Sed0020125 (gene) Chayote v1

Overview


Name	Sed0020125
Type	gene
Organism	Sechium edule (Chayote v1)
Description	selT-like protein
Location	LG01: 6081622 .. 6083294 (-)
RNA-Seq Expression	Sed0020125
Synteny	Sed0020125

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCGAAGAAATTCAGTTCTTGCATTGCTATCGCTGTCAGTTTTGTGTTTGGATATCTACGATTTCTTCTCCACTCATCCGCCGCCAATTTCATCAAATTCTGTGGTTTTTCAAAATCACTCAAACAGCAACCATTTGAATCATACAGTTTCTCGCATATTAAATCAGACGCAGATGTCGAGTTCGAATCAGACATATAATGATACGATTCGCATCGAATTCGCCTCTCTCACTTCTTATAGGGTACATTTCATTTCACTCAATGTCTTGCGTTCTACTTGATTTTGGGGATTTAGTTTCTTCATCATCATTTTGTGCTGATTCTTTTTTTGCTTTATCTGTGGAATTTGTTGGAGTTATGATGAAATGATTTCGAGTGAAATCTGGTTCCTGGAAAGTGGAATTTTACTTTGTGCTTGTTAAATTAGGGCACTGCAGATCATTGTCTTACTGCTTGTTTTGATAATTAAATCTATGAGAGAAATGGATGTGTTCTTTCACCATTCTTATCGATCCTTCACATTTCTCCTTAAACTTTATGGATCCATCCCAACTTTATGTATTAGAACAATCCAATTCAATTCACAATTTTTTAAATTGGGTTGGCTGGGATTTTTGAGTTGTGTTTATCTCATTTTTTCCTCTTTTAAATACAACTCATACTTAATCTTAGGTTGCATGATTCCTTGCCAATATGCTAAAAGATTATCTTATTAGTTAAAATTAATTTATAGAATATCATTCTTAGTTCGGGTTGAGCTATGTTGAATAAGTTGAAAATTGGTCAATTGAAAAGCTTGACTCGACTCAACAAAAGTTATATCAAAAGGAAACTATATAATTCAACCCAACTCTTATTATTTTTGTTTAGTGGTCCGATTTATTTGAGTTGTTGATGTCTTGATCGTGTTAATCTGCCCTTATAAATTTTTAGTCTCACACTAAAAAAAAGAAAATCACAATTGAAGTATTTAATATGATCATTTATTTAATCTTAGAATCTATGTGAGGCAAATCTCTTATATACATATATTTGGGAATGTCTGACCACCTTACGTTCACTTCAATTATTGTTAAAGTCAAACTATTACAGTGGTTGGGGTTTCGTTATTGCCACTACTTTTTACCTTCCTTTGTATCTGAAAAGTCTTTGCTCTTTGTCATGTTGTTTGGGCAGAGGTGCTACCATGTCGGTTAAGGATCTGGCAGAAAAAACTTTCCCAGGAATGAATGTAACTCTTTCTAAGCATCATCCAGATTGGACAAAATACATTGCTACAAAGCTTATAACAACTGCACAAGTACTGATTATAATGATAGTGATGGCTGGTAATCATATTTTTCTCTACTTGAAAATGTCAGCAGCACCTTCTTGGTACCATCCCTTGGATGCACACAAATTTGCTGCCAGTGCAATCCCTTGGCTACTTGGCTGCATAGCCATAAACTATCTCCAGAACACTGAGCCCTTTTTAGTTTTCCTCAATGATGAACTGGTACTCTAACTTTTTTAAGTGTATTTTCAGAAAGCATGATTCTGTTTGCCCAAGTATCAAGTTTCATTTTCTCTTGTTTTTTCTGTTATTCAGATGTTCTCTAAACAACTCGTGGGAAGGTTTCCCGGAGCAACCGAGATGAAAGAAATCATTCGAAGTCGACTTGCTGGTTGA

mRNA sequence

ATGGATCGAAGAAATTCAGTTCTTGCATTGCTATCGCTGTCAGTTTTGTGTTTGGATATCTACGATTTCTTCTCCACTCATCCGCCGCCAATTTCATCAAATTCTGTGGTTTTTCAAAATCACTCAAACAGCAACCATTTGAATCATACAGTTTCTCGCATATTAAATCAGACGCAGATGTCGAGTTCGAATCAGACATATAATGATACGATTCGCATCGAATTCGCCTCTCTCACTTCTTATAGGGTACATTTCATTTCACTCAATGTCTTGCGTGCTACCATGTCGGTTAAGGATCTGGCAGAAAAAACTTTCCCAGGAATGAATGTAACTCTTTCTAAGCATCATCCAGATTGGACAAAATACATTGCTACAAAGCTTATAACAACTGCACAAGTACTGATTATAATGATAGTGATGGCTGGTAATCATATTTTTCTCTACTTGAAAATGTCAGCAGCACCTTCTTGGTACCATCCCTTGGATGCACACAAATTTGCTGCCAGTGCAATCCCTTGGCTACTTGGCTGCATAGCCATAAACTATCTCCAGAACACTGAGCCCTTTTTAGTTTTCCTCAATGATGAACTGATGTTCTCTAAACAACTCGTGGGAAGGTTTCCCGGAGCAACCGAGATGAAAGAAATCATTCGAAGTCGACTTGCTGGTTGA

Coding sequence (CDS)

ATGGATCGAAGAAATTCAGTTCTTGCATTGCTATCGCTGTCAGTTTTGTGTTTGGATATCTACGATTTCTTCTCCACTCATCCGCCGCCAATTTCATCAAATTCTGTGGTTTTTCAAAATCACTCAAACAGCAACCATTTGAATCATACAGTTTCTCGCATATTAAATCAGACGCAGATGTCGAGTTCGAATCAGACATATAATGATACGATTCGCATCGAATTCGCCTCTCTCACTTCTTATAGGGTACATTTCATTTCACTCAATGTCTTGCGTGCTACCATGTCGGTTAAGGATCTGGCAGAAAAAACTTTCCCAGGAATGAATGTAACTCTTTCTAAGCATCATCCAGATTGGACAAAATACATTGCTACAAAGCTTATAACAACTGCACAAGTACTGATTATAATGATAGTGATGGCTGGTAATCATATTTTTCTCTACTTGAAAATGTCAGCAGCACCTTCTTGGTACCATCCCTTGGATGCACACAAATTTGCTGCCAGTGCAATCCCTTGGCTACTTGGCTGCATAGCCATAAACTATCTCCAGAACACTGAGCCCTTTTTAGTTTTCCTCAATGATGAACTGATGTTCTCTAAACAACTCGTGGGAAGGTTTCCCGGAGCAACCGAGATGAAAGAAATCATTCGAAGTCGACTTGCTGGTTGA

Protein sequence

MDRRNSVLALLSLSVLCLDIYDFFSTHPPPISSNSVVFQNHSNSNHLNHTVSRILNQTQMSSSNQTYNDTIRIEFASLTSYRVHFISLNVLRATMSVKDLAEKTFPGMNVTLSKHHPDWTKYIATKLITTAQVLIIMIVMAGNHIFLYLKMSAAPSWYHPLDAHKFAASAIPWLLGCIAINYLQNTEPFLVFLNDELMFSKQLVGRFPGATEMKEIIRSRLAG

Homology

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BLAST of Sed0020125 vs. NCBI nr
Match: XP_022148433.1 (selT-like protein [Momordica charantia])

HSP 1 Score: 228.8 bits (582), Expect = 4.6e-56
Identity = 137/242 (56.61%), Postives = 159/242 (65.70%), Query Frame = 0


Query: 1   MDRRNSVLALLSLSVLCLDIYDFFSTHPPPISSNSVVFQNHSNSN--------------- 60
           MDRR  +L LL LSV C DIY FFST PPP SSNS+VF +   +N               
Sbjct: 1   MDRRVLLLTLLPLSVFCFDIYXFFST-PPPKSSNSLVFHHPHGANLNQTFTAKLNQTLTA 60

Query: 61  HLNHTVSRILNQTQMSSSNQT----YNDTIRIEFASLTSYRVHFISLNVLRATMSVKDLA 120
           +LN T+   LN+TQ  SSNQT      DTI I+F+SL SYR           +MS+K L 
Sbjct: 61  NLNRTLGADLNRTQSGSSNQTQTANVGDTILIKFSSLCSYR---------GTSMSIKLLV 120

Query: 121 EKTFPGMNVTLSKHHPDWTKYIATKLITTAQVLIIMIVMAGNHIFLYLKMSAAPSWYHPL 180
            + FPG+NVTLS H PD TKY+ TK I+TAQVLII+IVMAG +I   ++M   P WYH L
Sbjct: 121 LENFPGINVTLSHHPPDLTKYLTTKFISTAQVLIIIIVMAGGYILAEMRM-PIPPWYHRL 180

Query: 181 DAHKFAASAIPWLLGCIAINYLQNTEPFLVFLNDELMFSKQLVGRFPGATEMKEIIRSRL 224
            AHKF   AIPWLLG IAINYLQNTEPF V+ NDEL+F K   GRFPG TEMKE+IRSRL
Sbjct: 181 AAHKFFVIAIPWLLGSIAINYLQNTEPFEVYFNDELVFCKLQAGRFPGVTEMKELIRSRL 231

[Close]

BLAST of Sed0020125 vs. NCBI nr
Match: BBH04639.1 (SELT-like protein precursor [Prunus dulcis])

HSP 1 Score: 129.0 bits (323), Expect = 5.0e-26
Identity = 78/221 (35.29%), Postives = 117/221 (52.94%), Query Frame = 0


Query: 1   MDRRNSVLALLSLSVLCLDIYDFFSTHPPPISSNSVVFQNHSNSNHLNHTVSRILNQTQM 60
           MDR   +L  L L + C D+ + F+  PPP         +H +  H    V++     + 
Sbjct: 4   MDRTQILLLGLPLFLFCTDLLNLFAPPPPPPHKPPHHHHHHHHLQHQPSPVAKDFPSQKP 63

Query: 61  SSSNQTYNDTIRIEFASLTSYRVHFISLNVLRATMSVKDLAEKTFPGMNVTLSKHHPDWT 120
           S+       T++I F +  SY+ +          +++  + E +FPG++V LS H P   
Sbjct: 64  SAVGLGAGSTVKISFCTSCSYKGN---------ALTITKMLESSFPGIHVVLSNHPPPLP 123

Query: 121 KYIATKLITTAQVLIIMIVMAGNHIFLYLKMSAAPSWYHPLDAHKFAASAIPWLLGCIAI 180
           K + +KL+  AQV +  IVMAG HIF  L +   P WY+ L A++F   A  WLLG    
Sbjct: 124 KRVLSKLVPVAQVGVFGIVMAGEHIFPMLGIMTPPPWYYSLRANRFGTIASTWLLGNALQ 183

Query: 181 NYLQNTEPFLVFLNDELMFSKQLVGRFPGATEMKEIIRSRL 222
           ++LQ T  F VFLNDEL+FSK   GRFPG  E+++ I ++L
Sbjct: 184 SFLQGTGAFEVFLNDELVFSKLKEGRFPGEIELRDDIAAKL 215

[Close]

BLAST of Sed0020125 vs. NCBI nr
Match: XP_007205839.1 (selT-like protein [Prunus persica] >XP_034219953.1 selT-like protein [Prunus dulcis] >ONH99884.1 hypothetical protein PRUPE_6G055700 [Prunus persica] >VVA16563.1 PREDICTED: selT [Prunus dulcis])

HSP 1 Score: 129.0 bits (323), Expect = 5.0e-26
Identity = 78/221 (35.29%), Postives = 117/221 (52.94%), Query Frame = 0


Query: 1   MDRRNSVLALLSLSVLCLDIYDFFSTHPPPISSNSVVFQNHSNSNHLNHTVSRILNQTQM 60
           MDR   +L  L L + C D+ + F+  PPP         +H +  H    V++     + 
Sbjct: 1   MDRTQILLLGLPLFLFCTDLLNLFAPPPPPPHKPPHHHHHHHHLQHQPSPVAKDFPSQKP 60

Query: 61  SSSNQTYNDTIRIEFASLTSYRVHFISLNVLRATMSVKDLAEKTFPGMNVTLSKHHPDWT 120
           S+       T++I F +  SY+ +          +++  + E +FPG++V LS H P   
Sbjct: 61  SAVGLGAGSTVKISFCTSCSYKGN---------ALTITKMLESSFPGIHVVLSNHPPPLP 120

Query: 121 KYIATKLITTAQVLIIMIVMAGNHIFLYLKMSAAPSWYHPLDAHKFAASAIPWLLGCIAI 180
           K + +KL+  AQV +  IVMAG HIF  L +   P WY+ L A++F   A  WLLG    
Sbjct: 121 KRVLSKLVPVAQVGVFGIVMAGEHIFPMLGIMTPPPWYYSLRANRFGTIASTWLLGNALQ 180

Query: 181 NYLQNTEPFLVFLNDELMFSKQLVGRFPGATEMKEIIRSRL 222
           ++LQ T  F VFLNDEL+FSK   GRFPG  E+++ I ++L
Sbjct: 181 SFLQGTGAFEVFLNDELVFSKLKEGRFPGEIELRDDIAAKL 212

[Close]

BLAST of Sed0020125 vs. NCBI nr
Match: CAB4282259.1 (unnamed protein product [Prunus armeniaca] >CAB4312667.1 unnamed protein product [Prunus armeniaca])

HSP 1 Score: 127.9 bits (320), Expect = 1.1e-25
Identity = 80/227 (35.24%), Postives = 120/227 (52.86%), Query Frame = 0


Query: 1   MDRRNSVLALLSLSVLCLDIYDFFSTHPPPISSNSVVFQNHSNSNHLNHTVSRILNQT-- 60
           MDR   +L  L L + C D+ + F+  PPP         +H + +HL H  S +  +   
Sbjct: 1   MDRAQILLLGLPLFLFCTDLLNLFAPSPPPPHKPP---HHHHHHHHLQHQPSPVAKENLD 60

Query: 61  ----QMSSSNQTYNDTIRIEFASLTSYRVHFISLNVLRATMSVKDLAEKTFPGMNVTLSK 120
               + S+       T++I F +  SY+ +          +++  + E +FPG++V LS 
Sbjct: 61  FPSQKPSAVGLGAGSTVKISFCTSCSYKGN---------AVTITKMLESSFPGIHVVLSN 120

Query: 121 HHPDWTKYIATKLITTAQVLIIMIVMAGNHIFLYLKMSAAPSWYHPLDAHKFAASAIPWL 180
           H P   K + +KL+  AQV +  IVMAG HIF  L +   P WY+ L A++F   A  WL
Sbjct: 121 HPPPLPKRVLSKLVPVAQVGVFGIVMAGEHIFPMLGIMTPPPWYYSLRANRFGTIASTWL 180

Query: 181 LGCIAINYLQNTEPFLVFLNDELMFSKQLVGRFPGATEMKEIIRSRL 222
           LG    ++LQ T  F VFLNDEL+FSK   GRFPG  E+++ I ++L
Sbjct: 181 LGNALQSFLQGTGAFEVFLNDELVFSKLKEGRFPGEIELRDDIAAKL 215

[Close]

BLAST of Sed0020125 vs. NCBI nr
Match: CAA2980256.1 (Hypothetical predicted protein [Olea europaea subsp. europaea])

HSP 1 Score: 127.1 bits (318), Expect = 1.9e-25
Identity = 81/230 (35.22%), Postives = 123/230 (53.48%), Query Frame = 0


Query: 1   MDRRNSVLALLSLSVLCLDIYDFFSTHPPPISSNSVVFQNHSNSNHLNHTVSRILNQTQM 60
           MDR   +L  L L + C DI   FS  PPP    +    +H + +H +++   I  Q Q 
Sbjct: 1   MDRAQLLLVGLPLFLFCSDIVSLFS--PPPAKPATTPLHHHHHHHHQSNSPPLIQQQQQQ 60

Query: 61  SS--------SNQTYNDTIRIEFASLTSYRVHFISLNVLRATMSVKDLAEKTFPGMNVTL 120
           SS        S     +T++I+F S  SYR            +++K++ E  FPG+NV L
Sbjct: 61  SSLEFPSQKASGIGIGNTVKIDFCSSCSYR---------GTAVTMKNMLETQFPGINVIL 120

Query: 121 SKHHPDWTKYIATKLITTAQVLIIMIVMAGNHIFLYLKMSAAPSWYHPLDAHKFAASAIP 180
           + + P   K + +KL+   Q  +I I++AG  IF  L  +  PSWY+ L A+KF + A  
Sbjct: 121 ANYPPPLPKRLLSKLVPIVQFGMIGIIVAGEQIFPRLGFAVPPSWYYSLRANKFGSMAST 180

Query: 181 WLLGCIAINYLQNTEPFLVFLNDELMFSKQLVGRFPGATEMKEIIRSRLA 223
           WLLG    ++LQ++  F V+ NDEL+FSK    RFPG  E+K+++  R+A
Sbjct: 181 WLLGNFVQSFLQSSGAFEVYCNDELVFSKLKENRFPGEIELKDLVGRRVA 219

[Close]

BLAST of Sed0020125 vs. ExPASy Swiss-Prot
Match: Q9STZ2 (SelT-like protein OS=Arabidopsis thaliana OX=3702 GN=At3g47300 PE=2 SV=2)

HSP 1 Score: 111.7 bits (278), Expect = 1.1e-23
Identity = 72/217 (33.18%), Postives = 115/217 (53.00%), Query Frame = 0


Query: 1   MDRRNSVLALLSLSVLCLDIYDFFSTHPPPISSNSVVFQNHSNSNHLNHTVSRILNQTQM 60
           MD+   +L  L + +LC D+++ F T PPP S      Q+ S       ++S  L+    
Sbjct: 1   MDKTQLILLGLPIFLLCSDLFNLF-TPPPPKS------QHQSPP-----SISETLDFPAQ 60

Query: 61  SSSNQTYNDTIRIEFASLTSYRVHFISLNVLRATMSVKDLAEKTFPGMNVTLSKHHPDWT 120
            S+   Y +T+ I F    SY+            +S+K + E  FPG++V L+ +     
Sbjct: 61  KSTGVGYGNTVEINFCISCSYK---------GTAVSMKKMLESVFPGLDVVLANYPAPAP 120

Query: 121 KYIATKLITTAQVLIIMIVMAGNHIFLYLKMSAAPSWYHPLDAHKFAASAIPWLLGCIAI 180
           K I  K++  AQV +I ++M G  IF  + ++  P+WYH L A++F + A  WLLG    
Sbjct: 121 KRILAKVVPVAQVGVIGLIMGGEQIFPMIGIAQPPAWYHSLRANRFGSMASTWLLGNFLQ 180

Query: 181 NYLQNTEPFLVFLNDELMFSKQLVGRFPGATEMKEII 218
           ++LQ++  F V  N EL+FSK   GRFPG  E++++I
Sbjct: 181 SFLQSSGAFEVSCNGELVFSKLKEGRFPGEIELRDLI 196

[Close]

BLAST of Sed0020125 vs. ExPASy TrEMBL
Match: A0A6J1D431 (selT-like protein OS=Momordica charantia OX=3673 GN=LOC111017081 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 2.2e-56
Identity = 137/242 (56.61%), Postives = 159/242 (65.70%), Query Frame = 0


Query: 1   MDRRNSVLALLSLSVLCLDIYDFFSTHPPPISSNSVVFQNHSNSN--------------- 60
           MDRR  +L LL LSV C DIY FFST PPP SSNS+VF +   +N               
Sbjct: 1   MDRRVLLLTLLPLSVFCFDIYXFFST-PPPKSSNSLVFHHPHGANLNQTFTAKLNQTLTA 60

Query: 61  HLNHTVSRILNQTQMSSSNQT----YNDTIRIEFASLTSYRVHFISLNVLRATMSVKDLA 120
           +LN T+   LN+TQ  SSNQT      DTI I+F+SL SYR           +MS+K L 
Sbjct: 61  NLNRTLGADLNRTQSGSSNQTQTANVGDTILIKFSSLCSYR---------GTSMSIKLLV 120

Query: 121 EKTFPGMNVTLSKHHPDWTKYIATKLITTAQVLIIMIVMAGNHIFLYLKMSAAPSWYHPL 180
            + FPG+NVTLS H PD TKY+ TK I+TAQVLII+IVMAG +I   ++M   P WYH L
Sbjct: 121 LENFPGINVTLSHHPPDLTKYLTTKFISTAQVLIIIIVMAGGYILAEMRM-PIPPWYHRL 180

Query: 181 DAHKFAASAIPWLLGCIAINYLQNTEPFLVFLNDELMFSKQLVGRFPGATEMKEIIRSRL 224
            AHKF   AIPWLLG IAINYLQNTEPF V+ NDEL+F K   GRFPG TEMKE+IRSRL
Sbjct: 181 AAHKFFVIAIPWLLGSIAINYLQNTEPFEVYFNDELVFCKLQAGRFPGVTEMKELIRSRL 231

[Close]

BLAST of Sed0020125 vs. ExPASy TrEMBL
Match: M5WCM6 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G055700 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.4e-26
Identity = 78/221 (35.29%), Postives = 117/221 (52.94%), Query Frame = 0


Query: 1   MDRRNSVLALLSLSVLCLDIYDFFSTHPPPISSNSVVFQNHSNSNHLNHTVSRILNQTQM 60
           MDR   +L  L L + C D+ + F+  PPP         +H +  H    V++     + 
Sbjct: 1   MDRTQILLLGLPLFLFCTDLLNLFAPPPPPPHKPPHHHHHHHHLQHQPSPVAKDFPSQKP 60

Query: 61  SSSNQTYNDTIRIEFASLTSYRVHFISLNVLRATMSVKDLAEKTFPGMNVTLSKHHPDWT 120
           S+       T++I F +  SY+ +          +++  + E +FPG++V LS H P   
Sbjct: 61  SAVGLGAGSTVKISFCTSCSYKGN---------ALTITKMLESSFPGIHVVLSNHPPPLP 120

Query: 121 KYIATKLITTAQVLIIMIVMAGNHIFLYLKMSAAPSWYHPLDAHKFAASAIPWLLGCIAI 180
           K + +KL+  AQV +  IVMAG HIF  L +   P WY+ L A++F   A  WLLG    
Sbjct: 121 KRVLSKLVPVAQVGVFGIVMAGEHIFPMLGIMTPPPWYYSLRANRFGTIASTWLLGNALQ 180

Query: 181 NYLQNTEPFLVFLNDELMFSKQLVGRFPGATEMKEIIRSRL 222
           ++LQ T  F VFLNDEL+FSK   GRFPG  E+++ I ++L
Sbjct: 181 SFLQGTGAFEVFLNDELVFSKLKEGRFPGEIELRDDIAAKL 212

[Close]

BLAST of Sed0020125 vs. ExPASy TrEMBL
Match: A0A5E4ELK7 (PREDICTED: selT OS=Prunus dulcis OX=3755 GN=ALMOND_2B012852 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.4e-26
Identity = 78/221 (35.29%), Postives = 117/221 (52.94%), Query Frame = 0


Query: 1   MDRRNSVLALLSLSVLCLDIYDFFSTHPPPISSNSVVFQNHSNSNHLNHTVSRILNQTQM 60
           MDR   +L  L L + C D+ + F+  PPP         +H +  H    V++     + 
Sbjct: 1   MDRTQILLLGLPLFLFCTDLLNLFAPPPPPPHKPPHHHHHHHHLQHQPSPVAKDFPSQKP 60

Query: 61  SSSNQTYNDTIRIEFASLTSYRVHFISLNVLRATMSVKDLAEKTFPGMNVTLSKHHPDWT 120
           S+       T++I F +  SY+ +          +++  + E +FPG++V LS H P   
Sbjct: 61  SAVGLGAGSTVKISFCTSCSYKGN---------ALTITKMLESSFPGIHVVLSNHPPPLP 120

Query: 121 KYIATKLITTAQVLIIMIVMAGNHIFLYLKMSAAPSWYHPLDAHKFAASAIPWLLGCIAI 180
           K + +KL+  AQV +  IVMAG HIF  L +   P WY+ L A++F   A  WLLG    
Sbjct: 121 KRVLSKLVPVAQVGVFGIVMAGEHIFPMLGIMTPPPWYYSLRANRFGTIASTWLLGNALQ 180

Query: 181 NYLQNTEPFLVFLNDELMFSKQLVGRFPGATEMKEIIRSRL 222
           ++LQ T  F VFLNDEL+FSK   GRFPG  E+++ I ++L
Sbjct: 181 SFLQGTGAFEVFLNDELVFSKLKEGRFPGEIELRDDIAAKL 212

[Close]

BLAST of Sed0020125 vs. ExPASy TrEMBL
Match: A0A4Y1RK70 (SELT-like protein OS=Prunus dulcis OX=3755 GN=Prudu_015834 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.4e-26
Identity = 78/221 (35.29%), Postives = 117/221 (52.94%), Query Frame = 0


Query: 1   MDRRNSVLALLSLSVLCLDIYDFFSTHPPPISSNSVVFQNHSNSNHLNHTVSRILNQTQM 60
           MDR   +L  L L + C D+ + F+  PPP         +H +  H    V++     + 
Sbjct: 4   MDRTQILLLGLPLFLFCTDLLNLFAPPPPPPHKPPHHHHHHHHLQHQPSPVAKDFPSQKP 63

Query: 61  SSSNQTYNDTIRIEFASLTSYRVHFISLNVLRATMSVKDLAEKTFPGMNVTLSKHHPDWT 120
           S+       T++I F +  SY+ +          +++  + E +FPG++V LS H P   
Sbjct: 64  SAVGLGAGSTVKISFCTSCSYKGN---------ALTITKMLESSFPGIHVVLSNHPPPLP 123

Query: 121 KYIATKLITTAQVLIIMIVMAGNHIFLYLKMSAAPSWYHPLDAHKFAASAIPWLLGCIAI 180
           K + +KL+  AQV +  IVMAG HIF  L +   P WY+ L A++F   A  WLLG    
Sbjct: 124 KRVLSKLVPVAQVGVFGIVMAGEHIFPMLGIMTPPPWYYSLRANRFGTIASTWLLGNALQ 183

Query: 181 NYLQNTEPFLVFLNDELMFSKQLVGRFPGATEMKEIIRSRL 222
           ++LQ T  F VFLNDEL+FSK   GRFPG  E+++ I ++L
Sbjct: 184 SFLQGTGAFEVFLNDELVFSKLKEGRFPGEIELRDDIAAKL 215

[Close]

BLAST of Sed0020125 vs. ExPASy TrEMBL
Match: A0A6J5XJN1 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS35639 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 5.4e-26
Identity = 80/227 (35.24%), Postives = 120/227 (52.86%), Query Frame = 0


Query: 1   MDRRNSVLALLSLSVLCLDIYDFFSTHPPPISSNSVVFQNHSNSNHLNHTVSRILNQT-- 60
           MDR   +L  L L + C D+ + F+  PPP         +H + +HL H  S +  +   
Sbjct: 1   MDRAQILLLGLPLFLFCTDLLNLFAPSPPPPHKPP---HHHHHHHHLQHQPSPVAKENLD 60

Query: 61  ----QMSSSNQTYNDTIRIEFASLTSYRVHFISLNVLRATMSVKDLAEKTFPGMNVTLSK 120
               + S+       T++I F +  SY+ +          +++  + E +FPG++V LS 
Sbjct: 61  FPSQKPSAVGLGAGSTVKISFCTSCSYKGN---------AVTITKMLESSFPGIHVVLSN 120

Query: 121 HHPDWTKYIATKLITTAQVLIIMIVMAGNHIFLYLKMSAAPSWYHPLDAHKFAASAIPWL 180
           H P   K + +KL+  AQV +  IVMAG HIF  L +   P WY+ L A++F   A  WL
Sbjct: 121 HPPPLPKRVLSKLVPVAQVGVFGIVMAGEHIFPMLGIMTPPPWYYSLRANRFGTIASTWL 180

Query: 181 LGCIAINYLQNTEPFLVFLNDELMFSKQLVGRFPGATEMKEIIRSRL 222
           LG    ++LQ T  F VFLNDEL+FSK   GRFPG  E+++ I ++L
Sbjct: 181 LGNALQSFLQGTGAFEVFLNDELVFSKLKEGRFPGEIELRDDIAAKL 215

[Close]

BLAST of Sed0020125 vs. TAIR 10
Match: AT3G47300.1 (SELT-like protein precursor )

HSP 1 Score: 111.7 bits (278), Expect = 7.7e-25
Identity = 72/217 (33.18%), Postives = 115/217 (53.00%), Query Frame = 0


Query: 1   MDRRNSVLALLSLSVLCLDIYDFFSTHPPPISSNSVVFQNHSNSNHLNHTVSRILNQTQM 60
           MD+   +L  L + +LC D+++ F T PPP S      Q+ S       ++S  L+    
Sbjct: 1   MDKTQLILLGLPIFLLCSDLFNLF-TPPPPKS------QHQSPP-----SISETLDFPAQ 60

Query: 61  SSSNQTYNDTIRIEFASLTSYRVHFISLNVLRATMSVKDLAEKTFPGMNVTLSKHHPDWT 120
            S+   Y +T+ I F    SY+            +S+K + E  FPG++V L+ +     
Sbjct: 61  KSTGVGYGNTVEINFCISCSYK---------GTAVSMKKMLESVFPGLDVVLANYPAPAP 120

Query: 121 KYIATKLITTAQVLIIMIVMAGNHIFLYLKMSAAPSWYHPLDAHKFAASAIPWLLGCIAI 180
           K I  K++  AQV +I ++M G  IF  + ++  P+WYH L A++F + A  WLLG    
Sbjct: 121 KRILAKVVPVAQVGVIGLIMGGEQIFPMIGIAQPPAWYHSLRANRFGSMASTWLLGNFLQ 180

Query: 181 NYLQNTEPFLVFLNDELMFSKQLVGRFPGATEMKEII 218
           ++LQ++  F V  N EL+FSK   GRFPG  E++++I
Sbjct: 181 SFLQSSGAFEVSCNGELVFSKLKEGRFPGEIELRDLI 196

[Close]

BLAST of Sed0020125 vs. TAIR 10
Match: AT5G58640.2 (Selenoprotein, Rdx type )

HSP 1 Score: 99.0 bits (245), Expect = 5.2e-21
Identity = 65/225 (28.89%), Postives = 112/225 (49.78%), Query Frame = 0


Query: 1   MDRRNSVLALLSLSVLCLDIYDFFSTHPPPISSNSVVFQNHSNSNHL-NHTVSRIL---N 60
           MDR   +L  L + + C D+++ F+  PP    +      H    H  N  +   L   +
Sbjct: 1   MDRAQLILLGLPIFLFCSDLFNLFTPPPPKPQPHRPHQPPHIPHQHRPNAIIPETLDFPS 60

Query: 61  QTQMSSSNQTYNDTIRIEFASLTSYRVHFISLNVLRATMSVKDLAEKTFPGMNVTLSKHH 120
           QT        Y +T+ I F    SY+            +++K + E  FPG++V L+ + 
Sbjct: 61  QTSGLGGAIGYGNTVEINFCVSCSYK---------GTAVTMKKMLETAFPGLDVILANYP 120

Query: 121 PDWTKYIATKLITTAQVLIIMIVMAGNHIFLYLKMSAAPSWYHPLDAHKFAASAIPWLLG 180
           P   K +  K++   Q+ +I +++AG+ I   + ++  P+W+H L A++F + A  WL+G
Sbjct: 121 PPAPKRLLAKVVPVVQMGVIGMIVAGDRILPMIGITNPPAWFHSLRANRFGSMASTWLIG 180

Query: 181 CIAINYLQNTEPFLVFLNDELMFSKQLVGRFPGATEMKEIIRSRL 222
               +YLQ++  F V  N E +FSK   GRFPG  E++++I   L
Sbjct: 181 NFLQSYLQSSGAFEVHCNGEPVFSKLKEGRFPGEIELRDLISKTL 216

[Close]

BLAST of Sed0020125 vs. TAIR 10
Match: AT5G58640.1 (Selenoprotein, Rdx type )

HSP 1 Score: 98.6 bits (244), Expect = 6.7e-21
Identity = 64/227 (28.19%), Postives = 114/227 (50.22%), Query Frame = 0


Query: 1   MDRRNSVLALLSLSVLCLDIYDFFSTHPP------PISSNSVVFQNHSNSNHLNHTVSRI 60
           MDR   +L  L + + C D+++ F+  PP      P     +  Q+  N+  +  T+   
Sbjct: 1   MDRAQLILLGLPIFLFCSDLFNLFTPPPPKPQPHRPHQPPHIPHQHRPNA-IIPETLDFP 60

Query: 61  LNQTQMSSSNQTYNDTIRIEFASLTSYRVHFISLNVLRATMSVKDLAEKTFPGMNVTLSK 120
             +T        Y +T+ I F    SY+            +++K + E  FPG++V L+ 
Sbjct: 61  SQKTSGLGGAIGYGNTVEINFCVSCSYK---------GTAVTMKKMLETAFPGLDVILAN 120

Query: 121 HHPDWTKYIATKLITTAQVLIIMIVMAGNHIFLYLKMSAAPSWYHPLDAHKFAASAIPWL 180
           + P   K +  K++   Q+ +I +++AG+ I   + ++  P+W+H L A++F + A  WL
Sbjct: 121 YPPPAPKRLLAKVVPVVQMGVIGMIVAGDRILPMIGITNPPAWFHSLRANRFGSMASTWL 180

Query: 181 LGCIAINYLQNTEPFLVFLNDELMFSKQLVGRFPGATEMKEIIRSRL 222
           +G    +YLQ++  F V  N E +FSK   GRFPG  E++++I   L
Sbjct: 181 IGNFLQSYLQSSGAFEVHCNGEPVFSKLKEGRFPGEIELRDLISKTL 217

The following BLAST results are available for this feature:

BLAST of Sed0020125 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148433.1	4.6e-56	56.61	selT-like protein [Momordica charantia]	[more]
BBH04639.1	5.0e-26	35.29	SELT-like protein precursor [Prunus dulcis]	[more]
XP_007205839.1	5.0e-26	35.29	selT-like protein [Prunus persica] >XP_034219953.1 selT-like protein [Prunus dul...	[more]
CAB4282259.1	1.1e-25	35.24	unnamed protein product [Prunus armeniaca] >CAB4312667.1 unnamed protein product...	[more]
CAA2980256.1	1.9e-25	35.22	Hypothetical predicted protein [Olea europaea subsp. europaea]	[more]

BLAST of Sed0020125 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9STZ2	1.1e-23	33.18	SelT-like protein OS=Arabidopsis thaliana OX=3702 GN=At3g47300 PE=2 SV=2	[more]

BLAST of Sed0020125 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D431	2.2e-56	56.61	selT-like protein OS=Momordica charantia OX=3673 GN=LOC111017081 PE=4 SV=1	[more]
M5WCM6	2.4e-26	35.29	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G055700 PE=4 SV=1	[more]
A0A5E4ELK7	2.4e-26	35.29	PREDICTED: selT OS=Prunus dulcis OX=3755 GN=ALMOND_2B012852 PE=4 SV=1	[more]
A0A4Y1RK70	2.4e-26	35.29	SELT-like protein OS=Prunus dulcis OX=3755 GN=Prudu_015834 PE=4 SV=1	[more]
A0A6J5XJN1	5.4e-26	35.24	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS35639 PE=4 S...	[more]

BLAST of Sed0020125 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47300.1	7.7e-25	33.18	SELT-like protein precursor	[more]
AT5G58640.2	5.2e-21	28.89	Selenoprotein, Rdx type	[more]
AT5G58640.1	6.7e-21	28.19	Selenoprotein, Rdx type	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR13544:SF12	SELT-LIKE PROTEIN	coord: 1..222
IPR019389	Selenoprotein T	PANTHER	PTHR13544	SELENOPROTEIN T	coord: 1..222

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0020125.1	Sed0020125.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane