Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSexonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAGCAGGTGGAAAGTAACGTTATAAATTGGGGGCTTCCACTTAAACACCATATCGCTTTGGTTATCTTCTCCAAACTTTCAATCATCAATTTGCCAACGTGCAGGTTAGTTTCTAAATCATGGAATCATCTTGTCTTAAAGTATGCTTCTTCTTCTCCTAAAATCCTTCCAAATGCTATCCTTTTCTCGACCATCGATTACCGCCCCTTCGTCTATGACTTCCAAAATCCAAAGCTTCATTGTTTCGATATTGATACGTTGAGTTTTGTTGCTTCATGTATGCTTGTTGAACCGGACATAGAGTCTCTAAGCATCTACAATTCCTACAATGGTCTCTTGTTTGTTGAAAGAGGTGTTACCACTGATCGTGAGGGCATATTTAATCCGATGACCAATGAATTCTTCCAAACTCCTGTTTGTGAATTACATCATACTTTGTCGACCGGATTTGGTTTCAGCCCTACTACACAACAATACAAATTGTTTAGAGCTCGTGACACTTGCGAGTTGAAAGTTTTAAGGTTTGGTAGGAACAATAACCAATGGTCCTCTGTTTGCCTGCCTTTTCCCCTAATTGTCGAATGTCATGGTGTTTATATGGATGGATTCATTTATTGGATTGGAAAAGAAAAGGAAAATGAGCGTGTCATATATGCTCTTGATGTAGAAACCGAGAGATTTGAAGTGATTTTTGTCCTCGAAGTTGGCCCTCACGCCCACGCTTTCCGACTCCAGCCACTTAATGGTACCATTTATGCAATTATTTTCATGAATAAGCCGTATCAAATCGAAGTGTGGAGGATGCAAAAGAAAGATTCTTGGATTAGAGATTTTATTCTTCCGGGGGTATTTAGAGATAAGGCAATTGGCCTTGTTAAAGTCTCGGATGGAAAGGTATTCCTTCGAATAATAAATAACTTATTTTGTTTGGATAATTATGGGACGAAGGTAGAGAGGAATACGTTGTTTCAAATAATAAACAACATCCTCGAAATAACAAACAACTTCCTTCGAGTTATGATAAATGAATGGTGTAGTTTGGATACGTCTTGGAAGAGGAAGATAAAAACATTGATTCCATTTAATAGGCAATTTAATGGTATTTGTGTTATGGAATCCTTGCATTTTGGTTCTCTCCCTAGCATTCTCGGGTCGGGTGGTGATGAGGATTATTAG
mRNA sequence
ATGGAGAAGCAGGTGGAAAGTAACGTTATAAATTGGGGGCTTCCACTTAAACACCATATCGCTTTGGTTATCTTCTCCAAACTTTCAATCATCAATTTGCCAACGTGCAGGTTAGTTTCTAAATCATGGAATCATCTTGTCTTAAAGTATGCTTCTTCTTCTCCTAAAATCCTTCCAAATGCTATCCTTTTCTCGACCATCGATTACCGCCCCTTCGTCTATGACTTCCAAAATCCAAAGCTTCATTGTTTCGATATTGATACGTTGAGTTTTGTTGCTTCATGTATGCTTGTTGAACCGGACATAGAGTCTCTAAGCATCTACAATTCCTACAATGGTCTCTTGTTTGTTGAAAGAGGTGTTACCACTGATCGTGAGGGCATATTTAATCCGATGACCAATGAATTCTTCCAAACTCCTGTTTGTGAATTACATCATACTTTGTCGACCGGATTTGGTTTCAGCCCTACTACACAACAATACAAATTGTTTAGAGCTCGTGACACTTGCGAGTTGAAAGTTTTAAGGTTTGGTAGGAACAATAACCAATGGTCCTCTGTTTGCCTGCCTTTTCCCCTAATTGTCGAATGTCATGGTGTTTATATGGATGGATTCATTTATTGGATTGGAAAAGAAAAGGAAAATGAGCGTGTCATATATGCTCTTGATGTAGAAACCGAGAGATTTGAAGTGATTTTTGTCCTCGAAGTTGGCCCTCACGCCCACGCTTTCCGACTCCAGCCACTTAATGGTACCATTTATGCAATTATTTTCATGAATAAGCCGTATCAAATCGAAGTGTGGAGGATGCAAAAGAAAGATTCTTGGATTAGAGATTTTATTCTTCCGGGGGTATTTAGAGATAAGGCAATTGGCCTTGTTAAAGTCTCGGATGGAAAGGTATTCCTTCGAATAATAAATAACTTATTTTGTTTGGATAATTATGGGACGAAGGTAGAGAGGAATACGTTGTTTCAAATAATAAACAACATCCTCGAAATAACAAACAACTTCCTTCGAGTTATGATAAATGAATGGTGTAGTTTGGATACGTCTTGGAAGAGGAAGATAAAAACATTGATTCCATTTAATAGGCAATTTAATGGTATTTGTGTTATGGAATCCTTGCATTTTGGTTCTCTCCCTAGCATTCTCGGGTCGGGTGGTGATGAGGATTATTAG
Coding sequence (CDS)
ATGGAGAAGCAGGTGGAAAGTAACGTTATAAATTGGGGGCTTCCACTTAAACACCATATCGCTTTGGTTATCTTCTCCAAACTTTCAATCATCAATTTGCCAACGTGCAGGTTAGTTTCTAAATCATGGAATCATCTTGTCTTAAAGTATGCTTCTTCTTCTCCTAAAATCCTTCCAAATGCTATCCTTTTCTCGACCATCGATTACCGCCCCTTCGTCTATGACTTCCAAAATCCAAAGCTTCATTGTTTCGATATTGATACGTTGAGTTTTGTTGCTTCATGTATGCTTGTTGAACCGGACATAGAGTCTCTAAGCATCTACAATTCCTACAATGGTCTCTTGTTTGTTGAAAGAGGTGTTACCACTGATCGTGAGGGCATATTTAATCCGATGACCAATGAATTCTTCCAAACTCCTGTTTGTGAATTACATCATACTTTGTCGACCGGATTTGGTTTCAGCCCTACTACACAACAATACAAATTGTTTAGAGCTCGTGACACTTGCGAGTTGAAAGTTTTAAGGTTTGGTAGGAACAATAACCAATGGTCCTCTGTTTGCCTGCCTTTTCCCCTAATTGTCGAATGTCATGGTGTTTATATGGATGGATTCATTTATTGGATTGGAAAAGAAAAGGAAAATGAGCGTGTCATATATGCTCTTGATGTAGAAACCGAGAGATTTGAAGTGATTTTTGTCCTCGAAGTTGGCCCTCACGCCCACGCTTTCCGACTCCAGCCACTTAATGGTACCATTTATGCAATTATTTTCATGAATAAGCCGTATCAAATCGAAGTGTGGAGGATGCAAAAGAAAGATTCTTGGATTAGAGATTTTATTCTTCCGGGGGTATTTAGAGATAAGGCAATTGGCCTTGTTAAAGTCTCGGATGGAAAGGTATTCCTTCGAATAATAAATAACTTATTTTGTTTGGATAATTATGGGACGAAGGTAGAGAGGAATACGTTGTTTCAAATAATAAACAACATCCTCGAAATAACAAACAACTTCCTTCGAGTTATGATAAATGAATGGTGTAGTTTGGATACGTCTTGGAAGAGGAAGATAAAAACATTGATTCCATTTAATAGGCAATTTAATGGTATTTGTGTTATGGAATCCTTGCATTTTGGTTCTCTCCCTAGCATTCTCGGGTCGGGTGGTGATGAGGATTATTAG
Protein sequence
MEKQVESNVINWGLPLKHHIALVIFSKLSIINLPTCRLVSKSWNHLVLKYASSSPKILPNAILFSTIDYRPFVYDFQNPKLHCFDIDTLSFVASCMLVEPDIESLSIYNSYNGLLFVERGVTTDREGIFNPMTNEFFQTPVCELHHTLSTGFGFSPTTQQYKLFRARDTCELKVLRFGRNNNQWSSVCLPFPLIVECHGVYMDGFIYWIGKEKENERVIYALDVETERFEVIFVLEVGPHAHAFRLQPLNGTIYAIIFMNKPYQIEVWRMQKKDSWIRDFILPGVFRDKAIGLVKVSDGKVFLRIINNLFCLDNYGTKVERNTLFQIINNILEITNNFLRVMINEWCSLDTSWKRKIKTLIPFNRQFNGICVMESLHFGSLPSILGSGGDEDY
Homology
BLAST of Sed0020143 vs. NCBI nr
Match:
XP_008459707.1 (PREDICTED: F-box protein At3g07870-like [Cucumis melo])
HSP 1 Score: 237.7 bits (605), Expect = 1.8e-58
Identity = 149/342 (43.57%), Postives = 201/342 (58.77%), Query Frame = 0
Query: 10 INWGLPLKHHIALVIFSKLSIINLPTCRLVSKSWNHLVLKYASSSPKILPNAILFSTI-- 69
+N L L HI IFSKLSI NLPTCR+V K+WN+LVL+YASS+ K LP LF ++
Sbjct: 12 MNINLRLPPHIVRAIFSKLSISNLPTCRVVCKTWNNLVLEYASST-KFLPTTTLFLSMAD 71
Query: 70 ---DYRPF-VYDFQNPKLHCFDIDTLSFVASCMLVEPDIESLSIYNSYNGLLFVERGVTT 129
+Y PF + NPK+HC DID+ + + E D ++I NS NGLL++ + T
Sbjct: 72 EISNYIPFKSTPWCNPKIHCVDIDSKTSYVASFGFEGDWSYITIVNSCNGLLYICK-FTF 131
Query: 130 DR--EGIFNPMTNEFFQTPVCELHHTL-STGFGFSPTTQQYKLFRAR-------DTCE-- 189
D EGI NPMTNEF + P E+ + S GFGFSP T+QYKLFR C
Sbjct: 132 DSLCEGILNPMTNEFMEIPQPEIELDVHSIGFGFSPRTKQYKLFRTEPEVLENLKKCHYI 191
Query: 190 LKVLRFGRNNNQWSSVCLPFPLIVECHGVYMDGFIYWIGK--EKENERVIYALDVETERF 249
+++ F QW P +V HG Y++G IYWIGK EKE E VIYALDV+TE+
Sbjct: 192 MEIFTFDNGYKQWRHF-ERLPFVVFHHGQYLNGVIYWIGKKLEKEGEAVIYALDVDTEQM 251
Query: 250 EVIFVLEVGPHAHAFRLQPLNGTIYAII-FMNK-----PYQIEVWRMQKKDSWIRDFILP 309
E LE+GP ++ +YAII M+K Y+IE+WRMQKKDSWI++F +
Sbjct: 252 ECTATLEIGPSLKNGSIKIFEERVYAIISLMDKRVSPTSYKIELWRMQKKDSWIKEFSID 311
Query: 310 GVFRDKAIGLVKV-SDGKVFLRIINNLFCLDNYGTKVERNTL 325
+++ GL+ V DG++ + I +N+F LD K++ TL
Sbjct: 312 ----EESFGLITVFEDGELLIAIKDNIFRLDKSRKKIKIKTL 346
BLAST of Sed0020143 vs. NCBI nr
Match:
XP_004141602.1 (F-box protein At3g07870 [Cucumis sativus])
HSP 1 Score: 217.2 bits (552), Expect = 2.5e-52
Identity = 150/424 (35.38%), Postives = 227/424 (53.54%), Query Frame = 0
Query: 1 MEKQVESNVINWGLPLKHHIALVIFSKLSIINLPTCRLVSKSWNHLVLKYASSSPKILPN 60
MEK IN GL L ++ VI KL+I +LP CRLVS++WNHL+L YASSS K +PN
Sbjct: 1 MEKLECKRNINLGLQLPPNVVEVILPKLTISDLPACRLVSRTWNHLILNYASSS-KFIPN 60
Query: 61 AILFSTIDY------------RPFVYDFQ-NPKLHCFDID-TLSFVASCMLVEPDIE-SL 120
L ++ + RP F+ NPK++C DI+ T + +AS + D +
Sbjct: 61 LFLAASYEIHYSRNCNCNPHCRP---TFKCNPKMYCIDINRTNNLIASFVFDNNDWPYKI 120
Query: 121 SIYNSYNGLLFVER-GVTTDREGIFNPMTNEFF----QTPVCELHHTLSTGFGFSPTTQQ 180
I NS NGLL++ + G GI NPMTNEFF Q V + GFGF+ T+Q
Sbjct: 121 KILNSCNGLLYIHKVGDENFCNGILNPMTNEFFILSTQPKVKNEDISCFYGFGFNLKTKQ 180
Query: 181 YKLFRARDTCE-----LKVLRFGRN--NNQWSSV-CLPFPLIVECHGVYMDGFIYWIGKE 240
YKLF+A E ++V+RFG+N +W + CLPF + C GVY++G IYWIG++
Sbjct: 181 YKLFKAIHDEEDSHLMMEVMRFGKNEETKEWRHLTCLPF--VFYCDGVYLNGVIYWIGRQ 240
Query: 241 KENERVIYALDVETERFEVIFVLEVGP----HAHAFRLQPLNGTIYAIIFMNKP--YQIE 300
KEN+ VIY+L+VETE+ E I VL+V P + + + NG +YA I+++ +++
Sbjct: 241 KENKSVIYSLNVETEKIESITVLKVDPSYNTSDYGYYIGKYNGNLYATIWIHGTCCKKVQ 300
Query: 301 VWRMQKKDSWIRDFILPGV---FRDKAIGLVKV-SDGKVFLRIINNL-FCLDNYGTKVER 360
+W MQ KD W+++F++ + + D + LVK+ DG+ + + + L C D GT++++
Sbjct: 301 LWMMQGKDCWVKEFVVHDIEDRYVDAFLVLVKIFEDGERWFYVGSRLILCYDKTGTQIKK 360
Query: 361 NTLFQIINNILEITNNFLRVMINEWCSLDTSWKRKIKTLIPFNRQFNGICVMESLHFGSL 386
+ ++N +C +SL+FGSL
Sbjct: 361 KCRMKRVSN-------------------------------GRGNLVGQLCHFDSLNFGSL 387
BLAST of Sed0020143 vs. NCBI nr
Match:
XP_038890298.1 (F-box protein At3g07870-like [Benincasa hispida])
HSP 1 Score: 217.2 bits (552), Expect = 2.5e-52
Identity = 152/420 (36.19%), Postives = 216/420 (51.43%), Query Frame = 0
Query: 5 VESNVINWGLPLKHHIALVIFSKLSIINLPTCRLVSKSWNHLVLKYASSS-PKILPNAIL 64
+ES + GLP I IFSKL I +LP RL+SK+WN +VL YA+SS + L NA
Sbjct: 1 MESMKLGRGLP--RRIVREIFSKLVISDLPNLRLISKTWNDMVLDYANSSHHEFLTNAFF 60
Query: 65 FSTIDYRPFVYDFQNPKLHCFDIDTLSFV------------ASCMLVEPDIESLSIYNSY 124
ST D R D +N K+HC DT + +S + + + ++I N
Sbjct: 61 LSTCDNR---LDPRNLKMHCIRFDTTKHLDVDFDLESEWTKSSSLCFDGEWTFMAIMNYC 120
Query: 125 NGLLFVERGVTTDR-EGIFNPMTNEFFQTPVCELHHTL-STGFGFSPTTQQYKLFRARDT 184
+GLL + + R +GIFNPMTNEF Q P +L + + GFGF+ TT+QYKLFR D+
Sbjct: 121 SGLLLICKCANYTRCDGIFNPMTNEFLQVPRGQLDNDIYYFGFGFTTTTKQYKLFRVCDS 180
Query: 185 ----CE------LKVLRFGR-----NNNQWSSVCLPFPLIVECHGVYMDGFIYWIGK--E 244
CE + VL F R N+NQW + PL + +G Y++GFIYWIGK E
Sbjct: 181 FSRNCEFESGSIMDVLTFSRSGTNANHNQWRYLHY-LPLDIHSNGAYLNGFIYWIGKEEE 240
Query: 245 KENERVIYALDVETERFEVIFVLEVGPHAHAFR---LQPLNGTIYAIIFMNKP--YQIEV 304
KENE IY LDVETE+ E+ VLE+ P + +Q N ++YAI +N+P I+V
Sbjct: 241 KENEYAIYVLDVETEKIELSIVLEICPPLCTSKVGGMQQFNDSVYAIFLINQPTGNSIQV 300
Query: 305 WRMQKKDSWIRDFILPGVFRD-KAIGLVKV-SDGKVFLRIINNLFCLDNYGTKVERNTLF 364
WRMQ+KD WIR+F++ + D + L+K DG++ + + FC
Sbjct: 301 WRMQEKDLWIREFVVDDIPNDWNVLTLIKAFEDGEILCMVNFDFFC-------------- 360
Query: 365 QIINNILEITNNFLRVMINEWCSLDTSWKRKIKTLIPFNRQFNGICVMESLHFGSLPSIL 386
W + T K K + ++ +C ++SL+FG LP+IL
Sbjct: 361 --------------------WYNPLTGRK---KIITKNEKKIRYVCQIQSLNFGYLPNIL 377
BLAST of Sed0020143 vs. NCBI nr
Match:
XP_011660339.1 (putative F-box protein At1g32420 [Cucumis sativus])
HSP 1 Score: 204.5 bits (519), Expect = 1.6e-48
Identity = 151/422 (35.78%), Postives = 206/422 (48.82%), Query Frame = 0
Query: 9 VINWGLPLKHHIALVIFSKLSIINLPTCRLVSKSWNHLVLKYASSSPKILPNAILFSTID 68
+ +W L I IFSKL + NLP CR+V K+WN L+L +ASS+ K L N + T D
Sbjct: 3 ITDWVSGLPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHASSASKFLTNDFILFTCD 62
Query: 69 YR---PFVYDFQNPKLHCFDIDTLSFVASCMLVEPDIESLS---------IYNSYNGLLF 128
P + NP +HC D L L E ++ S + NS NGLL
Sbjct: 63 VLHPFPCPDNHTNPNMHCLRFDNLDLDLDLDL-ELEVNKSSSFEAGVVYKLINSCNGLLL 122
Query: 129 VER------GVTTDREGIFNPMTNEFFQTP---VCELHHTLSTGFGFSPTTQQYKLFRA- 188
+ + G R GIFNPMTNEFFQ P + E H+ GFGF P T+QYKLFR
Sbjct: 123 IYKLPLCFPGEFLLRVGIFNPMTNEFFQVPHDEIVEYHY----GFGFIPATKQYKLFRVN 182
Query: 189 ----------RDTCELKVLRFGRN------NNQWSSVCLPFPLIVECHGVYMDGFIYWIG 248
L VL FGR+ +QW + P VE HG +++G IYW+G
Sbjct: 183 FPLNVRPEEPNSVSHLDVLTFGRSEIIDPKQSQWRRL-YSLPGGVENHGAHVNGVIYWLG 242
Query: 249 KEKE-NERVIYALDVETERFEVIFVLEVGPHAHAFRLQPLNGTIYAIIFMNKPYQIEVWR 308
+ KE NE V+Y LDVETE+ ++ VLEV + +Q NGT+YA+ M + Q VWR
Sbjct: 243 EGKEQNEYVVYTLDVETEKIQLSAVLEV-VNPMWMSIQQFNGTVYAVFHMEEATQ--VWR 302
Query: 309 MQKKDSWIRDFILPGVFRDKAIGLVKVSDGKVFLRIINNLFCLDNYGTKVERNTLFQIIN 368
MQ+K+SWIRDF++ D + LVK + L ++ + T+F
Sbjct: 303 MQEKNSWIRDFVID----DCNLTLVKAYENGEMLCMV--------------KPTVF---- 362
Query: 369 NILEITNNFLRVMINEWCSLDTSWKRKIKTLIPFNRQFNGICVMESLHFGSLPSILGSGG 392
W ++ +K+ +L + F GIC +E L+FGSL +IL G
Sbjct: 363 ----------------WLYNPSTGSKKVLSLRNEKKIFLGICHLE-LNFGSLLNIL--AG 374
BLAST of Sed0020143 vs. NCBI nr
Match:
XP_038879760.1 (uncharacterized protein LOC120071509 [Benincasa hispida])
HSP 1 Score: 204.1 bits (518), Expect = 2.2e-48
Identity = 122/309 (39.48%), Postives = 172/309 (55.66%), Query Frame = 0
Query: 9 VINWGLPLKHHIALVIFSKLSIINLPTCRLVSKSWNHLVLKYASSSPKILPNAILFSTID 68
++NWG L+ I IF +L + NL TCR+V K+WN L+L Y+SSS K+L N + T D
Sbjct: 3 IVNWGRELQEDIGESIFGRLVVSNLATCRVVCKTWNSLILDYSSSS-KLLTNDFILFTRD 62
Query: 69 YRPFV--YDFQNPKLHCFDIDTLSFVA---------SCMLVEPDIESLSIYNSYNGLLFV 128
P NPK+HCF +D L + + + + D + S NGLL +
Sbjct: 63 GNPICGSSSLYNPKMHCFRLDDLDVDSDMEFEVNKFASLRFDGDWSFILPIRSCNGLLLI 122
Query: 129 ERGV-TTDREGIFNPMTNEFFQTPVCELH-HTLSTGFGFSPTTQQYKLFRARDTCE---- 188
+ GIFNPMTNEFF+ P + GFGF PTT+ YKLFR E
Sbjct: 123 SKSTFYCSCMGIFNPMTNEFFRVPRDNFDANKYVYGFGFIPTTKHYKLFRITIEDEPSYS 182
Query: 189 --LKVLRFGR---------NNNQWSSVCLPFPLIVECHGVYMDGFIYWIGKEK--ENERV 248
++VL FGR + NQW + P + C G Y +G IYW+G+EK +NE V
Sbjct: 183 SRMEVLTFGRGGINPNPKQSQNQWRHL-YSIPSDICCKGAYFNGIIYWLGREKDEQNEYV 242
Query: 249 IYALDVETERFEVIFVLEVGPHAHAFR--LQPLNGTIYAIIFMNKP---YQIEVWRMQKK 283
IY LDVE+E+ ++ VL+VGP +H + +Q NG++YAI + P +I+VW+M++K
Sbjct: 243 IYTLDVESEKIKLSAVLKVGPFSHYNKVYIQQFNGSVYAIFHILPPTTNERIQVWKMEEK 302
BLAST of Sed0020143 vs. ExPASy TrEMBL
Match:
A0A1S3CB99 (F-box protein At3g07870-like OS=Cucumis melo OX=3656 GN=LOC103498749 PE=4 SV=1)
HSP 1 Score: 237.7 bits (605), Expect = 8.5e-59
Identity = 149/342 (43.57%), Postives = 201/342 (58.77%), Query Frame = 0
Query: 10 INWGLPLKHHIALVIFSKLSIINLPTCRLVSKSWNHLVLKYASSSPKILPNAILFSTI-- 69
+N L L HI IFSKLSI NLPTCR+V K+WN+LVL+YASS+ K LP LF ++
Sbjct: 12 MNINLRLPPHIVRAIFSKLSISNLPTCRVVCKTWNNLVLEYASST-KFLPTTTLFLSMAD 71
Query: 70 ---DYRPF-VYDFQNPKLHCFDIDTLSFVASCMLVEPDIESLSIYNSYNGLLFVERGVTT 129
+Y PF + NPK+HC DID+ + + E D ++I NS NGLL++ + T
Sbjct: 72 EISNYIPFKSTPWCNPKIHCVDIDSKTSYVASFGFEGDWSYITIVNSCNGLLYICK-FTF 131
Query: 130 DR--EGIFNPMTNEFFQTPVCELHHTL-STGFGFSPTTQQYKLFRAR-------DTCE-- 189
D EGI NPMTNEF + P E+ + S GFGFSP T+QYKLFR C
Sbjct: 132 DSLCEGILNPMTNEFMEIPQPEIELDVHSIGFGFSPRTKQYKLFRTEPEVLENLKKCHYI 191
Query: 190 LKVLRFGRNNNQWSSVCLPFPLIVECHGVYMDGFIYWIGK--EKENERVIYALDVETERF 249
+++ F QW P +V HG Y++G IYWIGK EKE E VIYALDV+TE+
Sbjct: 192 MEIFTFDNGYKQWRHF-ERLPFVVFHHGQYLNGVIYWIGKKLEKEGEAVIYALDVDTEQM 251
Query: 250 EVIFVLEVGPHAHAFRLQPLNGTIYAII-FMNK-----PYQIEVWRMQKKDSWIRDFILP 309
E LE+GP ++ +YAII M+K Y+IE+WRMQKKDSWI++F +
Sbjct: 252 ECTATLEIGPSLKNGSIKIFEERVYAIISLMDKRVSPTSYKIELWRMQKKDSWIKEFSID 311
Query: 310 GVFRDKAIGLVKV-SDGKVFLRIINNLFCLDNYGTKVERNTL 325
+++ GL+ V DG++ + I +N+F LD K++ TL
Sbjct: 312 ----EESFGLITVFEDGELLIAIKDNIFRLDKSRKKIKIKTL 346
BLAST of Sed0020143 vs. ExPASy TrEMBL
Match:
A0A0A0KSJ2 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G643290 PE=4 SV=1)
HSP 1 Score: 217.2 bits (552), Expect = 1.2e-52
Identity = 150/424 (35.38%), Postives = 227/424 (53.54%), Query Frame = 0
Query: 1 MEKQVESNVINWGLPLKHHIALVIFSKLSIINLPTCRLVSKSWNHLVLKYASSSPKILPN 60
MEK IN GL L ++ VI KL+I +LP CRLVS++WNHL+L YASSS K +PN
Sbjct: 1 MEKLECKRNINLGLQLPPNVVEVILPKLTISDLPACRLVSRTWNHLILNYASSS-KFIPN 60
Query: 61 AILFSTIDY------------RPFVYDFQ-NPKLHCFDID-TLSFVASCMLVEPDIE-SL 120
L ++ + RP F+ NPK++C DI+ T + +AS + D +
Sbjct: 61 LFLAASYEIHYSRNCNCNPHCRP---TFKCNPKMYCIDINRTNNLIASFVFDNNDWPYKI 120
Query: 121 SIYNSYNGLLFVER-GVTTDREGIFNPMTNEFF----QTPVCELHHTLSTGFGFSPTTQQ 180
I NS NGLL++ + G GI NPMTNEFF Q V + GFGF+ T+Q
Sbjct: 121 KILNSCNGLLYIHKVGDENFCNGILNPMTNEFFILSTQPKVKNEDISCFYGFGFNLKTKQ 180
Query: 181 YKLFRARDTCE-----LKVLRFGRN--NNQWSSV-CLPFPLIVECHGVYMDGFIYWIGKE 240
YKLF+A E ++V+RFG+N +W + CLPF + C GVY++G IYWIG++
Sbjct: 181 YKLFKAIHDEEDSHLMMEVMRFGKNEETKEWRHLTCLPF--VFYCDGVYLNGVIYWIGRQ 240
Query: 241 KENERVIYALDVETERFEVIFVLEVGP----HAHAFRLQPLNGTIYAIIFMNKP--YQIE 300
KEN+ VIY+L+VETE+ E I VL+V P + + + NG +YA I+++ +++
Sbjct: 241 KENKSVIYSLNVETEKIESITVLKVDPSYNTSDYGYYIGKYNGNLYATIWIHGTCCKKVQ 300
Query: 301 VWRMQKKDSWIRDFILPGV---FRDKAIGLVKV-SDGKVFLRIINNL-FCLDNYGTKVER 360
+W MQ KD W+++F++ + + D + LVK+ DG+ + + + L C D GT++++
Sbjct: 301 LWMMQGKDCWVKEFVVHDIEDRYVDAFLVLVKIFEDGERWFYVGSRLILCYDKTGTQIKK 360
Query: 361 NTLFQIINNILEITNNFLRVMINEWCSLDTSWKRKIKTLIPFNRQFNGICVMESLHFGSL 386
+ ++N +C +SL+FGSL
Sbjct: 361 KCRMKRVSN-------------------------------GRGNLVGQLCHFDSLNFGSL 387
BLAST of Sed0020143 vs. ExPASy TrEMBL
Match:
A0A0A0LWG1 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G257290 PE=4 SV=1)
HSP 1 Score: 214.2 bits (544), Expect = 1.0e-51
Identity = 153/380 (40.26%), Postives = 207/380 (54.47%), Query Frame = 0
Query: 1 MEKQVES-------NVINWGLPLKHHIALVIFSKLSIINLPTCRLVSKSWNHLVLKYASS 60
ME+Q+E+ IN G L IA IFSKL I +LP+CRLVS +WN LVL YASS
Sbjct: 4 MERQIENMEISERRMTINCGKGLPPLIAKTIFSKLVISDLPSCRLVSNTWNDLVLDYASS 63
Query: 61 SP-KILPNAILFSTIDYRPFVYDFQNPKLHCFDIDT--LSFVASCMLVEPDIESLSIY-- 120
+ + L NA L ST D R Y NPK+HC ++DT LS L I+S S+
Sbjct: 64 TQLQFLKNAFLLSTSD-RGLNYKLCNPKMHCINLDTRQLSNDFDFDLESEFIKSASLQFD 123
Query: 121 ----------NSYNGLLFVER-GVTTDREGIFNPMTNEFFQTPVCELHHTLST----GFG 180
S NGL+ + + T +GIFNPMTNEF Q H T GFG
Sbjct: 124 GDWTYTIIMAGSCNGLMLISKCSDYTWCQGIFNPMTNEFLQV---SEHGTFDDFYLYGFG 183
Query: 181 FSPTTQQYKLFRARD---TCE-----------LKVLRFGRN--------NNQWSSV-CLP 240
FSP T+QYKLFR D C ++VL FGR+ +NQW + LP
Sbjct: 184 FSPITKQYKLFRVFDKGFRCRRTSSTVDTHYTMEVLTFGRSGTNHSIPIHNQWRRLHTLP 243
Query: 241 FPLIVECHGVYMDGFIYWI----GKEKENERVIYALDVETERFEVIFVLEVGPHAHAFRL 300
F ++ + GVY++G IYW+ GK+KE + VIYALDVETE E+ VL+V + + ++
Sbjct: 244 FEIVAD--GVYLNGIIYWLVKEKGKDKEKKYVIYALDVETEHIEMTVVLQVPSNGYG-KI 303
Query: 301 QPLNGTIYAIIFMN---KPYQIEVWRMQKKDSWIRDFILPGVFRDKA-IGLVKVSDGKVF 322
NGTIYA +N I+VWRMQ+KDSW+R F++ + R+ + L+K+ + +
Sbjct: 304 HQFNGTIYATFHINWEKDSRTIQVWRMQEKDSWVRKFVICDISREWIHLQLIKMFEDEEI 363
BLAST of Sed0020143 vs. ExPASy TrEMBL
Match:
A0A0A0LPC6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G014420 PE=4 SV=1)
HSP 1 Score: 213.8 bits (543), Expect = 1.3e-51
Identity = 158/433 (36.49%), Postives = 217/433 (50.12%), Query Frame = 0
Query: 10 INWGLPLKHHIALVIFSKLSIINLPTCRLVSKSWNHLVLKYASSSP-KILPNAILFSTID 69
I+WG L IA IFSKL I NLP+CR V K+WNHLVL YASS+ + L NA L ST D
Sbjct: 36 IDWGKGLPPLIAKTIFSKLVISNLPSCRFVCKTWNHLVLHYASSTQLQFLTNAFLLSTSD 95
Query: 70 YRPFVYDFQNPKLHCFDIDTLSFVASCMLVEPDIE-------SLSIYNSY---------- 129
R Y+ NPK+HC ++D S V+ D+E SL Y +
Sbjct: 96 -RMLNYELCNPKMHCINLDNRQ---SSNDVDFDLEWEFIKSGSLQFYGDWTFMILLAHPC 155
Query: 130 NGLLFVER-GVTTDREGIFNPMTNEFFQTPVCELHHTL-STGFGFSPTTQQYKLFRARDT 189
NGL+F+ + T +GIFNPMTNEFFQ + GFG S ++QYKLFR +
Sbjct: 156 NGLMFISKCSDYTWCQGIFNPMTNEFFQVSEQDTFDDFYHYGFGLSAISKQYKLFRVSEA 215
Query: 190 C-------------------ELKVLRFGRN-------NNQWSSV-CLPFPLIVECHGVYM 249
++VL FGR+ +NQW + L LI HGVY+
Sbjct: 216 IPYSERFRLMITFGRDDTHYTMEVLTFGRSGTNHIPIHNQWRHLHNLSCDLI---HGVYL 275
Query: 250 DGFIYWIGKEK----ENERVIYALDVETERFEVIFVLEVGPHAHAFRLQPLNGTIYAIIF 309
+G IYW+GKEK + E VIYALDVETE+ E+ +L+V A ++ P NGTIYA+ +
Sbjct: 276 NGIIYWLGKEKGKKEKKEYVIYALDVETEQIEMSVILQV--QASDGKMHPFNGTIYALFY 335
Query: 310 MN---KPYQIEVWRMQKKDSWIRDFILPGVFRD-KAIGLVKV-SDGKVFLRIINNLFCLD 369
+N I+VW MQ+K SWIR F++ + ++ + L+K+ DG++ I ++ FC
Sbjct: 336 INWEKDSRTIQVWSMQEKCSWIRQFVIRDISKEWGCLELIKIFEDGEILFLIDSDFFCF- 395
Query: 370 NYGTKVERNTLFQIINNILEITNNFLRVMINEWCSLDTSWKRKIKTLIPFNRQFNG-ICV 386
Y E+ K +I N++ N +C
Sbjct: 396 -YHPLTEK------------------------------------KRIISKNQKKNRFVCQ 421
BLAST of Sed0020143 vs. ExPASy TrEMBL
Match:
A0A0A0LSE0 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G011590 PE=4 SV=1)
HSP 1 Score: 204.5 bits (519), Expect = 8.0e-49
Identity = 151/422 (35.78%), Postives = 206/422 (48.82%), Query Frame = 0
Query: 9 VINWGLPLKHHIALVIFSKLSIINLPTCRLVSKSWNHLVLKYASSSPKILPNAILFSTID 68
+ +W L I IFSKL + NLP CR+V K+WN L+L +ASS+ K L N + T D
Sbjct: 3 ITDWVSGLPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHASSASKFLTNDFILFTCD 62
Query: 69 YR---PFVYDFQNPKLHCFDIDTLSFVASCMLVEPDIESLS---------IYNSYNGLLF 128
P + NP +HC D L L E ++ S + NS NGLL
Sbjct: 63 VLHPFPCPDNHTNPNMHCLRFDNLDLDLDLDL-ELEVNKSSSFEAGVVYKLINSCNGLLL 122
Query: 129 VER------GVTTDREGIFNPMTNEFFQTP---VCELHHTLSTGFGFSPTTQQYKLFRA- 188
+ + G R GIFNPMTNEFFQ P + E H+ GFGF P T+QYKLFR
Sbjct: 123 IYKLPLCFPGEFLLRVGIFNPMTNEFFQVPHDEIVEYHY----GFGFIPATKQYKLFRVN 182
Query: 189 ----------RDTCELKVLRFGRN------NNQWSSVCLPFPLIVECHGVYMDGFIYWIG 248
L VL FGR+ +QW + P VE HG +++G IYW+G
Sbjct: 183 FPLNVRPEEPNSVSHLDVLTFGRSEIIDPKQSQWRRL-YSLPGGVENHGAHVNGVIYWLG 242
Query: 249 KEKE-NERVIYALDVETERFEVIFVLEVGPHAHAFRLQPLNGTIYAIIFMNKPYQIEVWR 308
+ KE NE V+Y LDVETE+ ++ VLEV + +Q NGT+YA+ M + Q VWR
Sbjct: 243 EGKEQNEYVVYTLDVETEKIQLSAVLEV-VNPMWMSIQQFNGTVYAVFHMEEATQ--VWR 302
Query: 309 MQKKDSWIRDFILPGVFRDKAIGLVKVSDGKVFLRIINNLFCLDNYGTKVERNTLFQIIN 368
MQ+K+SWIRDF++ D + LVK + L ++ + T+F
Sbjct: 303 MQEKNSWIRDFVID----DCNLTLVKAYENGEMLCMV--------------KPTVF---- 362
Query: 369 NILEITNNFLRVMINEWCSLDTSWKRKIKTLIPFNRQFNGICVMESLHFGSLPSILGSGG 392
W ++ +K+ +L + F GIC +E L+FGSL +IL G
Sbjct: 363 ----------------WLYNPSTGSKKVLSLRNEKKIFLGICHLE-LNFGSLLNIL--AG 374
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A1S3CB99 | 8.5e-59 | 43.57 | F-box protein At3g07870-like OS=Cucumis melo OX=3656 GN=LOC103498749 PE=4 SV=1 | [more] |
A0A0A0KSJ2 | 1.2e-52 | 35.38 | F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G643290 PE=4 ... | [more] |
A0A0A0LWG1 | 1.0e-51 | 40.26 | F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G257290 PE=4 ... | [more] |
A0A0A0LPC6 | 1.3e-51 | 36.49 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G014420 PE=4 SV=1 | [more] |
A0A0A0LSE0 | 8.0e-49 | 35.78 | F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G011590 PE=4 ... | [more] |
Match Name | E-value | Identity | Description | |