Sed0020186 (gene) Chayote v1

Overview


Name	Sed0020186
Type	gene
Organism	Sechium edule (Chayote v1)
Description	AWPM-19-like protein
Location	LG10: 1053771 .. 1054772 (+)
RNA-Seq Expression	Sed0020186
Synteny	Sed0020186

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGCTGTTGCGGCATCGATTTTGTTCATCAATTTCTGCATATGCATCGTCATTTTCGGGATCGGTGGCTGGGTGATGAATCGCACAATCGATAATGGATTTGTCATTGGTTTGAATCAACTCTGCTTCCTCATTTTTTTATGCTCTTCTTTCAACTTTGGTGTTTGATGTTTCTTTTAATGGTAATGTTGTGCCAGTTTTTGATTTTCAGGTGTAGATCTTGAAGTTCCTCCATATTTTTCTCCAATTTTCTTTCAAATTGGGAATTCTGCCACTGGGTTCTTTGTTGTTTTTGCTTTGATTGCTGCTGTTGCTGTTGTTGCATCTGTCCTCTCTGGAAGCTTTTATTTTCGGTTTTCCGATCACAGCAACTTGCCTTCTGCTGCTTCGACAGCTCTCGTTGCTTGGTTTCTAACTTTGCTTGCCATGGGGTACACAAGTTCACTTAAACTTTCAAATATTTTGTTCTATTCCATAAACTCCACAAAGAAGCTATATAGTCTTTGAATAATTTAGCAAATCTAAACGCATTTCGAATACAACCCTTCATTCACGACGTGCAACTTAAAGTTTTAAAATTTTCACCATACATTGTAACCATTTCTCAGATTGATTCCTTGTTAGAACAGTTGAGTCAAAGGAACATAATCCAAGTATCTGGAAACTGAAAACCTATTAAAAAGTTGAAACCTTTTCAAAATGGATTATAACTATGAATGAATGTCACTAATGCAGGTTTGCTTGGAAAGAAATTGCTTTAACTGTAAACAGTGGCCATCTGGTGAGGAACCTGTTGTTTTTCTTTCTTTTCTTTTCCCTTTTTAGCAGAATTTGTTTAAGTTCTTCAAAAGTTCTTCACAGAATAGTGGAAACCACAAAGCTAAGGTTAATGAGTTCTCATGTTCTTTTATGCAGATTGCATTGGAGGCTTTCCTGATTATCCTTTCAGTTACACAGTTTATTTATACTGCAATCATGATGTGGACCTCAACCAGTTAG

mRNA sequence

ATGAAAGCTGTTGCGGCATCGATTTTGTTCATCAATTTCTGCATATGCATCGTCATTTTCGGGATCGGTGGCTGGGTGATGAATCGCACAATCGATAATGGATTTGTCATTGGTGTAGATCTTGAAGTTCCTCCATATTTTTCTCCAATTTTCTTTCAAATTGGGAATTCTGCCACTGGGTTCTTTGTTGTTTTTGCTTTGATTGCTGCTGTTGCTGTTGTTGCATCTGTCCTCTCTGGAAGCTTTTATTTTCGGTTTTCCGATCACAGCAACTTGCCTTCTGCTGCTTCGACAGCTCTCGTTGCTTGGTTTCTAACTTTGCTTGCCATGGGGTTTGCTTGGAAAGAAATTGCTTTAACTGTAAACAGTGGCCATCTGATTGCATTGGAGGCTTTCCTGATTATCCTTTCAGTTACACAGTTTATTTATACTGCAATCATGATGTGGACCTCAACCAGTTAG

Coding sequence (CDS)

ATGAAAGCTGTTGCGGCATCGATTTTGTTCATCAATTTCTGCATATGCATCGTCATTTTCGGGATCGGTGGCTGGGTGATGAATCGCACAATCGATAATGGATTTGTCATTGGTGTAGATCTTGAAGTTCCTCCATATTTTTCTCCAATTTTCTTTCAAATTGGGAATTCTGCCACTGGGTTCTTTGTTGTTTTTGCTTTGATTGCTGCTGTTGCTGTTGTTGCATCTGTCCTCTCTGGAAGCTTTTATTTTCGGTTTTCCGATCACAGCAACTTGCCTTCTGCTGCTTCGACAGCTCTCGTTGCTTGGTTTCTAACTTTGCTTGCCATGGGGTTTGCTTGGAAAGAAATTGCTTTAACTGTAAACAGTGGCCATCTGATTGCATTGGAGGCTTTCCTGATTATCCTTTCAGTTACACAGTTTATTTATACTGCAATCATGATGTGGACCTCAACCAGTTAG

Protein sequence

MKAVAASILFINFCICIVIFGIGGWVMNRTIDNGFVIGVDLEVPPYFSPIFFQIGNSATGFFVVFALIAAVAVVASVLSGSFYFRFSDHSNLPSAASTALVAWFLTLLAMGFAWKEIALTVNSGHLIALEAFLIILSVTQFIYTAIMMWTSTS

Homology

[Close]

BLAST of Sed0020186 vs. NCBI nr
Match: XP_038882133.1 (uncharacterized protein LOC120073380 isoform X2 [Benincasa hispida])

HSP 1 Score: 251.9 bits (642), Expect = 3.5e-63
Identity = 131/152 (86.18%), Postives = 139/152 (91.45%), Query Frame = 0


Query: 1   MKAVAASILFINFCICIVIFGIGGWVMNRTIDNGFVIGVDLEVPPYFSPIFFQIGNSATG 60
           MKA+AA ILF NFCICIVIFGIGGWVMN T+DNGFVIG   EVP YFSPIFFQIGNSATG
Sbjct: 1   MKAIAAPILFFNFCICIVIFGIGGWVMNHTMDNGFVIGAGFEVPQYFSPIFFQIGNSATG 60

Query: 61  FFVVFALIAAVAVVASVLSGSFYFRFSDHSNLPSAASTALVAWFLTLLAMGFAWKEIALT 120
           FFV+FALIAAVAVVAS +SGSFYFRFSD SNLP AASTAL+A FLT LAMGFAWKEIALT
Sbjct: 61  FFVIFALIAAVAVVASAISGSFYFRFSDSSNLPPAASTALIACFLTFLAMGFAWKEIALT 120

Query: 121 VNSGHLIALEAFLIILSVTQFIYTAIMMWTST 153
           V SGHLIALEAFLIILSVTQF+YTAI++WTST
Sbjct: 121 VTSGHLIALEAFLIILSVTQFVYTAIIVWTST 152

[Close]

BLAST of Sed0020186 vs. NCBI nr
Match: KAA0052579.1 (AWPM-19-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 246.5 bits (628), Expect = 1.5e-61
Identity = 127/153 (83.01%), Postives = 139/153 (90.85%), Query Frame = 0


Query: 1   MKAVAASILFINFCICIVIFGIGGWVMNRTIDNGFVIGVDLEVPPYFSPIFFQIGNSATG 60
           MKA+AA ILF NFCICIVIFGIGGWVMN TIDNGFVIG   +VP YFSPIFFQIGNSATG
Sbjct: 1   MKAIAAPILFFNFCICIVIFGIGGWVMNHTIDNGFVIGAGFDVPNYFSPIFFQIGNSATG 60

Query: 61  FFVVFALIAAVAVVASVLSGSFYFRFSDHSNLPSAASTALVAWFLTLLAMGFAWKEIALT 120
           FFV+FALIAAVAVVAS +SG+FYFRFSD +NLP AASTALVA FLT LAMGFAWKEIA+T
Sbjct: 61  FFVIFALIAAVAVVASAISGNFYFRFSDAANLPPAASTALVACFLTFLAMGFAWKEIAMT 120

Query: 121 VNSGHLIALEAFLIILSVTQFIYTAIMMWTSTS 154
           V SGHLIALEA +I+LSVTQF+YTAI++WTSTS
Sbjct: 121 VTSGHLIALEALMIVLSVTQFVYTAIIVWTSTS 153

[Close]

BLAST of Sed0020186 vs. NCBI nr
Match: TYK13246.1 (uncharacterized protein E5676_scaffold255G008640 [Cucumis melo var. makuwa])

HSP 1 Score: 246.5 bits (628), Expect = 1.5e-61
Identity = 127/153 (83.01%), Postives = 139/153 (90.85%), Query Frame = 0


Query: 1   MKAVAASILFINFCICIVIFGIGGWVMNRTIDNGFVIGVDLEVPPYFSPIFFQIGNSATG 60
           MKA+AA ILF NFCICIVIFGIGGWVMN TIDNGFVIG   +VP YFSPIFFQIGNSATG
Sbjct: 34  MKAIAAPILFFNFCICIVIFGIGGWVMNHTIDNGFVIGAGFDVPNYFSPIFFQIGNSATG 93

Query: 61  FFVVFALIAAVAVVASVLSGSFYFRFSDHSNLPSAASTALVAWFLTLLAMGFAWKEIALT 120
           FFV+FALIAAVAVVAS +SG+FYFRFSD +NLP AASTALVA FLT LAMGFAWKEIA+T
Sbjct: 94  FFVIFALIAAVAVVASAISGNFYFRFSDAANLPPAASTALVACFLTFLAMGFAWKEIAMT 153

Query: 121 VNSGHLIALEAFLIILSVTQFIYTAIMMWTSTS 154
           V SGHLIALEA +I+LSVTQF+YTAI++WTSTS
Sbjct: 154 VTSGHLIALEALMIVLSVTQFVYTAIIVWTSTS 186

[Close]

BLAST of Sed0020186 vs. NCBI nr
Match: XP_008439689.1 (PREDICTED: uncharacterized protein LOC103484407 [Cucumis melo])

HSP 1 Score: 245.4 bits (625), Expect = 3.3e-61
Identity = 126/153 (82.35%), Postives = 139/153 (90.85%), Query Frame = 0


Query: 1   MKAVAASILFINFCICIVIFGIGGWVMNRTIDNGFVIGVDLEVPPYFSPIFFQIGNSATG 60
           MKA+AA ILF NFCICIVIFGIGGWVMN TIDNGFVIG   +VP YFSPIFFQIGNSATG
Sbjct: 1   MKAIAAPILFFNFCICIVIFGIGGWVMNHTIDNGFVIGAGFDVPNYFSPIFFQIGNSATG 60

Query: 61  FFVVFALIAAVAVVASVLSGSFYFRFSDHSNLPSAASTALVAWFLTLLAMGFAWKEIALT 120
           FFV+FALIAAVAVVAS +SG+FYFR+SD +NLP AASTALVA FLT LAMGFAWKEIA+T
Sbjct: 61  FFVIFALIAAVAVVASAISGNFYFRYSDAANLPPAASTALVACFLTFLAMGFAWKEIAMT 120

Query: 121 VNSGHLIALEAFLIILSVTQFIYTAIMMWTSTS 154
           V SGHLIALEA +I+LSVTQF+YTAI++WTSTS
Sbjct: 121 VTSGHLIALEALMIVLSVTQFVYTAIIVWTSTS 153

[Close]

BLAST of Sed0020186 vs. NCBI nr
Match: XP_004134640.1 (uncharacterized protein LOC101209586 [Cucumis sativus] >KGN49356.1 hypothetical protein Csa_004019 [Cucumis sativus])

HSP 1 Score: 239.2 bits (609), Expect = 2.4e-59
Identity = 121/153 (79.08%), Postives = 137/153 (89.54%), Query Frame = 0


Query: 1   MKAVAASILFINFCICIVIFGIGGWVMNRTIDNGFVIGVDLEVPPYFSPIFFQIGNSATG 60
           MKA+AA ILF NFCIC+VIFGIGGWVMN TIDNGFVIG   +VP YFSPIFFQIGNSATG
Sbjct: 1   MKAIAAPILFFNFCICVVIFGIGGWVMNHTIDNGFVIGAGFDVPNYFSPIFFQIGNSATG 60

Query: 61  FFVVFALIAAVAVVASVLSGSFYFRFSDHSNLPSAASTALVAWFLTLLAMGFAWKEIALT 120
           FF++FALIAAVAVVAS ++GSFYFRF + +N P AASTALVA FLT LAMGFAWKEIA+T
Sbjct: 61  FFIIFALIAAVAVVASAITGSFYFRFPETANQPPAASTALVACFLTFLAMGFAWKEIAMT 120

Query: 121 VNSGHLIALEAFLIILSVTQFIYTAIMMWTSTS 154
           V SGHLIALEAF+I+LS+TQF+YTAI++W STS
Sbjct: 121 VTSGHLIALEAFVIVLSITQFVYTAIIVWISTS 153

[Close]

BLAST of Sed0020186 vs. ExPASy Swiss-Prot
Match: Q6L4D2 (Membrane protein PM19L OS=Oryza sativa subsp. japonica OX=39947 GN=PM19L PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 9.4e-11
Identity = 52/147 (35.37%), Postives = 80/147 (54.42%), Query Frame = 0


Query: 2   KAVAASILFINFCICIVIFGIGGWVMNRTIDNGFVIGVDLEVPPYFSPIFFQIGNSATGF 61
           + + A +L +N  + +++ G   W +N  I NG     +   P          GN AT +
Sbjct: 6   RTMIAPLLVLNLIMYLIVIGFASWNLNHYI-NG-----ETNHPGV-------AGNGATFY 65

Query: 62  FVVFALIAAVAVVASVLSGSFYFRFSDHSNLPSAASTALVAWFLTLLAMGFAWKEIALTV 121
           F+VFA++A V   AS L+G  + R     +L + A++AL+AW +T LA G A KEI +  
Sbjct: 66  FLVFAILAGVVGAASKLAGVHHVRSWGAHSLAAGAASALIAWAITALAFGLACKEIHIGG 125

Query: 122 NSG-HLIALEAFLIILSVTQFIYTAIM 148
             G  L  LEAF+IIL+ TQ +Y A++
Sbjct: 126 YRGWRLRVLEAFVIILAFTQLLYVAML 139

[Close]

BLAST of Sed0020186 vs. ExPASy TrEMBL
Match: A0A5A7UGF2 (AWPM-19-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G001840 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 7.1e-62
Identity = 127/153 (83.01%), Postives = 139/153 (90.85%), Query Frame = 0


Query: 1   MKAVAASILFINFCICIVIFGIGGWVMNRTIDNGFVIGVDLEVPPYFSPIFFQIGNSATG 60
           MKA+AA ILF NFCICIVIFGIGGWVMN TIDNGFVIG   +VP YFSPIFFQIGNSATG
Sbjct: 1   MKAIAAPILFFNFCICIVIFGIGGWVMNHTIDNGFVIGAGFDVPNYFSPIFFQIGNSATG 60

Query: 61  FFVVFALIAAVAVVASVLSGSFYFRFSDHSNLPSAASTALVAWFLTLLAMGFAWKEIALT 120
           FFV+FALIAAVAVVAS +SG+FYFRFSD +NLP AASTALVA FLT LAMGFAWKEIA+T
Sbjct: 61  FFVIFALIAAVAVVASAISGNFYFRFSDAANLPPAASTALVACFLTFLAMGFAWKEIAMT 120

Query: 121 VNSGHLIALEAFLIILSVTQFIYTAIMMWTSTS 154
           V SGHLIALEA +I+LSVTQF+YTAI++WTSTS
Sbjct: 121 VTSGHLIALEALMIVLSVTQFVYTAIIVWTSTS 153

[Close]

BLAST of Sed0020186 vs. ExPASy TrEMBL
Match: A0A5D3CS83 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008640 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 7.1e-62
Identity = 127/153 (83.01%), Postives = 139/153 (90.85%), Query Frame = 0


Query: 1   MKAVAASILFINFCICIVIFGIGGWVMNRTIDNGFVIGVDLEVPPYFSPIFFQIGNSATG 60
           MKA+AA ILF NFCICIVIFGIGGWVMN TIDNGFVIG   +VP YFSPIFFQIGNSATG
Sbjct: 34  MKAIAAPILFFNFCICIVIFGIGGWVMNHTIDNGFVIGAGFDVPNYFSPIFFQIGNSATG 93

Query: 61  FFVVFALIAAVAVVASVLSGSFYFRFSDHSNLPSAASTALVAWFLTLLAMGFAWKEIALT 120
           FFV+FALIAAVAVVAS +SG+FYFRFSD +NLP AASTALVA FLT LAMGFAWKEIA+T
Sbjct: 94  FFVIFALIAAVAVVASAISGNFYFRFSDAANLPPAASTALVACFLTFLAMGFAWKEIAMT 153

Query: 121 VNSGHLIALEAFLIILSVTQFIYTAIMMWTSTS 154
           V SGHLIALEA +I+LSVTQF+YTAI++WTSTS
Sbjct: 154 VTSGHLIALEALMIVLSVTQFVYTAIIVWTSTS 186

[Close]

BLAST of Sed0020186 vs. ExPASy TrEMBL
Match: A0A1S3AZB2 (uncharacterized protein LOC103484407 OS=Cucumis melo OX=3656 GN=LOC103484407 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.6e-61
Identity = 126/153 (82.35%), Postives = 139/153 (90.85%), Query Frame = 0


Query: 1   MKAVAASILFINFCICIVIFGIGGWVMNRTIDNGFVIGVDLEVPPYFSPIFFQIGNSATG 60
           MKA+AA ILF NFCICIVIFGIGGWVMN TIDNGFVIG   +VP YFSPIFFQIGNSATG
Sbjct: 1   MKAIAAPILFFNFCICIVIFGIGGWVMNHTIDNGFVIGAGFDVPNYFSPIFFQIGNSATG 60

Query: 61  FFVVFALIAAVAVVASVLSGSFYFRFSDHSNLPSAASTALVAWFLTLLAMGFAWKEIALT 120
           FFV+FALIAAVAVVAS +SG+FYFR+SD +NLP AASTALVA FLT LAMGFAWKEIA+T
Sbjct: 61  FFVIFALIAAVAVVASAISGNFYFRYSDAANLPPAASTALVACFLTFLAMGFAWKEIAMT 120

Query: 121 VNSGHLIALEAFLIILSVTQFIYTAIMMWTSTS 154
           V SGHLIALEA +I+LSVTQF+YTAI++WTSTS
Sbjct: 121 VTSGHLIALEALMIVLSVTQFVYTAIIVWTSTS 153

[Close]

BLAST of Sed0020186 vs. ExPASy TrEMBL
Match: A0A0A0KNQ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G521030 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.1e-59
Identity = 121/153 (79.08%), Postives = 137/153 (89.54%), Query Frame = 0


Query: 1   MKAVAASILFINFCICIVIFGIGGWVMNRTIDNGFVIGVDLEVPPYFSPIFFQIGNSATG 60
           MKA+AA ILF NFCIC+VIFGIGGWVMN TIDNGFVIG   +VP YFSPIFFQIGNSATG
Sbjct: 1   MKAIAAPILFFNFCICVVIFGIGGWVMNHTIDNGFVIGAGFDVPNYFSPIFFQIGNSATG 60

Query: 61  FFVVFALIAAVAVVASVLSGSFYFRFSDHSNLPSAASTALVAWFLTLLAMGFAWKEIALT 120
           FF++FALIAAVAVVAS ++GSFYFRF + +N P AASTALVA FLT LAMGFAWKEIA+T
Sbjct: 61  FFIIFALIAAVAVVASAITGSFYFRFPETANQPPAASTALVACFLTFLAMGFAWKEIAMT 120

Query: 121 VNSGHLIALEAFLIILSVTQFIYTAIMMWTSTS 154
           V SGHLIALEAF+I+LS+TQF+YTAI++W STS
Sbjct: 121 VTSGHLIALEAFVIVLSITQFVYTAIIVWISTS 153

[Close]

BLAST of Sed0020186 vs. ExPASy TrEMBL
Match: A0A6J1IM08 (uncharacterized protein LOC111478636 OS=Cucurbita maxima OX=3661 GN=LOC111478636 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 3.7e-58
Identity = 122/153 (79.74%), Postives = 138/153 (90.20%), Query Frame = 0


Query: 1   MKAVAASILFINFCICIVIFGIGGWVMNRTIDNGFVIGVDLEVPPYFSPIFFQIGNSATG 60
           M+A+AASI F NFCI ++IFGIGGWVMN +IDNGFVIG + EVP YFSPIFFQIGN+ATG
Sbjct: 1   MEAIAASISFFNFCISVIIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATG 60

Query: 61  FFVVFALIAAVAVVASVLSGSFYFRFSDHSNLPSAASTALVAWFLTLLAMGFAWKEIALT 120
           FFVVFALIAAVA VASV+SGSFYFRFS+ +NLP AAS+AL+A FLT LAMGFAWKEI+ T
Sbjct: 61  FFVVFALIAAVATVASVISGSFYFRFSNPNNLPPAASSALIACFLTFLAMGFAWKEISQT 120

Query: 121 VNSGHLIALEAFLIILSVTQFIYTAIMMWTSTS 154
           V S HL+ALEAFLIILSVTQFIYTAI++WTSTS
Sbjct: 121 VTSEHLMALEAFLIILSVTQFIYTAIIVWTSTS 153

[Close]

BLAST of Sed0020186 vs. TAIR 10
Match: AT1G29520.1 (AWPM-19-like family protein )

HSP 1 Score: 158.3 bits (399), Expect = 4.9e-39
Identity = 81/145 (55.86%), Postives = 108/145 (74.48%), Query Frame = 0


Query: 1   MKAVAASILFINFCICIVIFGIGGWVMNRTIDNGFVIGVDLEVPPYFSPIFFQIGNSATG 60
           +K VA+ +L +NFC+ +++ GIGGW MNR ID+GF +G +LE+P +FSPI+F +GN+ATG
Sbjct: 6   IKPVASGLLVLNFCMYVIVLGIGGWAMNRAIDHGFEVGPNLELPAHFSPIYFPMGNAATG 65

Query: 61  FFVVFALIAAVAVVASVLSGSFYFRFSDHSNLPSAASTALVAWFLTLLAMGFAWKEIALT 120
           FFV+FAL+A V   AS +SG  + R     +LP+AA+ A +AW LT+LAMGFAWKEI L 
Sbjct: 66  FFVIFALLAGVVGAASTISGLSHIRSWTVGSLPAAATAATIAWTLTVLAMGFAWKEIELQ 125

Query: 121 VNSGHLIALEAFLIILSVTQFIYTA 146
             +  L  +EAFLIILSVTQ IY A
Sbjct: 126 GRNAKLRTMEAFLIILSVTQLIYIA 150

[Close]

BLAST of Sed0020186 vs. TAIR 10
Match: AT5G46530.1 (AWPM-19-like family protein )

HSP 1 Score: 145.6 bits (366), Expect = 3.3e-35
Identity = 77/145 (53.10%), Postives = 104/145 (71.72%), Query Frame = 0


Query: 1   MKAVAASILFINFCICIVIFGIGGWVMNRTIDNGFVIGVDLEVPPYFSPIFFQIGNSATG 60
           MK VA+ +L +NFC+  ++ GIG W MN+ I++GF+IG D  +P +FSPI F +GN+ATG
Sbjct: 6   MKPVASFLLVLNFCMYAIVLGIGAWSMNKAINHGFLIGADYSLPAHFSPIHFPMGNAATG 65

Query: 61  FFVVFALIAAVAVVASVLSGSFYFRFSDHSNLPSAASTALVAWFLTLLAMGFAWKEIALT 120
           FF++FALIA VA  ASV+SG  + +    ++LP+A S A +AW LTLLAMGF  KEI L 
Sbjct: 66  FFIMFALIAGVAGAASVISGISHLQSWTTTSLPAAVSAATIAWSLTLLAMGFGCKEIELG 125

Query: 121 VNSGHLIALEAFLIILSVTQFIYTA 146
           + +  L  +EAFLIILS TQ +Y A
Sbjct: 126 MRNARLRTMEAFLIILSATQLLYIA 150

[Close]

BLAST of Sed0020186 vs. TAIR 10
Match: AT5G18970.1 (AWPM-19-like family protein )

HSP 1 Score: 91.7 bits (226), Expect = 5.7e-19
Identity = 59/143 (41.26%), Postives = 81/143 (56.64%), Query Frame = 0


Query: 2   KAVAASILFINFCICIVIFGIGGWVMNRTIDNGFVIGVDLEVPPYFSPIFFQIGNSATGF 61
           K+ A  +L +N  +  VI  I  W +N  I+        L +P    PI+F +GN ATGF
Sbjct: 7   KSAAFMLLMLNLGLYFVITIIASWAVNHGIERTRESASTLSLPAKIFPIYFPVGNMATGF 66

Query: 62  FVVFALIAAVAVVASVLSGSFYFRFSDHSNLPSAASTALVAWFLTLLAMGFAWKEIALTV 121
           FV+F LIA V  +A+ L+G       D  NL SAA+++L++W LTLLAMG A KEI +  
Sbjct: 67  FVIFTLIAGVVGMATSLTGIINVLQWDSPNLHSAAASSLISWSLTLLAMGLACKEINIGW 126

Query: 122 NSGHLIALEAFLIILSVTQFIYT 145
              +L  LE   II+S TQ + T
Sbjct: 127 TEANLRTLEVLTIIVSATQLLCT 149

[Close]

BLAST of Sed0020186 vs. TAIR 10
Match: AT1G04560.1 (AWPM-19-like family protein )

HSP 1 Score: 77.0 bits (188), Expect = 1.4e-14
Identity = 54/145 (37.24%), Postives = 86/145 (59.31%), Query Frame = 0


Query: 4   VAASILFINFCICIVIFGIGGWVMNRTIDNGFVIGVDLEVPPYFSPIFFQIGNSATGFFV 63
           +AA +LF+N  + +++ G   W +N+ I NG          P F       GN AT FF+
Sbjct: 9   IAAPLLFLNLVMYLIVLGFASWCLNKYI-NG------QTNHPSFG------GNGATPFFL 68

Query: 64  VFALIAAVAVVASVLSGSFYFRFSDHSNLPSAASTALVAWFLTLLAMGFAWKEIALTVNS 123
            F+++AAV  VAS L+G+ + RF  + +L +A ++++VAW +T LAMG A K+I +    
Sbjct: 69  TFSILAAVVGVASKLAGANHIRFWRNDSLAAAGASSIVAWAITALAMGLACKQINIGGWR 128

Query: 124 G-HLIALEAFLIILSVTQFIYTAIM 148
           G  L  +EAF+IIL+ TQ +Y  ++
Sbjct: 129 GWRLKMIEAFIIILTFTQLLYLMLI 140

The following BLAST results are available for this feature:

BLAST of Sed0020186 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882133.1	3.5e-63	86.18	uncharacterized protein LOC120073380 isoform X2 [Benincasa hispida]	[more]
KAA0052579.1	1.5e-61	83.01	AWPM-19-like protein [Cucumis melo var. makuwa]	[more]
TYK13246.1	1.5e-61	83.01	uncharacterized protein E5676_scaffold255G008640 [Cucumis melo var. makuwa]	[more]
XP_008439689.1	3.3e-61	82.35	PREDICTED: uncharacterized protein LOC103484407 [Cucumis melo]	[more]
XP_004134640.1	2.4e-59	79.08	uncharacterized protein LOC101209586 [Cucumis sativus] >KGN49356.1 hypothetical ...	[more]

BLAST of Sed0020186 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6L4D2	9.4e-11	35.37	Membrane protein PM19L OS=Oryza sativa subsp. japonica OX=39947 GN=PM19L PE=2 SV...	[more]

BLAST of Sed0020186 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UGF2	7.1e-62	83.01	AWPM-19-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120...	[more]
A0A5D3CS83	7.1e-62	83.01	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3AZB2	1.6e-61	82.35	uncharacterized protein LOC103484407 OS=Cucumis melo OX=3656 GN=LOC103484407 PE=...	[more]
A0A0A0KNQ2	1.1e-59	79.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G521030 PE=4 SV=1	[more]
A0A6J1IM08	3.7e-58	79.74	uncharacterized protein LOC111478636 OS=Cucurbita maxima OX=3661 GN=LOC111478636...	[more]

BLAST of Sed0020186 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29520.1	4.9e-39	55.86	AWPM-19-like family protein	[more]
AT5G46530.1	3.3e-35	53.10	AWPM-19-like family protein	[more]
AT5G18970.1	5.7e-19	41.26	AWPM-19-like family protein	[more]
AT1G04560.1	1.4e-14	37.24	AWPM-19-like family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008390	AWPM-19-like	PFAM	PF05512	AWPM-19	coord: 10..147 e-value: 9.6E-44 score: 149.0
IPR008390	AWPM-19-like	PANTHER	PTHR33294	AWPM-19-LIKE FAMILY PROTEIN	coord: 1..151
None	No IPR available	PANTHER	PTHR33294:SF6	AWPM-19-LIKE FAMILY PROTEIN	coord: 1..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0020186.1	Sed0020186.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane