Sed0020166 (gene) Chayote v1

Overview


Name	Sed0020166
Type	gene
Organism	Sechium edule (Chayote v1)
Description	RAB GTPase homolog A4D
Location	LG03: 17004431 .. 17012660 (+)
RNA-Seq Expression	Sed0020166
Synteny	Sed0020166

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAGATGTTGTTACGATCGGGAAACGGGAATTTTGTTTGAGTTGTTGTAATGTTGTGTGAATCGTCTGATCTGCGCGTTTTATAGGGAATTTTTTTGAAAACAAGATAAAATGTCGAATCTATATGGGGATTATAATCAACAGAGTGAGTATGTTTTCAAAGTTGTGTTGATCGGAGATTCAGCTGTAGGCAAAACCCAACTCCTTGCCAGATTCTCACGAAATGAATTTAGTCTCGATTCGAAAGCTACTATCGGAGTCGAGTTTAAGACGAAAACTCTGATTATTGATCAGAAAACCGTAAATGCCCAGATATGGGATACTGCTGGACAAGAAAGGTATTTGTCCCCTTTTCTTTGTGTGTTTAATTGTTCTTGTTTTGTTCATGATTTATACAAATGTGCTGTTCAGCTTTGTTGTAATTCGTAGATGGAATCAAAATAGAATCAAACAGCAAACACTTCTAAAGCCTCCAATATAATTGAAACTCTCTTTTGTTTGTTGTTTCCTCTGTAATAACAAATCCAGAGAGAATGCTAATATATATCCGTCTTTGAATATAGTTGTGGTGATTGGAATTAGAATTTTTAGCTTTGCTCATCTGGGGGCAATCCATCCTTCAACTTAGGCATCAAAATACATCATAGGACCGGAATCAAAATTGGGGGCGCCTGGGAAATCAATTCCCACAATTGCCTCGAACCGGAGACATTGAGGGGGCACACTCCCAAAGCCAGGCATTCGACTACTGCGCCGCCCCCATGAGACACTTTTTATTATTGTATTTGTTATGTCAATCATGGTGAAATATCATCAAAAGTGAAACGTGGTGTTGACATTGACGGCTAGTTGAAGTTATTTCTCACTCATTTTGGAATTGTCCTCCGGCCCCTGCTTACCTTGTGCAGGCTTATTTATTGAAATTACTGTGGTTGGATTGATAAGTGTAGGTTTGTTATGTATGCCTCGAAAAGAAATGAGAGAACGAGTTGCTTAGGAGCTGATGAGATGCATTTGATCTATGTGGGACTCGAGTAGTTCTGAGCAGTGTGCCCCACCTTGCATAATTCATTGATTTTAAGATGGGAATGCAAACACAAGGGGAGTCTGGGGAAGAGATGAAAGAGGTGAGTGAAGTCATGGGGAGATGGGGACCTCTCTTAAGTTAGCCATATTTTGTACTTTTGTTTAGAAGTTTGATACAAACGTGTATTTCCTGTCAAGGAAGATCTATGCAATTTCTATTAGAGCACTCTTTTAGTCATGCCTAGAAGGAGTAGGCTGACTAGTAGATTGGGGAATGAATGTCGAGTTGGACTAATTATCAGTTGTTGAGGAAGCCCGAAGGGTAAGTGGTGGAAAGGGACAACGACATTTGGTCGACGGGATGAATAAGATGCTGAAGCAAACGAAGGAGGAATGAATGGTGATGAATATTATACACCATTTTTAATGAGGGGAAAAGGATTGTTGAACATCTGATCCCAATGACGAATAGAGAGAGACTAGTGTGATCATGAGGAAGTGAGGCATAAGGAACTAACCGCAAGAAGGCTAGAGCTGCCACAATTAAAGGGAGGCGATCGTGAAGCAGTATGCTGGGAGAGGCTGTTGCTTTATATTCCAGGATGGAAATTCGTCAATCTCCATGCACTGACTGGTTCAATCTGGCAAAGGTAGCTCGATTTCTGATGACGTACATGAAGGAGTGCCTATTGAGCATTGTTTTATCTCTGCAATCGCATTGCAGTGTGCACGGGTTAGGAAGATGTCTGAAGCAGCCCCTCTTGCAAACGTACCTGGTAACTATGAGAGTACCAATAGGGAGATATATTATGAATATTAGTAAGGGTATAGTAGTAATTAGTGTCGATATTGGAAAACATTAATAGTATATTAGTATGGGTATAGTTATAATTAGTGAAAAGTAACTTGGTTGCGAAGAGGACTTAGAGTTCATAGAAAGGAGAATAATTTTGTGTATTACCGATGGGGCTTTGAGAAAGAGATAACCCTCTTGAAAGGCTATCATTATATTGCAGTTTGTCTTTGATATTACAATATATTAGTATCCTGTGTCTTCTGTGTTTGGATACCTTTCAATAAGTTGATTAGATACTTCAGAGTAGTAACTTTGTCATTGTGTAAGGTATATACACAAGAACAACATGAACAACAAATAAACATTCAGAAAATACACAAGAACAACAAATAAACAAAGAAGGAGAATTCACAAGATAATAGAAAGAGCAACAAAACATCAACACAAGACCTACAACAAGTTGAGGCGTTTACCACTTCTACAAGATAATTTGCCTACATATTTTGGGGCACCTGTCCAGACCAAAATTCCACACCCAACTAAGTGCCTCGGAGGAGATGCCAACACTCTCGAATTGTTGCAAGTCTTAAAGCTGGTGTTTTGTTCCACTTTCTATTATAGTGAAGCTTGTTAATGAAATATAACTTCTGTTAATATTATAGTCAAGATCCCCCTAGCTAATTATCATTTTGCCCTTACTACTTATTGAATTATGTTAAATCATCGATTAACCCAAAAGCTTAAAATGATGGGTTCGAGTAAATTTAATTATATCATCAACATTCCCTATCACTTGTGGACTTTGAAAGTTGAGAAAAGCCCTAAAAGTGGAATTCAATTTTTTTTGGGCATGAAATGACTTGACATGCGCTCAAACTCAAAACTTCCTGCCCTGATACCATGTCGAATTATGTTGAATCACCCACCCAGGGTTGATTGGTGATTTAACATAATTAAACACAAACACTACTGTTCTTGAATACCCTAGAACCCTTATACTTGGTTAAGGGCTTAGAATCATTGGTGGAGATGGCCTAGTTCTCTGTCTCATAATCCAACTTAGCTCACGCTATTGTGCTTTGTTTGTGTACTTTAAGTACTAATTCAGTGGATTGACAGAGAAACCGAGGACGCCTCAGGAAAACCCTTTTGACTTGCTGCAACACCTGTTGCCTTTGATCTCTACCTTTAGGAAAAGGTGGAAGTTTGAACGGGTCTTGATAGAATTAAAGAGCCACAACTTTGATGTTCCCAGACATAGAAAACTAAAAGATATCTATATATTACGTTGGTTTATGTTTATTTTAGTATTTTAATATTTTTATTTTTTTAATTATGTTTTCCTTTTAGCATCAGGTTAAATCTTATTTTCTCCTTTTATGATTAGGTTAGATATAATCTTTTCTTTTTATGATTAAGTTATCTCTTGTAGTATACTTAAACCTTATGTTGGGTTCATTATTAAATGAAGAATTTGAATTTCATCGTCCCCAAGGGTGTGATAAGGTTGGGCCTAGGGCTTGGTTGGGCCTATGACTCTATTTAGCCATTACTTGGAGCATAAGTTAGTATTTTGTTATAAATAGAATGGGTTAGATTAGAGTTTAGGCATCCAATTGTTAAATGAGTTATTGAGTGATTTATTGTAGGGCTCAAGAGATTCTCTTGGTTCCAAGTTCCTATCAAACTTGGTTTATCTTTATTCTTTTATCTTTTGATATAATCTAGATCCTGGATCATATAAGAGTGGTGCAGTGGTTGAAGGCTTGAGTTTTGAGGATATGCTCCCCTCAAGGCCCTAGGTTCTAAACTCACATGTGACATTAATCCTTCCATGTCTCCAGTGTCTGACCTAGAAAAGGGCGTGATTACCATATTTCAAAAAAAGAATTCCATTTTTCAATATTAATATCACATAAATATTGTAATATATAATTATATCCTTTCGAGAGGACTATCTCTCCCAAGTCCTAGATGAACAATCCACTAAACTTATTGATACCTTGAAACGTTCCTAACACTCATTAGCTATAACCAAGACATACCTGATTATTTATCATATCACTACGCTCACACTACTATTCTACCAATACTTCAATCTATCCTCTATTAGTAATAGAGTAATTTACCTGGATGTGTAGAGTGAGTATGCTTATTGTACATGTGGCACAAGTATTTGCCACATATCTATTTAGTTTTTCAATATTTTTATTAATTTTGTGTTTTAATATGTGGTAATATTTGTGCCACATAGGCAATAAGTATACTTACCCTACACATCCATGTGTAGGTAAGTATTAATCTCAATAATATCACATTCGATTTATGCATTCAAGGAGGAAGATGAGAGAATTGGGTAAAGTTCTAAAGCTAATCAGAAGAGTGTGAGTTTTTAAGGACGTAGTTAGTAGCAACGAGGTGCGCCATTTTGTTATTTCGTCATCATTAGATGGGAACACAAACGTGAGGGGAGTGAGTAGGCATAAATGTGTAAGAAGAGAAAGGAGAAAGTTAAGGAAAATTTGAGGGAAATCGAGGAATGTTGTAGATCTCTCAAAGTCTGTTACCTTACCTTAAGTTCTTTCGTTTAGAAGGTCATAGAAAGAAACTGTGGGAAATTAGCAGTCCATTTAATCGGCTTGTAGATTGTTAAGAACTGTTGGTTTTTAATTTGCTAGTGAACGAGATATCTAGGGTGAAATATTAATGGTGTAAAATGCATAACTTATAAATTAAGAAAAAAATAGGCAACAGATTTTGATACGATCCGGACCTTGGAGTTTTTAGGAATGTTAGTATTAGTATTTATTATTTATTAATTAATTGTTATTTCAATTGTATTGGGCTTTTGGGCCTTATTAGAGATTATTATTCAATTAGGTTATTTTGGGGTTTACTTGGGGAGCAAGTAAAAGGCTAGGGTTTAGAGTTATTATAAATAGGAGAGGTTAGGTCTTTATTATGCATCCAATTGAATTGTCATCTATGTACTTTGGCTCTTTGAGAGATTCTCGAGAGAGATTTATCGTAGTTTAATATAAAATTGTGGTAGATTCTATCATTTTGATATTAGAGTCGTTTGCCAATCCGGGAATGGTGACTACTAAGATGGAAACAAGGATGCAAGAGTGTGAAGAGGGAATGGCCGACTTGGCGAGGAAGTTACAGGAAACGAACACAAAGATGGAATTGATGGAAGAACGATTGGGAAAAAAGATAGATGCACAGGATTTGAAGTTCGAGGCGATAAACCGAAAGTTGGAACTGCTAATGGAATCGATCTGAGCTGACAAAGGGAAAGGATTAATGGTCGAAGGCTCAGAGGAAGGGTCGGGTGGTGCTACTGTTGCGGGTGGGGAGGCTGCAGCGGGAGCGAGGGCAGTTGAGATGGGGGCGATCGGTGGGGCAAAGCACGTAGGGGCGGAGGCCTCGTCGGGAGGAGGTGACACGGTCTGGCAGGGAGTGGGCGCGGGCGTGGGGTGCGGGGGAGCGGACACGAGCTCGGGGCGCGGGGGCGTGAACGCGAGCGTGGGGCATGGGGGCACAGAGTGGGGACACGGAACCGAGGGTAGAAGTGGCACGGAGGGGCGCACCGGCGTGGTAGCGATGGGCGCCCGTGCAAGGGGCTGGTGCGGGGAGAGAGGGGTAGGAGCGGGGTTGGGCGGGGGAGGTCTCGGTTGGGGCGGACCTAGCGCGAGCGGCGGTGGGCTGGGCTGGGGCGGCTGCGGCTTCGGTGGGTCGACCGAGGGCGCGGGTGGTGGTGGATCGGGTCGGGGTGGGCTAACTGGATCGAGTGGGTCCTGGCTAGTCGGGTTGGACCAGAGAGATGGGTTCCAAGGGCCTGGGGATGGGGAAAGGTTTATGGGGCCGGACATCAATCGAAGGGAGGACCCACGGTTTGACGGATGGGGAAACGGTTTCCCAGAAGATAGGAGGGTGCGTATTGGTTACGACAGACCGATAGCGCATGACGGTTGGAATGATCGAGGCCAAAATTGGGTTGATGATTTACCGGGACTAGAGTTCGGCCAAAGGGGAGATCTAAGGATCGTGGGGAGAGAAAATAGGGTTCTGGAGGAGAGGAGGTTGTGCATGGGCTATGATAGGTCGTTGGCGCATGACGGTTGGAACGATAGGGGGTGGAGTGACAAAGTCCGAAATAGGGGACGAGTTTTCGGGTGGGGAGGAGAAGAAAGATTTGAACGGGGAAGTCAGAGAGTAGGAGGAAGGGAGGGACCGGGATGTGACAGGAGATTCAGGAAATTGGAGATGTTGGTTTTCAAGGGTCTTGCTGACGAGGATCCCGTGGGATGGTTAAGTCGGGTCGAGCATTAATTCCTGGTAAACAAGCTGACTGAATATGAAGGGGTTGAGGCAGCAGGGTTATGTTTAAAATGGGAGGCATTGGAGTGGCTTCAGTATGAGGAGGATCGTGCTCTTTTTCGTTCCTGGAACGAATTCAAAGATGGGTTGTTGGAGCATTTCCAACCGGCGGCTCAGGCAAATAAGTATGCCAACTTCATGAGTTTGAAGCAAATAGGTACGGTGAAGGAATATCGTCGGAGTTTTGAGCGCTTTGCTAAGAGAATGCACGATATCAGTGCGAGTGCATTGGAGGGGAAGTGGGAAAGTGGACTAAAAGAGGAGATACAGAGCGCAATGCGTAAACTGCAGCCAGTGGGCATCGAAGAGAAAATGTTTATGGCCCAAGTGATTGAGGATGATTTTGCTTTTCAGGCTGCCCAAAATGAGGGAAGTACTTCTGCAACGGTCAAGGCTAAAGCAGGAACGATTGTTTCGGGAACTGGAAGCACAGAGACTCTTTCTCACAAGACTACAACCATTCACCCCGCGTCCTGTAAAAAACTCACTGAAGCCGAAATTCGAGCACGGAAGGATAAAGTGTTATGATTCCATTGTGATGAACGATTTGTCCCAAGACATCGTTGTCAGAAGAAAGAGCTCCAGAATTTGGATGTGTGGGTCGTTCGGGATGCGCACGATTACCAGGATGTTGATGTGACTGACTTTTCGCCAGAAGATGGAGCTGCAGAAGGTGGCATCGGAGATGGAACACCTTGAGGACAAGGTGGCTCTTGGGGGGGAAAGTATTGATATGATCCGGACCTTGGAGTTGTTAGGAATATTAGTATTAGTATTTATTATTTATTAATTAATTGTTATTTCAATTGTATTGGGCTTTTGGACCTTATTAGAGATTATTATTCAATTAGGTTATTTTGGGGTTTACTTGGGGAGCAAGTAAAAGGCTAGAGTTTAGAGTTATTATAAATAGGAGAGGTTAGGTCTTTGTTATGCATCCAATTGAATTGTCATCTATGTACTCTGGCTCTTTGAGAGATTCTCTCGAGAGATTTATCGTAGTTTAATATAAATTTGTGGTAGATTCTATCAGATTTCTAAAGATTAACATGTTGGCTTTAATACATATAATTAAATCCCTTCAGTTAGATTTGTGATTGAGTAATGATATCTTGTCTCCTATCAATGGAAAAGGAGTAATTTTCTGTATTCATCACTTTTTTATCTGAGTTTTCTGAAATAGATGGATTATATTGATGAGATCCTTTTATTATCCCTCAAACAACGTATTGTGCCTTTAAGTTTATATGCCCTTAAGCTTGTAGTTAAACAGATTCATTGATATCTTGGCTCCTATCAACATATGCTCTTAAGGCTTTCCATCTAGTTGTAGATATCAAAACTGACCAATGAAATTTGCTTCTTTACATACTACATTTGATGCTTGCAAATATTTAGGCTGCTATTCGGCTCAAAAAGTTGTATTTATGTACTGGTGAGGTTGTTCTTGTTTGATTTGTCAACAGATTCAACATCATATCTGATGAAATAAGGTTTAGAAAGTCTGTTGTTATGGACTTAAATTGTGAAGGTTAACGTTAAGTTGGTTATAGTTTATTATCTTGTTTTCCCTATTCCCAGGTACAGAGCAGTGACAAGTGCTTACTACAGAGGTGCAGTGGGAGCAATGCTCGTTTACGATATGACGAAGCGCCAGTCATTCGACCACATGGCAAGATGGTTAGAGGAACTAAGAGGACATGCTGATAAGAACATCGTCATAATGCTGATCGGAAACAAAAGCGACCTAGGAAGCCTTCGAGCAGTACCAGTAGAGGATGCACAAGAGTTTGCTGAAAGAGAAAACCTGTTCTTCATGGAGACTTCGGCTCTGGAGTCGACAAACGTCGAAACAACATTCTTCACTATTCTAACAGAGATATATAGAATAATCAGCAAGAAGAGCCTTGCAGCTGGAGAAGAGATAGGTATCGGTACAAATCCAGCCCTGTTAAGAGGGACTAGTATAGTTGTTCCTGGACAGGACCAGGATCCTGAGAGAAAAGGGTGTTGCTTTGCCTCATGA

mRNA sequence

CCAGATGTTGTTACGATCGGGAAACGGGAATTTTGTTTGAGTTGTTGTAATGTTGTGTGAATCGTCTGATCTGCGCGTTTTATAGGGAATTTTTTTGAAAACAAGATAAAATGTCGAATCTATATGGGGATTATAATCAACAGAGTGAGTATGTTTTCAAAGTTGTGTTGATCGGAGATTCAGCTGTAGGCAAAACCCAACTCCTTGCCAGATTCTCACGAAATGAATTTAGTCTCGATTCGAAAGCTACTATCGGAGTCGAGTTTAAGACGAAAACTCTGATTATTGATCAGAAAACCGTAAATGCCCAGATATGGGATACTGCTGGACAAGAAAGGTACAGAGCAGTGACAAGTGCTTACTACAGAGGTGCAGTGGGAGCAATGCTCGTTTACGATATGACGAAGCGCCAGTCATTCGACCACATGGCAAGATGGTTAGAGGAACTAAGAGGACATGCTGATAAGAACATCGTCATAATGCTGATCGGAAACAAAAGCGACCTAGGAAGCCTTCGAGCAGTACCAGTAGAGGATGCACAAGAGTTTGCTGAAAGAGAAAACCTGTTCTTCATGGAGACTTCGGCTCTGGAGTCGACAAACGTCGAAACAACATTCTTCACTATTCTAACAGAGATATATAGAATAATCAGCAAGAAGAGCCTTGCAGCTGGAGAAGAGATAGGTATCGGTACAAATCCAGCCCTGTTAAGAGGGACTAGTATAGTTGTTCCTGGACAGGACCAGGATCCTGAGAGAAAAGGGTGTTGCTTTGCCTCATGA

Coding sequence (CDS)

ATGTCGAATCTATATGGGGATTATAATCAACAGAGTGAGTATGTTTTCAAAGTTGTGTTGATCGGAGATTCAGCTGTAGGCAAAACCCAACTCCTTGCCAGATTCTCACGAAATGAATTTAGTCTCGATTCGAAAGCTACTATCGGAGTCGAGTTTAAGACGAAAACTCTGATTATTGATCAGAAAACCGTAAATGCCCAGATATGGGATACTGCTGGACAAGAAAGGTACAGAGCAGTGACAAGTGCTTACTACAGAGGTGCAGTGGGAGCAATGCTCGTTTACGATATGACGAAGCGCCAGTCATTCGACCACATGGCAAGATGGTTAGAGGAACTAAGAGGACATGCTGATAAGAACATCGTCATAATGCTGATCGGAAACAAAAGCGACCTAGGAAGCCTTCGAGCAGTACCAGTAGAGGATGCACAAGAGTTTGCTGAAAGAGAAAACCTGTTCTTCATGGAGACTTCGGCTCTGGAGTCGACAAACGTCGAAACAACATTCTTCACTATTCTAACAGAGATATATAGAATAATCAGCAAGAAGAGCCTTGCAGCTGGAGAAGAGATAGGTATCGGTACAAATCCAGCCCTGTTAAGAGGGACTAGTATAGTTGTTCCTGGACAGGACCAGGATCCTGAGAGAAAAGGGTGTTGCTTTGCCTCATGA

Protein sequence

MSNLYGDYNQQSEYVFKVVLIGDSAVGKTQLLARFSRNEFSLDSKATIGVEFKTKTLIIDQKTVNAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKSDLGSLRAVPVEDAQEFAERENLFFMETSALESTNVETTFFTILTEIYRIISKKSLAAGEEIGIGTNPALLRGTSIVVPGQDQDPERKGCCFAS

Homology

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BLAST of Sed0020166 vs. NCBI nr
Match: XP_004150166.1 (ras-related protein RABA4d [Cucumis sativus] >KGN53823.1 hypothetical protein Csa_014745 [Cucumis sativus])

HSP 1 Score: 412.1 bits (1058), Expect = 3.0e-111
Identity = 207/223 (92.83%), Postives = 214/223 (95.96%), Query Frame = 0


Query: 1   MSNLYGDYNQQSEYVFKVVLIGDSAVGKTQLLARFSRNEFSLDSKATIGVEFKTKTLIID 60
           MSNLYGDYNQ+ +YVFKVVLIGDSAVGKTQLLARFSRNEFS+DSKATIGVEF+TKTL+ID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVNAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTV AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLGSLRAVPVEDAQEFAERENLFFMETSALESTNVETTFFTILTEIYRII 180
           IVIMLIGNK DLGSLRAVP EDAQEFAERENLFFMETSALESTNVET FFTILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180

Query: 181 SKKSLAAGEEIGIGTNPALLRGTSIVVPGQDQDPERKGCCFAS 224
           SKKSLAAGEEI IG+NPAL +GTSIVVPGQDQD  RKGCCFAS
Sbjct: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS 223

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BLAST of Sed0020166 vs. NCBI nr
Match: XP_038881448.1 (ras-related protein RABA4d [Benincasa hispida])

HSP 1 Score: 409.5 bits (1051), Expect = 1.9e-110
Identity = 205/223 (91.93%), Postives = 213/223 (95.52%), Query Frame = 0


Query: 1   MSNLYGDYNQQSEYVFKVVLIGDSAVGKTQLLARFSRNEFSLDSKATIGVEFKTKTLIID 60
           MSNLYGDYNQ+ +YVFKVVLIGDSAVGKTQLLARFSRNEFS+DSKATIGVEF+TKTL+ID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVNAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTV AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLGSLRAVPVEDAQEFAERENLFFMETSALESTNVETTFFTILTEIYRII 180
           IVIMLIGNK DLGSLRAVP EDAQEFAERENLFFMETSALESTNVET FFTILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180

Query: 181 SKKSLAAGEEIGIGTNPALLRGTSIVVPGQDQDPERKGCCFAS 224
           SKKSLAAGEEI IG+NP L +GT+IVVPGQDQD  RKGCCFAS
Sbjct: 181 SKKSLAAGEEIDIGSNPGLFKGTNIVVPGQDQDSGRKGCCFAS 223

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BLAST of Sed0020166 vs. NCBI nr
Match: XP_008460801.1 (PREDICTED: ras-related protein RABA4d [Cucumis melo] >KAA0053214.1 ras-related protein RABA4d [Cucumis melo var. makuwa])

HSP 1 Score: 408.7 bits (1049), Expect = 3.3e-110
Identity = 205/223 (91.93%), Postives = 213/223 (95.52%), Query Frame = 0


Query: 1   MSNLYGDYNQQSEYVFKVVLIGDSAVGKTQLLARFSRNEFSLDSKATIGVEFKTKTLIID 60
           MSNLYGDYNQ+ +YVFKVVLIGDSAVGKTQLLARFSRNEFS+DSKATIGVEF+TKTL+ID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVNAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTV AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLGSLRAVPVEDAQEFAERENLFFMETSALESTNVETTFFTILTEIYRII 180
           IVIMLIGNK DLGSLRAVP EDAQEFAERENLFFMETSALESTNVET FFTILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180

Query: 181 SKKSLAAGEEIGIGTNPALLRGTSIVVPGQDQDPERKGCCFAS 224
           SKKSLAAGEEI IG+NPAL +GT+IVVPGQDQD   KGCCFAS
Sbjct: 181 SKKSLAAGEEIDIGSNPALFKGTNIVVPGQDQDSGTKGCCFAS 223

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BLAST of Sed0020166 vs. NCBI nr
Match: XP_022925137.1 (ras-related protein RABA4d [Cucurbita moschata] >XP_023518611.1 ras-related protein RABA4d [Cucurbita pepo subsp. pepo] >KAG7027618.1 Ras-related protein RABA4d [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 401.7 bits (1031), Expect = 4.0e-108
Identity = 202/223 (90.58%), Postives = 210/223 (94.17%), Query Frame = 0


Query: 1   MSNLYGDYNQQSEYVFKVVLIGDSAVGKTQLLARFSRNEFSLDSKATIGVEFKTKTLIID 60
           MSNLYGDYNQ+ +YVFKVVLIGDSAVGKTQLL+RFSRNEFS+DSKATIGVEF+TKTL+ID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVNAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTV AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLGSLRAVPVEDAQEFAERENLFFMETSALESTNVETTFFTILTEIYRII 180
           IVIMLIGNK DLGSLRAVP EDAQEFAERENLFFMETSALESTNVET FF ILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180

Query: 181 SKKSLAAGEEIGIGTNPALLRGTSIVVPGQDQDPERKGCCFAS 224
           SKKSLAAGE I IG NPAL +GT+IVVPGQDQ   RKGCCFAS
Sbjct: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQDQAGGRKGCCFAS 223

[Close]

BLAST of Sed0020166 vs. NCBI nr
Match: XP_022966454.1 (ras-related protein RABA4d [Cucurbita maxima])

HSP 1 Score: 400.2 bits (1027), Expect = 1.2e-107
Identity = 201/223 (90.13%), Postives = 210/223 (94.17%), Query Frame = 0


Query: 1   MSNLYGDYNQQSEYVFKVVLIGDSAVGKTQLLARFSRNEFSLDSKATIGVEFKTKTLIID 60
           MSNLYGDYNQ+ +YVFKVVLIGDSAVGKTQLL+RFSRNEFS+DSKATIGVEF+TKTL+ID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVNAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTV AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLGSLRAVPVEDAQEFAERENLFFMETSALESTNVETTFFTILTEIYRII 180
           IVIMLIGNK DLGSLRAVP EDAQEFAERENLFFMETSALESTNVET FF ILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180

Query: 181 SKKSLAAGEEIGIGTNPALLRGTSIVVPGQDQDPERKGCCFAS 224
           SKKSLAAGE I IG NPAL +GT+IVVPGQ+Q   RKGCCFAS
Sbjct: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQEQAGGRKGCCFAS 223

[Close]

BLAST of Sed0020166 vs. ExPASy Swiss-Prot
Match: Q9LH50 (Ras-related protein RABA4d OS=Arabidopsis thaliana OX=3702 GN=RABA4D PE=1 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 1.2e-99
Identity = 182/220 (82.73%), Postives = 200/220 (90.91%), Query Frame = 0


Query: 1   MSNLYGDYNQQSEYVFKVVLIGDSAVGKTQLLARFSRNEFSLDSKATIGVEFKTKTLIID 60
           MSNLYGDYNQ+ +YVFKVVLIGDSAVGKTQLLARF+RNEFS+DSKATIGVEF+TKTL+ID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVNAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            KTV AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMA+WLEELRGHADKN
Sbjct: 61  NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLGSLRAVPVEDAQEFAERENLFFMETSALESTNVETTFFTILTEIYRII 180
           IVIMLIGNK DLGSLRAVP EDAQEFA+RENLFFMETSALE+TNVET F TILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180

Query: 181 SKKSLAAGEEIGIGTNPALLRGTSIVVPGQDQDPERKGCC 221
           SKKSL A ++   G N +LL+GT I++P + +  +R GCC
Sbjct: 181 SKKSLTADDDDADG-NSSLLKGTRIIIPSEQESGKRGGCC 219

[Close]

BLAST of Sed0020166 vs. ExPASy Swiss-Prot
Match: P25766 (Ras-related protein RGP1 OS=Oryza sativa subsp. japonica OX=39947 GN=RGP1 PE=2 SV=2)

HSP 1 Score: 345.1 bits (884), Expect = 5.8e-94
Identity = 172/219 (78.54%), Postives = 192/219 (87.67%), Query Frame = 0


Query: 5   YGDYNQQSEYVFKVVLIGDSAVGKTQLLARFSRNEFSLDSKATIGVEFKTKTLIIDQKTV 64
           YG+  Q+ +YVFKVVLIGDSAVGK+QLLARF+RNEF+LDSKATIGVEF+T+TL ID +TV
Sbjct: 8   YGEVGQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTV 67

Query: 65  NAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIM 124
            AQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWLEELRGHADKNIVIM
Sbjct: 68  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIM 127

Query: 125 LIGNKSDLGSLRAVPVEDAQEFAERENLFFMETSALESTNVETTFFTILTEIYRIISKKS 184
           LIGNKSDLG+LR VP EDA+EFAERENLFFMETSALESTNVE  F T+LTEIYRI+SKK+
Sbjct: 128 LIGNKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKN 187

Query: 185 LAAGEEIGIGTNPALLRGTSIVVPGQDQDPERKGCCFAS 224
           L A EE+    N +LL+GT IVVPGQ+  P  K  C  S
Sbjct: 188 LVANEEVDSSGNSSLLKGTKIVVPGQEPAPPTKASCCMS 226

[Close]

BLAST of Sed0020166 vs. ExPASy Swiss-Prot
Match: Q9FE79 (Ras-related protein RABA4c OS=Arabidopsis thaliana OX=3702 GN=RABA4C PE=2 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 3.8e-93
Identity = 169/223 (75.78%), Postives = 198/223 (88.79%), Query Frame = 0


Query: 1   MSNLYGDYNQQSEYVFKVVLIGDSAVGKTQLLARFSRNEFSLDSKATIGVEFKTKTLIID 60
           MS    ++NQ+ +YVFKVVLIGDSAVGK+QLLARFSRNEFS++SKATIGVEF+T+TL ID
Sbjct: 1   MSKFQSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEID 60

Query: 61  QKTVNAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           +KT+ AQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWLEELRGHADKN
Sbjct: 61  RKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLGSLRAVPVEDAQEFAERENLFFMETSALESTNVETTFFTILTEIYRII 180
           IVIMLIGNK+DLG+LRAVP EDA+EFA+RENLFFMETSAL+S NVE +F T+LTEIYRI+
Sbjct: 121 IVIMLIGNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIV 180

Query: 181 SKKSLAAGEEIGIGTNPALLRGTSIVVPGQDQDPERKGCCFAS 224
           SKK+L A EE   G + +LL+GT IVV G++ + + KGCC  S
Sbjct: 181 SKKNLVANEEGESGGDSSLLQGTKIVVAGEETESKGKGCCGTS 223

[Close]

BLAST of Sed0020166 vs. ExPASy Swiss-Prot
Match: Q40191 (Ras-related protein Rab11A OS=Lotus japonicus OX=34305 GN=RAB11A PE=2 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 4.9e-85
Identity = 161/221 (72.85%), Postives = 187/221 (84.62%), Query Frame = 0


Query: 5   YGDYNQQSEYVFKVVLIGDSAVGKTQLLARFSRNEFSLDSKATIGVEFKTKTLIIDQKTV 64
           YGD N + +YVFKVVLIGDSAVGK+Q+LARF+RNEFSLDSK+TIGVEF+T+TL+ID KTV
Sbjct: 7   YGDANAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTV 66

Query: 65  NAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIM 124
            AQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ RWLEELR HADKNIVI+
Sbjct: 67  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVII 126

Query: 125 LIGNKSDLGSLRAVPVEDAQEFAERENLFFMETSALESTNVETTFFTILTEIYRIISKKS 184
           LIGNK DL + R VP EDA+EFAE+E LFF+ETSALE+TNVE+ F T+LTEIY I++KKS
Sbjct: 127 LIGNKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNIVNKKS 186

Query: 185 LAAGEEIGIGTNPALLRGTSIVVPGQDQD--PERKGCCFAS 224
           LAA E  G G N A L G  I++PG  Q+   +R  CC AS
Sbjct: 187 LAADESQGNG-NSASLSGQKIIIPGPAQEIPAKRNMCCQAS 226

[Close]

BLAST of Sed0020166 vs. ExPASy Swiss-Prot
Match: Q40522 (Ras-related protein Rab11D OS=Nicotiana tabacum OX=4097 GN=RAB11D PE=2 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 3.2e-84
Identity = 157/221 (71.04%), Postives = 188/221 (85.07%), Query Frame = 0


Query: 1   MSNLYGDYNQQSEYVFKVVLIGDSAVGKTQLLARFSRNEFSLDSKATIGVEFKTKTLIID 60
           M++ YGD +Q+ +YVFKVVLIGDSAVGK+Q+LARF+RNEFSLDSKATIGVEF+T+TL I 
Sbjct: 1   MASGYGDASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQ 60

Query: 61  QKTVNAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            K+V AQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ RWLEELR HAD+N
Sbjct: 61  HKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRN 120

Query: 121 IVIMLIGNKSDLGSLRAVPVEDAQEFAERENLFFMETSALESTNVETTFFTILTEIYRII 180
           IVIMLIGNK+DL   RAVP EDA+EFA++E LFF+ETSA+E+TN+E  F T+LTEI+ I+
Sbjct: 121 IVIMLIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLEDAFLTVLTEIFNIV 180

Query: 181 SKKSLAAGEEIGIGTNPALLRGTSIVVPGQDQ-DPERKGCC 221
           +KK+LAA +    G NPA L G  I+VPG  Q  PE+K CC
Sbjct: 181 NKKNLAADDNQSNG-NPASLTGKKILVPGPGQVIPEKKACC 220

[Close]

BLAST of Sed0020166 vs. ExPASy TrEMBL
Match: A0A0A0KW90 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G152280 PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 1.4e-111
Identity = 207/223 (92.83%), Postives = 214/223 (95.96%), Query Frame = 0


Query: 1   MSNLYGDYNQQSEYVFKVVLIGDSAVGKTQLLARFSRNEFSLDSKATIGVEFKTKTLIID 60
           MSNLYGDYNQ+ +YVFKVVLIGDSAVGKTQLLARFSRNEFS+DSKATIGVEF+TKTL+ID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVNAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTV AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLGSLRAVPVEDAQEFAERENLFFMETSALESTNVETTFFTILTEIYRII 180
           IVIMLIGNK DLGSLRAVP EDAQEFAERENLFFMETSALESTNVET FFTILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180

Query: 181 SKKSLAAGEEIGIGTNPALLRGTSIVVPGQDQDPERKGCCFAS 224
           SKKSLAAGEEI IG+NPAL +GTSIVVPGQDQD  RKGCCFAS
Sbjct: 181 SKKSLAAGEEIDIGSNPALFKGTSIVVPGQDQDSGRKGCCFAS 223

[Close]

BLAST of Sed0020166 vs. ExPASy TrEMBL
Match: A0A5A7UD85 (Ras-related protein RABA4d OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1192G00440 PE=4 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 1.6e-110
Identity = 205/223 (91.93%), Postives = 213/223 (95.52%), Query Frame = 0


Query: 1   MSNLYGDYNQQSEYVFKVVLIGDSAVGKTQLLARFSRNEFSLDSKATIGVEFKTKTLIID 60
           MSNLYGDYNQ+ +YVFKVVLIGDSAVGKTQLLARFSRNEFS+DSKATIGVEF+TKTL+ID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVNAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTV AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLGSLRAVPVEDAQEFAERENLFFMETSALESTNVETTFFTILTEIYRII 180
           IVIMLIGNK DLGSLRAVP EDAQEFAERENLFFMETSALESTNVET FFTILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180

Query: 181 SKKSLAAGEEIGIGTNPALLRGTSIVVPGQDQDPERKGCCFAS 224
           SKKSLAAGEEI IG+NPAL +GT+IVVPGQDQD   KGCCFAS
Sbjct: 181 SKKSLAAGEEIDIGSNPALFKGTNIVVPGQDQDSGTKGCCFAS 223

[Close]

BLAST of Sed0020166 vs. ExPASy TrEMBL
Match: A0A1S3CDP9 (ras-related protein RABA4d OS=Cucumis melo OX=3656 GN=LOC103499562 PE=4 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 1.6e-110
Identity = 205/223 (91.93%), Postives = 213/223 (95.52%), Query Frame = 0


Query: 1   MSNLYGDYNQQSEYVFKVVLIGDSAVGKTQLLARFSRNEFSLDSKATIGVEFKTKTLIID 60
           MSNLYGDYNQ+ +YVFKVVLIGDSAVGKTQLLARFSRNEFS+DSKATIGVEF+TKTL+ID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVNAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTV AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLGSLRAVPVEDAQEFAERENLFFMETSALESTNVETTFFTILTEIYRII 180
           IVIMLIGNK DLGSLRAVP EDAQEFAERENLFFMETSALESTNVET FFTILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRII 180

Query: 181 SKKSLAAGEEIGIGTNPALLRGTSIVVPGQDQDPERKGCCFAS 224
           SKKSLAAGEEI IG+NPAL +GT+IVVPGQDQD   KGCCFAS
Sbjct: 181 SKKSLAAGEEIDIGSNPALFKGTNIVVPGQDQDSGTKGCCFAS 223

[Close]

BLAST of Sed0020166 vs. ExPASy TrEMBL
Match: A0A6J1EAZ2 (ras-related protein RABA4d OS=Cucurbita moschata OX=3662 GN=LOC111432472 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 1.9e-108
Identity = 202/223 (90.58%), Postives = 210/223 (94.17%), Query Frame = 0


Query: 1   MSNLYGDYNQQSEYVFKVVLIGDSAVGKTQLLARFSRNEFSLDSKATIGVEFKTKTLIID 60
           MSNLYGDYNQ+ +YVFKVVLIGDSAVGKTQLL+RFSRNEFS+DSKATIGVEF+TKTL+ID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVNAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTV AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLGSLRAVPVEDAQEFAERENLFFMETSALESTNVETTFFTILTEIYRII 180
           IVIMLIGNK DLGSLRAVP EDAQEFAERENLFFMETSALESTNVET FF ILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180

Query: 181 SKKSLAAGEEIGIGTNPALLRGTSIVVPGQDQDPERKGCCFAS 224
           SKKSLAAGE I IG NPAL +GT+IVVPGQDQ   RKGCCFAS
Sbjct: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQDQAGGRKGCCFAS 223

[Close]

BLAST of Sed0020166 vs. ExPASy TrEMBL
Match: A0A6J1HTU8 (ras-related protein RABA4d OS=Cucurbita maxima OX=3661 GN=LOC111466102 PE=4 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 5.6e-108
Identity = 201/223 (90.13%), Postives = 210/223 (94.17%), Query Frame = 0


Query: 1   MSNLYGDYNQQSEYVFKVVLIGDSAVGKTQLLARFSRNEFSLDSKATIGVEFKTKTLIID 60
           MSNLYGDYNQ+ +YVFKVVLIGDSAVGKTQLL+RFSRNEFS+DSKATIGVEF+TKTL+ID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVNAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTV AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLGSLRAVPVEDAQEFAERENLFFMETSALESTNVETTFFTILTEIYRII 180
           IVIMLIGNK DLGSLRAVP EDAQEFAERENLFFMETSALESTNVET FF ILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180

Query: 181 SKKSLAAGEEIGIGTNPALLRGTSIVVPGQDQDPERKGCCFAS 224
           SKKSLAAGE I IG NPAL +GT+IVVPGQ+Q   RKGCCFAS
Sbjct: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQEQAGGRKGCCFAS 223

[Close]

BLAST of Sed0020166 vs. TAIR 10
Match: AT3G12160.1 (RAB GTPase homolog A4D )

HSP 1 Score: 364.0 bits (933), Expect = 8.6e-101
Identity = 182/220 (82.73%), Postives = 200/220 (90.91%), Query Frame = 0


Query: 1   MSNLYGDYNQQSEYVFKVVLIGDSAVGKTQLLARFSRNEFSLDSKATIGVEFKTKTLIID 60
           MSNLYGDYNQ+ +YVFKVVLIGDSAVGKTQLLARF+RNEFS+DSKATIGVEF+TKTL+ID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVNAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            KTV AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMA+WLEELRGHADKN
Sbjct: 61  NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLGSLRAVPVEDAQEFAERENLFFMETSALESTNVETTFFTILTEIYRII 180
           IVIMLIGNK DLGSLRAVP EDAQEFA+RENLFFMETSALE+TNVET F TILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180

Query: 181 SKKSLAAGEEIGIGTNPALLRGTSIVVPGQDQDPERKGCC 221
           SKKSL A ++   G N +LL+GT I++P + +  +R GCC
Sbjct: 181 SKKSLTADDDDADG-NSSLLKGTRIIIPSEQESGKRGGCC 219

[Close]

BLAST of Sed0020166 vs. TAIR 10
Match: AT5G47960.1 (RAB GTPase homolog A4C )

HSP 1 Score: 342.4 bits (877), Expect = 2.7e-94
Identity = 169/223 (75.78%), Postives = 198/223 (88.79%), Query Frame = 0


Query: 1   MSNLYGDYNQQSEYVFKVVLIGDSAVGKTQLLARFSRNEFSLDSKATIGVEFKTKTLIID 60
           MS    ++NQ+ +YVFKVVLIGDSAVGK+QLLARFSRNEFS++SKATIGVEF+T+TL ID
Sbjct: 1   MSKFQSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEID 60

Query: 61  QKTVNAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           +KT+ AQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWLEELRGHADKN
Sbjct: 61  RKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLGSLRAVPVEDAQEFAERENLFFMETSALESTNVETTFFTILTEIYRII 180
           IVIMLIGNK+DLG+LRAVP EDA+EFA+RENLFFMETSAL+S NVE +F T+LTEIYRI+
Sbjct: 121 IVIMLIGNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIV 180

Query: 181 SKKSLAAGEEIGIGTNPALLRGTSIVVPGQDQDPERKGCCFAS 224
           SKK+L A EE   G + +LL+GT IVV G++ + + KGCC  S
Sbjct: 181 SKKNLVANEEGESGGDSSLLQGTKIVVAGEETESKGKGCCGTS 223

[Close]

BLAST of Sed0020166 vs. TAIR 10
Match: AT5G65270.1 (RAB GTPase homolog A4A )

HSP 1 Score: 300.4 bits (768), Expect = 1.2e-81
Identity = 154/219 (70.32%), Postives = 183/219 (83.56%), Query Frame = 0


Query: 5   YGDYNQQSEYVFKVVLIGDSAVGKTQLLARFSRNEFSLDSKATIGVEFKTKTLIIDQKTV 64
           YGD +Q+ +YVFKVVLIGDSAVGK+Q+LAR++R+EFSLDSKATIGVEF+T+TL+ID K+V
Sbjct: 7   YGDPSQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSV 66

Query: 65  NAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIM 124
            AQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+T+RQ+FDH+ RWLEELR HADKNIVI+
Sbjct: 67  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVII 126

Query: 125 LIGNKSDLGSLRAVPVEDAQEFAERENLFFMETSALESTNVETTFFTILTEIYRIISKKS 184
           LIGNKSDL   RA+P EDA+EFAE+E LFF+ETSA  +TNVE+ F T+LTEI+ I++KKS
Sbjct: 127 LIGNKSDLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNIVNKKS 186

Query: 185 LAAGEEIGIGTNPALLRGTSI-VVPGQDQDPERKG--CC 221
           LAA E+   G NP  L G  I +VPG  Q    K   CC
Sbjct: 187 LAASEDQENG-NPGSLAGKKIDIVPGPGQVIPNKSNMCC 224

[Close]

BLAST of Sed0020166 vs. TAIR 10
Match: AT4G39990.1 (RAB GTPase homolog A4B )

HSP 1 Score: 295.4 bits (755), Expect = 3.8e-80
Identity = 149/221 (67.42%), Postives = 182/221 (82.35%), Query Frame = 0


Query: 5   YGDYNQQSEYVFKVVLIGDSAVGKTQLLARFSRNEFSLDSKATIGVEFKTKTLIIDQKTV 64
           YG  + + +YVFKVVLIGDSAVGK+QLLARF+R+EFS+DSKATIGVEF+T+TL I+QK++
Sbjct: 7   YGGASGKVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSI 66

Query: 65  NAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIM 124
            AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR++F+H+ RWLEELR HADKNIVI+
Sbjct: 67  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVII 126

Query: 125 LIGNKSDLGSLRAVPVEDAQEFAERENLFFMETSALESTNVETTFFTILTEIYRIISKKS 184
           LIGNKSDL   RAVP EDA+EFAE+E LFF+ETSAL +TNVE +F T++T+IY  ++KK+
Sbjct: 127 LIGNKSDLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKN 186

Query: 185 LAAGEEIGIGTNPALLRGTSIVVPGQDQDPERK--GCCFAS 224
           LA+    G   NP  L G  I++PG  Q+   K   CC +S
Sbjct: 187 LASE---GDSNNPGSLAGKKILIPGSGQEIPAKTSTCCTSS 224

[Close]

BLAST of Sed0020166 vs. TAIR 10
Match: AT1G09630.1 (RAB GTPase 11C )

HSP 1 Score: 260.8 bits (665), Expect = 1.0e-69
Identity = 130/215 (60.47%), Postives = 170/215 (79.07%), Query Frame = 0


Query: 9   NQQSEYVFKVVLIGDSAVGKTQLLARFSRNEFSLDSKATIGVEFKTKTLIIDQKTVNAQI 68
           +++ +Y+FKVVLIGDS VGK+ LL+RF+RNEF L+SK+TIGVEF T+TL ++ +TV AQI
Sbjct: 6   DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQI 65

Query: 69  WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGN 128
           WDTAGQERYRA+TSAYYRGA+GA+LVYD+TK  +F++++RWL+ELR HAD NIVIMLIGN
Sbjct: 66  WDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGN 125

Query: 129 KSDLGSLRAVPVEDAQEFAERENLFFMETSALESTNVETTFFTILTEIYRIISKKSLAAG 188
           K+DL  LRAV  EDAQ +AE+E L F+ETSALE+ NVE  F TIL+E+YRIISKKS+++ 
Sbjct: 126 KTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKKSISSD 185

Query: 189 EEIGIGTNPALLRGTSIVVPGQDQDPERKGCCFAS 224
           +      N  +  G +I V    +   +K CC +S
Sbjct: 186 QTT---ANANIKEGQTIDVAATSESNAKKPCCSSS 217

The following BLAST results are available for this feature:

BLAST of Sed0020166 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150166.1	3.0e-111	92.83	ras-related protein RABA4d [Cucumis sativus] >KGN53823.1 hypothetical protein Cs...	[more]
XP_038881448.1	1.9e-110	91.93	ras-related protein RABA4d [Benincasa hispida]	[more]
XP_008460801.1	3.3e-110	91.93	PREDICTED: ras-related protein RABA4d [Cucumis melo] >KAA0053214.1 ras-related p...	[more]
XP_022925137.1	4.0e-108	90.58	ras-related protein RABA4d [Cucurbita moschata] >XP_023518611.1 ras-related prot...	[more]
XP_022966454.1	1.2e-107	90.13	ras-related protein RABA4d [Cucurbita maxima]	[more]

BLAST of Sed0020166 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LH50	1.2e-99	82.73	Ras-related protein RABA4d OS=Arabidopsis thaliana OX=3702 GN=RABA4D PE=1 SV=1	[more]
P25766	5.8e-94	78.54	Ras-related protein RGP1 OS=Oryza sativa subsp. japonica OX=39947 GN=RGP1 PE=2 S...	[more]
Q9FE79	3.8e-93	75.78	Ras-related protein RABA4c OS=Arabidopsis thaliana OX=3702 GN=RABA4C PE=2 SV=1	[more]
Q40191	4.9e-85	72.85	Ras-related protein Rab11A OS=Lotus japonicus OX=34305 GN=RAB11A PE=2 SV=1	[more]
Q40522	3.2e-84	71.04	Ras-related protein Rab11D OS=Nicotiana tabacum OX=4097 GN=RAB11D PE=2 SV=1	[more]

BLAST of Sed0020166 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KW90	1.4e-111	92.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G152280 PE=4 SV=1	[more]
A0A5A7UD85	1.6e-110	91.93	Ras-related protein RABA4d OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A1S3CDP9	1.6e-110	91.93	ras-related protein RABA4d OS=Cucumis melo OX=3656 GN=LOC103499562 PE=4 SV=1	[more]
A0A6J1EAZ2	1.9e-108	90.58	ras-related protein RABA4d OS=Cucurbita moschata OX=3662 GN=LOC111432472 PE=4 SV...	[more]
A0A6J1HTU8	5.6e-108	90.13	ras-related protein RABA4d OS=Cucurbita maxima OX=3661 GN=LOC111466102 PE=4 SV=1	[more]

BLAST of Sed0020166 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12160.1	8.6e-101	82.73	RAB GTPase homolog A4D	[more]
AT5G47960.1	2.7e-94	75.78	RAB GTPase homolog A4C	[more]
AT5G65270.1	1.2e-81	70.32	RAB GTPase homolog A4A	[more]
AT4G39990.1	3.8e-80	67.42	RAB GTPase homolog A4B	[more]
AT1G09630.1	1.0e-69	60.47	RAB GTPase 11C	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 16..37 score: 50.9 coord: 57..79 score: 46.28 coord: 144..166 score: 41.06 coord: 39..55 score: 35.83
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 16..169 e-value: 2.6E-86 score: 302.7
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 13..169 e-value: 4.3E-17 score: 72.8
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 21..205 e-value: 0.001 score: 4.5
None	No IPR available	PANTHER	PTHR47978:SF27	BNAA05G26830D PROTEIN	coord: 1..211
None	No IPR available	PANTHER	PTHR47978	FAMILY NOT NAMED	coord: 1..211
None	No IPR available	PROSITE	PS51419	RAB	coord: 11..210 score: 28.719635
None	No IPR available	CDD	cd01868	Rab11_like	coord: 13..167 e-value: 2.61494E-106 score: 301.016
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 18..165 e-value: 6.1E-10 score: 8.2
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 17..167 e-value: 3.0E-49 score: 166.7
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 10..213 score: 12.887861
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 15..160 e-value: 2.1E-26 score: 90.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 8..210 e-value: 1.9E-57 score: 195.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 11..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0020166.1	Sed0020166.1	mRNA
Sed0020166.2	Sed0020166.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0080092	regulation of pollen tube growth
cellular_component	GO:0045177	apical part of cell
cellular_component	GO:0070382	exocytic vesicle
cellular_component	GO:0090404	pollen tube tip
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0019900	kinase binding