![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Sed0020171 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGATAGTTTCAGATGGAGATTCAGAAGCCTACATTACCATGTTTGATGCTGCTGAGCATTTAACAAGTTGTAATGTGGTTGAGTATTTCAATGATCTATCTCAAGTAAGTTTTACATTTAAAACTAAGTTTTATAAACATTCAATTACGTAAATGTCATCCATTATATATTTGTATGCATAAATATTACATAATATGCTTTTTTTTTCTTATTAGGTTCAAAACAAGGAAAGTAGTGAATATTATCAAAACTTGGTTTTAGCTGAAGATAAGAAATACTACTTCTTGGTTAGATTGAACAAGGATGGAGAAAGAGATAGAGCACGCCGTCAAATTGTTGTTCAAGAGATATGCACAATCAATTTAATGGCAGAAAAGAAGTTTCCAATGAACAAAAATAAAGGAAAAAATGCCTTAGAAGAAGTCGAGAATGCCAATAATAAAAAGGCTAAAATTGAAGTTTAG ATGATAGTTTCAGATGGAGATTCAGAAGCCTACATTACCATGTTTGATGCTGCTGAGCATTTAACAAGTTGTAATGTGGTTGAGTATTTCAATGATCTATCTCAAGTTCAAAACAAGGAAAGTAGTGAATATTATCAAAACTTGGTTTTAGCTGAAGATAAGAAATACTACTTCTTGGTTAGATTGAACAAGGATGGAGAAAGAGATAGAGCACGCCGTCAAATTGTTGTTCAAGAGATATGCACAATCAATTTAATGGCAGAAAAGAAGTTTCCAATGAACAAAAATAAAGGAAAAAATGCCTTAGAAGAAGTCGAGAATGCCAATAATAAAAAGGCTAAAATTGAAGTTTAG ATGATAGTTTCAGATGGAGATTCAGAAGCCTACATTACCATGTTTGATGCTGCTGAGCATTTAACAAGTTGTAATGTGGTTGAGTATTTCAATGATCTATCTCAAGTTCAAAACAAGGAAAGTAGTGAATATTATCAAAACTTGGTTTTAGCTGAAGATAAGAAATACTACTTCTTGGTTAGATTGAACAAGGATGGAGAAAGAGATAGAGCACGCCGTCAAATTGTTGTTCAAGAGATATGCACAATCAATTTAATGGCAGAAAAGAAGTTTCCAATGAACAAAAATAAAGGAAAAAATGCCTTAGAAGAAGTCGAGAATGCCAATAATAAAAAGGCTAAAATTGAAGTTTAG MIVSDGDSEAYITMFDAAEHLTSCNVVEYFNDLSQVQNKESSEYYQNLVLAEDKKYYFLVRLNKDGERDRARRQIVVQEICTINLMAEKKFPMNKNKGKNALEEVENANNKKAKIEV Homology
BLAST of Sed0020171 vs. NCBI nr
Match: KGN51395.1 (hypothetical protein Csa_008714 [Cucumis sativus]) HSP 1 Score: 71.2 bits (173), Expect = 6.5e-09 Identity = 34/58 (58.62%), Postives = 44/58 (75.86%), Query Frame = 0
BLAST of Sed0020171 vs. NCBI nr
Match: OIT08014.1 (hypothetical protein A4A49_30234 [Nicotiana attenuata]) HSP 1 Score: 61.6 bits (148), Expect = 5.1e-06 Identity = 41/119 (34.45%), Postives = 68/119 (57.14%), Query Frame = 0
BLAST of Sed0020171 vs. NCBI nr
Match: XP_020242412.1 (replication protein A 70 kDa DNA-binding subunit B-like [Asparagus officinalis]) HSP 1 Score: 61.6 bits (148), Expect = 5.1e-06 Identity = 42/126 (33.33%), Postives = 61/126 (48.41%), Query Frame = 0
BLAST of Sed0020171 vs. NCBI nr
Match: XP_016476407.1 (PREDICTED: replication protein A 70 kDa DNA-binding subunit B-like [Nicotiana tabacum]) HSP 1 Score: 61.2 bits (147), Expect = 6.7e-06 Identity = 30/78 (38.46%), Postives = 49/78 (62.82%), Query Frame = 0
BLAST of Sed0020171 vs. NCBI nr
Match: XP_020268430.1 (uncharacterized protein LOC109843879 [Asparagus officinalis]) HSP 1 Score: 60.1 bits (144), Expect = 1.5e-05 Identity = 41/126 (32.54%), Postives = 60/126 (47.62%), Query Frame = 0
BLAST of Sed0020171 vs. ExPASy TrEMBL
Match: A0A0A0KP46 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G526360 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 3.1e-09 Identity = 34/58 (58.62%), Postives = 44/58 (75.86%), Query Frame = 0
BLAST of Sed0020171 vs. ExPASy TrEMBL
Match: A0A1J6IT36 (Rep_fac-A_C domain-containing protein OS=Nicotiana attenuata OX=49451 GN=A4A49_30234 PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 2.5e-06 Identity = 41/119 (34.45%), Postives = 68/119 (57.14%), Query Frame = 0
BLAST of Sed0020171 vs. ExPASy TrEMBL
Match: A0A1S4AI89 (replication protein A 70 kDa DNA-binding subunit B-like OS=Nicotiana tabacum OX=4097 GN=LOC107797997 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 3.3e-06 Identity = 30/78 (38.46%), Postives = 49/78 (62.82%), Query Frame = 0
BLAST of Sed0020171 vs. ExPASy TrEMBL
Match: A0A1S4CG46 (replication protein A 70 kDa DNA-binding subunit A-like OS=Nicotiana tabacum OX=4097 GN=LOC107818567 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 1.2e-05 Identity = 28/85 (32.94%), Postives = 50/85 (58.82%), Query Frame = 0
BLAST of Sed0020171 vs. ExPASy TrEMBL
Match: A0A5P1F312 (Uncharacterized protein OS=Asparagus officinalis OX=4686 GN=A4U43_C04F3900 PE=3 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 2.1e-05 Identity = 31/78 (39.74%), Postives = 46/78 (58.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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