Sed0020162 (gene) Chayote v1

Overview


Name	Sed0020162
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Homeobox-leucine zipper protein like
Location	LG07: 15100056 .. 15102957 (+)
RNA-Seq Expression	Sed0020162
Synteny	Sed0020162

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTTAACACACTATTCTCAACTCAGTTTCATACCCAAAATAAACCCCCTCAGAGCTATAGAGAGAAAGAGAGAGAAATTGCAAAGCTACCATGAACCACCAAGTAACTGAAGATCAGCAACAAGCAGTACAAATCTCTCAGTTGTACACTGGATTATACATCCAAATGGTACCCCAACAAGGTTTGTACCTTTCTTTTTTCAACATAGACTCTTCTTTTCAAGTCCTCCCAAAAGTTCATTTACATTTTTCTTATTCAAATTTAACTTTGTCCACCCGAGCATAGCTCAAACGTTAAGGCCGCGTTTGATTATTATATTGTTTTTAGTTTTCGAAATTTAAACTTACAACAACTAACTTATTATATATTTTGCCAAACTAAAATTTGGAAGAAAAAAAAAAGCTTCAAGCAAATTGTTTTTGTTTTTTAAATGTGAATAGTATTCACATGTTTTTTTAAGAAAAAATGAATACATTGTACAAAAGATAAAATGCATTTGAGTAAAAATAAACCTAAATTTCAAAAATCAAAAGAAAAACTAAATAGTTATCAAACGGGAGTTTAAAGCAAAATGTTTGTAGGTAATTTGGGTGAGGGAAAGGCGAGACGACGTCGTAAGAAGAACAAAGGATCGGAAGCGGAGGCGGCAGCGAAGAAGCGGAAGCTGACAGAGGAGCAAGTTCATCTTTTGGAGACAAATTTTGGGAGTGAACACAAGTTGGAGTCGGAGAGAAAGGACCGTTTGGCGTCGGAGTTGGGGCTGGATCCCCGGCAGGTGGCCGTTTGGTTTCAGAACCGCCGTGCGCGGTGGAAGAACAAGAAACTTGAGGAGGAATATTGTAACCTAAAGAAGATTCATGAATCCGTTGTCGTTGAAAAATGTCGTCTTGAAAATGAGGTCCATTTCTCCCTTTCTTTCCTGCTCCTCTTTTTTCTCGGCTTTCAAAAACAGAATCAAATCATTGTTTTTAATCTTTTATATATATATATATATATAAGAAAATGGGACAAAAACTTGTAGTACCATAAACAATATTATTTAAGAATGCCATAATTCGATGTGAATAAGAATAATAATAAAAAAAATGATAAGACTAAATATGAATGCTGGATTTATCTCTATAAAAAATGAAATTGCCCATTACTCCTACATGTTTCTTTAATTATAAAAAATAAGTATCATTTGTTTATAATCAGAAAATCAAAATTGTTCAACTAGATAATCATTTCACGTAGTAGTTCGTTCTACTTCATATTCATTAAATGAATCTTTTAACTAAGCTCATTTACTTATTTTAAAATTAAGATTTCGTTCATTTAAACCTTCTAACTAACAAAGCATTAAGTTCACTTAAATGTTGTATAGTATAGTATAATGCTAAAAGATACGGTTATTACTATAATACTTAAAAAGAACATCAAAACTAGGATGGTGAGAGTGACTTTTTAAATAAAATACTTGTTTGGATAGTAGAACTTTTTGCTTAGGACTATATATAAAGATAATCACGTATGGGAAAGTAAATTTGATAGAGAAAGATAATGACTAAGATGTTACGAATTTAAATTATCTCTCGATAATAATAAAACTAAAAAAAAAAAAAAAAAGTTTGACTACTTTAGGTGAAAAAGAGAGGGGGTGGGCCATCATTTATGAACGTGCATGGGCTCTGGGCTCGAAGAAACCCACGCCACCTTGTTGTGAATGGGGTGGAAAATATGTTGTCTCTTTAAGAAAATTACAAAATGTTTTGACAGAACTTTAAAAAATAAAATAAAATAAAGTGATCATAAGAAAGTGTTTCGGACAACGTTGTTTGTTTTTATATGGGCTGTCGGCTCACTTGGGTTGGCTGGGTCTCACTTCTACCTTGCACCCATCAAGACGAACTATCTCTCACTTTTTTTAATAGTAAATATAGTAATTTAAATTAGTTATTTTCTTCAATTTAAACCTTTCTCAATTTCTCGAAAAATAAAAAATAAAAATATAGCTCAATTTATTAATATATATATATATATATATTATAAAAGCTCTTTTTACTAAACCAAAAGACTATTTGACTAACTTCCCATTGTTTTAGTTTGTATAAGAAAAAAAACTTAGACTTCATTTCATAACCAGATTTTTTTATTTTAATTTTTTTAATTTAAGATTATTTCTACTCAAATTTCCTTTCATGTTTTCCATTTTTCTAAGTATGTAACCATCATTTCTTAACAAAAGGTATATGAATGCTTGCCAAATTTCAAAAATCAAAAAACTTTTTGAAAGTTACTTTTTTTTTTTCTAAATTTTTGGTTTGATTTCTAAGAATATAGGTAGGATGTAGATATTCAAGTAAGAAAATACATATGTTAAGGTACTTGTTGTAGGTTTAAATTTCAAAAAAAAAATAATAATAAAATGATTATCAAACGGGGTATTAACAACTTGTTTTTAACTCGTGCAAAATTGATAGTATATACATTTATATAAATTTGTAGAACATTTTAATGTTTAGGAACTTATTAGATATTAGGATTAACTTTTTTGTAAGTAAAACAGTAAGGCTAATTTGTTGTTGATGATTTTGCAGATATTGAAGCTAAAAGAACAACTTTCAGAGGTGGTAAAAGAAAAGGAGAGGCTGATAATGGGAGAACGGGCCGATGGGCCTCTAAGCAGCAGCTCAAGCCCATTAGAGCCCACATGCCTTGGGGAATTTGGAGCAATATTTGAAGATGTGTTTTATTACATGCCAGAAGACTCTTGCATTTATGACATGGAATGGCCAAATCCCTACATTTAATTCTTACTAATACTCTCCCTTAATTTATGAACATATAATAAATGTATTGTTATTAGTGTTTTCCTTTGTTTCCTTTTTCTCTTTTCTTTTGTAGAAATTTTATCAAGCT

mRNA sequence

CTTTTAACACACTATTCTCAACTCAGTTTCATACCCAAAATAAACCCCCTCAGAGCTATAGAGAGAAAGAGAGAGAAATTGCAAAGCTACCATGAACCACCAAGTAACTGAAGATCAGCAACAAGCAGTACAAATCTCTCAGTTGTACACTGGATTATACATCCAAATGGTACCCCAACAAGGTAATTTGGGTGAGGGAAAGGCGAGACGACGTCGTAAGAAGAACAAAGGATCGGAAGCGGAGGCGGCAGCGAAGAAGCGGAAGCTGACAGAGGAGCAAGTTCATCTTTTGGAGACAAATTTTGGGAGTGAACACAAGTTGGAGTCGGAGAGAAAGGACCGTTTGGCGTCGGAGTTGGGGCTGGATCCCCGGCAGGTGGCCGTTTGGTTTCAGAACCGCCGTGCGCGGTGGAAGAACAAGAAACTTGAGGAGGAATATTGTAACCTAAAGAAGATTCATGAATCCGTTGTCGTTGAAAAATGTCGTCTTGAAAATGAGATATTGAAGCTAAAAGAACAACTTTCAGAGGTGGTAAAAGAAAAGGAGAGGCTGATAATGGGAGAACGGGCCGATGGGCCTCTAAGCAGCAGCTCAAGCCCATTAGAGCCCACATGCCTTGGGGAATTTGGAGCAATATTTGAAGATGTGTTTTATTACATGCCAGAAGACTCTTGCATTTATGACATGGAATGGCCAAATCCCTACATTTAATTCTTACTAATACTCTCCCTTAATTTATGAACATATAATAAATGTATTGTTATTAGTGTTTTCCTTTGTTTCCTTTTTCTCTTTTCTTTTGTAGAAATTTTATCAAGCT

Coding sequence (CDS)

ATGAACCACCAAGTAACTGAAGATCAGCAACAAGCAGTACAAATCTCTCAGTTGTACACTGGATTATACATCCAAATGGTACCCCAACAAGGTAATTTGGGTGAGGGAAAGGCGAGACGACGTCGTAAGAAGAACAAAGGATCGGAAGCGGAGGCGGCAGCGAAGAAGCGGAAGCTGACAGAGGAGCAAGTTCATCTTTTGGAGACAAATTTTGGGAGTGAACACAAGTTGGAGTCGGAGAGAAAGGACCGTTTGGCGTCGGAGTTGGGGCTGGATCCCCGGCAGGTGGCCGTTTGGTTTCAGAACCGCCGTGCGCGGTGGAAGAACAAGAAACTTGAGGAGGAATATTGTAACCTAAAGAAGATTCATGAATCCGTTGTCGTTGAAAAATGTCGTCTTGAAAATGAGATATTGAAGCTAAAAGAACAACTTTCAGAGGTGGTAAAAGAAAAGGAGAGGCTGATAATGGGAGAACGGGCCGATGGGCCTCTAAGCAGCAGCTCAAGCCCATTAGAGCCCACATGCCTTGGGGAATTTGGAGCAATATTTGAAGATGTGTTTTATTACATGCCAGAAGACTCTTGCATTTATGACATGGAATGGCCAAATCCCTACATTTAA

Protein sequence

MNHQVTEDQQQAVQISQLYTGLYIQMVPQQGNLGEGKARRRRKKNKGSEAEAAAKKRKLTEEQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYCNLKKIHESVVVEKCRLENEILKLKEQLSEVVKEKERLIMGERADGPLSSSSSPLEPTCLGEFGAIFEDVFYYMPEDSCIYDMEWPNPYI

Homology

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BLAST of Sed0020162 vs. NCBI nr
Match: XP_038877287.1 (homeobox-leucine zipper protein ATHB-40-like [Benincasa hispida])

HSP 1 Score: 323.2 bits (827), Expect = 1.7e-84
Identity = 177/215 (82.33%), Postives = 187/215 (86.98%), Query Frame = 0


Query: 1   MNHQVTEDQQQAVQISQLYTGLYIQMVPQQGNLGEGKARRRRKKNKGSEAEAAA--KKRK 60
           MNHQ TE + QAVQISQLYT LYIQMVPQQGNL E K RRRRKKN+GSEAEAAA  KKRK
Sbjct: 1   MNHQETE-EHQAVQISQLYTELYIQMVPQQGNLSESKPRRRRKKNRGSEAEAAAGGKKRK 60

Query: 61  LTEEQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYCN 120
           LT  QV LLE+NFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEY N
Sbjct: 61  LTAAQVLLLESNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSN 120

Query: 121 LKKIHESVVVEKCRLENEILKLKEQLSEVVKEKERLIMGERADGPLSSSS-SP------L 180
           LKK+HESVVVEKCRLE EILKLKEQLSE  KEKER+IMGERADGPLSSSS SP      +
Sbjct: 121 LKKLHESVVVEKCRLETEILKLKEQLSEAEKEKERVIMGERADGPLSSSSPSPSMSMDAV 180

Query: 181 EPTCLGEFGAIFEDVFYYMPEDSCIYDMEWPNPYI 207
           +PTCLGE   ++EDVFYYMPE+ CIY MEWPNPYI
Sbjct: 181 DPTCLGEIPPLYEDVFYYMPENYCIYGMEWPNPYI 214

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BLAST of Sed0020162 vs. NCBI nr
Match: KAG7031239.1 (Homeobox-leucine zipper protein ATHB-40 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 320.1 bits (819), Expect = 1.4e-83
Identity = 175/215 (81.40%), Postives = 187/215 (86.98%), Query Frame = 0


Query: 1   MNHQVTEDQQQAVQISQLYTGLYIQMVPQQ--GNLGEGKARRRRKKNKGSEAEAAAKKRK 60
           MN Q +E + +AVQI +LYT LYIQMVPQQ   NLGE K RRRRKKN+GSEA+A AKKRK
Sbjct: 1   MNQQESE-EHEAVQICELYTPLYIQMVPQQQDNNLGEAKRRRRRKKNRGSEADAVAKKRK 60

Query: 61  LTEEQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYCN 120
           LT  QVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEY +
Sbjct: 61  LTAAQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSS 120

Query: 121 LKKIHESVVVEKCRLENEILKLKEQLSEVVKEKERLIMGERADGPLSSSS-SP------L 180
           LKK+HESVVVEKCRLE +ILKLKEQLSEV KEKERLIMGER DGPLSSSS SP      +
Sbjct: 121 LKKLHESVVVEKCRLETQILKLKEQLSEVEKEKERLIMGERGDGPLSSSSPSPSMSMDAV 180

Query: 181 EPTCLGEFGAIFEDVFYYMPEDSCIYDMEWPNPYI 207
           +PT LGEFGA FEDVFYYMPE+SCIY MEWPNPYI
Sbjct: 181 DPTGLGEFGASFEDVFYYMPENSCIYGMEWPNPYI 214

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BLAST of Sed0020162 vs. NCBI nr
Match: XP_022943109.1 (homeobox-leucine zipper protein ATHB-40-like [Cucurbita moschata])

HSP 1 Score: 318.9 bits (816), Expect = 3.1e-83
Identity = 174/215 (80.93%), Postives = 187/215 (86.98%), Query Frame = 0


Query: 1   MNHQVTEDQQQAVQISQLYTGLYIQMVPQQ--GNLGEGKARRRRKKNKGSEAEAAAKKRK 60
           MN Q +E +++AVQI +LYT LYIQMVPQQ   NLGE K RRRRKKN+GSEA+A AKKRK
Sbjct: 1   MNQQESE-EREAVQICELYTPLYIQMVPQQQDNNLGEAKRRRRRKKNRGSEADAVAKKRK 60

Query: 61  LTEEQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYCN 120
           LT  QVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEY +
Sbjct: 61  LTAAQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSS 120

Query: 121 LKKIHESVVVEKCRLENEILKLKEQLSEVVKEKERLIMGERADGPLSSSS-SP------L 180
           LKK+HESVVVEKCRLE +ILKLKEQLSE  KEKERLIMGER DGPLSSSS SP      +
Sbjct: 121 LKKLHESVVVEKCRLETQILKLKEQLSEAEKEKERLIMGERGDGPLSSSSPSPSMSMDAV 180

Query: 181 EPTCLGEFGAIFEDVFYYMPEDSCIYDMEWPNPYI 207
           +PT LGEFGA FEDVFYYMPE+SCIY MEWPNPYI
Sbjct: 181 DPTGLGEFGASFEDVFYYMPENSCIYGMEWPNPYI 214

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BLAST of Sed0020162 vs. NCBI nr
Match: XP_023512650.1 (homeobox-leucine zipper protein ATHB-40-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 314.3 bits (804), Expect = 7.7e-82
Identity = 172/215 (80.00%), Postives = 186/215 (86.51%), Query Frame = 0


Query: 1   MNHQVTEDQQQAVQISQLYTGLYIQMVPQQ--GNLGEGKARRRRKKNKGSEAEAAAKKRK 60
           MN Q +E + +AVQ+ +LYT LYIQM+PQQ   NL E K RRRRKKN+GSEA+A AKKRK
Sbjct: 1   MNQQESE-EHEAVQMCELYTPLYIQMLPQQQDNNLVEAKRRRRRKKNRGSEADAVAKKRK 60

Query: 61  LTEEQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYCN 120
           LT  QVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEY +
Sbjct: 61  LTAAQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSS 120

Query: 121 LKKIHESVVVEKCRLENEILKLKEQLSEVVKEKERLIMGERADGPLSSSS-SP------L 180
           LKK+HESVVVEKCRLE +ILKLKEQLSEV KEKERLIMGER DGPLSSSS SP      +
Sbjct: 121 LKKLHESVVVEKCRLETQILKLKEQLSEVEKEKERLIMGERGDGPLSSSSPSPSMSMDAV 180

Query: 181 EPTCLGEFGAIFEDVFYYMPEDSCIYDMEWPNPYI 207
           +PT LGEFGA FEDVFYYMPE+SCIY MEWPNPYI
Sbjct: 181 DPTGLGEFGASFEDVFYYMPENSCIYGMEWPNPYI 214

[Close]

BLAST of Sed0020162 vs. NCBI nr
Match: XP_022982706.1 (homeobox-leucine zipper protein ATHB-40-like [Cucurbita maxima])

HSP 1 Score: 310.8 bits (795), Expect = 8.6e-81
Identity = 171/215 (79.53%), Postives = 184/215 (85.58%), Query Frame = 0


Query: 1   MNHQVTEDQQQAVQISQLYTGLYIQMVPQQ--GNLGEGKARRRRKKNKGSEAEAAAKKRK 60
           MN Q +E + +AVQI +LYT LYIQMVPQQ   NLGE K RRRRKKN+GSEA+A AKKRK
Sbjct: 1   MNQQESE-EHEAVQICELYTPLYIQMVPQQQDNNLGEAKRRRRRKKNRGSEADAVAKKRK 60

Query: 61  LTEEQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYCN 120
           LT  QVHLLET+FGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEY +
Sbjct: 61  LTAAQVHLLETHFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSS 120

Query: 121 LKKIHESVVVEKCRLENEILKLKEQLSEVVKEKERLIMGERADGPLSSSS-SP------L 180
           LKK+HESVVVEKCRLE +ILKLKEQLSEV KEKER  MGER DGPLSSSS SP      +
Sbjct: 121 LKKLHESVVVEKCRLETQILKLKEQLSEVEKEKERQTMGERGDGPLSSSSPSPSMSMDAV 180

Query: 181 EPTCLGEFGAIFEDVFYYMPEDSCIYDMEWPNPYI 207
           +PT L EFGA FEDVFYYMPE+SCIY MEWPNPYI
Sbjct: 181 DPTGLEEFGASFEDVFYYMPENSCIYGMEWPNPYI 214

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BLAST of Sed0020162 vs. ExPASy Swiss-Prot
Match: O23208 (Homeobox-leucine zipper protein ATHB-40 OS=Arabidopsis thaliana OX=3702 GN=ATHB-40 PE=2 SV=3)

HSP 1 Score: 186.8 bits (473), Expect = 2.4e-46
Identity = 116/220 (52.73%), Postives = 150/220 (68.18%), Query Frame = 0


Query: 6   TEDQQQAVQISQLYTGLYIQMVPQQGNLGEGKARRRRKKNKGSEAEAAA-----KKRKLT 65
           T D Q    ISQLY  +Y Q+V Q G + + K  RRRKK KGS A A       +KRKLT
Sbjct: 4   TVDDQNMAFISQLYPDVYTQIV-QPGEVKQPK--RRRKKTKGSVASADGGNGLFRKRKLT 63

Query: 66  EEQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYCNLK 125
           +EQV++LE +FG EHKLESERKDRLA+ELGLDPRQVAVWFQNRRARWKNK+LEEEY  LK
Sbjct: 64  DEQVNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQNRRARWKNKRLEEEYNKLK 123

Query: 126 KIHESVVVEKCRLENEILKLKEQLSEVVKEKERLIMGERADGPLSSSSSPLEPTC----- 185
             H++VVV+KCRLE+E+++LKEQL +  +E +RL   ER +G   SS+SP+  +      
Sbjct: 124 NSHDNVVVDKCRLESEVIQLKEQLYDAEREIQRL--AERVEG--GSSNSPISSSVSVEAN 183

Query: 186 ---------LGEFGAIFEDVFYYMPEDSCIYDMEWPNPYI 207
                    +G+ G  ++ +FY +PE+S I + EW + YI
Sbjct: 184 ETPFFGDYKVGDDGDDYDHLFYPVPENSYIDEAEWMSLYI 216

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BLAST of Sed0020162 vs. ExPASy Swiss-Prot
Match: Q9ZU70 (Homeobox-leucine zipper protein ATHB-21 OS=Arabidopsis thaliana OX=3702 GN=ATHB-21 PE=2 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.3e-39
Identity = 98/176 (55.68%), Postives = 124/176 (70.45%), Query Frame = 0


Query: 1   MNHQVTEDQQQAVQISQLYTGLYIQMVPQQGNLGEGKARRRRKKNKGS---------EAE 60
           MN+Q  +D    + ISQLY  +Y  +VPQQG  GE K  RRRK+   S         E  
Sbjct: 1   MNNQNVDD-HNLLLISQLYPNVYTPLVPQQG--GEAKPTRRRKRKSKSVVVAEEGENEGN 60

Query: 61  AAAKKRKLTEEQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKK 120
              +KRKL++EQV +LE +F  +HKLESERKDRLASELGLDPRQVAVWFQNRRARWKNK+
Sbjct: 61  GWFRKRKLSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKR 120

Query: 121 LEEEYCNLKKIHESVVVEKCRLENEILKLKEQLSEVVKEKERLIMGERADGPLSSS 168
           +E+EY  LK  +E+ VVEKCRL++E++ LKEQL E  +E +RL   +R +G LS+S
Sbjct: 121 VEDEYTKLKNAYETTVVEKCRLDSEVIHLKEQLYEAEREIQRL--AKRVEGTLSNS 171

[Close]

BLAST of Sed0020162 vs. ExPASy Swiss-Prot
Match: Q9LVR0 (Homeobox-leucine zipper protein ATHB-53 OS=Arabidopsis thaliana OX=3702 GN=ATHB-53 PE=2 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 3.7e-34
Identity = 92/185 (49.73%), Postives = 123/185 (66.49%), Query Frame = 0


Query: 39  RRRRKKNKGSEAE---------AAAKKRKLTEEQVHLLETNFGSEHKLESERKDRLASEL 98
           RRR++++KGS A             +KRKLT+EQV++LE +FG+EHKLES RK+++A EL
Sbjct: 46  RRRKRRSKGSSATNEEDVAEIGGMLRKRKLTDEQVNMLEYSFGNEHKLESGRKEKIAGEL 105

Query: 99  GLDPRQVAVWFQNRRARWKNKKLEEEYCNLKKIHESVVVEKCRLENEILKLKEQLSEVVK 158
           GLDPRQVAVWFQNRRARWKNKKLEEEY  LK  H++VV+ +C+LE++ILKL EQLSE   
Sbjct: 106 GLDPRQVAVWFQNRRARWKNKKLEEEYAKLKNHHDNVVLGQCQLESQILKLTEQLSEAQS 165

Query: 159 EKERLIMGERADG-PLSSSSSPLE------PTCLGEFGAIFEDVFYYMPEDSCIYDME-W 207
           E  +L   ER +  P +SSSS L       PT          ++ +YM +++ +  ME W
Sbjct: 166 EIRKL--SERLEEMPTNSSSSSLSVEANNAPTDFELAPETNYNIPFYMLDNNYLQSMEYW 225

[Close]

BLAST of Sed0020162 vs. ExPASy Swiss-Prot
Match: A2XDK5 (Homeobox-leucine zipper protein HOX12 OS=Oryza sativa subsp. indica OX=39946 GN=HOX12 PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.2e-26
Identity = 77/168 (45.83%), Postives = 105/168 (62.50%), Query Frame = 0


Query: 37  KARRRRKKNKGSEAEAA----------AKKRKLTEEQVHLLETNFGSEHKLESERKDRLA 96
           KAR+RR++    EA AA          AKKR+L++EQ   LE +F  E KLE+ RK +LA
Sbjct: 33  KARQRRRRKVKPEAAAALAGESGGDEQAKKRRLSDEQARFLEMSFKKERKLETPRKVQLA 92

Query: 97  SELGLDPRQVAVWFQNRRARWKNKKLEEEYCNLKKIHESVVVEKCRLENEILKLKEQLSE 156
           +ELGLD +QVAVWFQNRRAR K+K +EEE+  L+  H++VV++ C LE E+LKLKE+L++
Sbjct: 93  AELGLDAKQVAVWFQNRRARHKSKLMEEEFAKLRSAHDAVVLQNCHLETELLKLKERLAD 152

Query: 157 VVKEKERLIM------------GERADGPLSSSSSPL--EPTCLGEFG 181
           V +EK +L              G  +  P SSS S +   P   G+FG
Sbjct: 153 VEEEKAKLAAVAAATTGGGGGGGGGSSSPTSSSFSTVTYHPVLAGQFG 200

[Close]

BLAST of Sed0020162 vs. ExPASy Swiss-Prot
Match: Q10QF2 (Homeobox-leucine zipper protein HOX12 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX12 PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.2e-26
Identity = 77/168 (45.83%), Postives = 105/168 (62.50%), Query Frame = 0


Query: 37  KARRRRKKNKGSEAEAA----------AKKRKLTEEQVHLLETNFGSEHKLESERKDRLA 96
           KAR+RR++    EA AA          AKKR+L++EQ   LE +F  E KLE+ RK +LA
Sbjct: 33  KARQRRRRKVKPEAAAALAGESGGDEQAKKRRLSDEQARFLEMSFKKERKLETPRKVQLA 92

Query: 97  SELGLDPRQVAVWFQNRRARWKNKKLEEEYCNLKKIHESVVVEKCRLENEILKLKEQLSE 156
           +ELGLD +QVAVWFQNRRAR K+K +EEE+  L+  H++VV++ C LE E+LKLKE+L++
Sbjct: 93  AELGLDAKQVAVWFQNRRARHKSKLMEEEFAKLRSAHDAVVLQNCHLETELLKLKERLAD 152

Query: 157 VVKEKERLIM------------GERADGPLSSSSSPL--EPTCLGEFG 181
           V +EK +L              G  +  P SSS S +   P   G+FG
Sbjct: 153 VEEEKAKLAAVAAATTGGGGGGGGGSSSPTSSSFSTVTYHPALAGQFG 200

[Close]

BLAST of Sed0020162 vs. ExPASy TrEMBL
Match: A0A6J1FTB2 (homeobox-leucine zipper protein ATHB-40-like OS=Cucurbita moschata OX=3662 GN=LOC111447938 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.5e-83
Identity = 174/215 (80.93%), Postives = 187/215 (86.98%), Query Frame = 0


Query: 1   MNHQVTEDQQQAVQISQLYTGLYIQMVPQQ--GNLGEGKARRRRKKNKGSEAEAAAKKRK 60
           MN Q +E +++AVQI +LYT LYIQMVPQQ   NLGE K RRRRKKN+GSEA+A AKKRK
Sbjct: 1   MNQQESE-EREAVQICELYTPLYIQMVPQQQDNNLGEAKRRRRRKKNRGSEADAVAKKRK 60

Query: 61  LTEEQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYCN 120
           LT  QVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEY +
Sbjct: 61  LTAAQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSS 120

Query: 121 LKKIHESVVVEKCRLENEILKLKEQLSEVVKEKERLIMGERADGPLSSSS-SP------L 180
           LKK+HESVVVEKCRLE +ILKLKEQLSE  KEKERLIMGER DGPLSSSS SP      +
Sbjct: 121 LKKLHESVVVEKCRLETQILKLKEQLSEAEKEKERLIMGERGDGPLSSSSPSPSMSMDAV 180

Query: 181 EPTCLGEFGAIFEDVFYYMPEDSCIYDMEWPNPYI 207
           +PT LGEFGA FEDVFYYMPE+SCIY MEWPNPYI
Sbjct: 181 DPTGLGEFGASFEDVFYYMPENSCIYGMEWPNPYI 214

[Close]

BLAST of Sed0020162 vs. ExPASy TrEMBL
Match: A0A6J1J034 (homeobox-leucine zipper protein ATHB-40-like OS=Cucurbita maxima OX=3661 GN=LOC111481488 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 4.1e-81
Identity = 171/215 (79.53%), Postives = 184/215 (85.58%), Query Frame = 0


Query: 1   MNHQVTEDQQQAVQISQLYTGLYIQMVPQQ--GNLGEGKARRRRKKNKGSEAEAAAKKRK 60
           MN Q +E + +AVQI +LYT LYIQMVPQQ   NLGE K RRRRKKN+GSEA+A AKKRK
Sbjct: 1   MNQQESE-EHEAVQICELYTPLYIQMVPQQQDNNLGEAKRRRRRKKNRGSEADAVAKKRK 60

Query: 61  LTEEQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYCN 120
           LT  QVHLLET+FGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEY +
Sbjct: 61  LTAAQVHLLETHFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSS 120

Query: 121 LKKIHESVVVEKCRLENEILKLKEQLSEVVKEKERLIMGERADGPLSSSS-SP------L 180
           LKK+HESVVVEKCRLE +ILKLKEQLSEV KEKER  MGER DGPLSSSS SP      +
Sbjct: 121 LKKLHESVVVEKCRLETQILKLKEQLSEVEKEKERQTMGERGDGPLSSSSPSPSMSMDAV 180

Query: 181 EPTCLGEFGAIFEDVFYYMPEDSCIYDMEWPNPYI 207
           +PT L EFGA FEDVFYYMPE+SCIY MEWPNPYI
Sbjct: 181 DPTGLEEFGASFEDVFYYMPENSCIYGMEWPNPYI 214

[Close]

BLAST of Sed0020162 vs. ExPASy TrEMBL
Match: A0A1S3BY52 (homeobox-leucine zipper protein ATHB-40 OS=Cucumis melo OX=3656 GN=LOC103494370 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.6e-80
Identity = 169/218 (77.52%), Postives = 185/218 (84.86%), Query Frame = 0


Query: 1   MNHQVTEDQQQAVQISQLYTGLYIQMVPQQGNLGEGKARRRRKKNKGSEAEAAA--KKRK 60
           MN Q TE + Q+VQISQLY GLYIQM+PQQGNLGE K RRRRKKN+GSE EA++  KKRK
Sbjct: 1   MNQQQTE-EHQSVQISQLYNGLYIQMLPQQGNLGESKPRRRRKKNRGSETEASSGGKKRK 60

Query: 61  LTEEQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYCN 120
           LT  QVHLLE+NFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEY N
Sbjct: 61  LTAAQVHLLESNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSN 120

Query: 121 LKKIHESVVVEKCRLENEILKLKEQLSEVVKEKERLIMGERADGPLSSSS-SP------- 180
           LKK+HESVVVEKCRLE E+LKLKEQL EV KEKER+IMGERADGPLSSSS SP       
Sbjct: 121 LKKLHESVVVEKCRLETELLKLKEQLIEVEKEKERVIMGERADGPLSSSSPSPSMSMEAM 180

Query: 181 -LEPTCLGEFGAIF-EDVFYYMPEDSCIYDMEWPNPYI 207
            ++P  LGE   ++ EDVFYYMPE+ CIY MEWPNPY+
Sbjct: 181 EMDPISLGEISPLYEEDVFYYMPENYCIYGMEWPNPYL 217

[Close]

BLAST of Sed0020162 vs. ExPASy TrEMBL
Match: A0A6J1C5L6 (homeobox-leucine zipper protein ATHB-40-like OS=Momordica charantia OX=3673 GN=LOC111008181 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 3.3e-78
Identity = 173/226 (76.55%), Postives = 186/226 (82.30%), Query Frame = 0


Query: 1   MNHQVTEDQQQAVQISQLYTGLYIQMVPQQGNLGEGKARRRRKKNKGSE----AEAAAKK 60
           MNHQ+TE + QAVQISQLYTGLYIQM PQQGN GE K RRRRKKN+GS     A AAAKK
Sbjct: 1   MNHQITE-EHQAVQISQLYTGLYIQMAPQQGNSGESKPRRRRKKNRGSSESEAAAAAAKK 60

Query: 61  RKLTEEQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEY 120
           RKLT +QVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEY
Sbjct: 61  RKLTAQQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEY 120

Query: 121 CNLKKIHESVVVEKCRLENEILKLKEQLSEVVKEKERLIMGERADGPLSSSSSP------ 180
            +LKK+HESVVVEKCRLE EIL LKEQLSE  KEKERL+   RADGPLSSS SP      
Sbjct: 121 SHLKKLHESVVVEKCRLETEILNLKEQLSEAEKEKERLM---RADGPLSSSPSPSMSMEA 180

Query: 181 LEPT---CLGEFGAI-FEDVFYYMPE----DSCIY--DMEWPNPYI 207
           ++PT   CLGEFG+   EDVFYYMPE    ++CIY  +MEWPNPYI
Sbjct: 181 VDPTSYSCLGEFGSYELEDVFYYMPEAESDNTCIYGMEMEWPNPYI 222

[Close]

BLAST of Sed0020162 vs. ExPASy TrEMBL
Match: A0A0A0KWL3 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G043850 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 1.1e-76
Identity = 163/219 (74.43%), Postives = 179/219 (81.74%), Query Frame = 0


Query: 1   MNHQVTEDQQQAVQISQLYTGLYIQMVPQQGNLGEGKARRRRKKNKGSEAEAAA--KKRK 60
           MN Q T+ + Q+VQISQLY GLYIQM+PQQ +LGE K RRRRKKN+GSE EAA+  KKRK
Sbjct: 1   MNQQQTDQEHQSVQISQLYNGLYIQMLPQQVHLGESKPRRRRKKNRGSETEAASGGKKRK 60

Query: 61  LTEEQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYCN 120
           LT  QV LLE+NFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEY N
Sbjct: 61  LTAAQVRLLESNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSN 120

Query: 121 LKKIHESVVVEKCRLENEILKLKEQLSEVVKEKERLIMGERADGPLSSSS-SPL------ 180
           LKK+HESVVVEKCRLE E+LKLKEQL EV KEKER+ MGE  DGPLSSSS SP       
Sbjct: 121 LKKLHESVVVEKCRLETELLKLKEQLLEVEKEKERVRMGEGGDGPLSSSSPSPSMSMEAM 180

Query: 181 ---EPTCLGEFGAIF-EDVFYYMPEDSCIYDMEWPNPYI 207
              +P  LGE   ++ EDVFYYMPE+ CIY MEWPNPY+
Sbjct: 181 EMEQPISLGEISPLYEEDVFYYMPENYCIYGMEWPNPYL 219

[Close]

BLAST of Sed0020162 vs. TAIR 10
Match: AT4G36740.1 (homeobox protein 40 )

HSP 1 Score: 186.8 bits (473), Expect = 1.7e-47
Identity = 116/220 (52.73%), Postives = 150/220 (68.18%), Query Frame = 0


Query: 6   TEDQQQAVQISQLYTGLYIQMVPQQGNLGEGKARRRRKKNKGSEAEAAA-----KKRKLT 65
           T D Q    ISQLY  +Y Q+V Q G + + K  RRRKK KGS A A       +KRKLT
Sbjct: 4   TVDDQNMAFISQLYPDVYTQIV-QPGEVKQPK--RRRKKTKGSVASADGGNGLFRKRKLT 63

Query: 66  EEQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYCNLK 125
           +EQV++LE +FG EHKLESERKDRLA+ELGLDPRQVAVWFQNRRARWKNK+LEEEY  LK
Sbjct: 64  DEQVNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQNRRARWKNKRLEEEYNKLK 123

Query: 126 KIHESVVVEKCRLENEILKLKEQLSEVVKEKERLIMGERADGPLSSSSSPLEPTC----- 185
             H++VVV+KCRLE+E+++LKEQL +  +E +RL   ER +G   SS+SP+  +      
Sbjct: 124 NSHDNVVVDKCRLESEVIQLKEQLYDAEREIQRL--AERVEG--GSSNSPISSSVSVEAN 183

Query: 186 ---------LGEFGAIFEDVFYYMPEDSCIYDMEWPNPYI 207
                    +G+ G  ++ +FY +PE+S I + EW + YI
Sbjct: 184 ETPFFGDYKVGDDGDDYDHLFYPVPENSYIDEAEWMSLYI 216

[Close]

BLAST of Sed0020162 vs. TAIR 10
Match: AT2G18550.1 (homeobox protein 21 )

HSP 1 Score: 164.5 bits (415), Expect = 9.2e-41
Identity = 98/176 (55.68%), Postives = 124/176 (70.45%), Query Frame = 0


Query: 1   MNHQVTEDQQQAVQISQLYTGLYIQMVPQQGNLGEGKARRRRKKNKGS---------EAE 60
           MN+Q  +D    + ISQLY  +Y  +VPQQG  GE K  RRRK+   S         E  
Sbjct: 1   MNNQNVDD-HNLLLISQLYPNVYTPLVPQQG--GEAKPTRRRKRKSKSVVVAEEGENEGN 60

Query: 61  AAAKKRKLTEEQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKK 120
              +KRKL++EQV +LE +F  +HKLESERKDRLASELGLDPRQVAVWFQNRRARWKNK+
Sbjct: 61  GWFRKRKLSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKR 120

Query: 121 LEEEYCNLKKIHESVVVEKCRLENEILKLKEQLSEVVKEKERLIMGERADGPLSSS 168
           +E+EY  LK  +E+ VVEKCRL++E++ LKEQL E  +E +RL   +R +G LS+S
Sbjct: 121 VEDEYTKLKNAYETTVVEKCRLDSEVIHLKEQLYEAEREIQRL--AKRVEGTLSNS 171

[Close]

BLAST of Sed0020162 vs. TAIR 10
Match: AT5G66700.1 (homeobox 53 )

HSP 1 Score: 146.4 bits (368), Expect = 2.6e-35
Identity = 92/185 (49.73%), Postives = 123/185 (66.49%), Query Frame = 0


Query: 39  RRRRKKNKGSEAE---------AAAKKRKLTEEQVHLLETNFGSEHKLESERKDRLASEL 98
           RRR++++KGS A             +KRKLT+EQV++LE +FG+EHKLES RK+++A EL
Sbjct: 46  RRRKRRSKGSSATNEEDVAEIGGMLRKRKLTDEQVNMLEYSFGNEHKLESGRKEKIAGEL 105

Query: 99  GLDPRQVAVWFQNRRARWKNKKLEEEYCNLKKIHESVVVEKCRLENEILKLKEQLSEVVK 158
           GLDPRQVAVWFQNRRARWKNKKLEEEY  LK  H++VV+ +C+LE++ILKL EQLSE   
Sbjct: 106 GLDPRQVAVWFQNRRARWKNKKLEEEYAKLKNHHDNVVLGQCQLESQILKLTEQLSEAQS 165

Query: 159 EKERLIMGERADG-PLSSSSSPLE------PTCLGEFGAIFEDVFYYMPEDSCIYDME-W 207
           E  +L   ER +  P +SSSS L       PT          ++ +YM +++ +  ME W
Sbjct: 166 EIRKL--SERLEEMPTNSSSSSLSVEANNAPTDFELAPETNYNIPFYMLDNNYLQSMEYW 225

[Close]

BLAST of Sed0020162 vs. TAIR 10
Match: AT3G01470.1 (homeobox 1 )

HSP 1 Score: 99.0 bits (245), Expect = 4.8e-21
Identity = 54/97 (55.67%), Postives = 71/97 (73.20%), Query Frame = 0


Query: 55  KKRKLTEEQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEE 114
           KKR+LT EQVHLLE +F +E+KLE ERK +LA +LGL PRQVAVWFQNRRARWK K+LE 
Sbjct: 68  KKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLER 127

Query: 115 EYCNLKKI-------HESVVVEKCRLENEILKLKEQL 145
           +Y  LK         ++S+V++  +L +E+  L E+L
Sbjct: 128 DYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLTEKL 164

[Close]

BLAST of Sed0020162 vs. TAIR 10
Match: AT2G46680.1 (homeobox 7 )

HSP 1 Score: 90.1 bits (222), Expect = 2.2e-18
Identity = 55/119 (46.22%), Postives = 77/119 (64.71%), Query Frame = 0


Query: 56  KRKLTEEQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEE 115
           +R+ ++EQ+  LE  F SE +LE  +K +LA ELGL PRQVA+WFQN+RARWK+K+LE E
Sbjct: 33  QRRFSDEQIKSLEMMFESETRLEPRKKVQLARELGLQPRQVAIWFQNKRARWKSKQLETE 92

Query: 116 -------YCNLKKIHESVVVEKCRLENEILKLKEQLSEVVKEKERLIMGERADGPLSSS 168
                  Y NL    ES+  EK  L +E+ +LKE   +  +E+ER   G++A   LSS+
Sbjct: 93  YNILRQNYDNLASQFESLKKEKQALVSELQRLKEATQKKTQEEERQCSGDQAVVALSST 151

The following BLAST results are available for this feature:

BLAST of Sed0020162 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877287.1	1.7e-84	82.33	homeobox-leucine zipper protein ATHB-40-like [Benincasa hispida]	[more]
KAG7031239.1	1.4e-83	81.40	Homeobox-leucine zipper protein ATHB-40 [Cucurbita argyrosperma subsp. argyrospe...	[more]
XP_022943109.1	3.1e-83	80.93	homeobox-leucine zipper protein ATHB-40-like [Cucurbita moschata]	[more]
XP_023512650.1	7.7e-82	80.00	homeobox-leucine zipper protein ATHB-40-like [Cucurbita pepo subsp. pepo]	[more]
XP_022982706.1	8.6e-81	79.53	homeobox-leucine zipper protein ATHB-40-like [Cucurbita maxima]	[more]

BLAST of Sed0020162 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23208	2.4e-46	52.73	Homeobox-leucine zipper protein ATHB-40 OS=Arabidopsis thaliana OX=3702 GN=ATHB-...	[more]
Q9ZU70	1.3e-39	55.68	Homeobox-leucine zipper protein ATHB-21 OS=Arabidopsis thaliana OX=3702 GN=ATHB-...	[more]
Q9LVR0	3.7e-34	49.73	Homeobox-leucine zipper protein ATHB-53 OS=Arabidopsis thaliana OX=3702 GN=ATHB-...	[more]
A2XDK5	2.2e-26	45.83	Homeobox-leucine zipper protein HOX12 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]
Q10QF2	2.2e-26	45.83	Homeobox-leucine zipper protein HOX12 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]

BLAST of Sed0020162 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FTB2	1.5e-83	80.93	homeobox-leucine zipper protein ATHB-40-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1J034	4.1e-81	79.53	homeobox-leucine zipper protein ATHB-40-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A1S3BY52	1.6e-80	77.52	homeobox-leucine zipper protein ATHB-40 OS=Cucumis melo OX=3656 GN=LOC103494370 ...	[more]
A0A6J1C5L6	3.3e-78	76.55	homeobox-leucine zipper protein ATHB-40-like OS=Momordica charantia OX=3673 GN=L...	[more]
A0A0A0KWL3	1.1e-76	74.43	Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G043850 PE...	[more]

BLAST of Sed0020162 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36740.1	1.7e-47	52.73	homeobox protein 40	[more]
AT2G18550.1	9.2e-41	55.68	homeobox protein 21	[more]
AT5G66700.1	2.6e-35	49.73	homeobox 53	[more]
AT3G01470.1	4.8e-21	55.67	homeobox 1	[more]
AT2G46680.1	2.2e-18	46.22	homeobox 7	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 50..70
None	No IPR available	GENE3D	1.10.10.60		coord: 46..117 e-value: 2.3E-20 score: 73.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..57
None	No IPR available	PANTHER	PTHR24326	HOMEOBOX-LEUCINE ZIPPER PROTEIN	coord: 10..205
None	No IPR available	PANTHER	PTHR24326:SF577	HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-40-LIKE	coord: 10..205
IPR000047	Helix-turn-helix motif	PRINTS	PR00031	HTHREPRESSR	coord: 90..106 score: 58.71 coord: 81..90 score: 46.12
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 53..114 e-value: 2.1E-18 score: 77.1
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 55..109 e-value: 2.0E-17 score: 62.8
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 50..110 score: 17.232224
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 55..111 e-value: 4.9449E-16 score: 67.2684
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 85..108
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 55..116

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0020162.1	Sed0020162.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding