Sed0020135 (gene) Chayote v1

Overview


Name	Sed0020135
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Pentatricopeptide repeat-containing protein
Location	LG10: 36384068 .. 36388533 (+)
RNA-Seq Expression	Sed0020135
Synteny	Sed0020135

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCGTGTTCGTGTTTCCTAGCTGCTTACTAGTCTGCGCCTATCTTCAAGCTCGGCAGGATTTTTGGTTTCTTCCATTAAAAGGTCTGAGTGTGCTTCTTCTTCTTCTTCTGTTCTTTGTTCAGTGAAGAAAAGTTTATGCTCATGAAATGTTCGATGAAATGTCTCTGAACCCAAATTCCAAATGGTTTACGCCAAATCTTGTGCAGTGCGCTCTATATGCACCAATTCCGAGTCCACCAGCCTCTCCAATCTCCTCCAGGGCCGCATTTCCAGTTCCCATCTCCATCAAATCCACGCCCGAATCATTCGCCTTCAAAAGCATCAAGACAATCTCATCGCAACTCGGCTGATCGGCCACTACCCACATTCTGTGGGACTCAAAATCTTCAATCAGCTTCGAAACCCCAACATATTTCCTTGCAACGCCATTATCAGAGTGCTTGCTGATGGTAACTCTTCGTTTCATGCTTTTTCCATCTTCAAATCTTTGAAGCGGTTTTCACTTTTTCCGAATGATTTCACTTTTTCTTTCCTTCTCAAGGCGTTTTACCGTTCTTGTTGTGCTTTAAATGTGAAACAAGTTCATACCCACGTCCTGAAAATGGGGTATTTGGGCGATTCTTTTATCTCCAATGCTTTTATTGGTGTCTATGCGAAGTGCTTGAGGGATGTGGATTCGGCGCGTAAGGTGTTCGATGAAATGACTGAGAGAGAGATGGCTTGTTGTTGGACTTCTTTGATTGCTGGGTATGCTCAGATGGGTCTTGCTGAAAAGGCTCTGTTGCTTTTTGTGATGATGATCGAAGAGAATGTGCAGCCGGAGGATGACACCATGATTAGTGTTTTGTCTTCTTGTTCTAAGTTTCAAGTTGCTGAAATTGAGAAATGGGTTGTAGATTTAGGACAATTGGTTAATGAATTTGGTTCGAAGAGCTCTGGTCGTGATTCGATTAATATTGTTCTTATTTATCTATATGGGAAGTTTGGGAGGATTGAGAAGAGTAAAGAAAAGTTTGATGAGATTGTTGATAAGAGAAGTGTGCTTGTTTGGAATTCAATGATAAATGCTTACTTTCAGAACGGTTGCCCTGTGGAAGCCTTGACTCTTTTTCGTTTGATGGTTGAAAATTCTCATTGCAAACCCAACCATGTCACAATGGTTACTGTCCTTTCAGCTTGTGCTCAAATCGGAGATTTGCAGCTCGGATGTTGGGTTCATGAAGTTCTTGAACATGGAGGGCGTAGAGGTATCATTGCATCAAACAAAATGTTAGCCACTGCGTTGATTGATATGTATTGTAAAAGTGGGAGCCTCGAGAAGGCAAAAGAAGTTTTTCATCAACTAACCTGCAAAGATGTAATCTCCTTCAATGCCATGATCATGGGCCTTGCAGTCAATGGCGAAGGCGTCGAGGCATTGAAGCTTTTTGCCCAAATGCAAGAGTTTGATATAAGACCGACCCCTGGAACATTTGTAGGCTTATTATGTGCTTGTAGCCATTCGGGATTTCTAGAACAAGGGCGTCAAATTTTCATTGAAATGACTTCCCGCTATTTAATATTCCCTTGTCTAGAACACTATGCTTGCTACATTGATCTCCTTGCTCGAGCAGGCCTCTTCGAAGATGCCCTTGAAGTTGTTTCAACCATGCCTTTTGAACCTAATAATTTTGTTTGGAGTTCTCTACTGAGAGGTTGCCTTCTCCATTCAAGATTTGAGTTGGCACAATATGTTTCCAAAAAGCTTGTTGAAGTGGATCCTGAAAACTCTGCAGGCTATGTAATGCAAGCTAATTCATTTGCTACCGATCTTCAATGGGAAGATGTCTTGACTCTTAGATCGTTTATGAGAGAAAAGGGTGTCCATAAGCAGCCAGGCCAGAGTTGGATTGGTATAGATGGAGTTGTACACGAATTTTTTTCGACAAGCCGATCACATCCTTATGTCAATGTTTTGTACAATACGTTGAATGAGCTAGAAAAGCAAATGAAGTTAGTAATCCCATAGAAAAAACCTCCAAGGTGTAGAAGGCATTGATCTAGCAATCTTTTCAACCGTAGTTCTTAGTTTCTATGTGTTTTTGAATTACATTATACGATTGTCTAAAAATTCAGATGTTTAAATTCTCACGCCTCGTGCTTGAACTAAAAAAATGAAAATATACATTTACATTAATGTCACAATATACATATGCCTGTGAAGGATTAACTATGCTGGTACTCGTAAGTCGTAGCAAGGGTATAGGTAAAGTTTCCTTGGTTGGCATTTACTTAAGAAGGGTATATAGGTGAAGTTCAAGTTCAACAAGCATATTCTTCATTTACTTAAAAAGGTATGTGCTCTTGTAAGTTTTGTGTCTACTGAATTTAACTACCAAACCCCAAGTGTGTTTATTACAATAATAAGAATTTGTTAGATGATGTTTGTAGGCAAATTTATTGATCATATTATCCATGAAGTATGGCCATGGCTGAAAACTTATTTGGCTATTTGCAACTGGTACAACAATTATGCTATTAAAACGAGTGAAGCCTGTTTGGCTATTAAAACTATACTTGGAACTTTCCATGTTCCATTTCTAATATACTTTCATAAATTGTGCTAATTGTTGAAGGAGCTCCATGAGGTGAAGAGGAAAAGTACAGATCTTCAGATGCAATAGCTTGTTGGTGAGGAGAAAAATGATCTGTTGGACTATCCGGGATCTTTACGACTAGAAAAGGTGTGTTGATTTTTCCAATACTATCAAACTTATGGTAGTACCATGCTATTAGTATTAAGCTATAACCATCTCATGTTTATTGAAAATTTTGCATTAGGTTATTCATATGAAGTTCGATGTTTCTTTTTGTTAATTTTATTTTATATAGGGACGTGGAAGAAAATATTTGCTTACCCTGTATATTCTTACAACACTCTACAAGACAAGTCATAATGGGTTGGCCTAGTATAAGCCATTGTAGCCCCCCACCTAGGATTTAATAGCTTATTCATTTCTTTGGCAACCAAATATAGTAGTATTATAAAGATGTTTGTAAGAATAGTTGAGGTATATAGAACTAGAAGAAAACTTGGATAGTCACAGATATTTAAAAATAAAATGAAAAAACTGGCTGCAAGGTAATGGATGACATGGGGACAGGCGTGGTTACCTTGACCATGAAAAAACCTATAAATGTAGGCTTTTTCTTAAAATTTCCACTAGGTAACTAATTAGCCTATCTGCCAACAAGAGCAGAGCTCTACCGGTATTTTGTACAACCTAATAACCATGAGATTATAGGTTCGAATCCCCCTTTCCCAATATTGTTTTATCAAAAAAAAAAAAAAAAAAAACTAATTAGCCTATTTCCTGAACTTGTTCTGAGGGGTGTATGCGCCAGCCTCCTTGACCATGTTCTGAAACTCGACAAAGCATTGTACGATTTGAAACAGAGTCCTCATGCTTGGTTCCCAAAGCTGAGTTCTTGTTTGGTGTGCTAATTTAAAGCGTCAAAGGCTTATACCATGTTTGTTTATAGAGAGGCCAAGTAACAACATTCTTTACATCTTACTACAGCTTTTAATACTCATTTCTCTCTAAAGTATTTGGGCAACATTTCACACACTTTCTCAGGGATCAATTGGTTTAGCAGGTTATATTATGCTAATTTCTTCACTCTTCTGCAAACTCTAATATGCAGGCTGCTAAGCATCTTCTTCTGTATATCAAGAGAGTATGGCATTTCCTATGCCAAGCCTACATTATTTTTTAGTACTAGTGGGTTTTGCACCTTCCTTGGATCTAACCTTATTTCTTGGAGTTACTCCATACATACAGAAAGTTCTCTCTCAATCAGCAGAATCTGAATTTGGTGGCATGGCAAATGGTATTATTGGGTTCAATCTATGCTATTCTCCATGAACTTGGTTTATTGAGAACTAACCCACCTCTATTTTTTGTGACAATATCAGTTCCACATATTTGGCAGTCAAGTCGATGATGCACAACCGAACCAAATTTATCGAGGTTAATCGCCATTTTTTTGTGTATGACTCGTAAGCAATTACTTTTCAAATCTGTCTCTGTTGTTACCATAACAAAAGCTTTGGCTCCACATCGTTTTGTCGGAGTATGAACCAAGCTCACATACGTTCAAAACCTCGTTCGCTTGCAGAGGATGCAAGTGTTGAGATATGCCTTGAATGCGCCAATGCCTTGCGCTTAGCGCAACCAGCTTTCACACTCCGCAGCGCTAGCACTTTTGCATTATGTTGTGCGTTTCGCGCTTGCGCACATCTGCATTCTGTTTAATGCTTACACATTTTGTAATAAAGTTTAATAAGAGTGCATATATAAACTCCAATTAAACCCTAGCCGTAATATGACGTGAACTTTGTAATTCACCCCTCCTTGATAAAAATTGTTCTCCCTTTTTATCCGTGAACTAGCTAACACTATATTAGTGAACTATGTAAAACCAT

mRNA sequence

TCCGTGTTCGTGTTTCCTAGCTGCTTACTAGTCTGCGCCTATCTTCAAGCTCGGCAGGATTTTTGGTTTCTTCCATTAAAAGGTCTGAGTGTGCTTCTTCTTCTTCTTCTGTTCTTTGTTCAGTGAAGAAAAGTTTATGCTCATGAAATGTTCGATGAAATGTCTCTGAACCCAAATTCCAAATGGTTTACGCCAAATCTTGTGCAGTGCGCTCTATATGCACCAATTCCGAGTCCACCAGCCTCTCCAATCTCCTCCAGGGCCGCATTTCCAGTTCCCATCTCCATCAAATCCACGCCCGAATCATTCGCCTTCAAAAGCATCAAGACAATCTCATCGCAACTCGGCTGATCGGCCACTACCCACATTCTGTGGGACTCAAAATCTTCAATCAGCTTCGAAACCCCAACATATTTCCTTGCAACGCCATTATCAGAGTGCTTGCTGATGGTAACTCTTCGTTTCATGCTTTTTCCATCTTCAAATCTTTGAAGCGGTTTTCACTTTTTCCGAATGATTTCACTTTTTCTTTCCTTCTCAAGGCGTTTTACCGTTCTTGTTGTGCTTTAAATGTGAAACAAGTTCATACCCACGTCCTGAAAATGGGGTATTTGGGCGATTCTTTTATCTCCAATGCTTTTATTGGTGTCTATGCGAAGTGCTTGAGGGATGTGGATTCGGCGCGTAAGGTGTTCGATGAAATGACTGAGAGAGAGATGGCTTGTTGTTGGACTTCTTTGATTGCTGGGTATGCTCAGATGGGTCTTGCTGAAAAGGCTCTGTTGCTTTTTGTGATGATGATCGAAGAGAATGTGCAGCCGGAGGATGACACCATGATTAGTGTTTTGTCTTCTTGTTCTAAGTTTCAAGTTGCTGAAATTGAGAAATGGGTTGTAGATTTAGGACAATTGGTTAATGAATTTGGTTCGAAGAGCTCTGGTCGTGATTCGATTAATATTGTTCTTATTTATCTATATGGGAAGTTTGGGAGGATTGAGAAGAGTAAAGAAAAGTTTGATGAGATTGTTGATAAGAGAAGTGTGCTTGTTTGGAATTCAATGATAAATGCTTACTTTCAGAACGGTTGCCCTGTGGAAGCCTTGACTCTTTTTCGTTTGATGGTTGAAAATTCTCATTGCAAACCCAACCATGTCACAATGGTTACTGTCCTTTCAGCTTGTGCTCAAATCGGAGATTTGCAGCTCGGATGTTGGGTTCATGAAGTTCTTGAACATGGAGGGCGTAGAGGTATCATTGCATCAAACAAAATGTTAGCCACTGCGTTGATTGATATGTATTGTAAAAGTGGGAGCCTCGAGAAGGCAAAAGAAGTTTTTCATCAACTAACCTGCAAAGATGTAATCTCCTTCAATGCCATGATCATGGGCCTTGCAGTCAATGGCGAAGGCGTCGAGGCATTGAAGCTTTTTGCCCAAATGCAAGAGTTTGATATAAGACCGACCCCTGGAACATTTGTAGGCTTATTATGTGCTTGTAGCCATTCGGGATTTCTAGAACAAGGGCGTCAAATTTTCATTGAAATGACTTCCCGCTATTTAATATTCCCTTGTCTAGAACACTATGCTTGCTACATTGATCTCCTTGCTCGAGCAGGCCTCTTCGAAGATGCCCTTGAAGTTGTTTCAACCATGCCTTTTGAACCTAATAATTTTGTTTGGAGTTCTCTACTGAGAGGTTGCCTTCTCCATTCAAGATTTGAGTTGGCACAATATGTTTCCAAAAAGCTTGTTGAAGTGGATCCTGAAAACTCTGCAGGCTATGTAATGCAAGCTAATTCATTTGCTACCGATCTTCAATGGGAAGATGTCTTGACTCTTAGATCGTTTATGAGAGAAAAGGGTGTCCATAAGCAGCCAGGCCAGAGTTGGATTGGTATAGATGGAGTTGTACACGAATTTTTTTCGACAAGCCGATCACATCCTTATGTCAATGTTTTGTACAATACGTTGAATGAGCTAGAAAAGCAAATGAAGTTAGTAATCCCATAGAAAAAACCTCCAAGGTGTAGAAGGCATTGATCTAGCAATCTTTTCAACCGTAGTTCTTAGTTTCTATGTGTTTTTGAATTACATTATACGATTGTCTAAAAATTCAGATGTTTAAATTCTCACGCCTCGTGCTTGAACTAAAAAAATGAAAATATACATTTACATTAATGTCACAATATACATATGCCTGTGAAGGATTAACTATGCTGGTACTCGTAAGTCGTAGCAAGGGTATAGGTAAAGTTTCCTTGGTTGGCATTTACTTAAGAAGGGTATATAGGTGAAGTTCAAGTTCAACAAGCATATTCTTCATTTACTTAAAAAGGTATGTGCTCTTGTAAGTTTTGTGTCTACTGAATTTAACTACCAAACCCCAAGTGTGTTTATTACAATAATAAGAATTTGTTAGATGATGTTTGTAGGCAAATTTATTGATCATATTATCCATGAAGTATGGCCATGGCTGAAAACTTATTTGGCTATTTGCAACTGGAGCTCCATGAGGTGAAGAGGAAAAGTACAGATCTTCAGATGCAATAGCTTGTTGGTGAGGAGAAAAATGATCTGTTGGACTATCCGGGATCTTTACGACTAGAAAAGGCTGCTAAGCATCTTCTTCTGTATATCAAGAGAGTATGGCATTTCCTATGCCAAGCCTACATTATTTTTTAGTACTAGTGGGTTTTGCACCTTCCTTGGATCTAACCTTATTTCTTGGAGTTACTCCATACATACAGAAAGTTCTCTCTCAATCAGCAGAATCTGAATTTGGTGGCATGGCAAATGTTCCACATATTTGGCAGTCAAGTCGATGATGCACAACCGAACCAAATTTATCGAGGTTAATCGCCATTTTTTTGTGTATGACTCGTAAGCAATTACTTTTCAAATCTGTCTCTGTTGTTACCATAACAAAAGCTTTGGCTCCACATCGTTTTGTCGGAGTATGAACCAAGCTCACATACGTTCAAAACCTCGTTCGCTTGCAGAGGATGCAAGTGTTGAGATATGCCTTGAATGCGCCAATGCCTTGCGCTTAGCGCAACCAGCTTTCACACTCCGCAGCGCTAGCACTTTTGCATTATGTTGTGCGTTTCGCGCTTGCGCACATCTGCATTCTGTTTAATGCTTACACATTTTGTAATAAAGTTTAATAAGAGTGCATATATAAACTCCAATTAAACCCTAGCCGTAATATGACGTGAACTTTGTAATTCACCCCTCCTTGATAAAAATTGTTCTCCCTTTTTATCCGTGAACTAGCTAACACTATATTAGTGAACTATGTAAAACCAT

Coding sequence (CDS)

ATGGTTTACGCCAAATCTTGTGCAGTGCGCTCTATATGCACCAATTCCGAGTCCACCAGCCTCTCCAATCTCCTCCAGGGCCGCATTTCCAGTTCCCATCTCCATCAAATCCACGCCCGAATCATTCGCCTTCAAAAGCATCAAGACAATCTCATCGCAACTCGGCTGATCGGCCACTACCCACATTCTGTGGGACTCAAAATCTTCAATCAGCTTCGAAACCCCAACATATTTCCTTGCAACGCCATTATCAGAGTGCTTGCTGATGGTAACTCTTCGTTTCATGCTTTTTCCATCTTCAAATCTTTGAAGCGGTTTTCACTTTTTCCGAATGATTTCACTTTTTCTTTCCTTCTCAAGGCGTTTTACCGTTCTTGTTGTGCTTTAAATGTGAAACAAGTTCATACCCACGTCCTGAAAATGGGGTATTTGGGCGATTCTTTTATCTCCAATGCTTTTATTGGTGTCTATGCGAAGTGCTTGAGGGATGTGGATTCGGCGCGTAAGGTGTTCGATGAAATGACTGAGAGAGAGATGGCTTGTTGTTGGACTTCTTTGATTGCTGGGTATGCTCAGATGGGTCTTGCTGAAAAGGCTCTGTTGCTTTTTGTGATGATGATCGAAGAGAATGTGCAGCCGGAGGATGACACCATGATTAGTGTTTTGTCTTCTTGTTCTAAGTTTCAAGTTGCTGAAATTGAGAAATGGGTTGTAGATTTAGGACAATTGGTTAATGAATTTGGTTCGAAGAGCTCTGGTCGTGATTCGATTAATATTGTTCTTATTTATCTATATGGGAAGTTTGGGAGGATTGAGAAGAGTAAAGAAAAGTTTGATGAGATTGTTGATAAGAGAAGTGTGCTTGTTTGGAATTCAATGATAAATGCTTACTTTCAGAACGGTTGCCCTGTGGAAGCCTTGACTCTTTTTCGTTTGATGGTTGAAAATTCTCATTGCAAACCCAACCATGTCACAATGGTTACTGTCCTTTCAGCTTGTGCTCAAATCGGAGATTTGCAGCTCGGATGTTGGGTTCATGAAGTTCTTGAACATGGAGGGCGTAGAGGTATCATTGCATCAAACAAAATGTTAGCCACTGCGTTGATTGATATGTATTGTAAAAGTGGGAGCCTCGAGAAGGCAAAAGAAGTTTTTCATCAACTAACCTGCAAAGATGTAATCTCCTTCAATGCCATGATCATGGGCCTTGCAGTCAATGGCGAAGGCGTCGAGGCATTGAAGCTTTTTGCCCAAATGCAAGAGTTTGATATAAGACCGACCCCTGGAACATTTGTAGGCTTATTATGTGCTTGTAGCCATTCGGGATTTCTAGAACAAGGGCGTCAAATTTTCATTGAAATGACTTCCCGCTATTTAATATTCCCTTGTCTAGAACACTATGCTTGCTACATTGATCTCCTTGCTCGAGCAGGCCTCTTCGAAGATGCCCTTGAAGTTGTTTCAACCATGCCTTTTGAACCTAATAATTTTGTTTGGAGTTCTCTACTGAGAGGTTGCCTTCTCCATTCAAGATTTGAGTTGGCACAATATGTTTCCAAAAAGCTTGTTGAAGTGGATCCTGAAAACTCTGCAGGCTATGTAATGCAAGCTAATTCATTTGCTACCGATCTTCAATGGGAAGATGTCTTGACTCTTAGATCGTTTATGAGAGAAAAGGGTGTCCATAAGCAGCCAGGCCAGAGTTGGATTGGTATAGATGGAGTTGTACACGAATTTTTTTCGACAAGCCGATCACATCCTTATGTCAATGTTTTGTACAATACGTTGAATGAGCTAGAAAAGCAAATGAAGTTAGTAATCCCATAG

Protein sequence

MVYAKSCAVRSICTNSESTSLSNLLQGRISSSHLHQIHARIIRLQKHQDNLIATRLIGHYPHSVGLKIFNQLRNPNIFPCNAIIRVLADGNSSFHAFSIFKSLKRFSLFPNDFTFSFLLKAFYRSCCALNVKQVHTHVLKMGYLGDSFISNAFIGVYAKCLRDVDSARKVFDEMTEREMACCWTSLIAGYAQMGLAEKALLLFVMMIEENVQPEDDTMISVLSSCSKFQVAEIEKWVVDLGQLVNEFGSKSSGRDSINIVLIYLYGKFGRIEKSKEKFDEIVDKRSVLVWNSMINAYFQNGCPVEALTLFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLEHGGRRGIIASNKMLATALIDMYCKSGSLEKAKEVFHQLTCKDVISFNAMIMGLAVNGEGVEALKLFAQMQEFDIRPTPGTFVGLLCACSHSGFLEQGRQIFIEMTSRYLIFPCLEHYACYIDLLARAGLFEDALEVVSTMPFEPNNFVWSSLLRGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSFATDLQWEDVLTLRSFMREKGVHKQPGQSWIGIDGVVHEFFSTSRSHPYVNVLYNTLNELEKQMKLVIP

Homology

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BLAST of Sed0020135 vs. NCBI nr
Match: XP_038888799.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 1027.3 bits (2655), Expect = 5.3e-296
Identity = 512/608 (84.21%), Postives = 552/608 (90.79%), Query Frame = 0


Query: 1   MVYAKSCAVRSICTNSESTSLSNLLQGRISSSHLHQIHARIIRLQKHQDNLIATRLIGHY 60
           MV  KS A+R++C N +S +LS+LLQGRIS+SHL QIHAR+ RL KHQDNLIATRLIGHY
Sbjct: 19  MVNGKSYAMRALCINPDSINLSDLLQGRISNSHLRQIHARVFRLLKHQDNLIATRLIGHY 78

Query: 61  PHSVGLKIFNQLRNPNIFPCNAIIRVLADGNSSFHAFSIFKSLKRFSLFPNDFTFSFLLK 120
           PHSVGL +FNQL  PNIFPCNAIIRVLA+ NSSF AFSIFKSLK  SL PNDFTFSFLLK
Sbjct: 79  PHSVGLSVFNQLIRPNIFPCNAIIRVLAEHNSSFLAFSIFKSLKHLSLSPNDFTFSFLLK 138

Query: 121 AFYRSCCALNVKQVHTHVLKMGYLGDSFISNAFIGVYAKCLRDVDSARKVFDEMTEREMA 180
           AF+RS  ALNVKQVHTHVLKMGYLGDSFISNA +GVYA+ L+D+ SA K+FDEM+ RE+A
Sbjct: 139 AFHRSSHALNVKQVHTHVLKMGYLGDSFISNALLGVYARGLKDMASAHKLFDEMSGREIA 198

Query: 181 CCWTSLIAGYAQMGLAEKALLLFVMMIEENVQPEDDTMISVLSSCSKFQVAEIEKWVVDL 240
            CWTSLIAGYAQMGLAE ALL FVMMIEEN+QPEDDTM+SVLS+CSKF +AEIEKWVV+L
Sbjct: 199 -CWTSLIAGYAQMGLAENALLHFVMMIEENMQPEDDTMVSVLSACSKFHIAEIEKWVVEL 258

Query: 241 GQLVNEFGSKSSGRDSINIVLIYLYGKFGRIEKSKEKFDEIVDKRSVLVWNSMINAYFQN 300
            QLVN+F  KSS  DSINIVLIYLYGK+G+IEKS+EKF+EIVDKRSVLVWNSMINAYFQN
Sbjct: 259 RQLVNKFDPKSSCCDSINIVLIYLYGKWGKIEKSEEKFNEIVDKRSVLVWNSMINAYFQN 318

Query: 301 GCPVEALTLFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLEHGGRRGIIAS 360
           GCPVE LTLFRLMVENSHCKPNHVTMVTVLSACA IGDLQLGCWVH+ LEHGGRRG+IAS
Sbjct: 319 GCPVETLTLFRLMVENSHCKPNHVTMVTVLSACALIGDLQLGCWVHDFLEHGGRRGVIAS 378

Query: 361 NKMLATALIDMYCKSGSLEKAKEVFHQLTCKDVISFNAMIMGLAVNGEGVEALKLFAQMQ 420
           NKMLATALIDMYCKSGSLE+AKEVFHQL  KDVISFNAMIMGLAVNG+G EALKLFAQMQ
Sbjct: 379 NKMLATALIDMYCKSGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQ 438

Query: 421 EFDIRPTPGTFVGLLCACSHSGFLEQGRQIFIEMTSRYLIFPCLEHYACYIDLLARAGLF 480
           E DIRPT GTFV LL ACSHSGFLEQGRQIFIEMT+RY I P LEHYACYIDLLARAG F
Sbjct: 439 EVDIRPTTGTFVSLLSACSHSGFLEQGRQIFIEMTTRYFILPTLEHYACYIDLLARAGHF 498

Query: 481 EDALEVVSTMPFEPNNFVWSSLLRGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSF 540
           EDALEVVSTMPFEPNN VWSSLL GCLLHS+FELAQYVSKKLVEVDPENSAGYVMQANSF
Sbjct: 499 EDALEVVSTMPFEPNNCVWSSLLGGCLLHSKFELAQYVSKKLVEVDPENSAGYVMQANSF 558

Query: 541 ATDLQWEDVLTLRSFMREKGVHKQPGQSWIGIDGVVHEFFSTSRSHPYVNVLYNTLNELE 600
           ATDLQW+DV  LR FMREKGVHKQPGQSWI IDG+VHEFFS  +SHP V++LYNTLNELE
Sbjct: 559 ATDLQWDDVSALRWFMREKGVHKQPGQSWISIDGIVHEFFSAMKSHPSVDLLYNTLNELE 618

Query: 601 KQMKLVIP 609
           KQMKLV+P
Sbjct: 619 KQMKLVLP 625

[Close]

BLAST of Sed0020135 vs. NCBI nr
Match: TYK06804.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1011.9 bits (2615), Expect = 2.3e-291
Identity = 498/608 (81.91%), Postives = 550/608 (90.46%), Query Frame = 0


Query: 1   MVYAKSCAVRSICTNSESTSLSNLLQGRISSSHLHQIHARIIRLQKHQDNLIATRLIGHY 60
           M+  KS A+R +  N E  +LS+LLQGRI++SHL QIHAR+ RL KHQDNLIATRLIGHY
Sbjct: 28  MINIKSYAMRCLFVNPEFINLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHY 87

Query: 61  PHSVGLKIFNQLRNPNIFPCNAIIRVLADGNSSFHAFSIFKSLKRFSLFPNDFTFSFLLK 120
           PHSVGL++FNQL  PNIFPCNAIIRVLA+ N+SF A SIFKSLK  SL PNDFTFSFLLK
Sbjct: 88  PHSVGLRVFNQLIRPNIFPCNAIIRVLAEHNTSFLALSIFKSLKHLSLSPNDFTFSFLLK 147

Query: 121 AFYRSCCALNVKQVHTHVLKMGYLGDSFISNAFIGVYAKCLRDVDSARKVFDEMTEREMA 180
           AF+RSC AL+VKQVHTHVLKMGY GDSFISNA +GVYA+ L+D+ SA KVFDEM++REMA
Sbjct: 148 AFHRSCNALDVKQVHTHVLKMGYFGDSFISNALLGVYARGLKDMASAHKVFDEMSDREMA 207

Query: 181 CCWTSLIAGYAQMGLAEKALLLFVMMIEENVQPEDDTMISVLSSCSKFQVAEIEKWVVDL 240
           CCWTSLIAGYAQMGLAEKA+L+FV MI+EN+QPEDDTM+SVLS+CSKFQ+AEIEKWVV L
Sbjct: 208 CCWTSLIAGYAQMGLAEKAMLIFVTMIKENMQPEDDTMVSVLSACSKFQIAEIEKWVVAL 267

Query: 241 GQLVNEFGSKSSGRDSINIVLIYLYGKFGRIEKSKEKFDEIVDKRSVLVWNSMINAYFQN 300
            +LVN+F SKSS  DSINIVLIYLYGK+G +EKS+EKF+EI+DK+SVLVWNSMINAYFQN
Sbjct: 268 RELVNKFDSKSSCCDSINIVLIYLYGKWGMVEKSEEKFNEIIDKKSVLVWNSMINAYFQN 327

Query: 301 GCPVEALTLFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLEHGGRRGIIAS 360
           G PVEALTLFRLMVEN HCKPNHVTMVTV+SACAQIGDLQLG WVHEVL+  GR+GIIAS
Sbjct: 328 GFPVEALTLFRLMVENPHCKPNHVTMVTVISACAQIGDLQLGSWVHEVLQRSGRKGIIAS 387

Query: 361 NKMLATALIDMYCKSGSLEKAKEVFHQLTCKDVISFNAMIMGLAVNGEGVEALKLFAQMQ 420
           NKMLATALIDMYCK GSLE+AKEVFHQL  KDVISFNAMIMGLAVNG+G EALKLFAQMQ
Sbjct: 388 NKMLATALIDMYCKCGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQ 447

Query: 421 EFDIRPTPGTFVGLLCACSHSGFLEQGRQIFIEMTSRYLIFPCLEHYACYIDLLARAGLF 480
           E DIRP+ GTF+GLL ACSHSGFLEQG QIFIEMT++YLI P LEHYACYIDLLARAG F
Sbjct: 448 EIDIRPSTGTFIGLLSACSHSGFLEQGHQIFIEMTTQYLISPSLEHYACYIDLLARAGRF 507

Query: 481 EDALEVVSTMPFEPNNFVWSSLLRGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSF 540
           EDALEVVSTMPFEPNNFVWSSLLRGCLLHS FELAQYVSKKLVEVDPENSAGYVMQANSF
Sbjct: 508 EDALEVVSTMPFEPNNFVWSSLLRGCLLHSSFELAQYVSKKLVEVDPENSAGYVMQANSF 567

Query: 541 ATDLQWEDVLTLRSFMREKGVHKQPGQSWIGIDGVVHEFFSTSRSHPYVNVLYNTLNELE 600
           A+D QW+DV  LR FMREKGVHKQPGQSWI IDG VHEFFS ++SHPYV++LY+TLNEL+
Sbjct: 568 ASDRQWDDVSALRWFMREKGVHKQPGQSWISIDGTVHEFFSATKSHPYVDLLYSTLNELD 627

Query: 601 KQMKLVIP 609
           KQ KLVIP
Sbjct: 628 KQTKLVIP 635

[Close]

BLAST of Sed0020135 vs. NCBI nr
Match: XP_008455016.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X1 [Cucumis melo])

HSP 1 Score: 1011.9 bits (2615), Expect = 2.3e-291
Identity = 498/608 (81.91%), Postives = 550/608 (90.46%), Query Frame = 0


Query: 1   MVYAKSCAVRSICTNSESTSLSNLLQGRISSSHLHQIHARIIRLQKHQDNLIATRLIGHY 60
           M+  KS A+R +  N E  +LS+LLQGRI++SHL QIHAR+ RL KHQDNLIATRLIGHY
Sbjct: 1   MINIKSYAMRCLFVNPEFINLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHY 60

Query: 61  PHSVGLKIFNQLRNPNIFPCNAIIRVLADGNSSFHAFSIFKSLKRFSLFPNDFTFSFLLK 120
           PHSVGL++FNQL  PNIFPCNAIIRVLA+ N+SF A SIFKSLK  SL PNDFTFSFLLK
Sbjct: 61  PHSVGLRVFNQLIRPNIFPCNAIIRVLAEHNTSFLALSIFKSLKHLSLSPNDFTFSFLLK 120

Query: 121 AFYRSCCALNVKQVHTHVLKMGYLGDSFISNAFIGVYAKCLRDVDSARKVFDEMTEREMA 180
           AF+RSC AL+VKQVHTHVLKMGY GDSFISNA +GVYA+ L+D+ SA KVFDEM++REMA
Sbjct: 121 AFHRSCNALDVKQVHTHVLKMGYFGDSFISNALLGVYARGLKDMASAHKVFDEMSDREMA 180

Query: 181 CCWTSLIAGYAQMGLAEKALLLFVMMIEENVQPEDDTMISVLSSCSKFQVAEIEKWVVDL 240
           CCWTSLIAGYAQMGLAEKA+L+FV MI+EN+QPEDDTM+SVLS+CSKFQ+AEIEKWVV L
Sbjct: 181 CCWTSLIAGYAQMGLAEKAMLIFVTMIKENMQPEDDTMVSVLSACSKFQIAEIEKWVVAL 240

Query: 241 GQLVNEFGSKSSGRDSINIVLIYLYGKFGRIEKSKEKFDEIVDKRSVLVWNSMINAYFQN 300
            +LVN+F SKSS  DSINIVLIYLYGK+G +EKS+EKF+EI+DK+SVLVWNSMINAYFQN
Sbjct: 241 RELVNKFDSKSSCCDSINIVLIYLYGKWGMVEKSEEKFNEIIDKKSVLVWNSMINAYFQN 300

Query: 301 GCPVEALTLFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLEHGGRRGIIAS 360
           G PVEALTLFRLMVEN HCKPNHVTMVTV+SACAQIGDLQLG WVHEVL+  GR+GIIAS
Sbjct: 301 GFPVEALTLFRLMVENPHCKPNHVTMVTVISACAQIGDLQLGSWVHEVLQRSGRKGIIAS 360

Query: 361 NKMLATALIDMYCKSGSLEKAKEVFHQLTCKDVISFNAMIMGLAVNGEGVEALKLFAQMQ 420
           NKMLATALIDMYCK GSLE+AKEVFHQL  KDVISFNAMIMGLAVNG+G EALKLFAQMQ
Sbjct: 361 NKMLATALIDMYCKCGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQ 420

Query: 421 EFDIRPTPGTFVGLLCACSHSGFLEQGRQIFIEMTSRYLIFPCLEHYACYIDLLARAGLF 480
           E DIRP+ GTF+GLL ACSHSGFLEQG QIFIEMT++YLI P LEHYACYIDLLARAG F
Sbjct: 421 EIDIRPSTGTFIGLLSACSHSGFLEQGHQIFIEMTTQYLISPSLEHYACYIDLLARAGRF 480

Query: 481 EDALEVVSTMPFEPNNFVWSSLLRGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSF 540
           EDALEVVSTMPFEPNNFVWSSLLRGCLLHS FELAQYVSKKLVEVDPENSAGYVMQANSF
Sbjct: 481 EDALEVVSTMPFEPNNFVWSSLLRGCLLHSSFELAQYVSKKLVEVDPENSAGYVMQANSF 540

Query: 541 ATDLQWEDVLTLRSFMREKGVHKQPGQSWIGIDGVVHEFFSTSRSHPYVNVLYNTLNELE 600
           A+D QW+DV  LR FMREKGVHKQPGQSWI IDG VHEFFS ++SHPYV++LY+TLNEL+
Sbjct: 541 ASDRQWDDVSALRWFMREKGVHKQPGQSWISIDGTVHEFFSATKSHPYVDLLYSTLNELD 600

Query: 601 KQMKLVIP 609
           KQ KLVIP
Sbjct: 601 KQTKLVIP 608

[Close]

BLAST of Sed0020135 vs. NCBI nr
Match: KAA0031351.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1010.7 bits (2612), Expect = 5.1e-291
Identity = 497/608 (81.74%), Postives = 550/608 (90.46%), Query Frame = 0


Query: 1   MVYAKSCAVRSICTNSESTSLSNLLQGRISSSHLHQIHARIIRLQKHQDNLIATRLIGHY 60
           M+  KS A+R +  N E  +LS+LLQGRI++SHL QIHAR+ RL KHQDNLIATRLIGHY
Sbjct: 28  MINIKSYAMRCLFVNPEFINLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHY 87

Query: 61  PHSVGLKIFNQLRNPNIFPCNAIIRVLADGNSSFHAFSIFKSLKRFSLFPNDFTFSFLLK 120
           PHSVGL++FNQL  PNIFPCNAIIRVLA+ N+SF A SIFKSLK  SL PNDFTFSFLLK
Sbjct: 88  PHSVGLRVFNQLIRPNIFPCNAIIRVLAEHNTSFLALSIFKSLKHLSLSPNDFTFSFLLK 147

Query: 121 AFYRSCCALNVKQVHTHVLKMGYLGDSFISNAFIGVYAKCLRDVDSARKVFDEMTEREMA 180
           AF+RSC AL+VKQVHTHVLKMGY GDSFISNA +GVYA+ L+D+ SA KVFDEM++REMA
Sbjct: 148 AFHRSCNALDVKQVHTHVLKMGYFGDSFISNALLGVYARGLKDMASAHKVFDEMSDREMA 207

Query: 181 CCWTSLIAGYAQMGLAEKALLLFVMMIEENVQPEDDTMISVLSSCSKFQVAEIEKWVVDL 240
           CCWTSLIAGYAQMGLAEKA+L+FV MI+EN+QPEDDTM+SVLS+CSKFQ+AEIEKWVV L
Sbjct: 208 CCWTSLIAGYAQMGLAEKAMLIFVTMIKENMQPEDDTMVSVLSACSKFQIAEIEKWVVAL 267

Query: 241 GQLVNEFGSKSSGRDSINIVLIYLYGKFGRIEKSKEKFDEIVDKRSVLVWNSMINAYFQN 300
            +LVN+F SKSS  DSINIVLIYLYGK+G +EKS+EKF+EI+DK+SVLVWNSMINAYFQN
Sbjct: 268 RELVNKFDSKSSCCDSINIVLIYLYGKWGMVEKSEEKFNEIIDKKSVLVWNSMINAYFQN 327

Query: 301 GCPVEALTLFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLEHGGRRGIIAS 360
           G PVEALTLFRLMVEN HCKPNHVTMVTV+SACAQIGDLQLG WVHEVL+  GR+GIIAS
Sbjct: 328 GFPVEALTLFRLMVENPHCKPNHVTMVTVISACAQIGDLQLGSWVHEVLQRSGRKGIIAS 387

Query: 361 NKMLATALIDMYCKSGSLEKAKEVFHQLTCKDVISFNAMIMGLAVNGEGVEALKLFAQMQ 420
           NKMLATALID+YCK GSLE+AKEVFHQL  KDVISFNAMIMGLAVNG+G EALKLFAQMQ
Sbjct: 388 NKMLATALIDLYCKCGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQ 447

Query: 421 EFDIRPTPGTFVGLLCACSHSGFLEQGRQIFIEMTSRYLIFPCLEHYACYIDLLARAGLF 480
           E DIRP+ GTF+GLL ACSHSGFLEQG QIFIEMT++YLI P LEHYACYIDLLARAG F
Sbjct: 448 EIDIRPSTGTFIGLLSACSHSGFLEQGHQIFIEMTTQYLISPSLEHYACYIDLLARAGRF 507

Query: 481 EDALEVVSTMPFEPNNFVWSSLLRGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSF 540
           EDALEVVSTMPFEPNNFVWSSLLRGCLLHS FELAQYVSKKLVEVDPENSAGYVMQANSF
Sbjct: 508 EDALEVVSTMPFEPNNFVWSSLLRGCLLHSSFELAQYVSKKLVEVDPENSAGYVMQANSF 567

Query: 541 ATDLQWEDVLTLRSFMREKGVHKQPGQSWIGIDGVVHEFFSTSRSHPYVNVLYNTLNELE 600
           A+D QW+DV  LR FMREKGVHKQPGQSWI IDG VHEFFS ++SHPYV++LY+TLNEL+
Sbjct: 568 ASDRQWDDVSALRWFMREKGVHKQPGQSWISIDGTVHEFFSATKSHPYVDLLYSTLNELD 627

Query: 601 KQMKLVIP 609
           KQ KLVIP
Sbjct: 628 KQTKLVIP 635

[Close]

BLAST of Sed0020135 vs. NCBI nr
Match: XP_031744265.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 1006.9 bits (2602), Expect = 7.4e-290
Identity = 491/600 (81.83%), Postives = 544/600 (90.67%), Query Frame = 0


Query: 9   VRSICTNSESTSLSNLLQGRISSSHLHQIHARIIRLQKHQDNLIATRLIGHYPHSVGLKI 68
           +R +C N E  SLS+LLQGRI++SHL QIHAR+ RL KHQDNLIATRLIGHYPHSVGL++
Sbjct: 1   MRCLCVNPEFISLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPHSVGLRV 60

Query: 69  FNQLRNPNIFPCNAIIRVLADGNSSFHAFSIFKSLKRFSLFPNDFTFSFLLKAFYRSCCA 128
           FNQL  PNIFPCNAIIRVLA+ NSSF A SIFK LK  SL PNDFTFSFLLKAF+RSC A
Sbjct: 61  FNQLIRPNIFPCNAIIRVLAEHNSSFFALSIFKYLKHLSLSPNDFTFSFLLKAFHRSCNA 120

Query: 129 LNVKQVHTHVLKMGYLGDSFISNAFIGVYAKCLRDVDSARKVFDEMTEREMACCWTSLIA 188
           LNVKQVHTHVLKMGY GDSFISN+ +GVYA+ L+++ SA K+FDEM++REMACCWTSLIA
Sbjct: 121 LNVKQVHTHVLKMGYFGDSFISNSLLGVYARGLKEMASAHKLFDEMSDREMACCWTSLIA 180

Query: 189 GYAQMGLAEKALLLFVMMIEENVQPEDDTMISVLSSCSKFQVAEIEKWVVDLGQLVNEFG 248
           GYAQMGLAEKA+LLF MM++EN+QPEDDT++SVLS+CSK Q+AEIEKWVV+L QLVN+  
Sbjct: 181 GYAQMGLAEKAMLLFFMMVKENIQPEDDTIVSVLSACSKLQIAEIEKWVVELRQLVNKCD 240

Query: 249 SKSSGRDSINIVLIYLYGKFGRIEKSKEKFDEIVDKRSVLVWNSMINAYFQNGCPVEALT 308
           SK S  DSINIVLIYLYGK+G +EKS+EKF+E+VDKRSVLVWNSMINAYFQNG PVEALT
Sbjct: 241 SKRSCCDSINIVLIYLYGKWGMVEKSEEKFNEVVDKRSVLVWNSMINAYFQNGFPVEALT 300

Query: 309 LFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLEHGGRRGIIASNKMLATAL 368
           LFRLMVEN HCKPNHVTMVTV+SACAQIGDLQLG WVHEVL+ GGR+GIIASNKMLAT+L
Sbjct: 301 LFRLMVENPHCKPNHVTMVTVISACAQIGDLQLGSWVHEVLQRGGRKGIIASNKMLATSL 360

Query: 369 IDMYCKSGSLEKAKEVFHQLTCKDVISFNAMIMGLAVNGEGVEALKLFAQMQEFDIRPTP 428
           IDMYCK GSLE+AKEVFHQL  KDVI+FNAMIMGLAVN +G EALKLFAQMQE +I P+ 
Sbjct: 361 IDMYCKCGSLERAKEVFHQLINKDVITFNAMIMGLAVNSKGDEALKLFAQMQEINIIPST 420

Query: 429 GTFVGLLCACSHSGFLEQGRQIFIEMTSRYLIFPCLEHYACYIDLLARAGLFEDALEVVS 488
           GTF+GLL ACSHSGFLEQGRQIFIEMT+ YL+ P LEHYACYIDLLARAG F+DALEV+S
Sbjct: 421 GTFIGLLSACSHSGFLEQGRQIFIEMTTHYLVSPSLEHYACYIDLLARAGHFDDALEVIS 480

Query: 489 TMPFEPNNFVWSSLLRGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSFATDLQWED 548
           TMPFEPNNFVWSSLLRGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSFATDLQW+D
Sbjct: 481 TMPFEPNNFVWSSLLRGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSFATDLQWDD 540

Query: 549 VLTLRSFMREKGVHKQPGQSWIGIDGVVHEFFSTSRSHPYVNVLYNTLNELEKQMKLVIP 608
           V  LR FMREKGVHKQPGQSWI IDG VHEFFS ++SHPYV++LY TLNELEKQMKLVIP
Sbjct: 541 VSALRWFMREKGVHKQPGQSWISIDGTVHEFFSATKSHPYVDLLYTTLNELEKQMKLVIP 600

[Close]

BLAST of Sed0020135 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 2.3e-100
Identity = 213/632 (33.70%), Postives = 338/632 (53.48%), Query Frame = 0


Query: 14  TNSESTSLSNLLQGRISSSHLHQIHARIIRLQKHQDNLIATRLIGHYPHS------VGLK 73
           TN+E +   +L++  +S   L Q H  +IR     D   A++L      S         K
Sbjct: 26  TNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARK 85

Query: 74  IFNQLRNPNIFPCNAIIRVLADG-NSSFHAFSIFKSLKRFSLFPNDFTFSFLLKAFYRSC 133
           +F+++  PN F  N +IR  A G +     ++    +     +PN +TF FL+KA     
Sbjct: 86  VFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVS 145

Query: 134 CALNVKQVHTHVLKMGYLGDSFISNAFIGVYAKCLRDVDSARKVFDEMTEREMACCWTSL 193
                + +H   +K     D F++N+ I  Y  C  D+DSA KVF  + E+++   W S+
Sbjct: 146 SLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSC-GDLDSACKVFTTIKEKDVV-SWNSM 205

Query: 194 IAGYAQMGLAEKALLLFVMMIEENVQPEDDTMISVLSSCSKFQVAEIEKWVVDLGQLVNE 253
           I G+ Q G  +KAL LF  M  E+V+    TM+ VLS+C+K +  E  + V    +    
Sbjct: 206 INGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIE---- 265

Query: 254 FGSKSSGRDSINIVL----IYLYGKFGRIEKSKEKFDEIVDK------------------ 313
                  R ++N+ L    + +Y K G IE +K  FD + +K                  
Sbjct: 266 -----ENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDY 325

Query: 314 ------------RSVLVWNSMINAYFQNGCPVEALTLFRLMVENSHCKPNHVTMVTVLSA 373
                       + ++ WN++I+AY QNG P EAL +F  +    + K N +T+V+ LSA
Sbjct: 326 EAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSA 385

Query: 374 CAQIGDLQLGCWVHEVLEHGGRRGIIASNKMLATALIDMYCKSGSLEKAKEVFHQLTCKD 433
           CAQ+G L+LG W+H  ++  G    I  N  + +ALI MY K G LEK++EVF+ +  +D
Sbjct: 386 CAQVGALELGRWIHSYIKKHG----IRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRD 445

Query: 434 VISFNAMIMGLAVNGEGVEALKLFAQMQEFDIRPTPGTFVGLLCACSHSGFLEQGRQIFI 493
           V  ++AMI GLA++G G EA+ +F +MQE +++P   TF  + CACSH+G +++   +F 
Sbjct: 446 VFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFH 505

Query: 494 EMTSRYLIFPCLEHYACYIDLLARAGLFEDALEVVSTMPFEPNNFVWSSLLRGCLLHSRF 553
           +M S Y I P  +HYAC +D+L R+G  E A++ +  MP  P+  VW +LL  C +H+  
Sbjct: 506 QMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANL 565

Query: 554 ELAQYVSKKLVEVDPENSAGYVMQANSFATDLQWEDVLTLRSFMREKGVHKQPGQSWIGI 605
            LA+    +L+E++P N   +V+ +N +A   +WE+V  LR  MR  G+ K+PG S I I
Sbjct: 566 NLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEI 625

[Close]

BLAST of Sed0020135 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 2.5e-99
Identity = 213/619 (34.41%), Postives = 339/619 (54.77%), Query Frame = 0


Query: 23  NLLQGRISSSHLHQIHARIIRLQKHQDNLIATRLIGH---YPHSVGL----KIFNQLRNP 82
           +LL    +   L  IHA++I++  H  N   ++LI      PH  GL     +F  ++ P
Sbjct: 38  SLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEP 97

Query: 83  NIFPCNAIIRVLADGNSSFHAFSIFKSLKRFSLFPNDFTFSFLLKAFYRSCCALNVKQVH 142
           N+   N + R  A  +    A  ++  +    L PN +TF F+LK+  +S      +Q+H
Sbjct: 98  NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIH 157

Query: 143 THVLKMGYLGDSFISNAFIGVYAK--CLRD----------------------------VD 202
            HVLK+G   D ++  + I +Y +   L D                            ++
Sbjct: 158 GHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIE 217

Query: 203 SARKVFDEMTEREMACCWTSLIAGYAQMGLAEKALLLFVMMIEENVQPEDDTMISVLSSC 262
           +A+K+FDE+  +++   W ++I+GYA+ G  ++AL LF  M++ NV+P++ TM++V+S+C
Sbjct: 218 NAQKLFDEIPVKDVV-SWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC 277

Query: 263 SKFQVAEIEK----WVVDLGQLVNEFGSKSSGRDSINIVLIYLYGKFGRIEKSKEKFDEI 322
           ++    E+ +    W+ D G     FGS       I   LI LY K G +E +   F+ +
Sbjct: 278 AQSGSIELGRQVHLWIDDHG-----FGSNL----KIVNALIDLYSKCGELETACGLFERL 337

Query: 323 VDKRSVLVWNSMINAYFQNGCPVEALTLFRLMVENSHCKPNHVTMVTVLSACAQIGDLQL 382
             K  V+ WN++I  Y       EAL LF+ M+ +    PN VTM+++L ACA +G + +
Sbjct: 338 PYK-DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE-TPNDVTMLSILPACAHLGAIDI 397

Query: 383 GCWVHEVLEHGGRRGIIASNKMLATALIDMYCKSGSLEKAKEVFHQLTCKDVISFNAMIM 442
           G W+H  ++   R   + +   L T+LIDMY K G +E A +VF+ +  K + S+NAMI 
Sbjct: 398 GRWIHVYIDK--RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIF 457

Query: 443 GLAVNGEGVEALKLFAQMQEFDIRPTPGTFVGLLCACSHSGFLEQGRQIFIEMTSRYLIF 502
           G A++G    +  LF++M++  I+P   TFVGLL ACSHSG L+ GR IF  MT  Y + 
Sbjct: 458 GFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMT 517

Query: 503 PCLEHYACYIDLLARAGLFEDALEVVSTMPFEPNNFVWSSLLRGCLLHSRFELAQYVSKK 562
           P LEHY C IDLL  +GLF++A E+++ M  EP+  +W SLL+ C +H   EL +  ++ 
Sbjct: 518 PKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAEN 577

Query: 563 LVEVDPENSAGYVMQANSFATDLQWEDVLTLRSFMREKGVHKQPGQSWIGIDGVVHEFFS 601
           L++++PEN   YV+ +N +A+  +W +V   R+ + +KG+ K PG S I ID VVHEF  
Sbjct: 578 LIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFII 637

[Close]

BLAST of Sed0020135 vs. ExPASy Swiss-Prot
Match: Q9SR82 (Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H84 PE=3 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 1.3e-95
Identity = 196/604 (32.45%), Postives = 328/604 (54.30%), Query Frame = 0


Query: 11  SICTNSESTS----LSNLLQGRISSSHLHQIHARIIRLQKHQD----NLIATRLIGHYPH 70
           SI T   +TS    +  L+    + +HL QIH  +I    H D    NL+  R +     
Sbjct: 2   SIVTVPSATSKVQQIKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQT 61

Query: 71  SVGLKIFNQLRNPNIFPCNAIIRVLADGNSSFHAFSIFKSLKRFSLFPNDFTFSFLLKAF 130
                +F+  + PNIF  N++I    + +       +F S+++  L+ + FTF  +LKA 
Sbjct: 62  KYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKAC 121

Query: 131 YRSCCALNVKQVHTHVLKMGYLGDSFISNAFIGVYAKCLRDVDSARKVFDEMTEREMACC 190
            R+        +H+ V+K G+  D     + + +Y+   R ++ A K+FDE+ +R +   
Sbjct: 122 TRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGR-LNDAHKLFDEIPDRSVV-T 181

Query: 191 WTSLIAGYAQMGLAEKALLLFVMMIEENVQPEDDTMISVLSSCSKFQVAEIEKWVVDLGQ 250
           WT+L +GY   G   +A+ LF  M+E  V+P+   ++ VLS+C      +  +W+V   +
Sbjct: 182 WTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIV---K 241

Query: 251 LVNEFGSKSSGRDSINIVLIYLYGKFGRIEKSKEKFDEIVDKRSVLVWNSMINAYFQNGC 310
            + E   + +    +   L+ LY K G++EK++  FD +V+K  ++ W++MI  Y  N  
Sbjct: 242 YMEEMEMQKN--SFVRTTLVNLYAKCGKMEKARSVFDSMVEK-DIVTWSTMIQGYASNSF 301

Query: 311 PVEALTLFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLEHGGRRGIIASNK 370
           P E + LF  M++  + KP+  ++V  LS+CA +G L LG W   +++    R    +N 
Sbjct: 302 PKEGIELFLQMLQ-ENLKPDQFSIVGFLSSCASLGALDLGEWGISLID----RHEFLTNL 361

Query: 371 MLATALIDMYCKSGSLEKAKEVFHQLTCKDVISFNAMIMGLAVNGEGVEALKLFAQMQEF 430
            +A ALIDMY K G++ +  EVF ++  KD++  NA I GLA NG    +  +F Q ++ 
Sbjct: 362 FMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKL 421

Query: 431 DIRPTPGTFVGLLCACSHSGFLEQGRQIFIEMTSRYLIFPCLEHYACYIDLLARAGLFED 490
            I P   TF+GLLC C H+G ++ G + F  ++  Y +   +EHY C +DL  RAG+ +D
Sbjct: 422 GISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDD 481

Query: 491 ALEVVSTMPFEPNNFVWSSLLRGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSFAT 550
           A  ++  MP  PN  VW +LL GC L    +LA+ V K+L+ ++P N+  YV  +N ++ 
Sbjct: 482 AYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSV 541

Query: 551 DLQWEDVLTLRSFMREKGVHKQPGQSWIGIDGVVHEFFSTSRSHPYVNVLYNTLNELEKQ 607
             +W++   +R  M +KG+ K PG SWI ++G VHEF +  +SHP  + +Y  L +L  +
Sbjct: 542 GGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNE 592

[Close]

BLAST of Sed0020135 vs. ExPASy Swiss-Prot
Match: Q9LS72 (Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E27 PE=2 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 1.4e-94
Identity = 194/575 (33.74%), Postives = 322/575 (56.00%), Query Frame = 0


Query: 32  SHLHQIHARIIRLQKHQDNLIATRLIGHY----PHSVGLKIFNQLRNPNIFPCNAIIRVL 91
           + + Q+HA+IIR   H+D  IA +LI         ++ +++FNQ++ PN+  CN++IR  
Sbjct: 33  NQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAH 92

Query: 92  ADGNSSFHAFSIFKSLKRFSLFPNDFTFSFLLKAFYRSCCALNVKQVHTHVLKMGYLGDS 151
           A  +  + AF +F  ++RF LF ++FT+ FLLKA         VK +H H+ K+G   D 
Sbjct: 93  AQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDI 152

Query: 152 FISNAFIGVYAKC-LRDVDSARKVFDEMTEREMACCWTSLIAGYAQMGLAEKALLLFVMM 211
           ++ NA I  Y++C    V  A K+F++M+ER+    W S++ G  + G    A  LF  M
Sbjct: 153 YVPNALIDCYSRCGGLGVRDAMKLFEKMSERD-TVSWNSMLGGLVKAGELRDARRLFDEM 212

Query: 212 IEENVQPEDDTMISVLSSCSKFQVAEIEKWVVDLGQLVNEFGSKSSGRDSIN-IVLIYLY 271
            + ++    +TM+   + C +   A              E   K   R++++   ++  Y
Sbjct: 213 PQRDL-ISWNTMLDGYARCREMSKA-------------FELFEKMPERNTVSWSTMVMGY 272

Query: 272 GKFGRIEKSKEKFDEI-VDKRSVLVWNSMINAYFQNGCPVEALTLFRLMVENSHCKPNHV 331
            K G +E ++  FD++ +  ++V+ W  +I  Y + G   EA  L   MV  S  K +  
Sbjct: 273 SKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVA-SGLKFDAA 332

Query: 332 TMVTVLSACAQIGDLQLGCWVHEVLEHGGRRGIIASNKMLATALIDMYCKSGSLEKAKEV 391
            ++++L+AC + G L LG  +H +L    +R  + SN  +  AL+DMY K G+L+KA +V
Sbjct: 333 AVISILAACTESGLLSLGMRIHSIL----KRSNLGSNAYVLNALLDMYAKCGNLKKAFDV 392

Query: 392 FHQLTCKDVISFNAMIMGLAVNGEGVEALKLFAQMQEFDIRPTPGTFVGLLCACSHSGFL 451
           F+ +  KD++S+N M+ GL V+G G EA++LF++M+   IRP   TF+ +LC+C+H+G +
Sbjct: 393 FNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLI 452

Query: 452 EQGRQIFIEMTSRYLIFPCLEHYACYIDLLARAGLFEDALEVVSTMPFEPNNFVWSSLLR 511
           ++G   F  M   Y + P +EHY C +DLL R G  ++A++VV TMP EPN  +W +LL 
Sbjct: 453 DEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLG 512

Query: 512 GCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSFATDLQWEDVLTLRSFMREKGVHKQ 571
            C +H+  ++A+ V   LV++DP +   Y + +N +A    WE V  +RS M+  GV K 
Sbjct: 513 ACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKP 572

Query: 572 PGQSWIGIDGVVHEFFSTSRSHPYVNVLYNTLNEL 600
            G S + ++  +HEF    +SHP  + +Y  L  L
Sbjct: 573 SGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSL 587

[Close]

BLAST of Sed0020135 vs. ExPASy Swiss-Prot
Match: Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 7.1e-94
Identity = 212/655 (32.37%), Postives = 348/655 (53.13%), Query Frame = 0


Query: 21  LSNLLQGRISSSHLHQIHARIIRLQKHQDNLIATRLIGHYPH----SVGLKIFNQLRNPN 80
           L + ++ ++S+ ++  +HA +I+     +  I  RLI  Y        G ++F+++   N
Sbjct: 26  LDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRN 85

Query: 81  IFPCNAIIRVLADGNSSFHAFSIFKSLKR-------------------------FSLFP- 140
           I+  N+++  L        A S+F+S+                           F++   
Sbjct: 86  IYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHK 145

Query: 141 -----NDFTFSFLLKAFYRSCCALNVK----QVHTHVLKMGYLGDSFISNAFIGVYAKCL 200
                N+++F+ +L A    C  LN      QVH+ + K  +L D +I +A + +Y+KC 
Sbjct: 146 EGFVLNEYSFASVLSA----CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKC- 205

Query: 201 RDVDSARKVFDEMTEREMACCWTSLIAGYAQMGLAEKALLLFVMMIEENVQPEDDTMISV 260
            +V+ A++VFDEM +R +   W SLI  + Q G A +AL +F MM+E  V+P++ T+ SV
Sbjct: 206 GNVNDAQRVFDEMGDRNVV-SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASV 265

Query: 261 LSSCSKFQVAEIEKWVVDLGQLVNEFGSKSSGRDSINIVLIYLYGKFGRIEKSKEKFDEI 320
           +S+C+     ++ + V   G++V     K      ++   + +Y K  RI++++  FD +
Sbjct: 266 ISACASLSAIKVGQEV--HGRVVK--NDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSM 325

Query: 321 ------------------------------VDKRSVLVWNSMINAYFQNGCPVEALTLFR 380
                                         + +R+V+ WN++I  Y QNG   EAL+LF 
Sbjct: 326 PIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFC 385

Query: 381 LMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVH-EVLEHGGR-RGIIASNKMLATALI 440
           L+   S C P H +   +L ACA + +L LG   H  VL+HG + +     +  +  +LI
Sbjct: 386 LLKRESVC-PTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLI 445

Query: 441 DMYCKSGSLEKAKEVFHQLTCKDVISFNAMIMGLAVNGEGVEALKLFAQMQEFDIRPTPG 500
           DMY K G +E+   VF ++  +D +S+NAMI+G A NG G EAL+LF +M E   +P   
Sbjct: 446 DMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHI 505

Query: 501 TFVGLLCACSHSGFLEQGRQIFIEMTSRYLIFPCLEHYACYIDLLARAGLFEDALEVVST 560
           T +G+L AC H+GF+E+GR  F  MT  + + P  +HY C +DLL RAG  E+A  ++  
Sbjct: 506 TMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEE 565

Query: 561 MPFEPNNFVWSSLLRGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSFATDLQWEDV 605
           MP +P++ +W SLL  C +H    L +YV++KL+EV+P NS  YV+ +N +A   +WEDV
Sbjct: 566 MPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDV 625

[Close]

BLAST of Sed0020135 vs. ExPASy TrEMBL
Match: A0A5D3C6A4 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001060 PE=4 SV=1)

HSP 1 Score: 1011.9 bits (2615), Expect = 1.1e-291
Identity = 498/608 (81.91%), Postives = 550/608 (90.46%), Query Frame = 0


Query: 1   MVYAKSCAVRSICTNSESTSLSNLLQGRISSSHLHQIHARIIRLQKHQDNLIATRLIGHY 60
           M+  KS A+R +  N E  +LS+LLQGRI++SHL QIHAR+ RL KHQDNLIATRLIGHY
Sbjct: 28  MINIKSYAMRCLFVNPEFINLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHY 87

Query: 61  PHSVGLKIFNQLRNPNIFPCNAIIRVLADGNSSFHAFSIFKSLKRFSLFPNDFTFSFLLK 120
           PHSVGL++FNQL  PNIFPCNAIIRVLA+ N+SF A SIFKSLK  SL PNDFTFSFLLK
Sbjct: 88  PHSVGLRVFNQLIRPNIFPCNAIIRVLAEHNTSFLALSIFKSLKHLSLSPNDFTFSFLLK 147

Query: 121 AFYRSCCALNVKQVHTHVLKMGYLGDSFISNAFIGVYAKCLRDVDSARKVFDEMTEREMA 180
           AF+RSC AL+VKQVHTHVLKMGY GDSFISNA +GVYA+ L+D+ SA KVFDEM++REMA
Sbjct: 148 AFHRSCNALDVKQVHTHVLKMGYFGDSFISNALLGVYARGLKDMASAHKVFDEMSDREMA 207

Query: 181 CCWTSLIAGYAQMGLAEKALLLFVMMIEENVQPEDDTMISVLSSCSKFQVAEIEKWVVDL 240
           CCWTSLIAGYAQMGLAEKA+L+FV MI+EN+QPEDDTM+SVLS+CSKFQ+AEIEKWVV L
Sbjct: 208 CCWTSLIAGYAQMGLAEKAMLIFVTMIKENMQPEDDTMVSVLSACSKFQIAEIEKWVVAL 267

Query: 241 GQLVNEFGSKSSGRDSINIVLIYLYGKFGRIEKSKEKFDEIVDKRSVLVWNSMINAYFQN 300
            +LVN+F SKSS  DSINIVLIYLYGK+G +EKS+EKF+EI+DK+SVLVWNSMINAYFQN
Sbjct: 268 RELVNKFDSKSSCCDSINIVLIYLYGKWGMVEKSEEKFNEIIDKKSVLVWNSMINAYFQN 327

Query: 301 GCPVEALTLFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLEHGGRRGIIAS 360
           G PVEALTLFRLMVEN HCKPNHVTMVTV+SACAQIGDLQLG WVHEVL+  GR+GIIAS
Sbjct: 328 GFPVEALTLFRLMVENPHCKPNHVTMVTVISACAQIGDLQLGSWVHEVLQRSGRKGIIAS 387

Query: 361 NKMLATALIDMYCKSGSLEKAKEVFHQLTCKDVISFNAMIMGLAVNGEGVEALKLFAQMQ 420
           NKMLATALIDMYCK GSLE+AKEVFHQL  KDVISFNAMIMGLAVNG+G EALKLFAQMQ
Sbjct: 388 NKMLATALIDMYCKCGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQ 447

Query: 421 EFDIRPTPGTFVGLLCACSHSGFLEQGRQIFIEMTSRYLIFPCLEHYACYIDLLARAGLF 480
           E DIRP+ GTF+GLL ACSHSGFLEQG QIFIEMT++YLI P LEHYACYIDLLARAG F
Sbjct: 448 EIDIRPSTGTFIGLLSACSHSGFLEQGHQIFIEMTTQYLISPSLEHYACYIDLLARAGRF 507

Query: 481 EDALEVVSTMPFEPNNFVWSSLLRGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSF 540
           EDALEVVSTMPFEPNNFVWSSLLRGCLLHS FELAQYVSKKLVEVDPENSAGYVMQANSF
Sbjct: 508 EDALEVVSTMPFEPNNFVWSSLLRGCLLHSSFELAQYVSKKLVEVDPENSAGYVMQANSF 567

Query: 541 ATDLQWEDVLTLRSFMREKGVHKQPGQSWIGIDGVVHEFFSTSRSHPYVNVLYNTLNELE 600
           A+D QW+DV  LR FMREKGVHKQPGQSWI IDG VHEFFS ++SHPYV++LY+TLNEL+
Sbjct: 568 ASDRQWDDVSALRWFMREKGVHKQPGQSWISIDGTVHEFFSATKSHPYVDLLYSTLNELD 627

Query: 601 KQMKLVIP 609
           KQ KLVIP
Sbjct: 628 KQTKLVIP 635

[Close]

BLAST of Sed0020135 vs. ExPASy TrEMBL
Match: A0A1S3BZG8 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495291 PE=4 SV=1)

HSP 1 Score: 1011.9 bits (2615), Expect = 1.1e-291
Identity = 498/608 (81.91%), Postives = 550/608 (90.46%), Query Frame = 0


Query: 1   MVYAKSCAVRSICTNSESTSLSNLLQGRISSSHLHQIHARIIRLQKHQDNLIATRLIGHY 60
           M+  KS A+R +  N E  +LS+LLQGRI++SHL QIHAR+ RL KHQDNLIATRLIGHY
Sbjct: 1   MINIKSYAMRCLFVNPEFINLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHY 60

Query: 61  PHSVGLKIFNQLRNPNIFPCNAIIRVLADGNSSFHAFSIFKSLKRFSLFPNDFTFSFLLK 120
           PHSVGL++FNQL  PNIFPCNAIIRVLA+ N+SF A SIFKSLK  SL PNDFTFSFLLK
Sbjct: 61  PHSVGLRVFNQLIRPNIFPCNAIIRVLAEHNTSFLALSIFKSLKHLSLSPNDFTFSFLLK 120

Query: 121 AFYRSCCALNVKQVHTHVLKMGYLGDSFISNAFIGVYAKCLRDVDSARKVFDEMTEREMA 180
           AF+RSC AL+VKQVHTHVLKMGY GDSFISNA +GVYA+ L+D+ SA KVFDEM++REMA
Sbjct: 121 AFHRSCNALDVKQVHTHVLKMGYFGDSFISNALLGVYARGLKDMASAHKVFDEMSDREMA 180

Query: 181 CCWTSLIAGYAQMGLAEKALLLFVMMIEENVQPEDDTMISVLSSCSKFQVAEIEKWVVDL 240
           CCWTSLIAGYAQMGLAEKA+L+FV MI+EN+QPEDDTM+SVLS+CSKFQ+AEIEKWVV L
Sbjct: 181 CCWTSLIAGYAQMGLAEKAMLIFVTMIKENMQPEDDTMVSVLSACSKFQIAEIEKWVVAL 240

Query: 241 GQLVNEFGSKSSGRDSINIVLIYLYGKFGRIEKSKEKFDEIVDKRSVLVWNSMINAYFQN 300
            +LVN+F SKSS  DSINIVLIYLYGK+G +EKS+EKF+EI+DK+SVLVWNSMINAYFQN
Sbjct: 241 RELVNKFDSKSSCCDSINIVLIYLYGKWGMVEKSEEKFNEIIDKKSVLVWNSMINAYFQN 300

Query: 301 GCPVEALTLFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLEHGGRRGIIAS 360
           G PVEALTLFRLMVEN HCKPNHVTMVTV+SACAQIGDLQLG WVHEVL+  GR+GIIAS
Sbjct: 301 GFPVEALTLFRLMVENPHCKPNHVTMVTVISACAQIGDLQLGSWVHEVLQRSGRKGIIAS 360

Query: 361 NKMLATALIDMYCKSGSLEKAKEVFHQLTCKDVISFNAMIMGLAVNGEGVEALKLFAQMQ 420
           NKMLATALIDMYCK GSLE+AKEVFHQL  KDVISFNAMIMGLAVNG+G EALKLFAQMQ
Sbjct: 361 NKMLATALIDMYCKCGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQ 420

Query: 421 EFDIRPTPGTFVGLLCACSHSGFLEQGRQIFIEMTSRYLIFPCLEHYACYIDLLARAGLF 480
           E DIRP+ GTF+GLL ACSHSGFLEQG QIFIEMT++YLI P LEHYACYIDLLARAG F
Sbjct: 421 EIDIRPSTGTFIGLLSACSHSGFLEQGHQIFIEMTTQYLISPSLEHYACYIDLLARAGRF 480

Query: 481 EDALEVVSTMPFEPNNFVWSSLLRGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSF 540
           EDALEVVSTMPFEPNNFVWSSLLRGCLLHS FELAQYVSKKLVEVDPENSAGYVMQANSF
Sbjct: 481 EDALEVVSTMPFEPNNFVWSSLLRGCLLHSSFELAQYVSKKLVEVDPENSAGYVMQANSF 540

Query: 541 ATDLQWEDVLTLRSFMREKGVHKQPGQSWIGIDGVVHEFFSTSRSHPYVNVLYNTLNELE 600
           A+D QW+DV  LR FMREKGVHKQPGQSWI IDG VHEFFS ++SHPYV++LY+TLNEL+
Sbjct: 541 ASDRQWDDVSALRWFMREKGVHKQPGQSWISIDGTVHEFFSATKSHPYVDLLYSTLNELD 600

Query: 601 KQMKLVIP 609
           KQ KLVIP
Sbjct: 601 KQTKLVIP 608

[Close]

BLAST of Sed0020135 vs. ExPASy TrEMBL
Match: A0A5A7SP64 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G001050 PE=4 SV=1)

HSP 1 Score: 1010.7 bits (2612), Expect = 2.5e-291
Identity = 497/608 (81.74%), Postives = 550/608 (90.46%), Query Frame = 0


Query: 1   MVYAKSCAVRSICTNSESTSLSNLLQGRISSSHLHQIHARIIRLQKHQDNLIATRLIGHY 60
           M+  KS A+R +  N E  +LS+LLQGRI++SHL QIHAR+ RL KHQDNLIATRLIGHY
Sbjct: 28  MINIKSYAMRCLFVNPEFINLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHY 87

Query: 61  PHSVGLKIFNQLRNPNIFPCNAIIRVLADGNSSFHAFSIFKSLKRFSLFPNDFTFSFLLK 120
           PHSVGL++FNQL  PNIFPCNAIIRVLA+ N+SF A SIFKSLK  SL PNDFTFSFLLK
Sbjct: 88  PHSVGLRVFNQLIRPNIFPCNAIIRVLAEHNTSFLALSIFKSLKHLSLSPNDFTFSFLLK 147

Query: 121 AFYRSCCALNVKQVHTHVLKMGYLGDSFISNAFIGVYAKCLRDVDSARKVFDEMTEREMA 180
           AF+RSC AL+VKQVHTHVLKMGY GDSFISNA +GVYA+ L+D+ SA KVFDEM++REMA
Sbjct: 148 AFHRSCNALDVKQVHTHVLKMGYFGDSFISNALLGVYARGLKDMASAHKVFDEMSDREMA 207

Query: 181 CCWTSLIAGYAQMGLAEKALLLFVMMIEENVQPEDDTMISVLSSCSKFQVAEIEKWVVDL 240
           CCWTSLIAGYAQMGLAEKA+L+FV MI+EN+QPEDDTM+SVLS+CSKFQ+AEIEKWVV L
Sbjct: 208 CCWTSLIAGYAQMGLAEKAMLIFVTMIKENMQPEDDTMVSVLSACSKFQIAEIEKWVVAL 267

Query: 241 GQLVNEFGSKSSGRDSINIVLIYLYGKFGRIEKSKEKFDEIVDKRSVLVWNSMINAYFQN 300
            +LVN+F SKSS  DSINIVLIYLYGK+G +EKS+EKF+EI+DK+SVLVWNSMINAYFQN
Sbjct: 268 RELVNKFDSKSSCCDSINIVLIYLYGKWGMVEKSEEKFNEIIDKKSVLVWNSMINAYFQN 327

Query: 301 GCPVEALTLFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLEHGGRRGIIAS 360
           G PVEALTLFRLMVEN HCKPNHVTMVTV+SACAQIGDLQLG WVHEVL+  GR+GIIAS
Sbjct: 328 GFPVEALTLFRLMVENPHCKPNHVTMVTVISACAQIGDLQLGSWVHEVLQRSGRKGIIAS 387

Query: 361 NKMLATALIDMYCKSGSLEKAKEVFHQLTCKDVISFNAMIMGLAVNGEGVEALKLFAQMQ 420
           NKMLATALID+YCK GSLE+AKEVFHQL  KDVISFNAMIMGLAVNG+G EALKLFAQMQ
Sbjct: 388 NKMLATALIDLYCKCGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQ 447

Query: 421 EFDIRPTPGTFVGLLCACSHSGFLEQGRQIFIEMTSRYLIFPCLEHYACYIDLLARAGLF 480
           E DIRP+ GTF+GLL ACSHSGFLEQG QIFIEMT++YLI P LEHYACYIDLLARAG F
Sbjct: 448 EIDIRPSTGTFIGLLSACSHSGFLEQGHQIFIEMTTQYLISPSLEHYACYIDLLARAGRF 507

Query: 481 EDALEVVSTMPFEPNNFVWSSLLRGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSF 540
           EDALEVVSTMPFEPNNFVWSSLLRGCLLHS FELAQYVSKKLVEVDPENSAGYVMQANSF
Sbjct: 508 EDALEVVSTMPFEPNNFVWSSLLRGCLLHSSFELAQYVSKKLVEVDPENSAGYVMQANSF 567

Query: 541 ATDLQWEDVLTLRSFMREKGVHKQPGQSWIGIDGVVHEFFSTSRSHPYVNVLYNTLNELE 600
           A+D QW+DV  LR FMREKGVHKQPGQSWI IDG VHEFFS ++SHPYV++LY+TLNEL+
Sbjct: 568 ASDRQWDDVSALRWFMREKGVHKQPGQSWISIDGTVHEFFSATKSHPYVDLLYSTLNELD 627

Query: 601 KQMKLVIP 609
           KQ KLVIP
Sbjct: 628 KQTKLVIP 635

[Close]

BLAST of Sed0020135 vs. ExPASy TrEMBL
Match: A0A0A0K4I3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071580 PE=4 SV=1)

HSP 1 Score: 1006.9 bits (2602), Expect = 3.6e-290
Identity = 491/600 (81.83%), Postives = 544/600 (90.67%), Query Frame = 0


Query: 9   VRSICTNSESTSLSNLLQGRISSSHLHQIHARIIRLQKHQDNLIATRLIGHYPHSVGLKI 68
           +R +C N E  SLS+LLQGRI++SHL QIHAR+ RL KHQDNLIATRLIGHYPHSVGL++
Sbjct: 1   MRCLCVNPEFISLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPHSVGLRV 60

Query: 69  FNQLRNPNIFPCNAIIRVLADGNSSFHAFSIFKSLKRFSLFPNDFTFSFLLKAFYRSCCA 128
           FNQL  PNIFPCNAIIRVLA+ NSSF A SIFK LK  SL PNDFTFSFLLKAF+RSC A
Sbjct: 61  FNQLIRPNIFPCNAIIRVLAEHNSSFFALSIFKYLKHLSLSPNDFTFSFLLKAFHRSCNA 120

Query: 129 LNVKQVHTHVLKMGYLGDSFISNAFIGVYAKCLRDVDSARKVFDEMTEREMACCWTSLIA 188
           LNVKQVHTHVLKMGY GDSFISN+ +GVYA+ L+++ SA K+FDEM++REMACCWTSLIA
Sbjct: 121 LNVKQVHTHVLKMGYFGDSFISNSLLGVYARGLKEMASAHKLFDEMSDREMACCWTSLIA 180

Query: 189 GYAQMGLAEKALLLFVMMIEENVQPEDDTMISVLSSCSKFQVAEIEKWVVDLGQLVNEFG 248
           GYAQMGLAEKA+LLF MM++EN+QPEDDT++SVLS+CSK Q+AEIEKWVV+L QLVN+  
Sbjct: 181 GYAQMGLAEKAMLLFFMMVKENIQPEDDTIVSVLSACSKLQIAEIEKWVVELRQLVNKCD 240

Query: 249 SKSSGRDSINIVLIYLYGKFGRIEKSKEKFDEIVDKRSVLVWNSMINAYFQNGCPVEALT 308
           SK S  DSINIVLIYLYGK+G +EKS+EKF+E+VDKRSVLVWNSMINAYFQNG PVEALT
Sbjct: 241 SKRSCCDSINIVLIYLYGKWGMVEKSEEKFNEVVDKRSVLVWNSMINAYFQNGFPVEALT 300

Query: 309 LFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLEHGGRRGIIASNKMLATAL 368
           LFRLMVEN HCKPNHVTMVTV+SACAQIGDLQLG WVHEVL+ GGR+GIIASNKMLAT+L
Sbjct: 301 LFRLMVENPHCKPNHVTMVTVISACAQIGDLQLGSWVHEVLQRGGRKGIIASNKMLATSL 360

Query: 369 IDMYCKSGSLEKAKEVFHQLTCKDVISFNAMIMGLAVNGEGVEALKLFAQMQEFDIRPTP 428
           IDMYCK GSLE+AKEVFHQL  KDVI+FNAMIMGLAVN +G EALKLFAQMQE +I P+ 
Sbjct: 361 IDMYCKCGSLERAKEVFHQLINKDVITFNAMIMGLAVNSKGDEALKLFAQMQEINIIPST 420

Query: 429 GTFVGLLCACSHSGFLEQGRQIFIEMTSRYLIFPCLEHYACYIDLLARAGLFEDALEVVS 488
           GTF+GLL ACSHSGFLEQGRQIFIEMT+ YL+ P LEHYACYIDLLARAG F+DALEV+S
Sbjct: 421 GTFIGLLSACSHSGFLEQGRQIFIEMTTHYLVSPSLEHYACYIDLLARAGHFDDALEVIS 480

Query: 489 TMPFEPNNFVWSSLLRGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSFATDLQWED 548
           TMPFEPNNFVWSSLLRGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSFATDLQW+D
Sbjct: 481 TMPFEPNNFVWSSLLRGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSFATDLQWDD 540

Query: 549 VLTLRSFMREKGVHKQPGQSWIGIDGVVHEFFSTSRSHPYVNVLYNTLNELEKQMKLVIP 608
           V  LR FMREKGVHKQPGQSWI IDG VHEFFS ++SHPYV++LY TLNELEKQMKLVIP
Sbjct: 541 VSALRWFMREKGVHKQPGQSWISIDGTVHEFFSATKSHPYVDLLYTTLNELEKQMKLVIP 600

[Close]

BLAST of Sed0020135 vs. ExPASy TrEMBL
Match: A0A6J1GKT0 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454858 PE=4 SV=1)

HSP 1 Score: 997.7 bits (2578), Expect = 2.2e-287
Identity = 493/608 (81.09%), Postives = 545/608 (89.64%), Query Frame = 0


Query: 1   MVYAKSCAVRSICTNSESTSLSNLLQGRISSSHLHQIHARIIRLQKHQDNLIATRLIGHY 60
           MV  KS A+RS C N E  +LS+LLQGRI+SS L QIH R+ RL KHQDNLIATRLIGHY
Sbjct: 1   MVNGKSYAMRSSCINLEFINLSDLLQGRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHY 60

Query: 61  PHSVGLKIFNQLRNPNIFPCNAIIRVLADGNSSFHAFSIFKSLKRFSLFPNDFTFSFLLK 120
           P+SVG+++FNQL  PNIFPCNAIIRVLA+ N SF AFSIFKSLKR SL PNDFTFSFLLK
Sbjct: 61  PYSVGIRVFNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLK 120

Query: 121 AFYRSCCALNVKQVHTHVLKMGYLGDSFISNAFIGVYAKCLRDVDSARKVFDEMTEREMA 180
           AF+RS  + NVKQVHTHV+KMGYLGDSFISNA +GVYA+ L+D+ SA  +FDEM+EREMA
Sbjct: 121 AFHRSSHSPNVKQVHTHVMKMGYLGDSFISNALLGVYARGLKDMGSAHNMFDEMSEREMA 180

Query: 181 CCWTSLIAGYAQMGLAEKALLLFVMMIEENVQPEDDTMISVLSSCSKFQVAEIEKWVVDL 240
           CCWTSLIAGYA MGLAEKALLLFVMMI+EN+QPEDDTM+SVLS+CSK Q+AEIEKWV +L
Sbjct: 181 CCWTSLIAGYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAEL 240

Query: 241 GQLVNEFGSKSSGRDSINIVLIYLYGKFGRIEKSKEKFDEIVDKRSVLVWNSMINAYFQN 300
            QLVNEF S     DSINIVL+YLYGK+G+IEKS+EKF+EIVDKRS +VWNSMINAYFQN
Sbjct: 241 TQLVNEFDSCC---DSINIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQN 300

Query: 301 GCPVEALTLFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLEHGGRRGIIAS 360
           GCPVEALTLFRLM+EN HCKPNHVTMVTVLSACAQIGDLQLG  VHE LEHGGRRGIIAS
Sbjct: 301 GCPVEALTLFRLMLENPHCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHGGRRGIIAS 360

Query: 361 NKMLATALIDMYCKSGSLEKAKEVFHQLTCKDVISFNAMIMGLAVNGEGVEALKLFAQMQ 420
           NKMLATALIDMYCKSGSLEKAK+VFH+L CKDVISFNAMIMGLAVNG+  EALKLF+QMQ
Sbjct: 361 NKMLATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQ 420

Query: 421 EFDIRPTPGTFVGLLCACSHSGFLEQGRQIFIEMTSRYLIFPCLEHYACYIDLLARAGLF 480
           E DI+PT GTF+GLL ACSHSGFLEQGRQIFI+M +RY   P L+HYACYIDLLARAG  
Sbjct: 421 ESDIKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLDHYACYIDLLARAGCV 480

Query: 481 EDALEVVSTMPFEPNNFVWSSLLRGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSF 540
           EDALEVVSTMPFEPNNFVWSSLLRGCLLHSRFELA+YVSKKLVEVDPE+SAGYVMQANSF
Sbjct: 481 EDALEVVSTMPFEPNNFVWSSLLRGCLLHSRFELARYVSKKLVEVDPESSAGYVMQANSF 540

Query: 541 ATDLQWEDVLTLRSFMREKGVHKQPGQSWIGIDGVVHEFFSTSRSHPYVNVLYNTLNELE 600
           ATDLQW+DV  LR FMREKGVHKQPG+SWI IDG VHEFFS ++SHP V++LY+TL+ELE
Sbjct: 541 ATDLQWDDVSALRWFMREKGVHKQPGRSWISIDGTVHEFFSATKSHPCVDLLYSTLSELE 600

Query: 601 KQMKLVIP 609
           +QMKLVIP
Sbjct: 601 RQMKLVIP 605

[Close]

BLAST of Sed0020135 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 367.9 bits (943), Expect = 1.6e-101
Identity = 213/632 (33.70%), Postives = 338/632 (53.48%), Query Frame = 0


Query: 14  TNSESTSLSNLLQGRISSSHLHQIHARIIRLQKHQDNLIATRLIGHYPHS------VGLK 73
           TN+E +   +L++  +S   L Q H  +IR     D   A++L      S         K
Sbjct: 26  TNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARK 85

Query: 74  IFNQLRNPNIFPCNAIIRVLADG-NSSFHAFSIFKSLKRFSLFPNDFTFSFLLKAFYRSC 133
           +F+++  PN F  N +IR  A G +     ++    +     +PN +TF FL+KA     
Sbjct: 86  VFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVS 145

Query: 134 CALNVKQVHTHVLKMGYLGDSFISNAFIGVYAKCLRDVDSARKVFDEMTEREMACCWTSL 193
                + +H   +K     D F++N+ I  Y  C  D+DSA KVF  + E+++   W S+
Sbjct: 146 SLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSC-GDLDSACKVFTTIKEKDVV-SWNSM 205

Query: 194 IAGYAQMGLAEKALLLFVMMIEENVQPEDDTMISVLSSCSKFQVAEIEKWVVDLGQLVNE 253
           I G+ Q G  +KAL LF  M  E+V+    TM+ VLS+C+K +  E  + V    +    
Sbjct: 206 INGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIE---- 265

Query: 254 FGSKSSGRDSINIVL----IYLYGKFGRIEKSKEKFDEIVDK------------------ 313
                  R ++N+ L    + +Y K G IE +K  FD + +K                  
Sbjct: 266 -----ENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDY 325

Query: 314 ------------RSVLVWNSMINAYFQNGCPVEALTLFRLMVENSHCKPNHVTMVTVLSA 373
                       + ++ WN++I+AY QNG P EAL +F  +    + K N +T+V+ LSA
Sbjct: 326 EAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSA 385

Query: 374 CAQIGDLQLGCWVHEVLEHGGRRGIIASNKMLATALIDMYCKSGSLEKAKEVFHQLTCKD 433
           CAQ+G L+LG W+H  ++  G    I  N  + +ALI MY K G LEK++EVF+ +  +D
Sbjct: 386 CAQVGALELGRWIHSYIKKHG----IRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRD 445

Query: 434 VISFNAMIMGLAVNGEGVEALKLFAQMQEFDIRPTPGTFVGLLCACSHSGFLEQGRQIFI 493
           V  ++AMI GLA++G G EA+ +F +MQE +++P   TF  + CACSH+G +++   +F 
Sbjct: 446 VFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFH 505

Query: 494 EMTSRYLIFPCLEHYACYIDLLARAGLFEDALEVVSTMPFEPNNFVWSSLLRGCLLHSRF 553
           +M S Y I P  +HYAC +D+L R+G  E A++ +  MP  P+  VW +LL  C +H+  
Sbjct: 506 QMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANL 565

Query: 554 ELAQYVSKKLVEVDPENSAGYVMQANSFATDLQWEDVLTLRSFMREKGVHKQPGQSWIGI 605
            LA+    +L+E++P N   +V+ +N +A   +WE+V  LR  MR  G+ K+PG S I I
Sbjct: 566 NLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEI 625

[Close]

BLAST of Sed0020135 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 364.4 bits (934), Expect = 1.8e-100
Identity = 213/619 (34.41%), Postives = 339/619 (54.77%), Query Frame = 0


Query: 23  NLLQGRISSSHLHQIHARIIRLQKHQDNLIATRLIGH---YPHSVGL----KIFNQLRNP 82
           +LL    +   L  IHA++I++  H  N   ++LI      PH  GL     +F  ++ P
Sbjct: 38  SLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEP 97

Query: 83  NIFPCNAIIRVLADGNSSFHAFSIFKSLKRFSLFPNDFTFSFLLKAFYRSCCALNVKQVH 142
           N+   N + R  A  +    A  ++  +    L PN +TF F+LK+  +S      +Q+H
Sbjct: 98  NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIH 157

Query: 143 THVLKMGYLGDSFISNAFIGVYAK--CLRD----------------------------VD 202
            HVLK+G   D ++  + I +Y +   L D                            ++
Sbjct: 158 GHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIE 217

Query: 203 SARKVFDEMTEREMACCWTSLIAGYAQMGLAEKALLLFVMMIEENVQPEDDTMISVLSSC 262
           +A+K+FDE+  +++   W ++I+GYA+ G  ++AL LF  M++ NV+P++ TM++V+S+C
Sbjct: 218 NAQKLFDEIPVKDVV-SWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC 277

Query: 263 SKFQVAEIEK----WVVDLGQLVNEFGSKSSGRDSINIVLIYLYGKFGRIEKSKEKFDEI 322
           ++    E+ +    W+ D G     FGS       I   LI LY K G +E +   F+ +
Sbjct: 278 AQSGSIELGRQVHLWIDDHG-----FGSNL----KIVNALIDLYSKCGELETACGLFERL 337

Query: 323 VDKRSVLVWNSMINAYFQNGCPVEALTLFRLMVENSHCKPNHVTMVTVLSACAQIGDLQL 382
             K  V+ WN++I  Y       EAL LF+ M+ +    PN VTM+++L ACA +G + +
Sbjct: 338 PYK-DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE-TPNDVTMLSILPACAHLGAIDI 397

Query: 383 GCWVHEVLEHGGRRGIIASNKMLATALIDMYCKSGSLEKAKEVFHQLTCKDVISFNAMIM 442
           G W+H  ++   R   + +   L T+LIDMY K G +E A +VF+ +  K + S+NAMI 
Sbjct: 398 GRWIHVYIDK--RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIF 457

Query: 443 GLAVNGEGVEALKLFAQMQEFDIRPTPGTFVGLLCACSHSGFLEQGRQIFIEMTSRYLIF 502
           G A++G    +  LF++M++  I+P   TFVGLL ACSHSG L+ GR IF  MT  Y + 
Sbjct: 458 GFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMT 517

Query: 503 PCLEHYACYIDLLARAGLFEDALEVVSTMPFEPNNFVWSSLLRGCLLHSRFELAQYVSKK 562
           P LEHY C IDLL  +GLF++A E+++ M  EP+  +W SLL+ C +H   EL +  ++ 
Sbjct: 518 PKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAEN 577

Query: 563 LVEVDPENSAGYVMQANSFATDLQWEDVLTLRSFMREKGVHKQPGQSWIGIDGVVHEFFS 601
           L++++PEN   YV+ +N +A+  +W +V   R+ + +KG+ K PG S I ID VVHEF  
Sbjct: 578 LIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFII 637

[Close]

BLAST of Sed0020135 vs. TAIR 10
Match: AT3G08820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 352.1 bits (902), Expect = 9.2e-97
Identity = 196/604 (32.45%), Postives = 328/604 (54.30%), Query Frame = 0


Query: 11  SICTNSESTS----LSNLLQGRISSSHLHQIHARIIRLQKHQD----NLIATRLIGHYPH 70
           SI T   +TS    +  L+    + +HL QIH  +I    H D    NL+  R +     
Sbjct: 2   SIVTVPSATSKVQQIKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQT 61

Query: 71  SVGLKIFNQLRNPNIFPCNAIIRVLADGNSSFHAFSIFKSLKRFSLFPNDFTFSFLLKAF 130
                +F+  + PNIF  N++I    + +       +F S+++  L+ + FTF  +LKA 
Sbjct: 62  KYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKAC 121

Query: 131 YRSCCALNVKQVHTHVLKMGYLGDSFISNAFIGVYAKCLRDVDSARKVFDEMTEREMACC 190
            R+        +H+ V+K G+  D     + + +Y+   R ++ A K+FDE+ +R +   
Sbjct: 122 TRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGR-LNDAHKLFDEIPDRSVV-T 181

Query: 191 WTSLIAGYAQMGLAEKALLLFVMMIEENVQPEDDTMISVLSSCSKFQVAEIEKWVVDLGQ 250
           WT+L +GY   G   +A+ LF  M+E  V+P+   ++ VLS+C      +  +W+V   +
Sbjct: 182 WTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIV---K 241

Query: 251 LVNEFGSKSSGRDSINIVLIYLYGKFGRIEKSKEKFDEIVDKRSVLVWNSMINAYFQNGC 310
            + E   + +    +   L+ LY K G++EK++  FD +V+K  ++ W++MI  Y  N  
Sbjct: 242 YMEEMEMQKN--SFVRTTLVNLYAKCGKMEKARSVFDSMVEK-DIVTWSTMIQGYASNSF 301

Query: 311 PVEALTLFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLEHGGRRGIIASNK 370
           P E + LF  M++  + KP+  ++V  LS+CA +G L LG W   +++    R    +N 
Sbjct: 302 PKEGIELFLQMLQ-ENLKPDQFSIVGFLSSCASLGALDLGEWGISLID----RHEFLTNL 361

Query: 371 MLATALIDMYCKSGSLEKAKEVFHQLTCKDVISFNAMIMGLAVNGEGVEALKLFAQMQEF 430
            +A ALIDMY K G++ +  EVF ++  KD++  NA I GLA NG    +  +F Q ++ 
Sbjct: 362 FMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKL 421

Query: 431 DIRPTPGTFVGLLCACSHSGFLEQGRQIFIEMTSRYLIFPCLEHYACYIDLLARAGLFED 490
            I P   TF+GLLC C H+G ++ G + F  ++  Y +   +EHY C +DL  RAG+ +D
Sbjct: 422 GISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDD 481

Query: 491 ALEVVSTMPFEPNNFVWSSLLRGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSFAT 550
           A  ++  MP  PN  VW +LL GC L    +LA+ V K+L+ ++P N+  YV  +N ++ 
Sbjct: 482 AYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSV 541

Query: 551 DLQWEDVLTLRSFMREKGVHKQPGQSWIGIDGVVHEFFSTSRSHPYVNVLYNTLNELEKQ 607
             +W++   +R  M +KG+ K PG SWI ++G VHEF +  +SHP  + +Y  L +L  +
Sbjct: 542 GGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNE 592

[Close]

BLAST of Sed0020135 vs. TAIR 10
Match: AT3G29230.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 348.6 bits (893), Expect = 1.0e-95
Identity = 194/575 (33.74%), Postives = 322/575 (56.00%), Query Frame = 0


Query: 32  SHLHQIHARIIRLQKHQDNLIATRLIGHY----PHSVGLKIFNQLRNPNIFPCNAIIRVL 91
           + + Q+HA+IIR   H+D  IA +LI         ++ +++FNQ++ PN+  CN++IR  
Sbjct: 33  NQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAH 92

Query: 92  ADGNSSFHAFSIFKSLKRFSLFPNDFTFSFLLKAFYRSCCALNVKQVHTHVLKMGYLGDS 151
           A  +  + AF +F  ++RF LF ++FT+ FLLKA         VK +H H+ K+G   D 
Sbjct: 93  AQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDI 152

Query: 152 FISNAFIGVYAKC-LRDVDSARKVFDEMTEREMACCWTSLIAGYAQMGLAEKALLLFVMM 211
           ++ NA I  Y++C    V  A K+F++M+ER+    W S++ G  + G    A  LF  M
Sbjct: 153 YVPNALIDCYSRCGGLGVRDAMKLFEKMSERD-TVSWNSMLGGLVKAGELRDARRLFDEM 212

Query: 212 IEENVQPEDDTMISVLSSCSKFQVAEIEKWVVDLGQLVNEFGSKSSGRDSIN-IVLIYLY 271
            + ++    +TM+   + C +   A              E   K   R++++   ++  Y
Sbjct: 213 PQRDL-ISWNTMLDGYARCREMSKA-------------FELFEKMPERNTVSWSTMVMGY 272

Query: 272 GKFGRIEKSKEKFDEI-VDKRSVLVWNSMINAYFQNGCPVEALTLFRLMVENSHCKPNHV 331
            K G +E ++  FD++ +  ++V+ W  +I  Y + G   EA  L   MV  S  K +  
Sbjct: 273 SKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVA-SGLKFDAA 332

Query: 332 TMVTVLSACAQIGDLQLGCWVHEVLEHGGRRGIIASNKMLATALIDMYCKSGSLEKAKEV 391
            ++++L+AC + G L LG  +H +L    +R  + SN  +  AL+DMY K G+L+KA +V
Sbjct: 333 AVISILAACTESGLLSLGMRIHSIL----KRSNLGSNAYVLNALLDMYAKCGNLKKAFDV 392

Query: 392 FHQLTCKDVISFNAMIMGLAVNGEGVEALKLFAQMQEFDIRPTPGTFVGLLCACSHSGFL 451
           F+ +  KD++S+N M+ GL V+G G EA++LF++M+   IRP   TF+ +LC+C+H+G +
Sbjct: 393 FNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLI 452

Query: 452 EQGRQIFIEMTSRYLIFPCLEHYACYIDLLARAGLFEDALEVVSTMPFEPNNFVWSSLLR 511
           ++G   F  M   Y + P +EHY C +DLL R G  ++A++VV TMP EPN  +W +LL 
Sbjct: 453 DEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLG 512

Query: 512 GCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSFATDLQWEDVLTLRSFMREKGVHKQ 571
            C +H+  ++A+ V   LV++DP +   Y + +N +A    WE V  +RS M+  GV K 
Sbjct: 513 ACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKP 572

Query: 572 PGQSWIGIDGVVHEFFSTSRSHPYVNVLYNTLNEL 600
            G S + ++  +HEF    +SHP  + +Y  L  L
Sbjct: 573 SGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSL 587

[Close]

BLAST of Sed0020135 vs. TAIR 10
Match: AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 346.3 bits (887), Expect = 5.1e-95
Identity = 212/655 (32.37%), Postives = 348/655 (53.13%), Query Frame = 0


Query: 21  LSNLLQGRISSSHLHQIHARIIRLQKHQDNLIATRLIGHYPH----SVGLKIFNQLRNPN 80
           L + ++ ++S+ ++  +HA +I+     +  I  RLI  Y        G ++F+++   N
Sbjct: 26  LDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRN 85

Query: 81  IFPCNAIIRVLADGNSSFHAFSIFKSLKR-------------------------FSLFP- 140
           I+  N+++  L        A S+F+S+                           F++   
Sbjct: 86  IYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHK 145

Query: 141 -----NDFTFSFLLKAFYRSCCALNVK----QVHTHVLKMGYLGDSFISNAFIGVYAKCL 200
                N+++F+ +L A    C  LN      QVH+ + K  +L D +I +A + +Y+KC 
Sbjct: 146 EGFVLNEYSFASVLSA----CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKC- 205

Query: 201 RDVDSARKVFDEMTEREMACCWTSLIAGYAQMGLAEKALLLFVMMIEENVQPEDDTMISV 260
            +V+ A++VFDEM +R +   W SLI  + Q G A +AL +F MM+E  V+P++ T+ SV
Sbjct: 206 GNVNDAQRVFDEMGDRNVV-SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASV 265

Query: 261 LSSCSKFQVAEIEKWVVDLGQLVNEFGSKSSGRDSINIVLIYLYGKFGRIEKSKEKFDEI 320
           +S+C+     ++ + V   G++V     K      ++   + +Y K  RI++++  FD +
Sbjct: 266 ISACASLSAIKVGQEV--HGRVVK--NDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSM 325

Query: 321 ------------------------------VDKRSVLVWNSMINAYFQNGCPVEALTLFR 380
                                         + +R+V+ WN++I  Y QNG   EAL+LF 
Sbjct: 326 PIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFC 385

Query: 381 LMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVH-EVLEHGGR-RGIIASNKMLATALI 440
           L+   S C P H +   +L ACA + +L LG   H  VL+HG + +     +  +  +LI
Sbjct: 386 LLKRESVC-PTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLI 445

Query: 441 DMYCKSGSLEKAKEVFHQLTCKDVISFNAMIMGLAVNGEGVEALKLFAQMQEFDIRPTPG 500
           DMY K G +E+   VF ++  +D +S+NAMI+G A NG G EAL+LF +M E   +P   
Sbjct: 446 DMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHI 505

Query: 501 TFVGLLCACSHSGFLEQGRQIFIEMTSRYLIFPCLEHYACYIDLLARAGLFEDALEVVST 560
           T +G+L AC H+GF+E+GR  F  MT  + + P  +HY C +DLL RAG  E+A  ++  
Sbjct: 506 TMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEE 565

Query: 561 MPFEPNNFVWSSLLRGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSFATDLQWEDV 605
           MP +P++ +W SLL  C +H    L +YV++KL+EV+P NS  YV+ +N +A   +WEDV
Sbjct: 566 MPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDV 625

The following BLAST results are available for this feature:

BLAST of Sed0020135 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888799.1	5.3e-296	84.21	pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Benin...	[more]
TYK06804.1	2.3e-291	81.91	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_008455016.1	2.3e-291	81.91	PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-...	[more]
KAA0031351.1	5.1e-291	81.74	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_031744265.1	7.4e-290	81.83	pentatricopeptide repeat-containing protein At1g08070, chloroplastic isoform X1 ...	[more]

BLAST of Sed0020135 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82380	2.3e-100	33.70	Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop...	[more]
Q9LN01	2.5e-99	34.41	Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop...	[more]
Q9SR82	1.3e-95	32.45	Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis th...	[more]
Q9LS72	1.4e-94	33.74	Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX...	[more]
Q9SIT7	7.1e-94	32.37	Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX...	[more]

BLAST of Sed0020135 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C6A4	1.1e-291	81.91	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BZG8	1.1e-291	81.91	pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isofor...	[more]
A0A5A7SP64	2.5e-291	81.74	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A0A0K4I3	3.6e-290	81.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071580 PE=4 SV=1	[more]
A0A6J1GKT0	2.2e-287	81.09	pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isofor...	[more]

BLAST of Sed0020135 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G29760.1	1.6e-101	33.70	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G08070.1	1.8e-100	34.41	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G08820.1	9.2e-97	32.45	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G29230.1	1.0e-95	33.74	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G13600.1	5.1e-95	32.37	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 394..427 e-value: 2.2E-6 score: 25.5 coord: 289..322 e-value: 1.2E-8 score: 32.5 coord: 182..213 e-value: 1.3E-5 score: 23.0 coord: 366..389 e-value: 9.1E-5 score: 20.4
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 469..490 e-value: 1.3 score: 9.4 coord: 182..211 e-value: 3.3E-6 score: 27.0
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 75..122 e-value: 0.0043 score: 17.1
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 286..334 e-value: 3.4E-9 score: 36.7 coord: 391..438 e-value: 2.3E-8 score: 34.1
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 179..213 score: 9.700809
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 392..426 score: 11.103854
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 286..320 score: 9.744654
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 363..586 e-value: 1.6E-35 score: 125.0 coord: 32..253 e-value: 5.4E-24 score: 87.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 256..342 e-value: 2.7E-16 score: 61.4
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 357..531
None	No IPR available	PANTHER	PTHR47925:SF67	SUBFAMILY NOT NAMED	coord: 25..605
None	No IPR available	PANTHER	PTHR47925	OS01G0913400 PROTEIN-RELATED	coord: 25..605

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0020135.1	Sed0020135.1	mRNA
Sed0020135.2	Sed0020135.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1900865	chloroplast RNA modification
biological_process	GO:0016556	mRNA modification
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0005515	protein binding