Sed0020210 (gene) Chayote v1

Overview


Name	Sed0020210
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Flap endonuclease 1
Location	LG04: 2733774 .. 2740493 (-)
RNA-Seq Expression	Sed0020210
Synteny	Sed0020210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACGATTTAATTTTCACCCTACAATTGACACGATAAAAGACCTTAAACCGAGCTCCTTCCCGCCATTCTTGCTTCGTCTTCCTCAGCGGTTTCCCTCTCTGCAACTTCTCCCCTTTCGCACACAGCCACAACTCAACAATGGGCATTAAGGTATCTTTCTATCCTGCAATCGCTCTTCCATTCTCGCTTTTCCCTTTCACAATTTCCACATCCTTCGATTTCTTAGGGTTTAACCAAGCTTTTAGCCGATAATGCCCCCAAAGGCATGAAGGAGCAGAAGTTCGAAAGCTATTTCGGCCGCAAAATCGCAATCGACGCCAGCATGAGTATTTATCAATTTCTTGTCAGTGGCTGTTTCGCCCAATTTTCTCCGTTTTTTCCAGTTCAAAATTAGTCTCCGTATCTCATATCTATGCGTGATTTTACTGATGTAGATTGTTGTTGGAAGAAGTGGGACTGAGATGCTGACCAATGAAGCTGGTGAAGTCACTAGGTCGGCCTTTTGATTCATTTCTGCATTTTGTTTGGATTTGGAAACTTGTGAATTATCTGCCGCCCCGTTTGATAACCGTTTGGTTTTTGAAATTTAAGCTTTTGGAATGTGTTTAAAACCATCCTTCTGCTAACCAAATTTCAAAAACAAAAACTAGTTTTTGGAAGCCTATTTTTTTGTTTCCGAATTTTGAGATGTATATATCAAAGTAAGAAAGAAATGTAGTTGTTGTAGGCTTAAATTTCATAAACCTAAACCTAAAACTAAAAATAAAATGGTTATCAAACAGCCTACATGTTTTGGTTTTTGATGTATTCGATTTTTCATGTTGATTTCATGATTTGTTATGTCGAATTGTAGCCATTTGCAAGGGATGTTTAGCCGGACAATAAGGCTTCTGGAAGCTGGAATTAAGCCTGTGTAATTTTATTTCTATCCTGACATTTTTTTTATCTTGAGTTTTGTGATGAGTATTTTGTCTGATGTGGTCTTCTTTTTATGGGAATAAATGCACTCAGATATGTCTTTGATGGAAAGCCTCCTGATTTGAAAAAGCAAGAACTCGCAAAACGGTAACTAGGCGATCTCATTGTATATTGTGTATTTCGTTCTAAGGGTAATCATGGTCGTGTTTGAATCATGTTTAATCATCAATCAAGTCAAGATCTTAAGCCGGTAATTTGAGGTGAATTTAATTATTAACCCTATAAATTTAAGGCGATATGTTGAAAATTTGAAAAATGCCCAACAAGTAGAAACTAATATTAGTTGGAGAATAAACGTTTTTTCACAAAGTTTGAGCAAATGTCCTCGATAACAGGTTAAACCACTTTAAAAATCATCATTCAAACCAAAATATTAAGTTGATAGGCTGAGGTAATGTTATTATATTAACTAATAGATGGCCATGCCTTCCATGTAAATTATGTATTCAGTTATTCAAAGAGAGCAGATGCTACTGAAGATCTGGCAGATGCAATTGAGGTATTTTTGTTCTTGTGCCTTTGTGTTTTGTTCATTGTAAAGAAAATAAGACTGAATTATCTCCACCAACTGCTCATTTTGTTATTCTAGGTTGGCAACAAGGAGGATATTGAGAAATTCAGTAAAAGGACGGTGAAGGTTAGTTATCTGCTTCGACATTTTTTCTCAAGTAATGAACGTACACATTGCATTGTAAATCGATTTATATGCTCTCACTAACGATCAGTAAAGAGATTGGAGCAGCATGCAAATATTCCTGAAGTTGTTTGCTTAAAATAATCCTATGCATTAATATAATTTGTGGTTAAACTTGAAGGTTACAAAACAGCACAATGATGACTGTAAAAGACTCTTGAGACTCATGGGAGTGCCTGTGATCGAGGTGACGATACACTATACTACTGATGTTTGTTCAAGTAATTCATTGCTTCCGATGTAACATGCTTGAGTACATTGCAATTCTTTTTGGATGTTTGCAGGCTCCCTCTGAAGCCGAGTCACAATGTGCTGCGCTTTGCAAGTTAGGAAAGGCAAGCACCCATCTCCTGCATGATAATTCTTCTTTTGTTTCTTGAATGTGGACCGATGAACTAAGAATCGAGGGGAAAATTCTTTGAAAAAAAAAGAAACAGAACACACTTATTAGTTATTCCTCACATGCCTATTTGCGACAATATTCTGGGATCACACTTTTGGTTTTTGACTGGACGTGCTGCCAATTGATATAAGGTGTCACTGTCTCTCACTCTCGTGGGCCACCCCTCTAATTTGATGAAGAATAGGGGGCTAGAATTCCAGTTGATATGCGTTCTGTTGTCATTGACTGCAGCCTTTTTCTTGAATATCCCTCCTTTACATTCTAAGGAGTCTTAGATTTCTTGGTCTCTTTAGTTCACTTTGTTGGGGGTTTGATGGTTGCTGGCCATTTTCTTGTCGTTTCTCACGGTTTTCTGGCAATTGTTTGCTCGTGCTTGAAAAAAAGCTCCGTTATATTGAGTTGTGTTCTTTGGTCCTAATTTAGTGGATGGTCTTTGGTGTTTAGAAGGTTGTGTGTGGCTGGTCTTTTGTGATTTTATTCGGTCGGTGACTTCCTTTTTTTATATTATTTGGTTTGTGCTTTGAGGGGCTCAAATTTTGAATTCTCTGTTTAATTTTTTGATACAAGAAAGACTGGTGAGTGGATTCGGTGTAAGTGTGTCTTGTTCTTCATGAAGAAGGTGGACCATGCTAGAGATTCATGATTTTTTGTGTGCAGTTGGCCAGTCCACTTCCTCTCTTTAACCTCTTGAAATCTCAATTTTTATCCGCAAGGCTGTTATTTCCTTTCACGGTACCGTATCGGTTGGTTGTTGCTTGTGGGGGATTTTTGATGGAACACTCAGATTGTTTACATTGTTCCATTATTTTCCTACTTTGTCTTTTGTTCTGGTTTCATATTTTTTTTTGGTTTTCACTTTTTTTCTTGTATGTTTTCTATTTGCTTTTTTTTGTCTTCCTTCCTTTGTGGTGGGGCTTGTATACCCAAGAAATGGCCTCTTTTCATCTACCAATGTAAGGTATTGATATATCTATCAAAAGTAATATTTCTTGTTTAAACAAAATTAAAAATAGAGGACTTCTTGTTGGTATATTTCAGGTTTATGCTGTAGCATCTGAAGATATGGATTCACTAACATTTGGATCTCCCAGATTTCTTCGTCATTTAATGGATCCCAGCTCAAGGAAGATCCCAGTCATGGAATTTGAAGTTGCGAAGGTGATATGTCTCCATCTTAGTTTTGGCCATTTACCTATTGTATCATTTACCAAATAATTTGTTTTATTTCAGATTTTGGAGGAGCTGAACCTTACCATGGATCAATTTGTTGATTTGTGCATTCTTTCTGGATGTGATTATTGTGACAGTATCCGAGGTATTTGGATTCGATATAATAGTAATAGTATATATGTTTTATTGTCCTCCTACTGATGTTGATGTTCAAATTTTGTCAGTGTTGTTCCAGTTTTATGTATTCTAAATGTAGAGCCCCCTTTTGCATTTACTCCACAGGTATAGGGGGGCAGACTGCTCTAAAGCTTATCCGTCAACATGGGCAGATAGAAAATATACTAGAGAACATAAATAAAGAAAGGTAACCTATTTTTGGAATCAAAATATATATACATATATCTATATATGTATATATATTTTTTAGTATTTCTAGAAGATTAAGGAACTAACTAACTATTACAAAATTACCCTAATAGCCCCTAATATCCTTGCATCAAATTGCTCTGGCCATAGTTGAATTCTTTTTTCGAACCAAGTTTGGTGTGGATAGACAATGGTTTATATTGTTGACGTGGCAAGTTACAAAGGAACAACTAAATGCTAGTGTGTACTCAACATGCAAGATTCTTACAGTTTTCATGTTATTGATGCTTCTTGTTTCTCTTATTATTATTATTATTATTATTGTTATTATTATTATTATGTTGTAAACTACAGGTACCAAATTCCAGAGGATTGGCCTTATCAAGAGGCCCGACAACTTTTTAAAGAACCACTAGTGTGTACTGACGAAGAGCAACTCGACATAAAGTGGACTACTCCAGATGAAGAAGTAACTTAACTTTTTTGGTTTAAAAGTCTTCTCATAAATCTTTTCTTTCTTCATTTTATGTGTGCGCAAGCGCACACATACAAACATATTATGAAGTTGTGATCTCATATATTATCCAAAAGATATTGAAGTTTTGATCTCTCTTGCTCTTAATATGGCATTAAAGTTGCTTAGAGACGGGCGTGGTTATCCTTGTTTAAAAAAAACATGGTATTGAAGTTGTATTCTCATATCTATTTCAGGGCTTAATATCATTTTTGGTGAATGAGAATGGGTTCAACAGCGATAGAGTGACAAAGGTTTATCCTCTCAATAATCTTAATTGTTATATCAGTTTTTTTAATGAAAGTCATTTAACCTTCCTCAAAGTTTATGCCTCTTTCGCTATTTTTTTTAAAAAAATTTCACCAGGCAGTAGAAAAAATTAAAGCAGCCAAGAACAAGTCATCACAGGGCAGGTAAGTGTTGGCTATGTAATTTCATCAAATTTTTAATGATAAAAATTCTCACCTCTTTGGTCAATCGTTCTGTTTATTTCTCCTTTTCAGATTGGAGTCATTTTTCAAGCCTGTAAGCAATCCTTCAGCATCCGTTAAGAGAAAGGTATATCGTTAACTATCTACTTATGTCTTATTTTATCTGAGGTCAGGATTGGTGAAATTTAACTTCCATCGATATTTCTAATTAGCGTATTTAACTTTGAATTTTAGAACATCAACAATATTTTAATGGCCTATGACAGTAACATATAAAATACATCTGTAAAATTTCCTTCAGTTTTAATTTGTTGTTTTTTAATTTACTTTTTTTTTTTGTACTGAAATTCAATTATGTTGATCTTCAATATCTTCACTTGTGTTAGTGTTGACTATTGACTGCAATTTTATGTTCCACCGTCTATTTTACTTGTCCAAGAGTACTTGCCTTTTTCTGTCTATTTTACTTCAGAATCTCCATTTCTCTCTTTGATCTCAAATTACCTGCAAAATCCATTAAACGAGAAGCACTACAGAAATTCTTTTGATCAAGTTCTATAAAGAACTGGTGGGATATAGAGACCTAATTGTCTCTACCTTACTATACTGAATGACAGGTAAACAAATGTGTTCTTAGGTCTCCAAAACCAGGAATCCAGCATAAGTACTCTCCACAAGCTTTTTATTCGCCAAGGACAAAGGTCACTGGCAGCCTAGGCAAGCCAATGTTAGACCATTCTTCCAAGTTCTCGGGGCCGGGGCCATTAGTTATGGCTGTTTGCTTCTGCACATGAAGCTGAAAACCCTGGTGAAATTTTTAGAGTGAATAACTAATCTATGTAGCTGAAGTAATTACACCTGGTGCTTATGTAGTTGCTTGTCTTTTTAGAGAAGTGTTTGAAAATTAGTCCCCAAGGAGTGGTACAGTGATCGAAGACTTGGGTTTTGAAGCTATGCTCTCCTCAAGGACTTGGAATCACTTGTGACATTACTCCTTCGATGTCTCTGGTATCTGTCCTAGGGACGGGCGTGGTTATTCTTGTTTCAAAAAAAGAAGTGCTTGAAAATTCTCATCATCGAATCTTTTGAACCTTATTGTACCACTTCAAATCAATTAAAGAGCTCAAGGTGCTTGATTTGTCCGAGGCCTGGTTAATTAAAACCCACCCTGTTTCACTTTTATATTAAAAAGTTGTTCATGTAGAAGCAGTTTTAAGGCGTTCTGCCTGTAGTTTGCAAGATGGGACATGCAGGGAGATGATTGGATTTTGTTTTTTTTTCTTTATTTTCGTGAGTGTCTGGGTCAATTTATGTGCACCTCAATATTTTCACGAGACATACCCGCCTGTTGCATGACCTTACAGTATTTGGAATGTCAAGAAAATCTATAGAAAATTAATTATTTGGTAGGGCGCTATCATGAATTAAACCTATCACCTCTTAGTTCTCCAAAATCTTCTTGACCACTAAGGCATGTCATGATGGTTTTGTTAGTTAGTTTGACCGGTGGGAAGATCTTCGGACAATATTTGAGCCCTTGTTAGATTTCATATTCTCTTTTGAGGCTTAGTTACTAAATCTTTTTGTAATTACCATCTAAAAGTTATTTTTCTAGATTTGATCCCTTTTTATAGGTGGTCTCCCTAATTTAATTGGACTGTTTTTTTTGGTATGTCCTTTGTATATTCTCAAATGAAAGCTTGGTTGATTCTAATAAAATATATCTTTTGCATTGTGGTGCCACATTTTTCTTACAACTAATGACCAGTAACTAAAGTTGGGATTATTTGTAATCCAACAGGAGACGTCAGAAAAGCCAACCAAACAAGCAGCAACCAAGAAATCAAAGTCGGGTGGTGGTAAACGAAAGTAGATGAGTTGGCCGCTGTCGAATTTGTCTACCGAACCTGATATGTTAAGTAATTTAAGAAAAGCTTTCTTTGCCTGCAATTTTAGGAGATAGTTGCACGTTGTGGGGCAAGAACTTTCTTGTATCGATTTGAACTGGTGCAATATTAGGACGTAGATCTTCGAGTATTTGCAGACGTGCCTTGTTTAACTACAATCAAGTTATTCTAAGTTAAATCCCCTCTAAACAATGAAAGATTTTGTTGCTGCTTTTCTGACATATACGTTTTAAAAGTGTTTGTTCCCAAGAGCTGGC

mRNA sequence

GACGATTTAATTTTCACCCTACAATTGACACGATAAAAGACCTTAAACCGAGCTCCTTCCCGCCATTCTTGCTTCGTCTTCCTCAGCGGTTTCCCTCTCTGCAACTTCTCCCCTTTCGCACACAGCCACAACTCAACAATGGGCATTAAGGGTTTAACCAAGCTTTTAGCCGATAATGCCCCCAAAGGCATGAAGGAGCAGAAGTTCGAAAGCTATTTCGGCCGCAAAATCGCAATCGACGCCAGCATGAGTATTTATCAATTTCTTATTGTTGTTGGAAGAAGTGGGACTGAGATGCTGACCAATGAAGCTGGTGAAGTCACTAGCCATTTGCAAGGGATGTTTAGCCGGACAATAAGGCTTCTGGAAGCTGGAATTAAGCCTGTATATGTCTTTGATGGAAAGCCTCCTGATTTGAAAAAGCAAGAACTCGCAAAACGTTATTCAAAGAGAGCAGATGCTACTGAAGATCTGGCAGATGCAATTGAGGTTGGCAACAAGGAGGATATTGAGAAATTCAGTAAAAGGACGGTGAAGGTTACAAAACAGCACAATGATGACTGTAAAAGACTCTTGAGACTCATGGGAGTGCCTGTGATCGAGGCTCCCTCTGAAGCCGAGTCACAATGTGCTGCGCTTTGCAAGTTAGGAAAGGTTTATGCTGTAGCATCTGAAGATATGGATTCACTAACATTTGGATCTCCCAGATTTCTTCGTCATTTAATGGATCCCAGCTCAAGGAAGATCCCAGTCATGGAATTTGAAGTTGCGAAGATTTTGGAGGAGCTGAACCTTACCATGGATCAATTTGTTGATTTGTGCATTCTTTCTGGATGTGATTATTGTGACAGTATCCGAGGTATAGGGGGGCAGACTGCTCTAAAGCTTATCCGTCAACATGGGCAGATAGAAAATATACTAGAGAACATAAATAAAGAAAGGTACCAAATTCCAGAGGATTGGCCTTATCAAGAGGCCCGACAACTTTTTAAAGAACCACTAGTGTGTACTGACGAAGAGCAACTCGACATAAAGTGGACTACTCCAGATGAAGAAGGCTTAATATCATTTTTGGTGAATGAGAATGGGTTCAACAGCGATAGAGTGACAAAGGCAGTAGAAAAAATTAAAGCAGCCAAGAACAAGTCATCACAGGGCAGATTGGAGTCATTTTTCAAGCCTGTAAGCAATCCTTCAGCATCCGTTAAGAGAAAGGAGACGTCAGAAAAGCCAACCAAACAAGCAGCAACCAAGAAATCAAAGTCGGGTGGTGGTAAACGAAAGTAGATGAGTTGGCCGCTGTCGAATTTGTCTACCGAACCTGATATGTTAAGTAATTTAAGAAAAGCTTTCTTTGCCTGCAATTTTAGGAGATAGTTGCACGTTGTGGGGCAAGAACTTTCTTGTATCGATTTGAACTGGTGCAATATTAGGACGTAGATCTTCGAGTATTTGCAGACGTGCCTTGTTTAACTACAATCAAGTTATTCTAAGTTAAATCCCCTCTAAACAATGAAAGATTTTGTTGCTGCTTTTCTGACATATACGTTTTAAAAGTGTTTGTTCCCAAGAGCTGGC

Coding sequence (CDS)

ATGGGCATTAAGGGTTTAACCAAGCTTTTAGCCGATAATGCCCCCAAAGGCATGAAGGAGCAGAAGTTCGAAAGCTATTTCGGCCGCAAAATCGCAATCGACGCCAGCATGAGTATTTATCAATTTCTTATTGTTGTTGGAAGAAGTGGGACTGAGATGCTGACCAATGAAGCTGGTGAAGTCACTAGCCATTTGCAAGGGATGTTTAGCCGGACAATAAGGCTTCTGGAAGCTGGAATTAAGCCTGTATATGTCTTTGATGGAAAGCCTCCTGATTTGAAAAAGCAAGAACTCGCAAAACGTTATTCAAAGAGAGCAGATGCTACTGAAGATCTGGCAGATGCAATTGAGGTTGGCAACAAGGAGGATATTGAGAAATTCAGTAAAAGGACGGTGAAGGTTACAAAACAGCACAATGATGACTGTAAAAGACTCTTGAGACTCATGGGAGTGCCTGTGATCGAGGCTCCCTCTGAAGCCGAGTCACAATGTGCTGCGCTTTGCAAGTTAGGAAAGGTTTATGCTGTAGCATCTGAAGATATGGATTCACTAACATTTGGATCTCCCAGATTTCTTCGTCATTTAATGGATCCCAGCTCAAGGAAGATCCCAGTCATGGAATTTGAAGTTGCGAAGATTTTGGAGGAGCTGAACCTTACCATGGATCAATTTGTTGATTTGTGCATTCTTTCTGGATGTGATTATTGTGACAGTATCCGAGGTATAGGGGGGCAGACTGCTCTAAAGCTTATCCGTCAACATGGGCAGATAGAAAATATACTAGAGAACATAAATAAAGAAAGGTACCAAATTCCAGAGGATTGGCCTTATCAAGAGGCCCGACAACTTTTTAAAGAACCACTAGTGTGTACTGACGAAGAGCAACTCGACATAAAGTGGACTACTCCAGATGAAGAAGGCTTAATATCATTTTTGGTGAATGAGAATGGGTTCAACAGCGATAGAGTGACAAAGGCAGTAGAAAAAATTAAAGCAGCCAAGAACAAGTCATCACAGGGCAGATTGGAGTCATTTTTCAAGCCTGTAAGCAATCCTTCAGCATCCGTTAAGAGAAAGGAGACGTCAGAAAAGCCAACCAAACAAGCAGCAACCAAGAAATCAAAGTCGGGTGGTGGTAAACGAAAGTAG

Protein sequence

MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFSRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKRADATEDLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAESQCAALCKLGKVYAVASEDMDSLTFGSPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIRGIGGQTALKLIRQHGQIENILENINKERYQIPEDWPYQEARQLFKEPLVCTDEEQLDIKWTTPDEEGLISFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVSNPSASVKRKETSEKPTKQAATKKSKSGGGKRK

Homology

[Close]

BLAST of Sed0020210 vs. NCBI nr
Match: KAG6588523.1 (Flap endonuclease 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 725.7 bits (1872), Expect = 2.1e-205
Identity = 369/382 (96.60%), Postives = 375/382 (98.17%), Query Frame = 0


Query: 1   MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 60
           MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE
Sbjct: 1   MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 60

Query: 61  VTSHLQGMFSRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKRADATEDLADAIEVGN 120
           VTSHLQGMF+RTIRLLEAG+KPVYVFDGKPPDLKKQELAKRYSKRADAT DLADAIEVGN
Sbjct: 61  VTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAKRYSKRADATADLADAIEVGN 120

Query: 121 KEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAESQCAALCKLGKVYAVASED 180
           KEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAE+QCAALCKLGKVYAVASED
Sbjct: 121 KEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGKVYAVASED 180

Query: 181 MDSLTFGSPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIR 240
           MDSLTFGSPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIR
Sbjct: 181 MDSLTFGSPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIR 240

Query: 241 GIGGQTALKLIRQHGQIENILENINKERYQIPEDWPYQEARQLFKEPLVCTDEEQLDIKW 300
           GIGGQTALKLIRQHG IENILENINKERYQIPE WP+QEARQLFKEPLVCTDEEQLDIKW
Sbjct: 241 GIGGQTALKLIRQHGSIENILENINKERYQIPEGWPFQEARQLFKEPLVCTDEEQLDIKW 300

Query: 301 TTPDEEGLISFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVSNPSASVKRKE 360
           TTPDEEGLISFLVNENGFNSDRVTKAVEKIKAAKNKSSQGR+ESFFKPV+NPS S KRKE
Sbjct: 301 TTPDEEGLISFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRMESFFKPVTNPSVSTKRKE 360

Query: 361 TSEKPTKQAATKKSKSGGGKRK 383
           TSEKPTKQA TKKSKS GGKRK
Sbjct: 361 TSEKPTKQAITKKSKSSGGKRK 382

[Close]

BLAST of Sed0020210 vs. NCBI nr
Match: XP_022969706.1 (flap endonuclease 1 isoform X2 [Cucurbita maxima])

HSP 1 Score: 724.9 bits (1870), Expect = 3.5e-205
Identity = 368/382 (96.34%), Postives = 375/382 (98.17%), Query Frame = 0


Query: 1   MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 60
           MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE
Sbjct: 1   MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 60

Query: 61  VTSHLQGMFSRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKRADATEDLADAIEVGN 120
           VTSHLQGMF+RTIRLLEAG+KPVYVFDGKPPDLKKQELAKRYSKRADAT DLADAIEVGN
Sbjct: 61  VTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAKRYSKRADATADLADAIEVGN 120

Query: 121 KEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAESQCAALCKLGKVYAVASED 180
           KEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAE+QCAALCKLGKVYAVASED
Sbjct: 121 KEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGKVYAVASED 180

Query: 181 MDSLTFGSPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIR 240
           MDSLTFGSPRFLRHLMDPSSRKIPVMEFEV+KILEELNLTMDQFVDLCILSGCDYCDSIR
Sbjct: 181 MDSLTFGSPRFLRHLMDPSSRKIPVMEFEVSKILEELNLTMDQFVDLCILSGCDYCDSIR 240

Query: 241 GIGGQTALKLIRQHGQIENILENINKERYQIPEDWPYQEARQLFKEPLVCTDEEQLDIKW 300
           GIGGQTALKLIRQHG IENILENINKERYQIPEDWP+QEARQLFKEPLVCTDEEQLDIKW
Sbjct: 241 GIGGQTALKLIRQHGSIENILENINKERYQIPEDWPFQEARQLFKEPLVCTDEEQLDIKW 300

Query: 301 TTPDEEGLISFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVSNPSASVKRKE 360
           TTPDEEGLIS LVNENGFNSDRVTKAVEKIKAAKNKSSQGR+ESFFKPV+NPS S KRKE
Sbjct: 301 TTPDEEGLISLLVNENGFNSDRVTKAVEKIKAAKNKSSQGRMESFFKPVTNPSVSTKRKE 360

Query: 361 TSEKPTKQAATKKSKSGGGKRK 383
           TSEKPTKQA TKKSKS GGKRK
Sbjct: 361 TSEKPTKQAITKKSKSSGGKRK 382

[Close]

BLAST of Sed0020210 vs. NCBI nr
Match: XP_023531872.1 (flap endonuclease 1 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 723.8 bits (1867), Expect = 7.9e-205
Identity = 368/382 (96.34%), Postives = 375/382 (98.17%), Query Frame = 0


Query: 1   MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 60
           MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE
Sbjct: 1   MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 60

Query: 61  VTSHLQGMFSRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKRADATEDLADAIEVGN 120
           VTSHLQGMF+RTIRLLEAG+KPVYVFDGKPPDLKKQELAKRYSKRADAT DLADAIEVGN
Sbjct: 61  VTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAKRYSKRADATADLADAIEVGN 120

Query: 121 KEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAESQCAALCKLGKVYAVASED 180
           KEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAE+QCAALCKLGKVYAVASED
Sbjct: 121 KEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGKVYAVASED 180

Query: 181 MDSLTFGSPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIR 240
           MDSLTFGSPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIR
Sbjct: 181 MDSLTFGSPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIR 240

Query: 241 GIGGQTALKLIRQHGQIENILENINKERYQIPEDWPYQEARQLFKEPLVCTDEEQLDIKW 300
           GIGGQTALKLIRQHG IE+ILENINKERYQIPE WP+QEARQLFKEPLVCTDEEQLDIKW
Sbjct: 241 GIGGQTALKLIRQHGSIESILENINKERYQIPEGWPFQEARQLFKEPLVCTDEEQLDIKW 300

Query: 301 TTPDEEGLISFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVSNPSASVKRKE 360
           TTPDEEGLISFLVNENGFNSDRVTKAVEKIKAAKNKSSQGR+ESFFKPV+NPS S KRKE
Sbjct: 301 TTPDEEGLISFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRMESFFKPVTNPSVSTKRKE 360

Query: 361 TSEKPTKQAATKKSKSGGGKRK 383
           TSEKPTKQA TKKSKS GGKRK
Sbjct: 361 TSEKPTKQAITKKSKSSGGKRK 382

[Close]

BLAST of Sed0020210 vs. NCBI nr
Match: XP_022931726.1 (flap endonuclease 1 isoform X2 [Cucurbita moschata])

HSP 1 Score: 722.6 bits (1864), Expect = 1.8e-204
Identity = 368/382 (96.34%), Postives = 374/382 (97.91%), Query Frame = 0


Query: 1   MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 60
           MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE
Sbjct: 1   MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 60

Query: 61  VTSHLQGMFSRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKRADATEDLADAIEVGN 120
           VTSHLQGMF+RTIRLLEAG+KPVYVFDGKPPDLKKQELAKRYSKRADAT DLADAIEVGN
Sbjct: 61  VTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAKRYSKRADATADLADAIEVGN 120

Query: 121 KEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAESQCAALCKLGKVYAVASED 180
           KEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAE+QCAALCKLGKVYAVASED
Sbjct: 121 KEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGKVYAVASED 180

Query: 181 MDSLTFGSPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIR 240
           MDSLTFGSPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIR
Sbjct: 181 MDSLTFGSPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIR 240

Query: 241 GIGGQTALKLIRQHGQIENILENINKERYQIPEDWPYQEARQLFKEPLVCTDEEQLDIKW 300
           GIGGQTALKLIRQHG IENILENINKERYQIPE WP+QEARQLFKEPLVCTDEEQLDIKW
Sbjct: 241 GIGGQTALKLIRQHGSIENILENINKERYQIPEGWPFQEARQLFKEPLVCTDEEQLDIKW 300

Query: 301 TTPDEEGLISFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVSNPSASVKRKE 360
           TTPDEEGLISFLVNENGFNSDRVTKAVEKIKAAKNKSSQGR+ESFFKPV+NPS S KRKE
Sbjct: 301 TTPDEEGLISFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRMESFFKPVTNPSVSTKRKE 360

Query: 361 TSEKPTKQAATKKSKSGGGKRK 383
           TSEKPTKQA TKKSKS GGK K
Sbjct: 361 TSEKPTKQAITKKSKSSGGKIK 382

[Close]

BLAST of Sed0020210 vs. NCBI nr
Match: XP_038879462.1 (flap endonuclease 1 isoform X2 [Benincasa hispida])

HSP 1 Score: 721.8 bits (1862), Expect = 3.0e-204
Identity = 364/382 (95.29%), Postives = 376/382 (98.43%), Query Frame = 0


Query: 1   MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 60
           MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGR+GTEMLTNEAGE
Sbjct: 1   MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRTGTEMLTNEAGE 60

Query: 61  VTSHLQGMFSRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKRADATEDLADAIEVGN 120
           VTSHLQGMF+RTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKRADAT DLADAIEVGN
Sbjct: 61  VTSHLQGMFNRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKRADATTDLADAIEVGN 120

Query: 121 KEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAESQCAALCKLGKVYAVASED 180
           KEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAE+QCAALCKLGKVYAVASED
Sbjct: 121 KEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGKVYAVASED 180

Query: 181 MDSLTFGSPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIR 240
           MDSLTFGSPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQF+DLCILSGCDYCD+IR
Sbjct: 181 MDSLTFGSPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSGCDYCDNIR 240

Query: 241 GIGGQTALKLIRQHGQIENILENINKERYQIPEDWPYQEARQLFKEPLVCTDEEQLDIKW 300
           GIGGQTALKLIRQHG IE ILENINKERYQIP+DWPYQEARQLFKEPLVCTDEEQLDIKW
Sbjct: 241 GIGGQTALKLIRQHGSIETILENINKERYQIPDDWPYQEARQLFKEPLVCTDEEQLDIKW 300

Query: 301 TTPDEEGLISFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVSNPSASVKRKE 360
           TTPDEEGL++FLVNENGFNS+RVTKAVEKIKAAKNKSSQGR+ESFFKPV+NPS S+KRKE
Sbjct: 301 TTPDEEGLLAFLVNENGFNSERVTKAVEKIKAAKNKSSQGRMESFFKPVTNPSVSIKRKE 360

Query: 361 TSEKPTKQAATKKSKSGGGKRK 383
           TSEKPTKQA TKKSKS GGKRK
Sbjct: 361 TSEKPTKQAITKKSKSSGGKRK 382

[Close]

BLAST of Sed0020210 vs. ExPASy Swiss-Prot
Match: C6TEX6 (Flap endonuclease 1 OS=Glycine max OX=3847 GN=FEN1 PE=2 SV=1)

HSP 1 Score: 661.8 bits (1706), Expect = 4.8e-189
Identity = 331/382 (86.65%), Postives = 358/382 (93.72%), Query Frame = 0


Query: 1   MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 60
           MGIKGLTKLLADNAPK MKE KFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE
Sbjct: 1   MGIKGLTKLLADNAPKSMKENKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 60

Query: 61  VTSHLQGMFSRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKRADATEDLADAIEVGN 120
           VTSHLQGMFSRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKRA+ATEDL++A+E  N
Sbjct: 61  VTSHLQGMFSRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKRAEATEDLSEALETAN 120

Query: 121 KEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAESQCAALCKLGKVYAVASED 180
           KEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPV+EAPSEAE+QCAALCK GKVY V SED
Sbjct: 121 KEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVVEAPSEAEAQCAALCKAGKVYGVVSED 180

Query: 181 MDSLTFGSPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIR 240
           MDSLTFG+P+FLRHLMDPSS+KIPVMEFEVAKILEELN+TMDQF+DLCILSGCDYCDSIR
Sbjct: 181 MDSLTFGAPKFLRHLMDPSSKKIPVMEFEVAKILEELNMTMDQFIDLCILSGCDYCDSIR 240

Query: 241 GIGGQTALKLIRQHGQIENILENINKERYQIPEDWPYQEARQLFKEPLVCTDEEQLDIKW 300
           GIGG TALKLIRQHG IENI EN+NKERYQIP++WPYQEAR+LFKEPLV TDE++LDIKW
Sbjct: 241 GIGGLTALKLIRQHGSIENIPENLNKERYQIPDNWPYQEARRLFKEPLVITDEKELDIKW 300

Query: 301 TTPDEEGLISFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVSNPSASVKRKE 360
           ++PDEEGLI+FLVNENGFN DRVTKA+EKIK AKNKSSQGRLESFFKP +NPS  +KRKE
Sbjct: 301 SSPDEEGLITFLVNENGFNRDRVTKAIEKIKVAKNKSSQGRLESFFKPTANPSVPIKRKE 360

Query: 361 TSEKPTKQAATKKSKSGGGKRK 383
           T     K+   KK+K+GGGK+K
Sbjct: 361 TPVNNAKE-TNKKTKAGGGKKK 381

[Close]

BLAST of Sed0020210 vs. ExPASy Swiss-Prot
Match: O65251 (Flap endonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=FEN1 PE=3 SV=2)

HSP 1 Score: 656.8 bits (1693), Expect = 1.5e-187
Identity = 330/382 (86.39%), Postives = 352/382 (92.15%), Query Frame = 0


Query: 1   MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 60
           MGIKGLTKLLADNAP  MKEQKFESYFGRKIA+DASMSIYQFLIVVGR+GTEMLTNEAGE
Sbjct: 1   MGIKGLTKLLADNAPSCMKEQKFESYFGRKIAVDASMSIYQFLIVVGRTGTEMLTNEAGE 60

Query: 61  VTSHLQGMFSRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKRADATEDLADAIEVGN 120
           VTSHLQGMF+RTIRLLEAGIKPVYVFDGKPP+LK+QELAKRYSKRADAT DL  AIE GN
Sbjct: 61  VTSHLQGMFNRTIRLLEAGIKPVYVFDGKPPELKRQELAKRYSKRADATADLTGAIEAGN 120

Query: 121 KEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAESQCAALCKLGKVYAVASED 180
           KEDIEK+SKRTVKVTKQHNDDCKRLLRLMGVPV+EA SEAE+QCAALCK GKVY VASED
Sbjct: 121 KEDIEKYSKRTVKVTKQHNDDCKRLLRLMGVPVVEATSEAEAQCAALCKSGKVYGVASED 180

Query: 181 MDSLTFGSPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIR 240
           MDSLTFG+P+FLRHLMDPSSRKIPVMEFEVAKILEEL LTMDQF+DLCILSGCDYCDSIR
Sbjct: 181 MDSLTFGAPKFLRHLMDPSSRKIPVMEFEVAKILEELQLTMDQFIDLCILSGCDYCDSIR 240

Query: 241 GIGGQTALKLIRQHGQIENILENINKERYQIPEDWPYQEARQLFKEPLVCTDEEQLDIKW 300
           GIGGQTALKLIRQHG IE ILEN+NKERYQIPE+WPY EAR+LFKEP V TDEEQLDIKW
Sbjct: 241 GIGGQTALKLIRQHGSIETILENLNKERYQIPEEWPYNEARKLFKEPDVITDEEQLDIKW 300

Query: 301 TTPDEEGLISFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVSNPSASVKRKE 360
           T+PDEEG++ FLVNENGFN DRVTKA+EKIK AKNKSSQGRLESFFKPV+N S   KRKE
Sbjct: 301 TSPDEEGIVQFLVNENGFNIDRVTKAIEKIKTAKNKSSQGRLESFFKPVANSSVPAKRKE 360

Query: 361 TSEKPTKQAATKKSKSGGGKRK 383
             E  TK AA KK+K  GG++K
Sbjct: 361 IPESTTKGAANKKTKGAGGRKK 382

[Close]

BLAST of Sed0020210 vs. ExPASy Swiss-Prot
Match: B4FHY0 (Flap endonuclease 1 OS=Zea mays OX=4577 GN=FEN1 PE=2 SV=1)

HSP 1 Score: 625.9 bits (1613), Expect = 2.9e-178
Identity = 314/381 (82.41%), Postives = 350/381 (91.86%), Query Frame = 0


Query: 1   MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 60
           MGIKGLTKLLADNAPK MKEQKFESYFGRKIA+DASMSIYQFLIVVGR+G E LTNEAGE
Sbjct: 1   MGIKGLTKLLADNAPKAMKEQKFESYFGRKIAVDASMSIYQFLIVVGRTGMETLTNEAGE 60

Query: 61  VTSHLQGMFSRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKRADATEDLADAIEVGN 120
           VTSHLQGMF+RTIRLLEAGIKPVYVFDGKPPD+KKQELAKRYSKR DAT+DL +A+EVG+
Sbjct: 61  VTSHLQGMFNRTIRLLEAGIKPVYVFDGKPPDMKKQELAKRYSKRDDATKDLTEAVEVGD 120

Query: 121 KEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAESQCAALCKLGKVYAVASED 180
           K+ IEK SKRTVKVT+QHN+DCKRLLRLMGVPV+EAPSEAE++CAALC   KV+AVASED
Sbjct: 121 KDAIEKLSKRTVKVTRQHNEDCKRLLRLMGVPVVEAPSEAEAECAALCINDKVFAVASED 180

Query: 181 MDSLTFGSPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIR 240
           MDSLTFG+PRFLRHLMDPSS+KIPVMEF+VAK+LEEL LTMDQF+DLCIL GCDYCDSI+
Sbjct: 181 MDSLTFGAPRFLRHLMDPSSKKIPVMEFDVAKVLEELELTMDQFIDLCILCGCDYCDSIK 240

Query: 241 GIGGQTALKLIRQHGQIENILENINKERYQIPEDWPYQEARQLFKEPLVCTDEEQLDIKW 300
           GIGGQTALKLIRQHG IE+ILEN+NK+RYQIPEDWPYQEAR+LFKEP V  D  +L  KW
Sbjct: 241 GIGGQTALKLIRQHGSIESILENLNKDRYQIPEDWPYQEARRLFKEPNVTLDIPEL--KW 300

Query: 301 TTPDEEGLISFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVSNPSASVKRKE 360
           T PDEEGLISFLV +NGFN DRVTKA+EKIK+AKNKSSQGRLESFFKP +  SA +KRKE
Sbjct: 301 TAPDEEGLISFLVKDNGFNEDRVTKAIEKIKSAKNKSSQGRLESFFKPTATTSAPLKRKE 360

Query: 361 TSEKPTKQAATKKSKSGGGKR 382
           TS+K +K AA KK+K+GG K+
Sbjct: 361 TSDKTSKAAANKKTKAGGKKK 379

[Close]

BLAST of Sed0020210 vs. ExPASy Swiss-Prot
Match: B8AW67 (Flap endonuclease 1-A OS=Oryza sativa subsp. indica OX=39946 GN=FEN1a PE=3 SV=1)

HSP 1 Score: 625.2 bits (1611), Expect = 5.0e-178
Identity = 315/382 (82.46%), Postives = 346/382 (90.58%), Query Frame = 0


Query: 1   MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 60
           MGIKGLTKLLADNAPK MKEQKFESYFGR+IA+DASMSIYQFLIVVGR+G E LTNEAGE
Sbjct: 1   MGIKGLTKLLADNAPKAMKEQKFESYFGRRIAVDASMSIYQFLIVVGRTGMETLTNEAGE 60

Query: 61  VTSHLQGMFSRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKRADATEDLADAIEVGN 120
           VTSHLQGMF+RTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKR DAT++L +A+E G+
Sbjct: 61  VTSHLQGMFNRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKREDATKELTEAVEEGD 120

Query: 121 KEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAESQCAALCKLGKVYAVASED 180
           K+ IEKFSKRTVKVTKQHN++CKRLLRLMGVPV+EAP EAE++CAALC    VYAVASED
Sbjct: 121 KDAIEKFSKRTVKVTKQHNEECKRLLRLMGVPVVEAPCEAEAECAALCINDMVYAVASED 180

Query: 181 MDSLTFGSPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIR 240
           MDSLTFG+PRFLRHLMDPSS+KIPVMEFEVAK+LEEL LTMDQF+DLCILSGCDYCDSI+
Sbjct: 181 MDSLTFGAPRFLRHLMDPSSKKIPVMEFEVAKVLEELELTMDQFIDLCILSGCDYCDSIK 240

Query: 241 GIGGQTALKLIRQHGQIENILENINKERYQIPEDWPYQEARQLFKEPLVCTDEEQLDIKW 300
           GIGGQTALKLIRQHG IE+ILENINK+RYQIPEDWPYQEAR+LFKEP V  D  +L  KW
Sbjct: 241 GIGGQTALKLIRQHGSIESILENINKDRYQIPEDWPYQEARRLFKEPNVTLDIPEL--KW 300

Query: 301 TTPDEEGLISFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVSNPSASVKRKE 360
             PDEEGL+ FLV ENGFN DRVTKA+EKIK AKNKSSQGRLESFFKPV + S  +KRK+
Sbjct: 301 NAPDEEGLVQFLVKENGFNQDRVTKAIEKIKFAKNKSSQGRLESFFKPVVSTSVPLKRKD 360

Query: 361 TSEKPTKQAATKKSKSGGGKRK 383
           TSEKPTK  A KK+K  GGK+K
Sbjct: 361 TSEKPTKAVANKKTKGAGGKKK 380

[Close]

BLAST of Sed0020210 vs. ExPASy Swiss-Prot
Match: Q9SXQ6 (Flap endonuclease 1-A OS=Oryza sativa subsp. japonica OX=39947 GN=FEN1A PE=1 SV=1)

HSP 1 Score: 625.2 bits (1611), Expect = 5.0e-178
Identity = 315/382 (82.46%), Postives = 346/382 (90.58%), Query Frame = 0


Query: 1   MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 60
           MGIKGLTKLLADNAPK MKEQKFESYFGR+IA+DASMSIYQFLIVVGR+G E LTNEAGE
Sbjct: 1   MGIKGLTKLLADNAPKAMKEQKFESYFGRRIAVDASMSIYQFLIVVGRTGMETLTNEAGE 60

Query: 61  VTSHLQGMFSRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKRADATEDLADAIEVGN 120
           VTSHLQGMF+RTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKR DAT++L +A+E G+
Sbjct: 61  VTSHLQGMFNRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKREDATKELTEAVEEGD 120

Query: 121 KEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAESQCAALCKLGKVYAVASED 180
           K+ IEKFSKRTVKVTKQHN++CKRLLRLMGVPV+EAP EAE++CAALC    VYAVASED
Sbjct: 121 KDAIEKFSKRTVKVTKQHNEECKRLLRLMGVPVVEAPCEAEAECAALCINDMVYAVASED 180

Query: 181 MDSLTFGSPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIR 240
           MDSLTFG+PRFLRHLMDPSS+KIPVMEFEVAK+LEEL LTMDQF+DLCILSGCDYCDSI+
Sbjct: 181 MDSLTFGAPRFLRHLMDPSSKKIPVMEFEVAKVLEELELTMDQFIDLCILSGCDYCDSIK 240

Query: 241 GIGGQTALKLIRQHGQIENILENINKERYQIPEDWPYQEARQLFKEPLVCTDEEQLDIKW 300
           GIGGQTALKLIRQHG IE+ILENINK+RYQIPEDWPYQEAR+LFKEP V  D  +L  KW
Sbjct: 241 GIGGQTALKLIRQHGSIESILENINKDRYQIPEDWPYQEARRLFKEPNVTLDIPEL--KW 300

Query: 301 TTPDEEGLISFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVSNPSASVKRKE 360
             PDEEGL+ FLV ENGFN DRVTKA+EKIK AKNKSSQGRLESFFKPV + S  +KRK+
Sbjct: 301 NAPDEEGLVEFLVKENGFNQDRVTKAIEKIKFAKNKSSQGRLESFFKPVVSTSVPLKRKD 360

Query: 361 TSEKPTKQAATKKSKSGGGKRK 383
           TSEKPTK  A KK+K  GGK+K
Sbjct: 361 TSEKPTKAVANKKTKGAGGKKK 380

[Close]

BLAST of Sed0020210 vs. ExPASy TrEMBL
Match: A0A6J1HYJ9 (Flap endonuclease 1 OS=Cucurbita maxima OX=3661 GN=LOC111468704 PE=3 SV=1)

HSP 1 Score: 724.9 bits (1870), Expect = 1.7e-205
Identity = 368/382 (96.34%), Postives = 375/382 (98.17%), Query Frame = 0


Query: 1   MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 60
           MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE
Sbjct: 1   MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 60

Query: 61  VTSHLQGMFSRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKRADATEDLADAIEVGN 120
           VTSHLQGMF+RTIRLLEAG+KPVYVFDGKPPDLKKQELAKRYSKRADAT DLADAIEVGN
Sbjct: 61  VTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAKRYSKRADATADLADAIEVGN 120

Query: 121 KEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAESQCAALCKLGKVYAVASED 180
           KEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAE+QCAALCKLGKVYAVASED
Sbjct: 121 KEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGKVYAVASED 180

Query: 181 MDSLTFGSPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIR 240
           MDSLTFGSPRFLRHLMDPSSRKIPVMEFEV+KILEELNLTMDQFVDLCILSGCDYCDSIR
Sbjct: 181 MDSLTFGSPRFLRHLMDPSSRKIPVMEFEVSKILEELNLTMDQFVDLCILSGCDYCDSIR 240

Query: 241 GIGGQTALKLIRQHGQIENILENINKERYQIPEDWPYQEARQLFKEPLVCTDEEQLDIKW 300
           GIGGQTALKLIRQHG IENILENINKERYQIPEDWP+QEARQLFKEPLVCTDEEQLDIKW
Sbjct: 241 GIGGQTALKLIRQHGSIENILENINKERYQIPEDWPFQEARQLFKEPLVCTDEEQLDIKW 300

Query: 301 TTPDEEGLISFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVSNPSASVKRKE 360
           TTPDEEGLIS LVNENGFNSDRVTKAVEKIKAAKNKSSQGR+ESFFKPV+NPS S KRKE
Sbjct: 301 TTPDEEGLISLLVNENGFNSDRVTKAVEKIKAAKNKSSQGRMESFFKPVTNPSVSTKRKE 360

Query: 361 TSEKPTKQAATKKSKSGGGKRK 383
           TSEKPTKQA TKKSKS GGKRK
Sbjct: 361 TSEKPTKQAITKKSKSSGGKRK 382

[Close]

BLAST of Sed0020210 vs. ExPASy TrEMBL
Match: A0A6J1EUG5 (Flap endonuclease 1 OS=Cucurbita moschata OX=3662 GN=LOC111437876 PE=3 SV=1)

HSP 1 Score: 722.6 bits (1864), Expect = 8.5e-205
Identity = 368/382 (96.34%), Postives = 374/382 (97.91%), Query Frame = 0


Query: 1   MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 60
           MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE
Sbjct: 1   MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 60

Query: 61  VTSHLQGMFSRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKRADATEDLADAIEVGN 120
           VTSHLQGMF+RTIRLLEAG+KPVYVFDGKPPDLKKQELAKRYSKRADAT DLADAIEVGN
Sbjct: 61  VTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAKRYSKRADATADLADAIEVGN 120

Query: 121 KEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAESQCAALCKLGKVYAVASED 180
           KEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAE+QCAALCKLGKVYAVASED
Sbjct: 121 KEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGKVYAVASED 180

Query: 181 MDSLTFGSPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIR 240
           MDSLTFGSPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIR
Sbjct: 181 MDSLTFGSPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIR 240

Query: 241 GIGGQTALKLIRQHGQIENILENINKERYQIPEDWPYQEARQLFKEPLVCTDEEQLDIKW 300
           GIGGQTALKLIRQHG IENILENINKERYQIPE WP+QEARQLFKEPLVCTDEEQLDIKW
Sbjct: 241 GIGGQTALKLIRQHGSIENILENINKERYQIPEGWPFQEARQLFKEPLVCTDEEQLDIKW 300

Query: 301 TTPDEEGLISFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVSNPSASVKRKE 360
           TTPDEEGLISFLVNENGFNSDRVTKAVEKIKAAKNKSSQGR+ESFFKPV+NPS S KRKE
Sbjct: 301 TTPDEEGLISFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRMESFFKPVTNPSVSTKRKE 360

Query: 361 TSEKPTKQAATKKSKSGGGKRK 383
           TSEKPTKQA TKKSKS GGK K
Sbjct: 361 TSEKPTKQAITKKSKSSGGKIK 382

[Close]

BLAST of Sed0020210 vs. ExPASy TrEMBL
Match: A0A6J1DZ85 (Flap endonuclease 1 OS=Momordica charantia OX=3673 GN=LOC111025974 PE=3 SV=1)

HSP 1 Score: 721.1 bits (1860), Expect = 2.5e-204
Identity = 364/382 (95.29%), Postives = 375/382 (98.17%), Query Frame = 0


Query: 1   MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 60
           MGIKGLTKLLADNAPKGMKEQKFESYFGR+IAIDASMSIYQFLIVVGRSGTEMLTNEAGE
Sbjct: 1   MGIKGLTKLLADNAPKGMKEQKFESYFGRRIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 60

Query: 61  VTSHLQGMFSRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKRADATEDLADAIEVGN 120
           VTSHLQGMF+RTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKRADATEDLADA+E GN
Sbjct: 61  VTSHLQGMFNRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKRADATEDLADAMEAGN 120

Query: 121 KEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAESQCAALCKLGKVYAVASED 180
           KEDIEKFSKRTVKVTKQHN+DCKRLLRLMGVPVIEAPSEAE+QCAALCKLGKVYAVASED
Sbjct: 121 KEDIEKFSKRTVKVTKQHNEDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGKVYAVASED 180

Query: 181 MDSLTFGSPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIR 240
           MDSLTFGSP+FLRHLMDPSSRKIPVMEFEVAKILEELNL+MDQFVDLCILSGCDYCDSIR
Sbjct: 181 MDSLTFGSPKFLRHLMDPSSRKIPVMEFEVAKILEELNLSMDQFVDLCILSGCDYCDSIR 240

Query: 241 GIGGQTALKLIRQHGQIENILENINKERYQIPEDWPYQEARQLFKEPLVCTDEEQLDIKW 300
           GIGGQTALKLIRQHG IE ILENINKERYQIP DWPYQEARQLFKEPLVCTDEEQLDIKW
Sbjct: 241 GIGGQTALKLIRQHGSIETILENINKERYQIPNDWPYQEARQLFKEPLVCTDEEQLDIKW 300

Query: 301 TTPDEEGLISFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVSNPSASVKRKE 360
           TTPDEEGL++FLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPV+NPS  +KRKE
Sbjct: 301 TTPDEEGLLTFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVTNPSVPIKRKE 360

Query: 361 TSEKPTKQAATKKSKSGGGKRK 383
           TSEKPTKQA TKKSKSGGGKRK
Sbjct: 361 TSEKPTKQAVTKKSKSGGGKRK 382

[Close]

BLAST of Sed0020210 vs. ExPASy TrEMBL
Match: A0A0A0LWA2 (Flap endonuclease 1 OS=Cucumis sativus OX=3659 GN=FEN1 PE=3 SV=1)

HSP 1 Score: 716.8 bits (1849), Expect = 4.7e-203
Identity = 361/382 (94.50%), Postives = 376/382 (98.43%), Query Frame = 0


Query: 1   MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 60
           MGIKGLTKLLADNAPKGMKEQKFE+YFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE
Sbjct: 41  MGIKGLTKLLADNAPKGMKEQKFEAYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 100

Query: 61  VTSHLQGMFSRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKRADATEDLADAIEVGN 120
           VTSHLQGMF+RTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKRADATEDLADAIEVGN
Sbjct: 101 VTSHLQGMFNRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKRADATEDLADAIEVGN 160

Query: 121 KEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAESQCAALCKLGKVYAVASED 180
           K+DIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAE+QCAALCKLGKVYAVASED
Sbjct: 161 KDDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGKVYAVASED 220

Query: 181 MDSLTFGSPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIR 240
           MDSLTFGSPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQF+DLCILSGCDYCD+IR
Sbjct: 221 MDSLTFGSPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSGCDYCDNIR 280

Query: 241 GIGGQTALKLIRQHGQIENILENINKERYQIPEDWPYQEARQLFKEPLVCTDEEQLDIKW 300
           GIGG TALKLIRQHG IE+ILENINKERYQIP+DWPY+EARQLFKEPLVCTDEEQLDIKW
Sbjct: 281 GIGGLTALKLIRQHGSIESILENINKERYQIPDDWPYKEARQLFKEPLVCTDEEQLDIKW 340

Query: 301 TTPDEEGLISFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVSNPSASVKRKE 360
           TTPDEEGL++FLVNENGFNS+RVTKAVEKIKAAKNKSSQGR+ESFFKPV+NPS S+KRKE
Sbjct: 341 TTPDEEGLLTFLVNENGFNSERVTKAVEKIKAAKNKSSQGRMESFFKPVTNPSVSIKRKE 400

Query: 361 TSEKPTKQAATKKSKSGGGKRK 383
           TSEKPTKQA TKKSK GG KRK
Sbjct: 401 TSEKPTKQAITKKSKFGGSKRK 422

[Close]

BLAST of Sed0020210 vs. ExPASy TrEMBL
Match: A0A1S3BQC8 (Flap endonuclease 1 OS=Cucumis melo OX=3656 GN=LOC103492083 PE=3 SV=1)

HSP 1 Score: 712.6 bits (1838), Expect = 8.8e-202
Identity = 362/383 (94.52%), Postives = 375/383 (97.91%), Query Frame = 0


Query: 1   MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 60
           MGIKGLTKLLADNAPKGMKEQKFE+YFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE
Sbjct: 1   MGIKGLTKLLADNAPKGMKEQKFETYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 60

Query: 61  VTSHLQGMFSRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKRADATEDLADAIEVGN 120
           VTSHLQGMF+RTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKRADATEDLADAIEVGN
Sbjct: 61  VTSHLQGMFNRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKRADATEDLADAIEVGN 120

Query: 121 KEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIE-APSEAESQCAALCKLGKVYAVASE 180
           KEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIE APSEAE+QCAALCKLGKVYAVASE
Sbjct: 121 KEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEQAPSEAEAQCAALCKLGKVYAVASE 180

Query: 181 DMDSLTFGSPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSI 240
           DMDSLTFGSPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQF+DLCILSGCDYCD+I
Sbjct: 181 DMDSLTFGSPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSGCDYCDNI 240

Query: 241 RGIGGQTALKLIRQHGQIENILENINKERYQIPEDWPYQEARQLFKEPLVCTDEEQLDIK 300
           RGIGG TALKLIRQHG IE ILENINKERYQIP+DWPY+EARQLFKEPLVCTDEEQLDIK
Sbjct: 241 RGIGGLTALKLIRQHGAIEGILENINKERYQIPDDWPYKEARQLFKEPLVCTDEEQLDIK 300

Query: 301 WTTPDEEGLISFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVSNPSASVKRK 360
           WTTPDEEGL++FLVNENGFNS+RVTKAVEKIKAAKNKSSQGR+ESFFKPV+NPS S+KRK
Sbjct: 301 WTTPDEEGLLTFLVNENGFNSERVTKAVEKIKAAKNKSSQGRMESFFKPVTNPSVSIKRK 360

Query: 361 ETSEKPTKQAATKKSKSGGGKRK 383
           ETSEKPTKQA  KKSKSGG KRK
Sbjct: 361 ETSEKPTKQAIMKKSKSGGSKRK 383

[Close]

BLAST of Sed0020210 vs. TAIR 10
Match: AT5G26680.2 (5'-3' exonuclease family protein )

HSP 1 Score: 656.8 bits (1693), Expect = 1.1e-188
Identity = 330/382 (86.39%), Postives = 352/382 (92.15%), Query Frame = 0


Query: 1   MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 60
           MGIKGLTKLLADNAP  MKEQKFESYFGRKIA+DASMSIYQFLIVVGR+GTEMLTNEAGE
Sbjct: 1   MGIKGLTKLLADNAPSCMKEQKFESYFGRKIAVDASMSIYQFLIVVGRTGTEMLTNEAGE 60

Query: 61  VTSHLQGMFSRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKRADATEDLADAIEVGN 120
           VTSHLQGMF+RTIRLLEAGIKPVYVFDGKPP+LK+QELAKRYSKRADAT DL  AIE GN
Sbjct: 61  VTSHLQGMFNRTIRLLEAGIKPVYVFDGKPPELKRQELAKRYSKRADATADLTGAIEAGN 120

Query: 121 KEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAESQCAALCKLGKVYAVASED 180
           KEDIEK+SKRTVKVTKQHNDDCKRLLRLMGVPV+EA SEAE+QCAALCK GKVY VASED
Sbjct: 121 KEDIEKYSKRTVKVTKQHNDDCKRLLRLMGVPVVEATSEAEAQCAALCKSGKVYGVASED 180

Query: 181 MDSLTFGSPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIR 240
           MDSLTFG+P+FLRHLMDPSSRKIPVMEFEVAKILEEL LTMDQF+DLCILSGCDYCDSIR
Sbjct: 181 MDSLTFGAPKFLRHLMDPSSRKIPVMEFEVAKILEELQLTMDQFIDLCILSGCDYCDSIR 240

Query: 241 GIGGQTALKLIRQHGQIENILENINKERYQIPEDWPYQEARQLFKEPLVCTDEEQLDIKW 300
           GIGGQTALKLIRQHG IE ILEN+NKERYQIPE+WPY EAR+LFKEP V TDEEQLDIKW
Sbjct: 241 GIGGQTALKLIRQHGSIETILENLNKERYQIPEEWPYNEARKLFKEPDVITDEEQLDIKW 300

Query: 301 TTPDEEGLISFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVSNPSASVKRKE 360
           T+PDEEG++ FLVNENGFN DRVTKA+EKIK AKNKSSQGRLESFFKPV+N S   KRKE
Sbjct: 301 TSPDEEGIVQFLVNENGFNIDRVTKAIEKIKTAKNKSSQGRLESFFKPVANSSVPAKRKE 360

Query: 361 TSEKPTKQAATKKSKSGGGKRK 383
             E  TK AA KK+K  GG++K
Sbjct: 361 IPESTTKGAANKKTKGAGGRKK 382

[Close]

BLAST of Sed0020210 vs. TAIR 10
Match: AT5G26680.1 (5'-3' exonuclease family protein )

HSP 1 Score: 641.3 bits (1653), Expect = 4.8e-184
Identity = 318/359 (88.58%), Postives = 337/359 (93.87%), Query Frame = 0


Query: 1   MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 60
           MGIKGLTKLLADNAP  MKEQKFESYFGRKIA+DASMSIYQFLIVVGR+GTEMLTNEAGE
Sbjct: 1   MGIKGLTKLLADNAPSCMKEQKFESYFGRKIAVDASMSIYQFLIVVGRTGTEMLTNEAGE 60

Query: 61  VTSHLQGMFSRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKRADATEDLADAIEVGN 120
           VTSHLQGMF+RTIRLLEAGIKPVYVFDGKPP+LK+QELAKRYSKRADAT DL  AIE GN
Sbjct: 61  VTSHLQGMFNRTIRLLEAGIKPVYVFDGKPPELKRQELAKRYSKRADATADLTGAIEAGN 120

Query: 121 KEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAESQCAALCKLGKVYAVASED 180
           KEDIEK+SKRTVKVTKQHNDDCKRLLRLMGVPV+EA SEAE+QCAALCK GKVY VASED
Sbjct: 121 KEDIEKYSKRTVKVTKQHNDDCKRLLRLMGVPVVEATSEAEAQCAALCKSGKVYGVASED 180

Query: 181 MDSLTFGSPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIR 240
           MDSLTFG+P+FLRHLMDPSSRKIPVMEFEVAKILEEL LTMDQF+DLCILSGCDYCDSIR
Sbjct: 181 MDSLTFGAPKFLRHLMDPSSRKIPVMEFEVAKILEELQLTMDQFIDLCILSGCDYCDSIR 240

Query: 241 GIGGQTALKLIRQHGQIENILENINKERYQIPEDWPYQEARQLFKEPLVCTDEEQLDIKW 300
           GIGGQTALKLIRQHG IE ILEN+NKERYQIPE+WPY EAR+LFKEP V TDEEQLDIKW
Sbjct: 241 GIGGQTALKLIRQHGSIETILENLNKERYQIPEEWPYNEARKLFKEPDVITDEEQLDIKW 300

Query: 301 TTPDEEGLISFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVSNPSASVKRK 360
           T+PDEEG++ FLVNENGFN DRVTKA+EKIK AKNKSSQGRLESFFKPV+N S   KRK
Sbjct: 301 TSPDEEGIVQFLVNENGFNIDRVTKAIEKIKTAKNKSSQGRLESFFKPVANSSVPAKRK 359

[Close]

BLAST of Sed0020210 vs. TAIR 10
Match: AT1G29630.2 (5'-3' exonuclease family protein )

HSP 1 Score: 93.6 bits (231), Expect = 3.7e-19
Identity = 79/281 (28.11%), Postives = 135/281 (48.04%), Query Frame = 0


Query: 1   MGIKGLTKLLAD-NAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAG 60
           MGI+GL  LL     P  +KE +     G  +A+D    +++  +   R   + L  +  
Sbjct: 1   MGIQGLLPLLKSIMVPIHIKELE-----GCIVAVDTYSWLHKGALSCSRELCKGLPTK-- 60

Query: 61  EVTSHLQGMFSRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKRADATEDLADAIE-- 120
               H+Q    R   L   G+KP+ VFDG P  +K ++  KR   R    E+LA A+E  
Sbjct: 61  ---RHIQYCMHRVNLLRHHGVKPIMVFDGGPLPMKLEQENKRARSR---KENLARALEHE 120

Query: 121 -VGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAESQCAALCKLGKVYAV 180
             GN     +   + V ++     +  ++LR   V  + AP EA++Q A L    +V A+
Sbjct: 121 ANGNSSAAYECYSKAVDISPSIAHELIQVLRQENVDYVVAPYEADAQMAFLAITKQVDAI 180

Query: 181 ASEDMDSLTFGSPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQF-----VDLCILS 240
            +ED D + FG  R +   MD     +   EF+ +K+ +  +L++  F     +++CILS
Sbjct: 181 ITEDSDLIPFGCLRII-FKMDKFGHGV---EFQASKLPKNKDLSLSGFSSQMLLEMCILS 240

Query: 241 GCDYCDSIRGIGGQTALKLIRQHGQIENILENINKERYQIP 273
           GCDY  S+ G+G + A  LI +    + +++++      +P
Sbjct: 241 GCDYLQSLPGMGLKRAHALITKFKSYDRVIKHLKYSTVSVP 264

[Close]

BLAST of Sed0020210 vs. TAIR 10
Match: AT1G01880.1 (5'-3' exonuclease family protein )

HSP 1 Score: 85.5 bits (210), Expect = 1.0e-16
Identity = 70/248 (28.23%), Postives = 117/248 (47.18%), Query Frame = 0


Query: 19  KEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFSRTIRLL-E 78
           ++Q F+    +++A+D S  I Q    V          +   +  HL+  F RTI L  +
Sbjct: 16  QQQGFDFLRNKRVAVDLSFWIVQHETAV----------KGFVLKPHLRLTFFRTINLFSK 75

Query: 79  AGIKPVYVFDGKPPDLKKQELAKRYSKRADATEDLADAIEVGNKEDIEKFSKRTVKVTKQ 138
            G  PV+V DG P  LK Q    R+ + +         I+ G   +  K     V+    
Sbjct: 76  FGAYPVFVVDGTPSPLKSQARISRFFRSSGIDTCNLPVIKDGVSVERNKLFSEWVR---- 135

Query: 139 HNDDCKRLLRLMGVPVIEAPSEAESQCAALCKLGKVYAVASEDMDSLTFGSPRFLRHLMD 198
              +C  LL L+G+PV++A  EAE+ CA L   G V A  + D D+  FG+   ++ +  
Sbjct: 136 ---ECVELLELLGIPVLKANGEAEALCAQLNSQGFVDACITPDSDAFLFGAMCVIKDI-K 195

Query: 199 PSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDY-CDSIRGIGGQTALKLIRQHGQ 258
           P+SR+ P   + ++ I   L L     + + +L G DY    + GIG   AL+++R+  +
Sbjct: 196 PNSRE-PFECYHMSHIESGLGLKRKHLIAISLLVGNDYDSGGVLGIGVDKALRIVREFSE 243

Query: 259 IENILENI 265
            + +LE +
Sbjct: 256 -DQVLERL 243

[Close]

BLAST of Sed0020210 vs. TAIR 10
Match: AT1G01880.2 (5'-3' exonuclease family protein )

HSP 1 Score: 82.4 bits (202), Expect = 8.6e-16
Identity = 70/248 (28.23%), Postives = 118/248 (47.58%), Query Frame = 0


Query: 19  KEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFSRTIRLL-E 78
           ++Q F+    +++A+D S  I Q    V          +   +  HL+  F RTI L  +
Sbjct: 16  QQQGFDFLRNKRVAVDLSFWIVQHETAV----------KGFVLKPHLRLTFFRTINLFSK 75

Query: 79  AGIKPVYVFDGKPPDLKKQELAKRYSKRADATEDLADAIEVGNKEDIEKFSKRTVKVTKQ 138
            G  PV+V DG P  LK Q    R+ + +         I+ G   +  K     V+    
Sbjct: 76  FGAYPVFVVDGTPSPLKSQARISRFFRSSGIDTCNLPVIKDGVSVERNKLFSEWVR---- 135

Query: 139 HNDDCKRLLRLMGVPVIEAPSEAESQCAALCKLGKVYAVASEDMDSLTFGSPRFLRHLMD 198
              +C+ LL L+G+PV++A  EAE+ CA L   G V A  + D D+  FG+   ++ +  
Sbjct: 136 ---ECE-LLELLGIPVLKANGEAEALCAQLNSQGFVDACITPDSDAFLFGAMCVIKDI-K 195

Query: 199 PSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDY-CDSIRGIGGQTALKLIRQHGQ 258
           P+SR+ P   + ++ I   L L     + + +L G DY    + GIG   AL+++R+  +
Sbjct: 196 PNSRE-PFECYHMSHIESGLGLKRKHLIAISLLVGNDYDSGGVLGIGVDKALRIVREFSE 242

Query: 259 IENILENI 265
            + +LE +
Sbjct: 256 -DQVLERL 242

The following BLAST results are available for this feature:

BLAST of Sed0020210 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6588523.1	2.1e-205	96.60	Flap endonuclease 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022969706.1	3.5e-205	96.34	flap endonuclease 1 isoform X2 [Cucurbita maxima]	[more]
XP_023531872.1	7.9e-205	96.34	flap endonuclease 1 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022931726.1	1.8e-204	96.34	flap endonuclease 1 isoform X2 [Cucurbita moschata]	[more]
XP_038879462.1	3.0e-204	95.29	flap endonuclease 1 isoform X2 [Benincasa hispida]	[more]

BLAST of Sed0020210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
C6TEX6	4.8e-189	86.65	Flap endonuclease 1 OS=Glycine max OX=3847 GN=FEN1 PE=2 SV=1	[more]
O65251	1.5e-187	86.39	Flap endonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=FEN1 PE=3 SV=2	[more]
B4FHY0	2.9e-178	82.41	Flap endonuclease 1 OS=Zea mays OX=4577 GN=FEN1 PE=2 SV=1	[more]
B8AW67	5.0e-178	82.46	Flap endonuclease 1-A OS=Oryza sativa subsp. indica OX=39946 GN=FEN1a PE=3 SV=1	[more]
Q9SXQ6	5.0e-178	82.46	Flap endonuclease 1-A OS=Oryza sativa subsp. japonica OX=39947 GN=FEN1A PE=1 SV=...	[more]

BLAST of Sed0020210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HYJ9	1.7e-205	96.34	Flap endonuclease 1 OS=Cucurbita maxima OX=3661 GN=LOC111468704 PE=3 SV=1	[more]
A0A6J1EUG5	8.5e-205	96.34	Flap endonuclease 1 OS=Cucurbita moschata OX=3662 GN=LOC111437876 PE=3 SV=1	[more]
A0A6J1DZ85	2.5e-204	95.29	Flap endonuclease 1 OS=Momordica charantia OX=3673 GN=LOC111025974 PE=3 SV=1	[more]
A0A0A0LWA2	4.7e-203	94.50	Flap endonuclease 1 OS=Cucumis sativus OX=3659 GN=FEN1 PE=3 SV=1	[more]
A0A1S3BQC8	8.8e-202	94.52	Flap endonuclease 1 OS=Cucumis melo OX=3656 GN=LOC103492083 PE=3 SV=1	[more]

BLAST of Sed0020210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G26680.2	1.1e-188	86.39	5'-3' exonuclease family protein	[more]
AT5G26680.1	4.8e-184	88.58	5'-3' exonuclease family protein	[more]
AT1G29630.2	3.7e-19	28.11	5'-3' exonuclease family protein	[more]
AT1G01880.1	1.0e-16	28.23	5'-3' exonuclease family protein	[more]
AT1G01880.2	8.6e-16	28.23	5'-3' exonuclease family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006084	XPG/Rad2 endonuclease	PRINTS	PR00853	XPGRADSUPER	coord: 146..163 score: 56.25 coord: 82..101 score: 57.5 coord: 167..187 score: 47.77 coord: 28..42 score: 49.38 coord: 224..239 score: 52.93
IPR006084	XPG/Rad2 endonuclease	PANTHER	PTHR11081	FLAP ENDONUCLEASE FAMILY MEMBER	coord: 1..374
IPR006086	XPG-I domain	SMART	SM00484	xpgineu	coord: 147..219 e-value: 5.7E-34 score: 128.9
IPR006086	XPG-I domain	PFAM	PF00867	XPG_I	coord: 147..234 e-value: 3.4E-30 score: 104.2
IPR002421	5'-3' exonuclease	SMART	SM00475	53exo3	coord: 29..299 e-value: 0.0043 score: -84.3
IPR006085	XPG, N-terminal	SMART	SM00485	xpgn3	coord: 1..108 e-value: 5.6E-56 score: 202.0
IPR006085	XPG, N-terminal	PFAM	PF00752	XPG_N	coord: 1..107 e-value: 1.3E-30 score: 105.8
IPR008918	Helix-hairpin-helix motif, class 2	SMART	SM00279	HhH_4	coord: 221..254 e-value: 5.0E-14 score: 62.6
None	No IPR available	GENE3D	1.10.150.20		coord: 223..286 e-value: 5.3E-31 score: 108.5
None	No IPR available	GENE3D	3.40.50.1010		coord: 10..222 e-value: 1.2E-77 score: 262.3
None	No IPR available	PANTHER	PTHR11081:SF9	FLAP ENDONUCLEASE 1	coord: 1..374
None	No IPR available	CDD	cd09867	PIN_FEN1	coord: 4..332 e-value: 5.24012E-133 score: 380.206
None	No IPR available	CDD	cd09907	H3TH_FEN1-Euk	coord: 222..289 e-value: 2.11351E-41 score: 138.834
IPR019974	XPG conserved site	PROSITE	PS00841	XPG_1	coord: 80..94
IPR019974	XPG conserved site	PROSITE	PS00842	XPG_2	coord: 150..164
IPR023426	Flap endonuclease 1	HAMAP	MF_00614	Fen	coord: 1..347 score: 149.112137
IPR036279	5'-3' exonuclease, C-terminal domain superfamily	SUPERFAMILY	47807	5' to 3' exonuclease, C-terminal subdomain	coord: 219..353
IPR029060	PIN-like domain superfamily	SUPERFAMILY	88723	PIN domain-like	coord: 2..234

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0020210.1	Sed0020210.1	mRNA
Sed0020210.2	Sed0020210.2	mRNA
Sed0020210.3	Sed0020210.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006284	base-excision repair
biological_process	GO:0043137	DNA replication, removal of RNA primer
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0005654	nucleoplasm
molecular_function	GO:0008409	5'-3' exonuclease activity
molecular_function	GO:0017108	5'-flap endonuclease activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0016788	hydrolase activity, acting on ester bonds
molecular_function	GO:0004518	nuclease activity