Sed0020143 (gene) Chayote v1

Overview
NameSed0020143
Typegene
OrganismSechium edule (Chayote v1)
DescriptionF-box protein
LocationLG09: 395464 .. 396645 (-)
RNA-Seq ExpressionSed0020143
SyntenySed0020143
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAGCAGGTGGAAAGTAACGTTATAAATTGGGGGCTTCCACTTAAACACCATATCGCTTTGGTTATCTTCTCCAAACTTTCAATCATCAATTTGCCAACGTGCAGGTTAGTTTCTAAATCATGGAATCATCTTGTCTTAAAGTATGCTTCTTCTTCTCCTAAAATCCTTCCAAATGCTATCCTTTTCTCGACCATCGATTACCGCCCCTTCGTCTATGACTTCCAAAATCCAAAGCTTCATTGTTTCGATATTGATACGTTGAGTTTTGTTGCTTCATGTATGCTTGTTGAACCGGACATAGAGTCTCTAAGCATCTACAATTCCTACAATGGTCTCTTGTTTGTTGAAAGAGGTGTTACCACTGATCGTGAGGGCATATTTAATCCGATGACCAATGAATTCTTCCAAACTCCTGTTTGTGAATTACATCATACTTTGTCGACCGGATTTGGTTTCAGCCCTACTACACAACAATACAAATTGTTTAGAGCTCGTGACACTTGCGAGTTGAAAGTTTTAAGGTTTGGTAGGAACAATAACCAATGGTCCTCTGTTTGCCTGCCTTTTCCCCTAATTGTCGAATGTCATGGTGTTTATATGGATGGATTCATTTATTGGATTGGAAAAGAAAAGGAAAATGAGCGTGTCATATATGCTCTTGATGTAGAAACCGAGAGATTTGAAGTGATTTTTGTCCTCGAAGTTGGCCCTCACGCCCACGCTTTCCGACTCCAGCCACTTAATGGTACCATTTATGCAATTATTTTCATGAATAAGCCGTATCAAATCGAAGTGTGGAGGATGCAAAAGAAAGATTCTTGGATTAGAGATTTTATTCTTCCGGGGGTATTTAGAGATAAGGCAATTGGCCTTGTTAAAGTCTCGGATGGAAAGGTATTCCTTCGAATAATAAATAACTTATTTTGTTTGGATAATTATGGGACGAAGGTAGAGAGGAATACGTTGTTTCAAATAATAAACAACATCCTCGAAATAACAAACAACTTCCTTCGAGTTATGATAAATGAATGGTGTAGTTTGGATACGTCTTGGAAGAGGAAGATAAAAACATTGATTCCATTTAATAGGCAATTTAATGGTATTTGTGTTATGGAATCCTTGCATTTTGGTTCTCTCCCTAGCATTCTCGGGTCGGGTGGTGATGAGGATTATTAG

mRNA sequence

ATGGAGAAGCAGGTGGAAAGTAACGTTATAAATTGGGGGCTTCCACTTAAACACCATATCGCTTTGGTTATCTTCTCCAAACTTTCAATCATCAATTTGCCAACGTGCAGGTTAGTTTCTAAATCATGGAATCATCTTGTCTTAAAGTATGCTTCTTCTTCTCCTAAAATCCTTCCAAATGCTATCCTTTTCTCGACCATCGATTACCGCCCCTTCGTCTATGACTTCCAAAATCCAAAGCTTCATTGTTTCGATATTGATACGTTGAGTTTTGTTGCTTCATGTATGCTTGTTGAACCGGACATAGAGTCTCTAAGCATCTACAATTCCTACAATGGTCTCTTGTTTGTTGAAAGAGGTGTTACCACTGATCGTGAGGGCATATTTAATCCGATGACCAATGAATTCTTCCAAACTCCTGTTTGTGAATTACATCATACTTTGTCGACCGGATTTGGTTTCAGCCCTACTACACAACAATACAAATTGTTTAGAGCTCGTGACACTTGCGAGTTGAAAGTTTTAAGGTTTGGTAGGAACAATAACCAATGGTCCTCTGTTTGCCTGCCTTTTCCCCTAATTGTCGAATGTCATGGTGTTTATATGGATGGATTCATTTATTGGATTGGAAAAGAAAAGGAAAATGAGCGTGTCATATATGCTCTTGATGTAGAAACCGAGAGATTTGAAGTGATTTTTGTCCTCGAAGTTGGCCCTCACGCCCACGCTTTCCGACTCCAGCCACTTAATGGTACCATTTATGCAATTATTTTCATGAATAAGCCGTATCAAATCGAAGTGTGGAGGATGCAAAAGAAAGATTCTTGGATTAGAGATTTTATTCTTCCGGGGGTATTTAGAGATAAGGCAATTGGCCTTGTTAAAGTCTCGGATGGAAAGGTATTCCTTCGAATAATAAATAACTTATTTTGTTTGGATAATTATGGGACGAAGGTAGAGAGGAATACGTTGTTTCAAATAATAAACAACATCCTCGAAATAACAAACAACTTCCTTCGAGTTATGATAAATGAATGGTGTAGTTTGGATACGTCTTGGAAGAGGAAGATAAAAACATTGATTCCATTTAATAGGCAATTTAATGGTATTTGTGTTATGGAATCCTTGCATTTTGGTTCTCTCCCTAGCATTCTCGGGTCGGGTGGTGATGAGGATTATTAG

Coding sequence (CDS)

ATGGAGAAGCAGGTGGAAAGTAACGTTATAAATTGGGGGCTTCCACTTAAACACCATATCGCTTTGGTTATCTTCTCCAAACTTTCAATCATCAATTTGCCAACGTGCAGGTTAGTTTCTAAATCATGGAATCATCTTGTCTTAAAGTATGCTTCTTCTTCTCCTAAAATCCTTCCAAATGCTATCCTTTTCTCGACCATCGATTACCGCCCCTTCGTCTATGACTTCCAAAATCCAAAGCTTCATTGTTTCGATATTGATACGTTGAGTTTTGTTGCTTCATGTATGCTTGTTGAACCGGACATAGAGTCTCTAAGCATCTACAATTCCTACAATGGTCTCTTGTTTGTTGAAAGAGGTGTTACCACTGATCGTGAGGGCATATTTAATCCGATGACCAATGAATTCTTCCAAACTCCTGTTTGTGAATTACATCATACTTTGTCGACCGGATTTGGTTTCAGCCCTACTACACAACAATACAAATTGTTTAGAGCTCGTGACACTTGCGAGTTGAAAGTTTTAAGGTTTGGTAGGAACAATAACCAATGGTCCTCTGTTTGCCTGCCTTTTCCCCTAATTGTCGAATGTCATGGTGTTTATATGGATGGATTCATTTATTGGATTGGAAAAGAAAAGGAAAATGAGCGTGTCATATATGCTCTTGATGTAGAAACCGAGAGATTTGAAGTGATTTTTGTCCTCGAAGTTGGCCCTCACGCCCACGCTTTCCGACTCCAGCCACTTAATGGTACCATTTATGCAATTATTTTCATGAATAAGCCGTATCAAATCGAAGTGTGGAGGATGCAAAAGAAAGATTCTTGGATTAGAGATTTTATTCTTCCGGGGGTATTTAGAGATAAGGCAATTGGCCTTGTTAAAGTCTCGGATGGAAAGGTATTCCTTCGAATAATAAATAACTTATTTTGTTTGGATAATTATGGGACGAAGGTAGAGAGGAATACGTTGTTTCAAATAATAAACAACATCCTCGAAATAACAAACAACTTCCTTCGAGTTATGATAAATGAATGGTGTAGTTTGGATACGTCTTGGAAGAGGAAGATAAAAACATTGATTCCATTTAATAGGCAATTTAATGGTATTTGTGTTATGGAATCCTTGCATTTTGGTTCTCTCCCTAGCATTCTCGGGTCGGGTGGTGATGAGGATTATTAG

Protein sequence

MEKQVESNVINWGLPLKHHIALVIFSKLSIINLPTCRLVSKSWNHLVLKYASSSPKILPNAILFSTIDYRPFVYDFQNPKLHCFDIDTLSFVASCMLVEPDIESLSIYNSYNGLLFVERGVTTDREGIFNPMTNEFFQTPVCELHHTLSTGFGFSPTTQQYKLFRARDTCELKVLRFGRNNNQWSSVCLPFPLIVECHGVYMDGFIYWIGKEKENERVIYALDVETERFEVIFVLEVGPHAHAFRLQPLNGTIYAIIFMNKPYQIEVWRMQKKDSWIRDFILPGVFRDKAIGLVKVSDGKVFLRIINNLFCLDNYGTKVERNTLFQIINNILEITNNFLRVMINEWCSLDTSWKRKIKTLIPFNRQFNGICVMESLHFGSLPSILGSGGDEDY
Homology
BLAST of Sed0020143 vs. NCBI nr
Match: XP_008459707.1 (PREDICTED: F-box protein At3g07870-like [Cucumis melo])

HSP 1 Score: 237.7 bits (605), Expect = 1.8e-58
Identity = 149/342 (43.57%), Postives = 201/342 (58.77%), Query Frame = 0

Query: 10  INWGLPLKHHIALVIFSKLSIINLPTCRLVSKSWNHLVLKYASSSPKILPNAILFSTI-- 69
           +N  L L  HI   IFSKLSI NLPTCR+V K+WN+LVL+YASS+ K LP   LF ++  
Sbjct: 12  MNINLRLPPHIVRAIFSKLSISNLPTCRVVCKTWNNLVLEYASST-KFLPTTTLFLSMAD 71

Query: 70  ---DYRPF-VYDFQNPKLHCFDIDTLSFVASCMLVEPDIESLSIYNSYNGLLFVERGVTT 129
              +Y PF    + NPK+HC DID+ +   +    E D   ++I NS NGLL++ +  T 
Sbjct: 72  EISNYIPFKSTPWCNPKIHCVDIDSKTSYVASFGFEGDWSYITIVNSCNGLLYICK-FTF 131

Query: 130 DR--EGIFNPMTNEFFQTPVCELHHTL-STGFGFSPTTQQYKLFRAR-------DTCE-- 189
           D   EGI NPMTNEF + P  E+   + S GFGFSP T+QYKLFR           C   
Sbjct: 132 DSLCEGILNPMTNEFMEIPQPEIELDVHSIGFGFSPRTKQYKLFRTEPEVLENLKKCHYI 191

Query: 190 LKVLRFGRNNNQWSSVCLPFPLIVECHGVYMDGFIYWIGK--EKENERVIYALDVETERF 249
           +++  F     QW       P +V  HG Y++G IYWIGK  EKE E VIYALDV+TE+ 
Sbjct: 192 MEIFTFDNGYKQWRHF-ERLPFVVFHHGQYLNGVIYWIGKKLEKEGEAVIYALDVDTEQM 251

Query: 250 EVIFVLEVGPHAHAFRLQPLNGTIYAII-FMNK-----PYQIEVWRMQKKDSWIRDFILP 309
           E    LE+GP      ++     +YAII  M+K      Y+IE+WRMQKKDSWI++F + 
Sbjct: 252 ECTATLEIGPSLKNGSIKIFEERVYAIISLMDKRVSPTSYKIELWRMQKKDSWIKEFSID 311

Query: 310 GVFRDKAIGLVKV-SDGKVFLRIINNLFCLDNYGTKVERNTL 325
               +++ GL+ V  DG++ + I +N+F LD    K++  TL
Sbjct: 312 ----EESFGLITVFEDGELLIAIKDNIFRLDKSRKKIKIKTL 346

BLAST of Sed0020143 vs. NCBI nr
Match: XP_004141602.1 (F-box protein At3g07870 [Cucumis sativus])

HSP 1 Score: 217.2 bits (552), Expect = 2.5e-52
Identity = 150/424 (35.38%), Postives = 227/424 (53.54%), Query Frame = 0

Query: 1   MEKQVESNVINWGLPLKHHIALVIFSKLSIINLPTCRLVSKSWNHLVLKYASSSPKILPN 60
           MEK      IN GL L  ++  VI  KL+I +LP CRLVS++WNHL+L YASSS K +PN
Sbjct: 1   MEKLECKRNINLGLQLPPNVVEVILPKLTISDLPACRLVSRTWNHLILNYASSS-KFIPN 60

Query: 61  AILFSTIDY------------RPFVYDFQ-NPKLHCFDID-TLSFVASCMLVEPDIE-SL 120
             L ++ +             RP    F+ NPK++C DI+ T + +AS +    D    +
Sbjct: 61  LFLAASYEIHYSRNCNCNPHCRP---TFKCNPKMYCIDINRTNNLIASFVFDNNDWPYKI 120

Query: 121 SIYNSYNGLLFVER-GVTTDREGIFNPMTNEFF----QTPVCELHHTLSTGFGFSPTTQQ 180
            I NS NGLL++ + G      GI NPMTNEFF    Q  V     +   GFGF+  T+Q
Sbjct: 121 KILNSCNGLLYIHKVGDENFCNGILNPMTNEFFILSTQPKVKNEDISCFYGFGFNLKTKQ 180

Query: 181 YKLFRARDTCE-----LKVLRFGRN--NNQWSSV-CLPFPLIVECHGVYMDGFIYWIGKE 240
           YKLF+A    E     ++V+RFG+N    +W  + CLPF  +  C GVY++G IYWIG++
Sbjct: 181 YKLFKAIHDEEDSHLMMEVMRFGKNEETKEWRHLTCLPF--VFYCDGVYLNGVIYWIGRQ 240

Query: 241 KENERVIYALDVETERFEVIFVLEVGP----HAHAFRLQPLNGTIYAIIFMNKP--YQIE 300
           KEN+ VIY+L+VETE+ E I VL+V P      + + +   NG +YA I+++     +++
Sbjct: 241 KENKSVIYSLNVETEKIESITVLKVDPSYNTSDYGYYIGKYNGNLYATIWIHGTCCKKVQ 300

Query: 301 VWRMQKKDSWIRDFILPGV---FRDKAIGLVKV-SDGKVFLRIINNL-FCLDNYGTKVER 360
           +W MQ KD W+++F++  +   + D  + LVK+  DG+ +  + + L  C D  GT++++
Sbjct: 301 LWMMQGKDCWVKEFVVHDIEDRYVDAFLVLVKIFEDGERWFYVGSRLILCYDKTGTQIKK 360

Query: 361 NTLFQIINNILEITNNFLRVMINEWCSLDTSWKRKIKTLIPFNRQFNGICVMESLHFGSL 386
               + ++N                                       +C  +SL+FGSL
Sbjct: 361 KCRMKRVSN-------------------------------GRGNLVGQLCHFDSLNFGSL 387

BLAST of Sed0020143 vs. NCBI nr
Match: XP_038890298.1 (F-box protein At3g07870-like [Benincasa hispida])

HSP 1 Score: 217.2 bits (552), Expect = 2.5e-52
Identity = 152/420 (36.19%), Postives = 216/420 (51.43%), Query Frame = 0

Query: 5   VESNVINWGLPLKHHIALVIFSKLSIINLPTCRLVSKSWNHLVLKYASSS-PKILPNAIL 64
           +ES  +  GLP    I   IFSKL I +LP  RL+SK+WN +VL YA+SS  + L NA  
Sbjct: 1   MESMKLGRGLP--RRIVREIFSKLVISDLPNLRLISKTWNDMVLDYANSSHHEFLTNAFF 60

Query: 65  FSTIDYRPFVYDFQNPKLHCFDIDTLSFV------------ASCMLVEPDIESLSIYNSY 124
            ST D R    D +N K+HC   DT   +            +S +  + +   ++I N  
Sbjct: 61  LSTCDNR---LDPRNLKMHCIRFDTTKHLDVDFDLESEWTKSSSLCFDGEWTFMAIMNYC 120

Query: 125 NGLLFVERGVTTDR-EGIFNPMTNEFFQTPVCELHHTL-STGFGFSPTTQQYKLFRARDT 184
           +GLL + +     R +GIFNPMTNEF Q P  +L + +   GFGF+ TT+QYKLFR  D+
Sbjct: 121 SGLLLICKCANYTRCDGIFNPMTNEFLQVPRGQLDNDIYYFGFGFTTTTKQYKLFRVCDS 180

Query: 185 ----CE------LKVLRFGR-----NNNQWSSVCLPFPLIVECHGVYMDGFIYWIGK--E 244
               CE      + VL F R     N+NQW  +    PL +  +G Y++GFIYWIGK  E
Sbjct: 181 FSRNCEFESGSIMDVLTFSRSGTNANHNQWRYLHY-LPLDIHSNGAYLNGFIYWIGKEEE 240

Query: 245 KENERVIYALDVETERFEVIFVLEVGPHAHAFR---LQPLNGTIYAIIFMNKP--YQIEV 304
           KENE  IY LDVETE+ E+  VLE+ P     +   +Q  N ++YAI  +N+P    I+V
Sbjct: 241 KENEYAIYVLDVETEKIELSIVLEICPPLCTSKVGGMQQFNDSVYAIFLINQPTGNSIQV 300

Query: 305 WRMQKKDSWIRDFILPGVFRD-KAIGLVKV-SDGKVFLRIINNLFCLDNYGTKVERNTLF 364
           WRMQ+KD WIR+F++  +  D   + L+K   DG++   +  + FC              
Sbjct: 301 WRMQEKDLWIREFVVDDIPNDWNVLTLIKAFEDGEILCMVNFDFFC-------------- 360

Query: 365 QIINNILEITNNFLRVMINEWCSLDTSWKRKIKTLIPFNRQFNGICVMESLHFGSLPSIL 386
                               W +  T  K   K +    ++   +C ++SL+FG LP+IL
Sbjct: 361 --------------------WYNPLTGRK---KIITKNEKKIRYVCQIQSLNFGYLPNIL 377

BLAST of Sed0020143 vs. NCBI nr
Match: XP_011660339.1 (putative F-box protein At1g32420 [Cucumis sativus])

HSP 1 Score: 204.5 bits (519), Expect = 1.6e-48
Identity = 151/422 (35.78%), Postives = 206/422 (48.82%), Query Frame = 0

Query: 9   VINWGLPLKHHIALVIFSKLSIINLPTCRLVSKSWNHLVLKYASSSPKILPNAILFSTID 68
           + +W   L   I   IFSKL + NLP CR+V K+WN L+L +ASS+ K L N  +  T D
Sbjct: 3   ITDWVSGLPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHASSASKFLTNDFILFTCD 62

Query: 69  YR---PFVYDFQNPKLHCFDIDTLSFVASCMLVEPDIESLS---------IYNSYNGLLF 128
                P   +  NP +HC   D L       L E ++   S         + NS NGLL 
Sbjct: 63  VLHPFPCPDNHTNPNMHCLRFDNLDLDLDLDL-ELEVNKSSSFEAGVVYKLINSCNGLLL 122

Query: 129 VER------GVTTDREGIFNPMTNEFFQTP---VCELHHTLSTGFGFSPTTQQYKLFRA- 188
           + +      G    R GIFNPMTNEFFQ P   + E H+    GFGF P T+QYKLFR  
Sbjct: 123 IYKLPLCFPGEFLLRVGIFNPMTNEFFQVPHDEIVEYHY----GFGFIPATKQYKLFRVN 182

Query: 189 ----------RDTCELKVLRFGRN------NNQWSSVCLPFPLIVECHGVYMDGFIYWIG 248
                          L VL FGR+       +QW  +    P  VE HG +++G IYW+G
Sbjct: 183 FPLNVRPEEPNSVSHLDVLTFGRSEIIDPKQSQWRRL-YSLPGGVENHGAHVNGVIYWLG 242

Query: 249 KEKE-NERVIYALDVETERFEVIFVLEVGPHAHAFRLQPLNGTIYAIIFMNKPYQIEVWR 308
           + KE NE V+Y LDVETE+ ++  VLEV  +     +Q  NGT+YA+  M +  Q  VWR
Sbjct: 243 EGKEQNEYVVYTLDVETEKIQLSAVLEV-VNPMWMSIQQFNGTVYAVFHMEEATQ--VWR 302

Query: 309 MQKKDSWIRDFILPGVFRDKAIGLVKVSDGKVFLRIINNLFCLDNYGTKVERNTLFQIIN 368
           MQ+K+SWIRDF++     D  + LVK  +    L ++              + T+F    
Sbjct: 303 MQEKNSWIRDFVID----DCNLTLVKAYENGEMLCMV--------------KPTVF---- 362

Query: 369 NILEITNNFLRVMINEWCSLDTSWKRKIKTLIPFNRQFNGICVMESLHFGSLPSILGSGG 392
                           W    ++  +K+ +L    + F GIC +E L+FGSL +IL   G
Sbjct: 363 ----------------WLYNPSTGSKKVLSLRNEKKIFLGICHLE-LNFGSLLNIL--AG 374

BLAST of Sed0020143 vs. NCBI nr
Match: XP_038879760.1 (uncharacterized protein LOC120071509 [Benincasa hispida])

HSP 1 Score: 204.1 bits (518), Expect = 2.2e-48
Identity = 122/309 (39.48%), Postives = 172/309 (55.66%), Query Frame = 0

Query: 9   VINWGLPLKHHIALVIFSKLSIINLPTCRLVSKSWNHLVLKYASSSPKILPNAILFSTID 68
           ++NWG  L+  I   IF +L + NL TCR+V K+WN L+L Y+SSS K+L N  +  T D
Sbjct: 3   IVNWGRELQEDIGESIFGRLVVSNLATCRVVCKTWNSLILDYSSSS-KLLTNDFILFTRD 62

Query: 69  YRPFV--YDFQNPKLHCFDIDTLSFVA---------SCMLVEPDIESLSIYNSYNGLLFV 128
             P        NPK+HCF +D L   +         + +  + D   +    S NGLL +
Sbjct: 63  GNPICGSSSLYNPKMHCFRLDDLDVDSDMEFEVNKFASLRFDGDWSFILPIRSCNGLLLI 122

Query: 129 ERGV-TTDREGIFNPMTNEFFQTPVCELH-HTLSTGFGFSPTTQQYKLFRARDTCE---- 188
            +        GIFNPMTNEFF+ P      +    GFGF PTT+ YKLFR     E    
Sbjct: 123 SKSTFYCSCMGIFNPMTNEFFRVPRDNFDANKYVYGFGFIPTTKHYKLFRITIEDEPSYS 182

Query: 189 --LKVLRFGR---------NNNQWSSVCLPFPLIVECHGVYMDGFIYWIGKEK--ENERV 248
             ++VL FGR         + NQW  +    P  + C G Y +G IYW+G+EK  +NE V
Sbjct: 183 SRMEVLTFGRGGINPNPKQSQNQWRHL-YSIPSDICCKGAYFNGIIYWLGREKDEQNEYV 242

Query: 249 IYALDVETERFEVIFVLEVGPHAHAFR--LQPLNGTIYAIIFMNKP---YQIEVWRMQKK 283
           IY LDVE+E+ ++  VL+VGP +H  +  +Q  NG++YAI  +  P    +I+VW+M++K
Sbjct: 243 IYTLDVESEKIKLSAVLKVGPFSHYNKVYIQQFNGSVYAIFHILPPTTNERIQVWKMEEK 302

BLAST of Sed0020143 vs. ExPASy TrEMBL
Match: A0A1S3CB99 (F-box protein At3g07870-like OS=Cucumis melo OX=3656 GN=LOC103498749 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 8.5e-59
Identity = 149/342 (43.57%), Postives = 201/342 (58.77%), Query Frame = 0

Query: 10  INWGLPLKHHIALVIFSKLSIINLPTCRLVSKSWNHLVLKYASSSPKILPNAILFSTI-- 69
           +N  L L  HI   IFSKLSI NLPTCR+V K+WN+LVL+YASS+ K LP   LF ++  
Sbjct: 12  MNINLRLPPHIVRAIFSKLSISNLPTCRVVCKTWNNLVLEYASST-KFLPTTTLFLSMAD 71

Query: 70  ---DYRPF-VYDFQNPKLHCFDIDTLSFVASCMLVEPDIESLSIYNSYNGLLFVERGVTT 129
              +Y PF    + NPK+HC DID+ +   +    E D   ++I NS NGLL++ +  T 
Sbjct: 72  EISNYIPFKSTPWCNPKIHCVDIDSKTSYVASFGFEGDWSYITIVNSCNGLLYICK-FTF 131

Query: 130 DR--EGIFNPMTNEFFQTPVCELHHTL-STGFGFSPTTQQYKLFRAR-------DTCE-- 189
           D   EGI NPMTNEF + P  E+   + S GFGFSP T+QYKLFR           C   
Sbjct: 132 DSLCEGILNPMTNEFMEIPQPEIELDVHSIGFGFSPRTKQYKLFRTEPEVLENLKKCHYI 191

Query: 190 LKVLRFGRNNNQWSSVCLPFPLIVECHGVYMDGFIYWIGK--EKENERVIYALDVETERF 249
           +++  F     QW       P +V  HG Y++G IYWIGK  EKE E VIYALDV+TE+ 
Sbjct: 192 MEIFTFDNGYKQWRHF-ERLPFVVFHHGQYLNGVIYWIGKKLEKEGEAVIYALDVDTEQM 251

Query: 250 EVIFVLEVGPHAHAFRLQPLNGTIYAII-FMNK-----PYQIEVWRMQKKDSWIRDFILP 309
           E    LE+GP      ++     +YAII  M+K      Y+IE+WRMQKKDSWI++F + 
Sbjct: 252 ECTATLEIGPSLKNGSIKIFEERVYAIISLMDKRVSPTSYKIELWRMQKKDSWIKEFSID 311

Query: 310 GVFRDKAIGLVKV-SDGKVFLRIINNLFCLDNYGTKVERNTL 325
               +++ GL+ V  DG++ + I +N+F LD    K++  TL
Sbjct: 312 ----EESFGLITVFEDGELLIAIKDNIFRLDKSRKKIKIKTL 346

BLAST of Sed0020143 vs. ExPASy TrEMBL
Match: A0A0A0KSJ2 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G643290 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.2e-52
Identity = 150/424 (35.38%), Postives = 227/424 (53.54%), Query Frame = 0

Query: 1   MEKQVESNVINWGLPLKHHIALVIFSKLSIINLPTCRLVSKSWNHLVLKYASSSPKILPN 60
           MEK      IN GL L  ++  VI  KL+I +LP CRLVS++WNHL+L YASSS K +PN
Sbjct: 1   MEKLECKRNINLGLQLPPNVVEVILPKLTISDLPACRLVSRTWNHLILNYASSS-KFIPN 60

Query: 61  AILFSTIDY------------RPFVYDFQ-NPKLHCFDID-TLSFVASCMLVEPDIE-SL 120
             L ++ +             RP    F+ NPK++C DI+ T + +AS +    D    +
Sbjct: 61  LFLAASYEIHYSRNCNCNPHCRP---TFKCNPKMYCIDINRTNNLIASFVFDNNDWPYKI 120

Query: 121 SIYNSYNGLLFVER-GVTTDREGIFNPMTNEFF----QTPVCELHHTLSTGFGFSPTTQQ 180
            I NS NGLL++ + G      GI NPMTNEFF    Q  V     +   GFGF+  T+Q
Sbjct: 121 KILNSCNGLLYIHKVGDENFCNGILNPMTNEFFILSTQPKVKNEDISCFYGFGFNLKTKQ 180

Query: 181 YKLFRARDTCE-----LKVLRFGRN--NNQWSSV-CLPFPLIVECHGVYMDGFIYWIGKE 240
           YKLF+A    E     ++V+RFG+N    +W  + CLPF  +  C GVY++G IYWIG++
Sbjct: 181 YKLFKAIHDEEDSHLMMEVMRFGKNEETKEWRHLTCLPF--VFYCDGVYLNGVIYWIGRQ 240

Query: 241 KENERVIYALDVETERFEVIFVLEVGP----HAHAFRLQPLNGTIYAIIFMNKP--YQIE 300
           KEN+ VIY+L+VETE+ E I VL+V P      + + +   NG +YA I+++     +++
Sbjct: 241 KENKSVIYSLNVETEKIESITVLKVDPSYNTSDYGYYIGKYNGNLYATIWIHGTCCKKVQ 300

Query: 301 VWRMQKKDSWIRDFILPGV---FRDKAIGLVKV-SDGKVFLRIINNL-FCLDNYGTKVER 360
           +W MQ KD W+++F++  +   + D  + LVK+  DG+ +  + + L  C D  GT++++
Sbjct: 301 LWMMQGKDCWVKEFVVHDIEDRYVDAFLVLVKIFEDGERWFYVGSRLILCYDKTGTQIKK 360

Query: 361 NTLFQIINNILEITNNFLRVMINEWCSLDTSWKRKIKTLIPFNRQFNGICVMESLHFGSL 386
               + ++N                                       +C  +SL+FGSL
Sbjct: 361 KCRMKRVSN-------------------------------GRGNLVGQLCHFDSLNFGSL 387

BLAST of Sed0020143 vs. ExPASy TrEMBL
Match: A0A0A0LWG1 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G257290 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.0e-51
Identity = 153/380 (40.26%), Postives = 207/380 (54.47%), Query Frame = 0

Query: 1   MEKQVES-------NVINWGLPLKHHIALVIFSKLSIINLPTCRLVSKSWNHLVLKYASS 60
           ME+Q+E+         IN G  L   IA  IFSKL I +LP+CRLVS +WN LVL YASS
Sbjct: 4   MERQIENMEISERRMTINCGKGLPPLIAKTIFSKLVISDLPSCRLVSNTWNDLVLDYASS 63

Query: 61  SP-KILPNAILFSTIDYRPFVYDFQNPKLHCFDIDT--LSFVASCMLVEPDIESLSIY-- 120
           +  + L NA L ST D R   Y   NPK+HC ++DT  LS      L    I+S S+   
Sbjct: 64  TQLQFLKNAFLLSTSD-RGLNYKLCNPKMHCINLDTRQLSNDFDFDLESEFIKSASLQFD 123

Query: 121 ----------NSYNGLLFVER-GVTTDREGIFNPMTNEFFQTPVCELHHTLST----GFG 180
                      S NGL+ + +    T  +GIFNPMTNEF Q      H T       GFG
Sbjct: 124 GDWTYTIIMAGSCNGLMLISKCSDYTWCQGIFNPMTNEFLQV---SEHGTFDDFYLYGFG 183

Query: 181 FSPTTQQYKLFRARD---TCE-----------LKVLRFGRN--------NNQWSSV-CLP 240
           FSP T+QYKLFR  D    C            ++VL FGR+        +NQW  +  LP
Sbjct: 184 FSPITKQYKLFRVFDKGFRCRRTSSTVDTHYTMEVLTFGRSGTNHSIPIHNQWRRLHTLP 243

Query: 241 FPLIVECHGVYMDGFIYWI----GKEKENERVIYALDVETERFEVIFVLEVGPHAHAFRL 300
           F ++ +  GVY++G IYW+    GK+KE + VIYALDVETE  E+  VL+V  + +  ++
Sbjct: 244 FEIVAD--GVYLNGIIYWLVKEKGKDKEKKYVIYALDVETEHIEMTVVLQVPSNGYG-KI 303

Query: 301 QPLNGTIYAIIFMN---KPYQIEVWRMQKKDSWIRDFILPGVFRDKA-IGLVKVSDGKVF 322
              NGTIYA   +N       I+VWRMQ+KDSW+R F++  + R+   + L+K+ + +  
Sbjct: 304 HQFNGTIYATFHINWEKDSRTIQVWRMQEKDSWVRKFVICDISREWIHLQLIKMFEDEEI 363

BLAST of Sed0020143 vs. ExPASy TrEMBL
Match: A0A0A0LPC6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G014420 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.3e-51
Identity = 158/433 (36.49%), Postives = 217/433 (50.12%), Query Frame = 0

Query: 10  INWGLPLKHHIALVIFSKLSIINLPTCRLVSKSWNHLVLKYASSSP-KILPNAILFSTID 69
           I+WG  L   IA  IFSKL I NLP+CR V K+WNHLVL YASS+  + L NA L ST D
Sbjct: 36  IDWGKGLPPLIAKTIFSKLVISNLPSCRFVCKTWNHLVLHYASSTQLQFLTNAFLLSTSD 95

Query: 70  YRPFVYDFQNPKLHCFDIDTLSFVASCMLVEPDIE-------SLSIYNSY---------- 129
            R   Y+  NPK+HC ++D      S   V+ D+E       SL  Y  +          
Sbjct: 96  -RMLNYELCNPKMHCINLDNRQ---SSNDVDFDLEWEFIKSGSLQFYGDWTFMILLAHPC 155

Query: 130 NGLLFVER-GVTTDREGIFNPMTNEFFQTPVCELHHTL-STGFGFSPTTQQYKLFRARDT 189
           NGL+F+ +    T  +GIFNPMTNEFFQ    +        GFG S  ++QYKLFR  + 
Sbjct: 156 NGLMFISKCSDYTWCQGIFNPMTNEFFQVSEQDTFDDFYHYGFGLSAISKQYKLFRVSEA 215

Query: 190 C-------------------ELKVLRFGRN-------NNQWSSV-CLPFPLIVECHGVYM 249
                                ++VL FGR+       +NQW  +  L   LI   HGVY+
Sbjct: 216 IPYSERFRLMITFGRDDTHYTMEVLTFGRSGTNHIPIHNQWRHLHNLSCDLI---HGVYL 275

Query: 250 DGFIYWIGKEK----ENERVIYALDVETERFEVIFVLEVGPHAHAFRLQPLNGTIYAIIF 309
           +G IYW+GKEK    + E VIYALDVETE+ E+  +L+V   A   ++ P NGTIYA+ +
Sbjct: 276 NGIIYWLGKEKGKKEKKEYVIYALDVETEQIEMSVILQV--QASDGKMHPFNGTIYALFY 335

Query: 310 MN---KPYQIEVWRMQKKDSWIRDFILPGVFRD-KAIGLVKV-SDGKVFLRIINNLFCLD 369
           +N       I+VW MQ+K SWIR F++  + ++   + L+K+  DG++   I ++ FC  
Sbjct: 336 INWEKDSRTIQVWSMQEKCSWIRQFVIRDISKEWGCLELIKIFEDGEILFLIDSDFFCF- 395

Query: 370 NYGTKVERNTLFQIINNILEITNNFLRVMINEWCSLDTSWKRKIKTLIPFNRQFNG-ICV 386
            Y    E+                                    K +I  N++ N  +C 
Sbjct: 396 -YHPLTEK------------------------------------KRIISKNQKKNRFVCQ 421

BLAST of Sed0020143 vs. ExPASy TrEMBL
Match: A0A0A0LSE0 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G011590 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 8.0e-49
Identity = 151/422 (35.78%), Postives = 206/422 (48.82%), Query Frame = 0

Query: 9   VINWGLPLKHHIALVIFSKLSIINLPTCRLVSKSWNHLVLKYASSSPKILPNAILFSTID 68
           + +W   L   I   IFSKL + NLP CR+V K+WN L+L +ASS+ K L N  +  T D
Sbjct: 3   ITDWVSGLPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHASSASKFLTNDFILFTCD 62

Query: 69  YR---PFVYDFQNPKLHCFDIDTLSFVASCMLVEPDIESLS---------IYNSYNGLLF 128
                P   +  NP +HC   D L       L E ++   S         + NS NGLL 
Sbjct: 63  VLHPFPCPDNHTNPNMHCLRFDNLDLDLDLDL-ELEVNKSSSFEAGVVYKLINSCNGLLL 122

Query: 129 VER------GVTTDREGIFNPMTNEFFQTP---VCELHHTLSTGFGFSPTTQQYKLFRA- 188
           + +      G    R GIFNPMTNEFFQ P   + E H+    GFGF P T+QYKLFR  
Sbjct: 123 IYKLPLCFPGEFLLRVGIFNPMTNEFFQVPHDEIVEYHY----GFGFIPATKQYKLFRVN 182

Query: 189 ----------RDTCELKVLRFGRN------NNQWSSVCLPFPLIVECHGVYMDGFIYWIG 248
                          L VL FGR+       +QW  +    P  VE HG +++G IYW+G
Sbjct: 183 FPLNVRPEEPNSVSHLDVLTFGRSEIIDPKQSQWRRL-YSLPGGVENHGAHVNGVIYWLG 242

Query: 249 KEKE-NERVIYALDVETERFEVIFVLEVGPHAHAFRLQPLNGTIYAIIFMNKPYQIEVWR 308
           + KE NE V+Y LDVETE+ ++  VLEV  +     +Q  NGT+YA+  M +  Q  VWR
Sbjct: 243 EGKEQNEYVVYTLDVETEKIQLSAVLEV-VNPMWMSIQQFNGTVYAVFHMEEATQ--VWR 302

Query: 309 MQKKDSWIRDFILPGVFRDKAIGLVKVSDGKVFLRIINNLFCLDNYGTKVERNTLFQIIN 368
           MQ+K+SWIRDF++     D  + LVK  +    L ++              + T+F    
Sbjct: 303 MQEKNSWIRDFVID----DCNLTLVKAYENGEMLCMV--------------KPTVF---- 362

Query: 369 NILEITNNFLRVMINEWCSLDTSWKRKIKTLIPFNRQFNGICVMESLHFGSLPSILGSGG 392
                           W    ++  +K+ +L    + F GIC +E L+FGSL +IL   G
Sbjct: 363 ----------------WLYNPSTGSKKVLSLRNEKKIFLGICHLE-LNFGSLLNIL--AG 374

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008459707.11.8e-5843.57PREDICTED: F-box protein At3g07870-like [Cucumis melo][more]
XP_004141602.12.5e-5235.38F-box protein At3g07870 [Cucumis sativus][more]
XP_038890298.12.5e-5236.19F-box protein At3g07870-like [Benincasa hispida][more]
XP_011660339.11.6e-4835.78putative F-box protein At1g32420 [Cucumis sativus][more]
XP_038879760.12.2e-4839.48uncharacterized protein LOC120071509 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S3CB998.5e-5943.57F-box protein At3g07870-like OS=Cucumis melo OX=3656 GN=LOC103498749 PE=4 SV=1[more]
A0A0A0KSJ21.2e-5235.38F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G643290 PE=4 ... [more]
A0A0A0LWG11.0e-5140.26F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G257290 PE=4 ... [more]
A0A0A0LPC61.3e-5136.49Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G014420 PE=4 SV=1[more]
A0A0A0LSE08.0e-4935.78F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G011590 PE=4 ... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainPFAMPF00646F-boxcoord: 20..47
e-value: 2.6E-4
score: 20.8
IPR013187F-box associated domain, type 3PFAMPF08268FBA_3coord: 199..284
e-value: 3.6E-5
score: 23.7
IPR017451F-box associated interaction domainTIGRFAMTIGR01640TIGR01640coord: 110..292
e-value: 2.3E-20
score: 70.9
NoneNo IPR availablePANTHERPTHR47993:SF20F-BOX FAMILY PROTEINcoord: 19..289
NoneNo IPR availablePANTHERPTHR47993OS09G0372900 PROTEIN-RELATEDcoord: 19..289
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 14..80
IPR011043Galactose oxidase/kelch, beta-propellerSUPERFAMILY50965Galactose oxidase, central domaincoord: 81..303

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0020143.1Sed0020143.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding