQEQEKPKPGDGSRSRGRRKNKPRKS 120
           LPPPP DVADKP +KK K TGDEPP + + GASKQ E E+PK GDGSRSRGRRKNKPRKS
Sbjct: 61  LPPPPADVADKPLQKKGKSTGDEPPIS-MEGASKQHESEEPKSGDGSRSRGRRKNKPRKS 118

[Close]
BLAST of Sed0020212 vs. NCBI nr
Match: XP_023002541.1 (uncharacterized protein LOC111496353 [Cucurbita maxima])

HSP 1 Score: 141.4 bits (355), Expect = 5.2e-30
Identity = 89/121 (73.55%), Postives = 98/121 (80.99%), Query Frame = 0 

Query: 1   MGKKKPHKTKHIAAAIAEASTSKSPEDAG--GGGQSAQPRKRGRPRKVLDEPPDEQGNQE 60
           MGKKK  KTK I+ AIAE STSK P+D G  GGGQS QPRKRGRPRKVLDEPPD++  + 
Sbjct: 33  MGKKKTQKTKQISVAIAETSTSKLPDDGGGHGGGQSEQPRKRGRPRKVLDEPPDDK--KL 92

Query: 61  LPPPPPDVADKPPEKKAKLTGDEPPPAVVVGASKQQEQEKPKPGDGSRSRGRRKNKPRKS 120
           LPPP  DVADKP +KK K TGDEPP + + GASKQQE E+PK GDGSRSRGRRKNKPRKS
Sbjct: 93  LPPPAADVADKPLQKKGKTTGDEPPIS-MEGASKQQESEEPKSGDGSRSRGRRKNKPRKS 150

[Close]
BLAST of Sed0020212 vs. NCBI nr
Match: XP_038884964.1 (uncharacterized protein LOC120075548 [Benincasa hispida])

HSP 1 Score: 127.9 bits (320), Expect = 5.9e-26
Identity = 82/119 (68.91%), Postives = 91/119 (76.47%), Query Frame = 0 

Query: 1   MGKKKPHKTKHIAAAIAEASTSKSPEDAGGGGQSAQPRKRGRPRKVLDEPPDEQGNQELP 60
           MGKKKP KTK IA AIAE S SK  +D  G GQS QPRKRGRPRKVLDEP ++Q N++L 
Sbjct: 1   MGKKKPQKTKEIAVAIAETSASKLADD--GIGQSIQPRKRGRPRKVLDEPQNKQENKKLL 60

Query: 61  PPPPDVADKPPEKKAKLTGDEPPPAVVVGASKQQEQEKPKPGDGSRSRGRRKNKPRKSS 120
           PP P+VA+ PPEKKAK T D+PPP  +   SKQ E   PK GDGSRSRGRRKNKPRKSS
Sbjct: 61  PPLPEVAENPPEKKAKTTVDQPPPGSMEEGSKQGE---PKTGDGSRSRGRRKNKPRKSS 114

[Close]
BLAST of Sed0020212 vs. NCBI nr
Match: KAA0065239.1 (zinc finger and BTB domain-containing protein 47 [Cucumis melo var. makuwa])

HSP 1 Score: 127.5 bits (319), Expect = 7.8e-26
Identity = 84/122 (68.85%), Postives = 91/122 (74.59%), Query Frame = 0 

Query: 1   MGKKKPHKTKHIAAAIAEASTSKSPEDAGGGGQSAQPRKRGRPRKVLDEPPDEQGNQELP 60
           MGKKK  KTK IA AIAE STSK  +D  G GQS QPRKRGRPRKVLDE  +EQ N++LP
Sbjct: 1   MGKKKTQKTKEIAVAIAETSTSKLADD--GIGQSIQPRKRGRPRKVLDEQQNEQENKKLP 60

Query: 61  PPP---PDVADKPPEKKAKLTGDEPPPAVVVGASKQQEQEKPKPGDGSRSRGRRKNKPRK 120
           PPP   P+V + PPEKK K T DEPPP  V   SKQ+E   PK GDGSRSRGRRKNKPRK
Sbjct: 61  PPPPLLPEVEENPPEKKIKATVDEPPPGSVKEGSKQEE---PKTGDGSRSRGRRKNKPRK 117

[Close]
BLAST of Sed0020212 vs. ExPASy TrEMBL
Match: A0A6J1KLK8 (uncharacterized protein LOC111496353 OS=Cucurbita maxima OX=3661 GN=LOC111496353 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.5e-30
Identity = 89/121 (73.55%), Postives = 98/121 (80.99%), Query Frame = 0 

Query: 1   MGKKKPHKTKHIAAAIAEASTSKSPEDAG--GGGQSAQPRKRGRPRKVLDEPPDEQGNQE 60
           MGKKK  KTK I+ AIAE STSK P+D G  GGGQS QPRKRGRPRKVLDEPPD++  + 
Sbjct: 33  MGKKKTQKTKQISVAIAETSTSKLPDDGGGHGGGQSEQPRKRGRPRKVLDEPPDDK--KL 92

Query: 61  LPPPPPDVADKPPEKKAKLTGDEPPPAVVVGASKQQEQEKPKPGDGSRSRGRRKNKPRKS 120
           LPPP  DVADKP +KK K TGDEPP + + GASKQQE E+PK GDGSRSRGRRKNKPRKS
Sbjct: 93  LPPPAADVADKPLQKKGKTTGDEPPIS-MEGASKQQESEEPKSGDGSRSRGRRKNKPRKS 150

[Close]
BLAST of Sed0020212 vs. ExPASy TrEMBL
Match: A0A5A7VIE6 (Zinc finger and BTB domain-containing protein 47 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005800 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 3.8e-26
Identity = 84/122 (68.85%), Postives = 91/122 (74.59%), Query Frame = 0 

Query: 1   MGKKKPHKTKHIAAAIAEASTSKSPEDAGGGGQSAQPRKRGRPRKVLDEPPDEQGNQELP 60
           MGKKK  KTK IA AIAE STSK  +D  G GQS QPRKRGRPRKVLDE  +EQ N++LP
Sbjct: 1   MGKKKTQKTKEIAVAIAETSTSKLADD--GIGQSIQPRKRGRPRKVLDEQQNEQENKKLP 60

Query: 61  PPP---PDVADKPPEKKAKLTGDEPPPAVVVGASKQQEQEKPKPGDGSRSRGRRKNKPRK 120
           PPP   P+V + PPEKK K T DEPPP  V   SKQ+E   PK GDGSRSRGRRKNKPRK
Sbjct: 61  PPPPLLPEVEENPPEKKIKATVDEPPPGSVKEGSKQEE---PKTGDGSRSRGRRKNKPRK 117

[Close]
BLAST of Sed0020212 vs. ExPASy TrEMBL
Match: A0A0A0LRH2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G361610 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.2e-19
Identity = 74/119 (62.18%), Postives = 86/119 (72.27%), Query Frame = 0 

Query: 1   MGKKKPHKTKHIAAAIAEASTSKSPEDAGGGGQSAQPRKRGRPRKVLDEPPDEQGNQELP 60
           MGKKK  KTK IA AIAE STSK  +D G  GQ  QPRKRGRPRKVL+E  +EQ +++ P
Sbjct: 1   MGKKKTQKTKEIAVAIAETSTSKLADD-GIIGQPIQPRKRGRPRKVLEEQQNEQESKKPP 60

Query: 61  PPPPDVADKPPEKKAKLTGDEPPPAVVVGASKQQEQEKPKPGDGSRSRGRRKNKPRKSS 120
           PP  +VA+ PPEKK K T DE     ++  SK++E   PK GDGSRSRGRRKNKPRKSS
Sbjct: 61  PPLLEVAENPPEKKIKGTVDEAALGSMIEGSKEEE---PKTGDGSRSRGRRKNKPRKSS 115

[Close]
BLAST of Sed0020212 vs. ExPASy TrEMBL
Match: A0A251R9L0 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G379600 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 4.0e-04
Identity = 57/140 (40.71%), Postives = 74/140 (52.86%), Query Frame = 0 

Query: 1   MGKKKPHKTKHIAAAIAEASTSKSPEDAGGGGQSAQPRKRGRPRKVLD--EPPDEQG--- 60
           MGKKKP KTK ++ AIAEA ++          Q   PRKRGRPRK+++  E  +EQ    
Sbjct: 1   MGKKKPQKTKELSVAIAEAPSTGDEGQQQSQPQPHTPRKRGRPRKIIEKTESTEEQSTPQ 60

Query: 61  NQELPPPPPDVADKPPEKKAKLTGD----------------EPPPAVVVGASKQQEQEKP 120
            +E      DV ++   KKAK T D                EP  A V G +K++E +  
Sbjct: 61  TEEAAAAAEDVEEQ--SKKAKATEDEDQQEEEQQEQPKIKEEPSSASVRGGAKKEEGQAR 120

[Close]
BLAST of Sed0020212 vs. ExPASy TrEMBL
Match: A0A6J5TRQ2 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS7916 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 5.3e-04
Identity = 51/141 (36.17%), Postives = 72/141 (51.06%), Query Frame = 0 

Query: 1   MGKKKPHKTKHIAAAIAEASTSKSPEDAGGGGQSAQPRKRGRPRKVLD------------ 60
           MGKKKP KTK ++ AIAEA ++          Q   PRKRGRPRK+++            
Sbjct: 1   MGKKKPQKTKELSVAIAEAPSTGDEGQQQSQPQPHTPRKRGRPRKIIEKTESTEEQSTPQ 60

Query: 61  ----------EPPDEQGNQELPPPPPDVADKPPEKKAKLTGDEPPPAVVVGASKQQEQEK 120
                     E  +EQ  +       D  +K  +++ K+  +EP  A V G +K++E + 
Sbjct: 61  TEEAAAAAAAEDVEEQSKKAKATEDEDQQEKEEQEQPKIKEEEPSSASVRGGAKKEEGQA 120

The following BLAST results are available for this feature:
BLAST of Sed0020212 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7020516.18.0e-3173.55hypothetical protein SDJN02_17201, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_023537340.13.0e-3073.55uncharacterized protein LOC111798433 [Cucurbita pepo subsp. pepo][more]
XP_023002541.15.2e-3073.55uncharacterized protein LOC111496353 [Cucurbita maxima][more]
XP_038884964.15.9e-2668.91uncharacterized protein LOC120075548 [Benincasa hispida][more]
KAA0065239.17.8e-2668.85zinc finger and BTB domain-containing protein 47 [Cucumis melo var. makuwa][more]
BLAST of Sed0020212 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sed0020212 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KLK82.5e-3073.55uncharacterized protein LOC111496353 OS=Cucurbita maxima OX=3661 GN=LOC111496353... [more]
A0A5A7VIE63.8e-2668.85Zinc finger and BTB domain-containing protein 47 OS=Cucumis melo var. makuwa OX=... [more]
A0A0A0LRH21.2e-1962.18Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G361610 PE=4 SV=1[more]
A0A251R9L04.0e-0440.71Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G379600 PE=4 SV=1[more]
A0A6J5TRQ25.3e-0436.17Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS7916 PE=4 SV... [more]
BLAST of Sed0020212 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..119
NoneNo IPR availablePANTHERPTHR37615NUCLEOPORIN NUP159-LIKEcoord: 1..119

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0020212.1Sed0020212.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane