Sed0020096 (gene) Chayote v1

Overview


Name	Sed0020096
Type	gene
Organism	Sechium edule (Chayote v1)
Description	RNA helicase
Location	LG05: 4131487 .. 4137178 (-)
RNA-Seq Expression	Sed0020096
Synteny	Sed0020096

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTGTTATTCCCATTCGCTATAAACCCTAGCCGCCTTCACAATTCTCCTTCCTTCCCTTTTGTATTTGTTCTTCGTTTTCAATTCCAAACCCTAGCCGCCGCCGATTCCTGTTCTTCCTCCGATTCTCCGATCACCGTTCCTGAACCGTTCCGAACAGAGTCCGATCTCAGTTCGGCATCGGTTTAGGCACCGAAGCTTTTGCAGATTCATCCATTTTCTCGCCCTGAAATGTCGACCGAGAAGAAGGAGAAGAAGATGAAAATCAAAGCCGTTGTGGAAGCCCTAGAATCTGAGGAGTTGGTTCTTTCCGACAAGAAGAAGAAGAAGAGTAAGGGTGAGAAGGAGAGTAAGAAACGAAAGGCTGTGGAGGTGGCGGACGACGAGGTTCGGAGTGAGACCAGCTCGGAGCTCGGCGAGCCGGTGAATTCGAGGCTGGAGAGCGGGAAGGTGAAGAAGAGCTCGAAGAAGGCTAAGGTGGTCGAGTCTGATGAAGATGAGGTCGAGAAGGAGGTCGAGAATCCGAATTCTGTGGTGAATTTTCGGATTTCGGAACCGTTGAAGGAGCGGTTGAAGGAGAAGGGTATCATGGCGTTGTTTCCGATTCAGGCGATGACGTTTGAGATCTTGTTTGATGGGTCTGATCTGGTTGGACGAGCCAGAACTGGACAGGTATAATTGGTTTGGTTGATTGTCTATGATTCTTTTTATTGATAATTTAGGTCTTGATTATTTTTTTTTAGTTTTTGGTTTCTGAAATTTAAGCTTACAACAATTACTTTACCCTAGGTTTGTTGGGAACAAAAAAAAGTACCTTCCAAAACCTTGTTTTTGCATTTGAATTTAGTTAACACTTACCTACGTTTGGAAAGATAAATACATTGTTGGAATTGGAAAGGTGGAGAACATTGTATAAGCCTAAATATCACAAATGAAAATAAAAAAACCAAATGGTTATAAAATGGGGCCTTAATGTTGTGGTTTCCTCTACAATATGAAGCATGAAATTGGTATAATTAGGATTCAGAACAGCAGTTGAAACAGACCAGAAATTTTATTGATGGACTTTGATTTTTCTGTTGTAAACATTATTCTATGTTCTCAATTGCATTTGTGTTTTCAGGCTTAGGGTGCAGCTATTTAACTAGTTGTGGCTTAGTAGTTTTGGGCCATTCAACGTAGTGTTTAGATATTTATTTATAATCTTTTTTTTTTAAAAAAATTTCGTATGTTTTCTCACAACAACATTTTTCTCTATGTGACCATCAGAACATTAACTTCAAGGTTGGATTAGAGATATATTAAACGTTGCATTGCACAATTAACTTTTTCTTGTTTAAATTATATATGTATAATCTCTATAACCTTTGTGCAGGGTAAAACATTAGCTTTTGTCTTGCCCATTTTGGAGTCTTTAATAAATGGACCTGCTAAATCATCGCGAGTGACTGGATATGGACGTTCACCTAGTGTTATAGCTCTTTTACCTACTAGGGAATTGGCTGACCAGGTATGATTTGGAGATTTTACTTCACCCACAAGTTCCATTTTGGTTTTTGTATGTTGAGATTTTGTGCTTTGATTAGGTGTTCGAGGACTTCCAATTTTACGGTCAAGCCTTAGGGTTGGATTCTTGCTGTTTATGTGGAGGAATGCCTTATGGGCCCCAAGAAAATAAATTACGAAGGGGGGTTGATATAGTCATTGGGACTCCTGGTCGTATAAAGGTGGAAATTTAAAGTAATTTTTGTATGTTGTTAAATGATGTAAAACATTAGCCTTTGTTTACTCACTCATGCCTTCTTTAATGTTTTGTAGGATCACATTAACAGAAATAATATTGATTTGCGGACTCTGAAGTTTAGAATTCTTGATGAAGCTGATGAAATGTTGAGGATGGGTTTTGTTGAAGATGTTGAATTTATTCTTGGTATAGTATTTTGAAATCTTAATTTTTTGATTCATTGCAATTTTAATTCTACATGGCTTCATTTCTTTATATGTTGCCATTTTCGTTACCTGACGTTTGCTTATTTTGTATGGTGGATTTTTGTAGGCAAGGTGGCGGATGTGAACAAAGTTCAAACACTTCTTTTCAGTGCTACTTTACCTGACTGGGTGAAAAATGTTAGTATTCCTAAAACAGTATATAGTTATAAAGCTCCTTGTAAGCTGCAACTGTTATTGATAAATTGTTTTGCTTTATTAGATTTCTTCGAGGTTCCTTAAAGCTGACAAGAAAACTGTAGATCTTGTTGGTAATGAGAGAATGAAAGCCAGTAAGGATGTTAGGCATATTGTTATTCCTTGCTCTGATTCAGAAAGGTCCCGTCTTATTCCTGATATCATTCAATGCTATAGCAGGTTAGCGGTTTCCGCAGAAATAAATTGCTTATCATTGTTATTAATGTTCTTCAGTGATAGGTTTATTATTCAACTGTTCCGTTCATTAATGCTGTATGCTGACATTTTCTCAGTGGAGGCCAAACTATTATATTTACAGAGAGAAAGGAATCTGCTTCAGAGCTTGCTGGTCTTTTACCAGGAGCTCGAGCGTTACATGGTGATATACAGCAGACTCAACGTCAGGTGATTTTTTTTATAAACATTTGTTGCCTTTTCAGGATTGGTCGTGTATGGCCTTCTCTAAACCTGTTGTTTATTTACTCAAGTCTGTTTGTCTACTATTATATTTACTCAGTCTCTAAACCTGGTGTAGTCTTGTCTTACTTCTTGTTGGATGTTTTTGTAATGCAATGATCTATAAGACTGTTTATCCTTTTTTATTTTTGAAAGGGCTGTTTATCTATTTTTGTTACATTTAGAAGTTTTATGTTTTAATATAATTTAATGTTTATCTCATTTCATTCGTTCAACATTGTTTATTTGATTGTGAAGTATATATACTCTTCCTAATCATTTCTGCGTGGCGTACTTGCTGCAGGTTACCATTTCTGCGTTCAAGTCAGCCAAGTTTCAGGTATTAGTAGCTACTAATGTGGCAGCACGAGGGTTGGATATTGATAATGTTCAGTTAGTTATCCAGGTTTGTGTTTAACGCTTATATTTAATGTGATATTTTTGATTCATACTCTGCTATTTTTCTATTATAATTTGTTAATGCTATATTTTTCTTTGACTATGAATCTTCCAGTGTGAGGCTCCCAAGGACACAGAATCATATATCCATCGCTCTGGAAGAACAGGAAGAGCTGGTACATAAGTTTGGCACTTTTCTGCGATGTTCTTGCATATAAATTTGAGCTTTCTAACAAGACTAAATTTTTTAGGCAATACCGGAGTAGCCGTGACATTGTATGAGCCAAGAAAGTCGGGGAGCATTTTCAGAATAGAACGGGAGGCTGGGGTGAAGTTTGAGCACTTGTCTGCACCCCAGCCTGTTGATATAGCCAAATCCGCTGGAGCTAGTGCTGCTGAATCTGTTACTCAAGTCTCAGATACTGTAATCCCACCCTTCATGTCTGCTGCGGAAGAGTTGGTGAAAAACTCCGGTTTGTCTGCTCTGGAGATAATTGCCAAGTCCCTTGCCAAGATTTCTGTGAGTTGTCTTTTCTCTAGCTATGTATTCGATTGCGTTTCTTCTTTATTTACATTCACATTTACGTTTACCTTATTGCATTTTGGTGGTTGAATGTATTTCTGTAGGGTTATACGGAGATAAAGAGCAGATCACTTTTAACATCCACAGAAGATCATGTTACTCTAATGCTTGGAGCTGGGAAGCCCATCTATTCCCCATCGTAAGAAATCTAGATTTTAGCTTAGCTTATTTGTTTGACCATTTTTTGCACATTTGTTCTTACACTTGATCATCAATTTGATAATTTTTTTGACGATTCAATGACGTCTTCTGCAATGCCCTTCTTTTGGTTTAGCCCATAGGTCTTTATTTTTGTGAAAAGAATATTTTTGTTTGTAGTTAAGAGAAAAAATTGCCTCCTTATGGCTAAGGAGGCAAGTCCTTCTTAACGGGCGTATGGTGCCACAAAGTTTTCCTTATTTTAAAATTAGGATTCTTTAAATAAAAATTTGTGGTACCAAACAGTGCCACATATCCCACTAAGGAGAGCTTGCCTCCTTAGCCATAAGGAGGTAAGTTTTTCTCTATAGTTAATGTAATCTTTAGGTAATTAACGTGTTAAATATCTGAGCATGCATATATATGGTTAGAATGATAAATTCTTTGTATTGCATATAGAATAGCATTGGTTTCCGTTCTCATCTAATGAATTTTGGTTCTTAAATTGTCCAGGTTTGCCTACAGTGTCTTGAGAAGGTTCTTGCCCGAGGAGAAAGTTGAGTCGGTCAAGGGTATGACACTGACGGCTGATGGATACAGTGCTGTGTTTGATGTCCGAACAGAAGATTTAGATGCATTCCTTGCTGGTAATTTTTTTTTATTCGTAACTTGTTTCCGAATACTAGTTTTCGTTATCGTACTTGCAGGAATTTGTCCGATGGGGAAAAAATTGCTATTTCCCTTTCTCCTCTATGTTTTAAATAGTTGCTATTTGAGGCTTGTCGCATATATGCTTATGCCTCTATAAAAGAATGTTTGATGCTTTAACATTTTGATTCAACGGTTACTACTTATACTATTACCGCTTGAAAACATTGAAACAAATTTATACAAATACTTGATTTCAGTAGCTGATAATATTAGTGATCTTAAAAGTGGGCCTTGAGGCCTAAGGTAATGGGTTCACTGGTCATCTACCTAGGAATTAATTTCCTACTGGTTCCGTGCAAGTTGACACGGACAGCCACGGATATAAAAAAACAGTGATCTTAAAGATATTATATTAAATATTTCCTATTTACACCAATTAGAGATTGTAAGGTATATTTGTTTTGTTAATATTGTGACGTTCGCCCTATATTTACACAAGGCTTAGGCCCTCACCCTTCAAAGGAAAATGGTGTGGCCTTAGCCTTTTAAAATCAGAATATGACTATAGTCTTCTCTCTTTTCATCTACTATAAATTAATTTTTTTGTCTGTATTTTTATCATCATCTTCATTATTATTATTTTGGAATTAGTGTTTGTAATGATACTGTTTGAATGAAAACTCATTTGGTACGTAGATTTTTCTTCAGATCCTGATGTTATTTTGTGCAGGTCAAGGAAATGTAGCGGATGTGAATCTGGGGGTGATAAAAACCCTTCCAAAATTACAACAAAGAGAGCAATCGCGAGGTGGAAGATTCAGTGGTGGTCGTGGAGGATTTGGCGATCGCAGATTTGGTGGTGGTGGTGGTAGTAGGTTTTCAGGAGGACGAGGAGGTAGCCGCGGAGGATACAACCGGTTTTCGGGCAATTCAGGCGGGAGAGGTCGAAACTTCAGTGGAGGTAACAGTCGGTAAGGCGGCGTGTTCCTAATAAACCAGAAGTGTGAATTGTTGGGAGCATTGGAAATTTTGTCGAAATGTTGAGTTTTTCTCCTAGAAAAGATGAGATGAGTATTAGTAATTATAATACTGTCGCGTGAGGCTAATGCTCGGCGATTGCAGGTACTAATCTTTCTGTTTAATTTGATATTTTTCTTGTTGTTTATTCCTCCAATGATGTATTTTGATTTTTTTGTTGGCTTCGAGAGACATTATTTAAGAATTTGCGAAGAGGATTTTTGTATTATTTTATTTATATGTTAAAACTTTATACTTATTGCAG

mRNA sequence

CTTTGTTATTCCCATTCGCTATAAACCCTAGCCGCCTTCACAATTCTCCTTCCTTCCCTTTTGTATTTGTTCTTCGTTTTCAATTCCAAACCCTAGCCGCCGCCGATTCCTGTTCTTCCTCCGATTCTCCGATCACCGTTCCTGAACCGTTCCGAACAGAGTCCGATCTCAGTTCGGCATCGGTTTAGGCACCGAAGCTTTTGCAGATTCATCCATTTTCTCGCCCTGAAATGTCGACCGAGAAGAAGGAGAAGAAGATGAAAATCAAAGCCGTTGTGGAAGCCCTAGAATCTGAGGAGTTGGTTCTTTCCGACAAGAAGAAGAAGAAGAGTAAGGGTGAGAAGGAGAGTAAGAAACGAAAGGCTGTGGAGGTGGCGGACGACGAGGTTCGGAGTGAGACCAGCTCGGAGCTCGGCGAGCCGGTGAATTCGAGGCTGGAGAGCGGGAAGGTGAAGAAGAGCTCGAAGAAGGCTAAGGTGGTCGAGTCTGATGAAGATGAGGTCGAGAAGGAGGTCGAGAATCCGAATTCTGTGGTGAATTTTCGGATTTCGGAACCGTTGAAGGAGCGGTTGAAGGAGAAGGGTATCATGGCGTTGTTTCCGATTCAGGCGATGACGTTTGAGATCTTGTTTGATGGGTCTGATCTGGTTGGACGAGCCAGAACTGGACAGGGTAAAACATTAGCTTTTGTCTTGCCCATTTTGGAGTCTTTAATAAATGGACCTGCTAAATCATCGCGAGTGACTGGATATGGACGTTCACCTAGTGTTATAGCTCTTTTACCTACTAGGGAATTGGCTGACCAGGTGTTCGAGGACTTCCAATTTTACGGTCAAGCCTTAGGGTTGGATTCTTGCTGTTTATGTGGAGGAATGCCTTATGGGCCCCAAGAAAATAAATTACGAAGGGGGGTTGATATAGTCATTGGGACTCCTGGTCGTATAAAGGATCACATTAACAGAAATAATATTGATTTGCGGACTCTGAAGTTTAGAATTCTTGATGAAGCTGATGAAATGTTGAGGATGGGTTTTGTTGAAGATGTTGAATTTATTCTTGGCAAGGTGGCGGATGTGAACAAAGTTCAAACACTTCTTTTCAGTGCTACTTTACCTGACTGGGTGAAAAATATTTCTTCGAGGTTCCTTAAAGCTGACAAGAAAACTGTAGATCTTGTTGGTAATGAGAGAATGAAAGCCAGTAAGGATGTTAGGCATATTGTTATTCCTTGCTCTGATTCAGAAAGGTCCCGTCTTATTCCTGATATCATTCAATGCTATAGCAGTGGAGGCCAAACTATTATATTTACAGAGAGAAAGGAATCTGCTTCAGAGCTTGCTGGTCTTTTACCAGGAGCTCGAGCGTTACATGGTGATATACAGCAGACTCAACGTCAGGTTACCATTTCTGCGTTCAAGTCAGCCAAGTTTCAGGTATTAGTAGCTACTAATGTGGCAGCACGAGGGTTGGATATTGATAATGTTCAGTTAGTTATCCAGTGTGAGGCTCCCAAGGACACAGAATCATATATCCATCGCTCTGGAAGAACAGGAAGAGCTGGCAATACCGGAGTAGCCGTGACATTGTATGAGCCAAGAAAGTCGGGGAGCATTTTCAGAATAGAACGGGAGGCTGGGGTGAAGTTTGAGCACTTGTCTGCACCCCAGCCTGTTGATATAGCCAAATCCGCTGGAGCTAGTGCTGCTGAATCTGTTACTCAAGTCTCAGATACTGTAATCCCACCCTTCATGTCTGCTGCGGAAGAGTTGGTGAAAAACTCCGGTTTGTCTGCTCTGGAGATAATTGCCAAGTCCCTTGCCAAGATTTCTGGTTATACGGAGATAAAGAGCAGATCACTTTTAACATCCACAGAAGATCATGTTACTCTAATGCTTGGAGCTGGGAAGCCCATCTATTCCCCATCGTTTGCCTACAGTGTCTTGAGAAGGTTCTTGCCCGAGGAGAAAGTTGAGTCGGTCAAGGGTATGACACTGACGGCTGATGGATACAGTGCTGTGTTTGATGTCCGAACAGAAGATTTAGATGCATTCCTTGCTGGTCAAGGAAATGTAGCGGATGTGAATCTGGGGGTGATAAAAACCCTTCCAAAATTACAACAAAGAGAGCAATCGCGAGGTGGAAGATTCAGTGGTGGTCGTGGAGGATTTGGCGATCGCAGATTTGGTGGTGGTGGTGGTAGTAGGTTTTCAGGAGGACGAGGAGGTAGCCGCGGAGGATACAACCGGTTTTCGGGCAATTCAGGCGGGAGAGGTCGAAACTTCAGTGGAGGTAACAGTCGGTAAGGCGGCGTGTTCCTAATAAACCAGAAGTGTGAATTGTTGGGAGCATTGGAAATTTTGTCGAAATGTTGAGTTTTTCTCCTAGAAAAGATGAGATGAGTATTAGTAATTATAATACTGTCGCGTGAGGCTAATGCTCGGCGATTGCAGGTACTAATCTTTCTGTTTAATTTGATATTTTTCTTGTTGTTTATTCCTCCAATGATGTATTTTGATTTTTTTGTTGGCTTCGAGAGACATTATTTAAGAATTTGCGAAGAGGATTTTTGTATTATTTTATTTATATGTTAAAACTTTATACTTATTGCAG

Coding sequence (CDS)

ATGTCGACCGAGAAGAAGGAGAAGAAGATGAAAATCAAAGCCGTTGTGGAAGCCCTAGAATCTGAGGAGTTGGTTCTTTCCGACAAGAAGAAGAAGAAGAGTAAGGGTGAGAAGGAGAGTAAGAAACGAAAGGCTGTGGAGGTGGCGGACGACGAGGTTCGGAGTGAGACCAGCTCGGAGCTCGGCGAGCCGGTGAATTCGAGGCTGGAGAGCGGGAAGGTGAAGAAGAGCTCGAAGAAGGCTAAGGTGGTCGAGTCTGATGAAGATGAGGTCGAGAAGGAGGTCGAGAATCCGAATTCTGTGGTGAATTTTCGGATTTCGGAACCGTTGAAGGAGCGGTTGAAGGAGAAGGGTATCATGGCGTTGTTTCCGATTCAGGCGATGACGTTTGAGATCTTGTTTGATGGGTCTGATCTGGTTGGACGAGCCAGAACTGGACAGGGTAAAACATTAGCTTTTGTCTTGCCCATTTTGGAGTCTTTAATAAATGGACCTGCTAAATCATCGCGAGTGACTGGATATGGACGTTCACCTAGTGTTATAGCTCTTTTACCTACTAGGGAATTGGCTGACCAGGTGTTCGAGGACTTCCAATTTTACGGTCAAGCCTTAGGGTTGGATTCTTGCTGTTTATGTGGAGGAATGCCTTATGGGCCCCAAGAAAATAAATTACGAAGGGGGGTTGATATAGTCATTGGGACTCCTGGTCGTATAAAGGATCACATTAACAGAAATAATATTGATTTGCGGACTCTGAAGTTTAGAATTCTTGATGAAGCTGATGAAATGTTGAGGATGGGTTTTGTTGAAGATGTTGAATTTATTCTTGGCAAGGTGGCGGATGTGAACAAAGTTCAAACACTTCTTTTCAGTGCTACTTTACCTGACTGGGTGAAAAATATTTCTTCGAGGTTCCTTAAAGCTGACAAGAAAACTGTAGATCTTGTTGGTAATGAGAGAATGAAAGCCAGTAAGGATGTTAGGCATATTGTTATTCCTTGCTCTGATTCAGAAAGGTCCCGTCTTATTCCTGATATCATTCAATGCTATAGCAGTGGAGGCCAAACTATTATATTTACAGAGAGAAAGGAATCTGCTTCAGAGCTTGCTGGTCTTTTACCAGGAGCTCGAGCGTTACATGGTGATATACAGCAGACTCAACGTCAGGTTACCATTTCTGCGTTCAAGTCAGCCAAGTTTCAGGTATTAGTAGCTACTAATGTGGCAGCACGAGGGTTGGATATTGATAATGTTCAGTTAGTTATCCAGTGTGAGGCTCCCAAGGACACAGAATCATATATCCATCGCTCTGGAAGAACAGGAAGAGCTGGCAATACCGGAGTAGCCGTGACATTGTATGAGCCAAGAAAGTCGGGGAGCATTTTCAGAATAGAACGGGAGGCTGGGGTGAAGTTTGAGCACTTGTCTGCACCCCAGCCTGTTGATATAGCCAAATCCGCTGGAGCTAGTGCTGCTGAATCTGTTACTCAAGTCTCAGATACTGTAATCCCACCCTTCATGTCTGCTGCGGAAGAGTTGGTGAAAAACTCCGGTTTGTCTGCTCTGGAGATAATTGCCAAGTCCCTTGCCAAGATTTCTGGTTATACGGAGATAAAGAGCAGATCACTTTTAACATCCACAGAAGATCATGTTACTCTAATGCTTGGAGCTGGGAAGCCCATCTATTCCCCATCGTTTGCCTACAGTGTCTTGAGAAGGTTCTTGCCCGAGGAGAAAGTTGAGTCGGTCAAGGGTATGACACTGACGGCTGATGGATACAGTGCTGTGTTTGATGTCCGAACAGAAGATTTAGATGCATTCCTTGCTGGTCAAGGAAATGTAGCGGATGTGAATCTGGGGGTGATAAAAACCCTTCCAAAATTACAACAAAGAGAGCAATCGCGAGGTGGAAGATTCAGTGGTGGTCGTGGAGGATTTGGCGATCGCAGATTTGGTGGTGGTGGTGGTAGTAGGTTTTCAGGAGGACGAGGAGGTAGCCGCGGAGGATACAACCGGTTTTCGGGCAATTCAGGCGGGAGAGGTCGAAACTTCAGTGGAGGTAACAGTCGGTAA

Protein sequence

MSTEKKEKKMKIKAVVEALESEELVLSDKKKKKSKGEKESKKRKAVEVADDEVRSETSSELGEPVNSRLESGKVKKSSKKAKVVESDEDEVEKEVENPNSVVNFRISEPLKERLKEKGIMALFPIQAMTFEILFDGSDLVGRARTGQGKTLAFVLPILESLINGPAKSSRVTGYGRSPSVIALLPTRELADQVFEDFQFYGQALGLDSCCLCGGMPYGPQENKLRRGVDIVIGTPGRIKDHINRNNIDLRTLKFRILDEADEMLRMGFVEDVEFILGKVADVNKVQTLLFSATLPDWVKNISSRFLKADKKTVDLVGNERMKASKDVRHIVIPCSDSERSRLIPDIIQCYSSGGQTIIFTERKESASELAGLLPGARALHGDIQQTQRQVTISAFKSAKFQVLVATNVAARGLDIDNVQLVIQCEAPKDTESYIHRSGRTGRAGNTGVAVTLYEPRKSGSIFRIEREAGVKFEHLSAPQPVDIAKSAGASAAESVTQVSDTVIPPFMSAAEELVKNSGLSALEIIAKSLAKISGYTEIKSRSLLTSTEDHVTLMLGAGKPIYSPSFAYSVLRRFLPEEKVESVKGMTLTADGYSAVFDVRTEDLDAFLAGQGNVADVNLGVIKTLPKLQQREQSRGGRFSGGRGGFGDRRFGGGGGSRFSGGRGGSRGGYNRFSGNSGGRGRNFSGGNSR

Homology

[Close]

BLAST of Sed0020096 vs. NCBI nr
Match: XP_008467258.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 7 [Cucumis melo])

HSP 1 Score: 1073.5 bits (2775), Expect = 5.3e-310
Identity = 575/700 (82.14%), Postives = 633/700 (90.43%), Query Frame = 0


Query: 4   EKKEKKMKIKAVVEALESEE--------LVLSDKKKKKSKGEKESKKRKAVEVADDEVRS 63
           +KKEKKMK KA+VEAL S +        L LSDKKKKKSK +KESKKRKAVEVADD  RS
Sbjct: 2   DKKEKKMKNKALVEALASNDVFEQNADGLDLSDKKKKKSKSDKESKKRKAVEVADDGDRS 61

Query: 64  ETSSELGEPVNSRLESGKVKKSSKKAKVVESDEDEVEKEVENPNSVVNFRISEPLKERLK 123
           ETSSELGEPVNSR +SGK KKSSKK KVV+S++D+VEKE ENPN+V  FRISEPLK +LK
Sbjct: 62  ETSSELGEPVNSRSKSGKEKKSSKKVKVVDSEDDDVEKEAENPNAVTRFRISEPLKAKLK 121

Query: 124 EKGIMALFPIQAMTFEILFDGSDLVGRARTGQGKTLAFVLPILESLINGPAKSSRVTGYG 183
           EKGI +LFPIQAMTF+ ++DGSDLVGRARTGQGKTLAFVLPILESL+NGP KSSRVTGYG
Sbjct: 122 EKGISSLFPIQAMTFDTVYDGSDLVGRARTGQGKTLAFVLPILESLVNGPFKSSRVTGYG 181

Query: 184 RSPSVIALLPTRELADQVFEDFQFYGQALGLDSCCLCGGMPYGPQENKLRRGVDIVIGTP 243
           RSPSVI LLPTRELADQVFEDF+FYG+ALGLDSCCLCGGM YGPQE  L+RGVDIV+GTP
Sbjct: 182 RSPSVIVLLPTRELADQVFEDFKFYGRALGLDSCCLCGGMQYGPQEIALKRGVDIVVGTP 241

Query: 244 GRIKDHINRNNIDLRTLKFRILDEADEMLRMGFVEDVEFILGKVADVNKVQTLLFSATLP 303
           GR+KDHINRNNIDLR+LKFR+LDEADEML MGFV+DVEFILGKVADVNKVQTLLFSATLP
Sbjct: 242 GRVKDHINRNNIDLRSLKFRVLDEADEMLNMGFVDDVEFILGKVADVNKVQTLLFSATLP 301

Query: 304 DWVKNISSRFLKADKKTVDLVGNERMKASKDVRHIVIPCSDSERSRLIPDIIQCYSSGGQ 363
           DWVKNI+SRFLKA KKTVDLVGNE+MKASKDVRHIVIPCSDSERS+LIPDII+CYSSGG+
Sbjct: 302 DWVKNITSRFLKASKKTVDLVGNEKMKASKDVRHIVIPCSDSERSQLIPDIIRCYSSGGR 361

Query: 364 TIIFTERKESASELAGLLPGARALHGDIQQTQRQVTISAFKSAKFQVLVATNVAARGLDI 423
           TIIFTE KESASELAGLLPGAR LHGDIQQ+QR VTIS F+S KF +LVATNVAARGLDI
Sbjct: 362 TIIFTETKESASELAGLLPGARPLHGDIQQSQRSVTISGFRSGKFLILVATNVAARGLDI 421

Query: 424 DNVQLVIQCEAPKDTESYIHRSGRTGRAGNTGVAVTLYEPRKSGSIFRIEREAGVKFEHL 483
           ++VQL+IQCEAPKD E+YIHRSGRTGRAGNTGVAVTLY+PRKSG I RIER++GVKFEHL
Sbjct: 422 NDVQLIIQCEAPKDIEAYIHRSGRTGRAGNTGVAVTLYDPRKSGRIARIERDSGVKFEHL 481

Query: 484 SAPQPVDIAKSAGASAAESVTQVSDTVIPPFMSAAEELVKNSGLSALEIIAKSLAKISGY 543
           SAPQP+DIAKSAGASAAESVTQVSD+VIPPF SAAEE+V +S LSA+E++AK+LAK+SGY
Sbjct: 482 SAPQPIDIAKSAGASAAESVTQVSDSVIPPFKSAAEEMVNSSSLSAVELLAKALAKLSGY 541

Query: 544 TEIKSRSLLTSTEDHVTLMLGAGKPIYSPSFAYSVLRRFLPEEKVESVKGMTLTADGYSA 603
           TEIKSRSLLTS E+HVTL+L  GKPIYSPSFAYS+LRRFLPEEKVESVKGM+LTADGYSA
Sbjct: 542 TEIKSRSLLTSMENHVTLILEPGKPIYSPSFAYSILRRFLPEEKVESVKGMSLTADGYSA 601

Query: 604 VFDVRTEDLDAFLAGQGNVADVNLGVIKTLPKLQQREQSRGGRF-SGGRGGFGDRRFGGG 663
           VFDV+TEDLDAFL GQ N ADV++ V+K+LPKLQ REQSRGGRF  GGRGGFGDRR    
Sbjct: 602 VFDVKTEDLDAFLTGQANAADVSIEVLKSLPKLQDREQSRGGRFGGGGRGGFGDRR---N 661

Query: 664 GGSRFSGGRGGSRGGY----NRFSGNSGGRGRNFSGGNSR 691
           GGSRFSGGRGG RGG+    NRF   SGGRGRNF GG SR
Sbjct: 662 GGSRFSGGRGGGRGGFSDRNNRF---SGGRGRNFGGGGSR 695

[Close]

BLAST of Sed0020096 vs. NCBI nr
Match: XP_023551208.1 (DEAD-box ATP-dependent RNA helicase 7-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1069.7 bits (2765), Expect = 1.1e-308
Identity = 572/697 (82.07%), Postives = 636/697 (91.25%), Query Frame = 0


Query: 4   EKKEKKMKIKAVVEALESE--------ELVLSDKKKKKSKGEKESKKRKAVEVADDEVRS 63
           +KKEKKMK KA+VEAL SE        ELVLSDKKKKKSKG+KESKKRKAVE ADD  RS
Sbjct: 2   DKKEKKMKNKALVEALPSEDAFEQKSDELVLSDKKKKKSKGDKESKKRKAVEEADDGDRS 61

Query: 64  ETSSELGEPVNSRLESGKVKKSSKKAKVVESDEDEVEKEVENPNSVVNFRISEPLKERLK 123
           ETSSELGEPVNSRL++GK KKSSKK+KVVESDED+VEKE ++PN+V  FRISEPL+ RLK
Sbjct: 62  ETSSELGEPVNSRLKNGKEKKSSKKSKVVESDEDDVEKEADDPNAVSKFRISEPLRARLK 121

Query: 124 EKGIMALFPIQAMTFEILFDGSDLVGRARTGQGKTLAFVLPILESLINGPAKSSRVTGYG 183
           EKGI +LFPIQAMTF+ ++DG DLVGRARTGQGKTLAFVLPILES++NGP+KSS+VTGYG
Sbjct: 122 EKGISSLFPIQAMTFDTVYDGFDLVGRARTGQGKTLAFVLPILESIVNGPSKSSKVTGYG 181

Query: 184 RSPSVIALLPTRELADQVFEDFQFYGQALGLDSCCLCGGMPYGPQENKLRRGVDIVIGTP 243
           R+PSVI LLPTRELADQVFEDF+FYG ALGL+SCCLCGGM YGPQENKLRRGVDIV+GTP
Sbjct: 182 RTPSVIVLLPTRELADQVFEDFKFYGHALGLESCCLCGGMLYGPQENKLRRGVDIVVGTP 241

Query: 244 GRIKDHINRNNIDLRTLKFRILDEADEMLRMGFVEDVEFILGKVADVNKVQTLLFSATLP 303
           GR+KDHINRNNIDLR+LKFR+LDEADEMLRMGFV+DVEFILGKV DVNKVQTLLFSATLP
Sbjct: 242 GRVKDHINRNNIDLRSLKFRVLDEADEMLRMGFVDDVEFILGKVEDVNKVQTLLFSATLP 301

Query: 304 DWVKNISSRFLKADKKTVDLVGNERMKASKDVRHIVIPCSDSERSRLIPDIIQCYSSGGQ 363
            WVK+I+SRFLKA+KKTVDLVGNE+MKAS DVRHIVIPCSDSERSRLIPDII+CYSSGG+
Sbjct: 302 SWVKDIASRFLKANKKTVDLVGNEKMKASNDVRHIVIPCSDSERSRLIPDIIRCYSSGGR 361

Query: 364 TIIFTERKESASELAGLLPGARALHGDIQQTQRQVTISAFKSAKFQVLVATNVAARGLDI 423
           TIIFTE KESASELAGLLP AR LHGDIQQ+QR VT+S F+S KF VLVATNVAARGLDI
Sbjct: 362 TIIFTETKESASELAGLLPEARPLHGDIQQSQRSVTLSGFRSGKFLVLVATNVAARGLDI 421

Query: 424 DNVQLVIQCEAPKDTESYIHRSGRTGRAGNTGVAVTLYEPRKSGSIFRIEREAGVKFEHL 483
           ++VQL+IQCEAPKD E+YIHRSGRTGRAGN+GVAVTLY+PRK+G I RIERE+GVKFEHL
Sbjct: 422 NDVQLIIQCEAPKDIEAYIHRSGRTGRAGNSGVAVTLYDPRKAGRIARIERESGVKFEHL 481

Query: 484 SAPQPVDIAKSAGASAAESVTQVSDTVIPPFMSAAEELVKNSGLSALEIIAKSLAKISGY 543
           SAPQP+DIA+SAGASAAESVTQV+D+VIPPF SAAEELV NS LS +E++AK+LAKISGY
Sbjct: 482 SAPQPIDIARSAGASAAESVTQVADSVIPPFKSAAEELVNNSSLSPVELLAKALAKISGY 541

Query: 544 TEIKSRSLLTSTEDHVTLMLGAGKPIYSPSFAYSVLRRFLPEEKVESVKGMTLTADGYSA 603
           TEIKSRSLLTS E+HVTL+L AGKPI+SPSFAYSVLRRFLPEEKVESVKGMTLTADGYSA
Sbjct: 542 TEIKSRSLLTSMENHVTLILEAGKPIFSPSFAYSVLRRFLPEEKVESVKGMTLTADGYSA 601

Query: 604 VFDVRTEDLDAFLAGQGNVADVNLGVIKTLPKLQQREQSRGGRFSGGR-GGFGDRRFGGG 663
           VFDV+TEDLDAFL GQGN   V L V+KTLPKLQ REQSRGGRF GGR GG+G  R GG 
Sbjct: 602 VFDVQTEDLDAFLTGQGNAGGVRLEVLKTLPKLQDREQSRGGRFGGGRGGGYGGGRGGGY 661

Query: 664 GGSRFSGGRGGSRGGY-NRFSGNSGGRGRNFSGGNSR 691
           GGSRFSGGRGG RGG+ +R +  SGGRGRNFSGG+++
Sbjct: 662 GGSRFSGGRGGGRGGFSDRRNSFSGGRGRNFSGGSNK 698

[Close]

BLAST of Sed0020096 vs. NCBI nr
Match: KAG6579664.1 (DEAD-box ATP-dependent RNA helicase 7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1067.4 bits (2759), Expect = 5.2e-308
Identity = 571/697 (81.92%), Postives = 636/697 (91.25%), Query Frame = 0


Query: 4   EKKEKKMKIKAVVEALESE--------ELVLSDKKKKKSKGEKESKKRKAVEVADDEVRS 63
           +KKEKKMK KA+VEAL SE        ELVLSDKKKKKSKG+KESKKRKAVE ADD  RS
Sbjct: 2   DKKEKKMKNKALVEALPSEDAFEQKSDELVLSDKKKKKSKGDKESKKRKAVEEADDGDRS 61

Query: 64  ETSSELGEPVNSRLESGKVKKSSKKAKVVESDEDEVEKEVENPNSVVNFRISEPLKERLK 123
           ETSSELGEPVNSRL++GK KKSSKK+KVVESDED+VEKE ++ N+V  FRISEPL+ RLK
Sbjct: 62  ETSSELGEPVNSRLKNGKEKKSSKKSKVVESDEDDVEKEADDQNAVSKFRISEPLRARLK 121

Query: 124 EKGIMALFPIQAMTFEILFDGSDLVGRARTGQGKTLAFVLPILESLINGPAKSSRVTGYG 183
           EKGI +LFPIQAMTF+ ++DG DLVGRARTGQGKTLAFVLPILES++NGP+KSS+VTGYG
Sbjct: 122 EKGISSLFPIQAMTFDTVYDGFDLVGRARTGQGKTLAFVLPILESIVNGPSKSSKVTGYG 181

Query: 184 RSPSVIALLPTRELADQVFEDFQFYGQALGLDSCCLCGGMPYGPQENKLRRGVDIVIGTP 243
           R+PSVI LLPTRELADQVFEDF+FYG ALGL+SCCLCGGM YGPQENKLRRGVDIV+GTP
Sbjct: 182 RTPSVIVLLPTRELADQVFEDFKFYGHALGLESCCLCGGMLYGPQENKLRRGVDIVVGTP 241

Query: 244 GRIKDHINRNNIDLRTLKFRILDEADEMLRMGFVEDVEFILGKVADVNKVQTLLFSATLP 303
           GR+KDHINRNNIDLR+LKFR+LDEADEMLRMGFV+DVEFILGKV DVNKVQTLLFSATLP
Sbjct: 242 GRVKDHINRNNIDLRSLKFRVLDEADEMLRMGFVDDVEFILGKVEDVNKVQTLLFSATLP 301

Query: 304 DWVKNISSRFLKADKKTVDLVGNERMKASKDVRHIVIPCSDSERSRLIPDIIQCYSSGGQ 363
            WVK+I+SRFLKA+KKTVDLVGNE+MKAS DVRHIVIPCSDSERSRLIPDII+CYSSGG+
Sbjct: 302 SWVKDIASRFLKANKKTVDLVGNEKMKASNDVRHIVIPCSDSERSRLIPDIIRCYSSGGR 361

Query: 364 TIIFTERKESASELAGLLPGARALHGDIQQTQRQVTISAFKSAKFQVLVATNVAARGLDI 423
           TIIFTE KESASELAGLLP AR LHGDIQQ+QR VT+S F+S KF VLVATNVAARGLDI
Sbjct: 362 TIIFTETKESASELAGLLPEARPLHGDIQQSQRSVTLSGFRSGKFLVLVATNVAARGLDI 421

Query: 424 DNVQLVIQCEAPKDTESYIHRSGRTGRAGNTGVAVTLYEPRKSGSIFRIEREAGVKFEHL 483
           ++VQL+IQCEAPKD E+YIHRSGRTGRAGN+GVAVTLY+PRK+G I RIERE+GVKFEHL
Sbjct: 422 NDVQLIIQCEAPKDIEAYIHRSGRTGRAGNSGVAVTLYDPRKAGRIARIERESGVKFEHL 481

Query: 484 SAPQPVDIAKSAGASAAESVTQVSDTVIPPFMSAAEELVKNSGLSALEIIAKSLAKISGY 543
           SAPQP+DIA+SAGASAAESVTQV+D+VIPPF SAAEELV NS LS++E++AK+LAKISGY
Sbjct: 482 SAPQPIDIARSAGASAAESVTQVADSVIPPFKSAAEELVNNSSLSSVELLAKALAKISGY 541

Query: 544 TEIKSRSLLTSTEDHVTLMLGAGKPIYSPSFAYSVLRRFLPEEKVESVKGMTLTADGYSA 603
           TEIKSRSLLTS E+HVTL+L AGKPI+SPSFAYSVLRRFLPEEKVESVKGMTLTADGYSA
Sbjct: 542 TEIKSRSLLTSMENHVTLILEAGKPIFSPSFAYSVLRRFLPEEKVESVKGMTLTADGYSA 601

Query: 604 VFDVRTEDLDAFLAGQGNVADVNLGVIKTLPKLQQREQSRGGRF-SGGRGGFGDRRFGGG 663
           VFDV+TEDLDAFL GQGN   V L V+KTLPKLQ REQSRGGRF  GGRGG+G  R GG 
Sbjct: 602 VFDVQTEDLDAFLTGQGNAGGVRLEVLKTLPKLQDREQSRGGRFGGGGRGGYGGGRGGGY 661

Query: 664 GGSRFSGGRGGSRGGY-NRFSGNSGGRGRNFSGGNSR 691
           GGSRFSGGRGG RGG+ +R +  SGGRGRNFSGG+++
Sbjct: 662 GGSRFSGGRGGGRGGFSDRRNSFSGGRGRNFSGGSNK 698

[Close]

BLAST of Sed0020096 vs. NCBI nr
Match: XP_022928900.1 (DEAD-box ATP-dependent RNA helicase 7-like [Cucurbita moschata])

HSP 1 Score: 1066.6 bits (2757), Expect = 8.9e-308
Identity = 569/697 (81.64%), Postives = 637/697 (91.39%), Query Frame = 0


Query: 4   EKKEKKMKIKAVVEAL--------ESEELVLSDKKKKKSKGEKESKKRKAVEVADDEVRS 63
           +KKEKKMK KA+VEAL        +S+ELVLSDKKKKKSKG+KESKKRKAVE ADD  RS
Sbjct: 2   DKKEKKMKNKALVEALPLEDAFEQKSDELVLSDKKKKKSKGDKESKKRKAVEEADDGDRS 61

Query: 64  ETSSELGEPVNSRLESGKVKKSSKKAKVVESDEDEVEKEVENPNSVVNFRISEPLKERLK 123
           ETSSELGEPVNSRL++GK KKSSKK+KVVESDED+VEKE ++ N++  FRISEPL+ RLK
Sbjct: 62  ETSSELGEPVNSRLKNGKEKKSSKKSKVVESDEDDVEKEADDQNAISKFRISEPLRARLK 121

Query: 124 EKGIMALFPIQAMTFEILFDGSDLVGRARTGQGKTLAFVLPILESLINGPAKSSRVTGYG 183
           EKGI +LFPIQAMTF+ ++DG DLVGRARTGQGKTLAFVLPILES++NGP+KSS+VTGYG
Sbjct: 122 EKGISSLFPIQAMTFDTVYDGFDLVGRARTGQGKTLAFVLPILESIVNGPSKSSKVTGYG 181

Query: 184 RSPSVIALLPTRELADQVFEDFQFYGQALGLDSCCLCGGMPYGPQENKLRRGVDIVIGTP 243
           R+PSVI LLPTRELADQVFEDF+FYG ALGL+SCCLCGGM YGPQENKLRRGVDIV+GTP
Sbjct: 182 RTPSVIVLLPTRELADQVFEDFKFYGHALGLESCCLCGGMLYGPQENKLRRGVDIVVGTP 241

Query: 244 GRIKDHINRNNIDLRTLKFRILDEADEMLRMGFVEDVEFILGKVADVNKVQTLLFSATLP 303
           GR+KDHINRNNIDLR+LKFR+LDEADEMLRMGFV+DVEFILGKV DVNKVQTLLFSATLP
Sbjct: 242 GRVKDHINRNNIDLRSLKFRVLDEADEMLRMGFVDDVEFILGKVEDVNKVQTLLFSATLP 301

Query: 304 DWVKNISSRFLKADKKTVDLVGNERMKASKDVRHIVIPCSDSERSRLIPDIIQCYSSGGQ 363
            WVK+I+SRFLKA+KKTVDLVGNE+MKAS DVRHIVIPCSDSERSRLIPDII+CYSSGG+
Sbjct: 302 SWVKDIASRFLKANKKTVDLVGNEKMKASNDVRHIVIPCSDSERSRLIPDIIRCYSSGGR 361

Query: 364 TIIFTERKESASELAGLLPGARALHGDIQQTQRQVTISAFKSAKFQVLVATNVAARGLDI 423
           TIIFTE KESASELAGLLP AR LHGDIQQ+QR VT+S F+S KF VLVATNVAARGLDI
Sbjct: 362 TIIFTETKESASELAGLLPEARPLHGDIQQSQRSVTLSGFRSGKFLVLVATNVAARGLDI 421

Query: 424 DNVQLVIQCEAPKDTESYIHRSGRTGRAGNTGVAVTLYEPRKSGSIFRIEREAGVKFEHL 483
           ++VQL+IQCEAPKD E+YIHRSGRTGRAGN+GVAVTLY+PRK+G I RIERE+GVKFEHL
Sbjct: 422 NDVQLIIQCEAPKDIEAYIHRSGRTGRAGNSGVAVTLYDPRKAGRIARIERESGVKFEHL 481

Query: 484 SAPQPVDIAKSAGASAAESVTQVSDTVIPPFMSAAEELVKNSGLSALEIIAKSLAKISGY 543
           SAPQP+DIA+SAGASAAESVTQV+D+VIPPF SAAEELV NS LS++E++AK+LAKISGY
Sbjct: 482 SAPQPIDIARSAGASAAESVTQVADSVIPPFKSAAEELVNNSSLSSVELLAKALAKISGY 541

Query: 544 TEIKSRSLLTSTEDHVTLMLGAGKPIYSPSFAYSVLRRFLPEEKVESVKGMTLTADGYSA 603
           TEIKSRSLLTS E+HVTL+L AGKPI+SPSFAYSVLRRFLPEEKVESVKGMTLTADGYSA
Sbjct: 542 TEIKSRSLLTSMENHVTLILEAGKPIFSPSFAYSVLRRFLPEEKVESVKGMTLTADGYSA 601

Query: 604 VFDVRTEDLDAFLAGQGNVADVNLGVIKTLPKLQQREQSRGGRF-SGGRGGFGDRRFGGG 663
           VFDV+TEDLDAFL GQGN   V L V+KTLPKLQ REQSRGGRF  GGRGG+G  R GG 
Sbjct: 602 VFDVQTEDLDAFLTGQGNAGGVRLEVLKTLPKLQDREQSRGGRFGGGGRGGYGGGRGGGY 661

Query: 664 GGSRFSGGRGGSRGGY-NRFSGNSGGRGRNFSGGNSR 691
           GGSRFSGGRGG RGG+ +R +  SGGRGRNFSGG+++
Sbjct: 662 GGSRFSGGRGGGRGGFSDRRNSFSGGRGRNFSGGSNK 698

[Close]

BLAST of Sed0020096 vs. NCBI nr
Match: XP_022957864.1 (DEAD-box ATP-dependent RNA helicase 7-like [Cucurbita moschata] >KAG6605682.1 DEAD-box ATP-dependent RNA helicase 7, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035590.1 DEAD-box ATP-dependent RNA helicase 7 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1061.6 bits (2744), Expect = 2.9e-306
Identity = 577/703 (82.08%), Postives = 633/703 (90.04%), Query Frame = 0


Query: 10  MKIKAVVEALESEE--------LVLSDKKKKKSKGEKESKKRKAVEVADDEVRSETSSEL 69
           MK KA+VEAL +EE        LVLSDKKKKKSKG+KESKKRKAVEVADDE RSETSSEL
Sbjct: 1   MKNKALVEALGTEEAFEQRSDDLVLSDKKKKKSKGDKESKKRKAVEVADDEDRSETSSEL 60

Query: 70  GEPVNSRLESGKVKKSSKKAKVVESDEDEVEKEVENPNSVVNFRISEPLKERLKEKGIMA 129
           GEPVNSRL+SGK KKSSKK KV+ESDED+ EKEVE+PN+V  FRISEPLK RLKEKGI+A
Sbjct: 61  GEPVNSRLKSGKEKKSSKKTKVIESDEDDAEKEVEDPNAVSRFRISEPLKARLKEKGIIA 120

Query: 130 LFPIQAMTFEILFDGSDLVGRARTGQGKTLAFVLPILESLINGPAKSSRVTGYGRSPSVI 189
           LFPIQAMTF+ ++DG DLVGRARTGQGKTLAFVLPILE LINGP+KSSR TG+GRSPSVI
Sbjct: 121 LFPIQAMTFDTVYDGFDLVGRARTGQGKTLAFVLPILECLINGPSKSSRGTGFGRSPSVI 180

Query: 190 ALLPTRELADQVFEDFQFYGQALGLDSCCLCGGMPYGPQENKLRRGVDIVIGTPGRIKDH 249
            LLPTRELADQVFEDF+FYGQALGL+SCCLCGGM YGPQE KLRRGVDIVIGTPGR+KDH
Sbjct: 181 VLLPTRELADQVFEDFKFYGQALGLESCCLCGGMLYGPQETKLRRGVDIVIGTPGRVKDH 240

Query: 250 INRNNIDLRTLKFRILDEADEMLRMGFVEDVEFILGKVADVNKVQTLLFSATLPDWVKNI 309
           INRNNIDLR+LKFR+LDEADEMLRMGFV+DVEFILGKV DVNKVQTLLFSATLPDWVK I
Sbjct: 241 INRNNIDLRSLKFRVLDEADEMLRMGFVDDVEFILGKVEDVNKVQTLLFSATLPDWVKTI 300

Query: 310 SSRFLKADKKTVDLVGNERMKASKDVRHIVIPCSDSERSRLIPDIIQCYSSGGQTIIFTE 369
           +SRFLKA+KKT DLVGNE+MKASKDVRHIVIPCSDSERSRLIPDIIQCYSSGG+TIIFTE
Sbjct: 301 ASRFLKANKKTADLVGNEKMKASKDVRHIVIPCSDSERSRLIPDIIQCYSSGGRTIIFTE 360

Query: 370 RKESASELAGLLPGARALHGDIQQTQRQVTISAFKSAKFQVLVATNVAARGLDIDNVQLV 429
            KESASELAGLLPGARALHGDIQQ+QR VT+S F+S KF VLVATNVAARGLDI++VQL+
Sbjct: 361 TKESASELAGLLPGARALHGDIQQSQRSVTLSGFRSGKFLVLVATNVAARGLDINDVQLI 420

Query: 430 IQCEAPKDTESYIHRSGRTGRAGNTGVAVTLYEPRKSGSIFRIEREAGVKFEHLSAPQPV 489
           IQCEAPKD E+YIHRSGRTGRAGNTGVAVTLY+PRKSG I RIER++GVKFEHLSAPQP+
Sbjct: 421 IQCEAPKDIEAYIHRSGRTGRAGNTGVAVTLYDPRKSGRISRIERDSGVKFEHLSAPQPI 480

Query: 490 DIAKSAGASAAESVTQVSDTVIPPFMSAAEELVKNSGLSALEIIAKSLAKISGYTEIKSR 549
           DIA+ AGA A ES+TQVSD+VIPPF SAAEELV NS LSA+E++AK+LAK+SGYTEIKSR
Sbjct: 481 DIARCAGAGAVESITQVSDSVIPPFKSAAEELVNNSSLSAVELLAKALAKLSGYTEIKSR 540

Query: 550 SLLTSTEDHVTLMLGAGKPIYSPSFAYSVLRRFLPEEKVESVKGMTLTADGYSAVFDVRT 609
           SLLTS E+HVTL+L AGKPI+SPSFAYSVLRRFLPEEKVESVKGMTLTADGYSAVFDV+T
Sbjct: 541 SLLTSMENHVTLILEAGKPIFSPSFAYSVLRRFLPEEKVESVKGMTLTADGYSAVFDVQT 600

Query: 610 EDLDAFLAGQGNVADVNLGVIKTLPKLQQREQSR-GGRF----SGGRGGFGDRRFGGGGG 669
           EDLDAFL GQGN A+V+L V+KTLPKLQ REQSR GGRF    SGGRGGFG  R  GGG 
Sbjct: 601 EDLDAFLTGQGNAANVSLEVLKTLPKLQDREQSRGGGRFGGGGSGGRGGFGSDRRNGGG- 660

Query: 670 SRFSGGR--GGSRGGY-----NRFSGNS---GGRGRNFSGGNS 690
            RFSGGR  GG RGG+     NRFSG++   GGRGR+F GG++
Sbjct: 661 -RFSGGRGGGGGRGGFSDRRNNRFSGSNSGGGGRGRSFGGGSN 701

[Close]

BLAST of Sed0020096 vs. ExPASy Swiss-Prot
Match: Q39189 (DEAD-box ATP-dependent RNA helicase 7 OS=Arabidopsis thaliana OX=3702 GN=RH7 PE=1 SV=2)

HSP 1 Score: 775.0 bits (2000), Expect = 7.0e-223
Identity = 435/696 (62.50%), Postives = 529/696 (76.01%), Query Frame = 0


Query: 1   MSTEKKEKKMKIKAVVEALE--------SEELVLSD---KKKKKSKGEKESKKRKAVEVA 60
           +S +K+EKKMK K  ++  E         ++L LSD   ++ +K K +K+ KKRKA E  
Sbjct: 6   LSDKKEEKKMKKKMALDTPELDSKKGKKEQKLKLSDSDEEESEKKKSKKKDKKRKASE-E 65

Query: 61  DDEVRSETSSELGEPVNSRLESGKVKKSSKKAKVVESDEDEVEKEVENPNSVVNFRISEP 120
           +DEV+S++SSE              KKSSKK K+   D      EV+NPN+V  FRIS P
Sbjct: 66  EDEVKSDSSSE-------------KKKSSKKVKLGVED-----VEVDNPNAVSKFRISAP 125

Query: 121 LKERLKEKGIMALFPIQAMTFEILFDGSDLVGRARTGQGKTLAFVLPILESLINGPAKSS 180
           L+E+LK  GI ALFPIQA TF+++ DG+DLVGRARTGQGKTLAFVLPILESL+NGPAKS 
Sbjct: 126 LREKLKANGIEALFPIQASTFDMVLDGADLVGRARTGQGKTLAFVLPILESLVNGPAKSK 185

Query: 181 RVTGYGRSPSVIALLPTRELADQVFEDFQFYGQALGLDSCCLCGGMPYGPQENKLRRGVD 240
           R  GYGRSPSV+ LLPTRELA QV  DF  YG +LGL SCCL GG  Y  QE KL+RGVD
Sbjct: 186 RKMGYGRSPSVLVLLPTRELAKQVAADFDAYGGSLGLSSCCLYGGDSYPVQEGKLKRGVD 245

Query: 241 IVIGTPGRIKDHINRNNIDLRTLKFRILDEADEMLRMGFVEDVEFILGKVADVNKVQTLL 300
           IV+GTPGRIKDHI R N+D   L+FR+LDEADEMLRMGFVEDVE ILGKV D  KVQTLL
Sbjct: 246 IVVGTPGRIKDHIERQNLDFSYLQFRVLDEADEMLRMGFVEDVELILGKVEDSTKVQTLL 305

Query: 301 FSATLPDWVKNISSRFLKADKKTVDLVGNERMKASKDVRHIVIPCSDSERSRLIPDIIQC 360
           FSATLP WVKNIS+RFLK D+KT+DLVGN++MKAS  VRHI IPC+ +  +RLIPDII C
Sbjct: 306 FSATLPSWVKNISNRFLKRDQKTIDLVGNDKMKASNSVRHIAIPCNKAAMARLIPDIISC 365

Query: 361 YSSGGQTIIFTERKESASELAGLLPGARALHGDIQQTQRQVTISAFKSAKFQVLVATNVA 420
           YSSGGQTIIF E K   SEL+GLL G+RALHG+I Q+QR+VT++ F++ KF  LVATNVA
Sbjct: 366 YSSGGQTIIFAETKVQVSELSGLLDGSRALHGEIPQSQREVTLAGFRNGKFATLVATNVA 425

Query: 421 ARGLDIDNVQLVIQCEAPKDTESYIHRSGRTGRAGNTGVAVTLYEPRKSGSIFRIEREAG 480
           ARGLDI++VQL+IQCE P++ E+YIHRSGRTGRAGNTGVAVTLY+ RKS S+ RIE+EAG
Sbjct: 426 ARGLDINDVQLIIQCEPPREVEAYIHRSGRTGRAGNTGVAVTLYDSRKS-SVSRIEKEAG 485

Query: 481 VKFEHLSAPQPVDIAKSAGASAAESVTQVSDTVIPPFMSAAEELVKNSGLSALEIIAKSL 540
           +KFEHL+APQP +IA+S G  AAE V QV D+V+P F+ AA+EL++ SGLSA  ++AK+L
Sbjct: 486 IKFEHLAAPQPDEIARSGGMEAAEKVKQVCDSVVPAFLEAAKELLETSGLSAEVLLAKAL 545

Query: 541 AKISGYTEIKSRSLLTSTEDHVTLMLGAGKPIYSPSFAYSVLRRFLPEEKVESVKGMTLT 600
           AK +G+TEIK RSLLTS E++VTL L AGKPIYSPSF Y +LRR LP++KVE ++G++LT
Sbjct: 546 AKTAGFTEIKKRSLLTSMENYVTLHLEAGKPIYSPSFVYGLLRRVLPDDKVEMIEGLSLT 605

Query: 601 ADGYSAVFDVRTEDLDAFLAG-QGNVADVNLGVIKTLPKLQQREQSRGGRFSGGRGGFGD 660
           AD   AVFDV+  DLD F+AG Q +   ++L V+K +PKLQ+RE     RF GG  G   
Sbjct: 606 ADKTGAVFDVKQSDLDLFIAGAQKSAGSMSLEVVKVMPKLQEREPLPQKRFGGGGRG--- 665

Query: 661 RRFGGGGGSRFSGGRGGSRGGYNRFSGNSGGRGRNF 685
            RFGGGGG+RF GG G  RGG       SGGRG+ +
Sbjct: 666 NRFGGGGGNRFGGGGGRGRGG-------SGGRGQRY 671

[Close]

BLAST of Sed0020096 vs. ExPASy Swiss-Prot
Match: Q41382 (DEAD-box ATP-dependent RNA helicase 7 OS=Spinacia oleracea OX=3562 GN=RH7 PE=2 SV=1)

HSP 1 Score: 733.8 bits (1893), Expect = 1.8e-210
Identity = 424/688 (61.63%), Postives = 516/688 (75.00%), Query Frame = 0


Query: 3   TEKKEKKMKIKAVVEALESEELVL-----SDKKK-------KKSKGEKE-SKKRKAVEVA 62
           T KKEKKMK     E L+S++ V+     S KKK       KK K EKE  KKRKAV++ 
Sbjct: 15  TLKKEKKMK----SETLDSDDTVVKKEKSSSKKKEKSSSSGKKDKEEKEKKKKRKAVDLD 74

Query: 63  DDEVRSETSSELGEPVNSRLESGKVKKSSKKAKVVESDEDEVEKEVENPNSVVNFRISEP 122
           D   +S+ SSEL       +++  +K   KKAKV+E    E   E E+PNS+ NFRIS+P
Sbjct: 75  DSSDKSDNSSEL-------VQADDLK--PKKAKVME----EAVVEAEDPNSLSNFRISKP 134

Query: 123 LKERLKEKGIMALFPIQAMTFEILFDGSDLVGRARTGQGKTLAFVLPILESLINGPAKSS 182
           LK+ L  KGI ALFPIQAMTF+ + DG DLVGRARTGQGKTLAFVLPI+ESL+NG  K  
Sbjct: 135 LKDVLISKGIKALFPIQAMTFDNVIDGCDLVGRARTGQGKTLAFVLPIVESLVNGRTKDL 194

Query: 183 RVTGYGRSPSVIALLPTRELADQVFEDFQFYGQALGLDSCCLCGGMPYGPQENKLRRGVD 242
           R +G+GR PSV+ LLPTRELA QV  DFQ YG A+GL +C + GG P+  Q + L RGVD
Sbjct: 195 RRSGHGRLPSVLVLLPTRELATQVLADFQVYGGAVGLTACSVYGGAPFHSQISSLTRGVD 254

Query: 243 IVIGTPGRIKDHINRNNIDLRTLKFRILDEADEMLRMGFVEDVEFILGKVADVNKVQTLL 302
           IV+GTPGR+KD + +  + L +L FR+LDEADEML+MGFV+DVE ILGKV  V+KVQTLL
Sbjct: 255 IVVGTPGRVKDLLEKGVLKLGSLLFRVLDEADEMLKMGFVDDVELILGKVDHVSKVQTLL 314

Query: 303 FSATLPDWVKNISSRFLKADKKTVDLVGNERMKASKDVRHIVIPCSDSERSRLIPDIIQC 362
           FSATLP WVK IS+RFLK+ KKTVDLV +++MKAS  VRHIVIPCS S R  LIPDII+C
Sbjct: 315 FSATLPSWVKQISTRFLKSAKKTVDLVSDQKMKASISVRHIVIPCSASARPDLIPDIIRC 374

Query: 363 YSSGGQTIIFTERKESASELAGLLPGARALHGDIQQTQRQVTISAFKSAKFQVLVATNVA 422
           Y SGG++IIFTE KESAS+LAGLL GAR LHGDIQQTQR+VT+  F++ KF  LVATNVA
Sbjct: 375 YGSGGRSIIFTETKESASQLAGLLTGARPLHGDIQQTQREVTLKGFRTGKFMTLVATNVA 434

Query: 423 ARGLDIDNVQLVIQCEAPKDTESYIHRSGRTGRAGNTGVAVTLYEPRKSGSIFRIEREAG 482
           ARGLDI++VQL+IQCE P+D E YIHRSGRTGRAGNTGVAV LY+P++S S+ +IERE+G
Sbjct: 435 ARGLDINDVQLIIQCEPPRDVEDYIHRSGRTGRAGNTGVAVMLYDPKRS-SVTKIERESG 494

Query: 483 VKFEHLSAPQPVDIAKSAGASAAESVTQVSDTVIPPFMSAAEELVKNSGLSALEIIAKSL 542
           VKFEHLSAPQPVD+AK+ G  AA ++ Q+SD+VIP F  AAEEL+  SGLSA++I++K+L
Sbjct: 495 VKFEHLSAPQPVDVAKAVGIEAAAAILQISDSVIPAFKDAAEELLSTSGLSAVDILSKAL 554

Query: 543 AKISGYTEIKSRSLLTSTEDHVTLMLGAGKPIYSPSFAYSVLRRFLPEEKVESVKGMTLT 602
           AK +GY++IK RSLLT  E +VTL+L AG+P Y  SFAY+VL+RFLP  K +S+ G+ LT
Sbjct: 555 AKAAGYSDIKERSLLTGMEGYVTLLLDAGRPFYGQSFAYTVLKRFLPATKADSIMGVALT 614

Query: 603 ADGYSAVFDVRTEDLDAFLAGQGNVADVNLGVIKTLPKLQQREQ-SR--GGRFSGGR-GG 662
           AD   AVFDV  +DL+ FL G  N A VNL V+K LP L+++ Q SR  GG   GGR GG
Sbjct: 615 ADKSGAVFDVPVDDLETFLVGAENAAGVNLDVVKALPPLEEKVQISRRFGGGGRGGRGGG 674

Query: 663 FGDRRFG-GGGGSRFSGGRGGSRGGYNR 673
           +G R  G GGGG    GG GG  GGY R
Sbjct: 675 YGGRGGGYGGGGYGGGGGYGGRGGGYGR 684

[Close]

BLAST of Sed0020096 vs. ExPASy Swiss-Prot
Match: Q650T9 (DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0520700 PE=2 SV=1)

HSP 1 Score: 731.9 bits (1888), Expect = 6.8e-210
Identity = 401/700 (57.29%), Postives = 514/700 (73.43%), Query Frame = 0


Query: 6   KEKKMKIKAVVEALESEELVLSDKKKKKSKGEKESKKRKAVE-------VADDEVRSETS 65
           K+ K K+KA    +E+     S +KK     EK+ KKRKA E        +++E RS TS
Sbjct: 20  KKSKRKLKAAEVEVEA-----SSRKK-----EKKEKKRKAKEPSPSSSSSSEEEERSSTS 79

Query: 66  SELGEPVNSRLESGKVKKSSKKAKVVESDEDEVEKEVE----------NPNSVVNFRISE 125
           S+   P      + K KK   K KVV  +E+E + E E          +PN++ NFRISE
Sbjct: 80  SDEPAPA-----AKKAKKEKTKEKVVVEEEEEDDDEGELTASGDEDPADPNALANFRISE 139

Query: 126 PLKERLKEKGIMALFPIQAMTFEILFDGSDLVGRARTGQGKTLAFVLPILESLINGPAKS 185
            L+E+LK KGI ALFPIQA TF+++ DG DLVGRARTGQGKTLAFVLPILESL+NG  K+
Sbjct: 140 SLREKLKSKGIKALFPIQATTFDLVLDGHDLVGRARTGQGKTLAFVLPILESLVNGTHKA 199

Query: 186 SRVTGYGRSPSVIALLPTRELADQVFEDFQFYGQALGLDSCCLCGGMPYGPQENKLRRGV 245
           SR T YGR P+V+ LLPTRELA QV  DF FYG   GL +CC+ GG  Y  QE  +R+GV
Sbjct: 200 SRRTDYGRPPTVLVLLPTRELAKQVHTDFAFYGATFGLSACCVYGGSDYRSQEMAIRKGV 259

Query: 246 DIVIGTPGRIKDHINRNNIDLRTLKFRILDEADEMLRMGFVEDVEFILGKVADVNKVQTL 305
           DIV+GTPGR+KD + +  ++ R+LKFR+LDEADEML MGFV+DVE ILGKV DV KVQTL
Sbjct: 260 DIVVGTPGRVKDFVEKGTLNFRSLKFRVLDEADEMLNMGFVDDVELILGKVEDVTKVQTL 319

Query: 306 LFSATLPDWVKNISSRFLKADKKTVDLVGNERMKASKDVRHIVIPCSDSERSRLIPDIIQ 365
           LFSAT+P+WVK +S RFLK+ KKTVDLVG+E++KAS  VRH+ +PC+ + R+++IPDII+
Sbjct: 320 LFSATIPEWVKKLSLRFLKSGKKTVDLVGDEKLKASASVRHLALPCNRAARAQVIPDIIR 379

Query: 366 CYSSGGQTIIFTERKESASELAGLLPGARALHGDIQQTQRQVTISAFKSAKFQVLVATNV 425
           CYS GG+TIIFTE KESAS+L+GL+ G+RALHGD+ Q QR+V ++ F+S KF VLVATNV
Sbjct: 380 CYSRGGRTIIFTETKESASDLSGLIAGSRALHGDVAQAQREVILAGFRSGKFLVLVATNV 439

Query: 426 AARGLDIDNVQLVIQCEAPKDTESYIHRSGRTGRAGNTGVAVTLYEPRKSGSIFRIEREA 485
           AARGLDI++VQL+IQCE P+D E+YIHRSGRTGRAGNTGVAV L+EPR   ++ RIERE+
Sbjct: 440 AARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLFEPRYKFNVNRIERES 499

Query: 486 GVKFEHLSAPQPVDIAKSAGASAAESVTQVSDTVIPPFMSAAEELVKNSGLSALEIIAKS 545
           GVKFEH+SAPQP D+A+SAG  AAE+++ VSD+VIP F   AE+L+ +SG+SA++++AK+
Sbjct: 500 GVKFEHISAPQPTDVAQSAGTEAAEAISSVSDSVIPVFREQAEQLLNSSGMSAVDLLAKA 559

Query: 546 LAKISGYTEIKSRSLLTSTEDHVTLMLGAGKPIYSPSFAYSVLRRFLPEEKVESVKGMTL 605
           LAK  GYT+IK RSLL+S ++H TL+L  G+ +Y+  F  S L+RF+PEE++  VKG+T+
Sbjct: 560 LAKAVGYTDIKKRSLLSSMDNHTTLLLQTGRSVYAAGFVLSTLKRFMPEERLADVKGITI 619

Query: 606 TADGYSAVFDVRTEDLDAFLAGQGNVADVNLGVIKTLPKLQQREQSRGGRFSGGRGGFGD 665
           TADG  AVFDV + +++ ++ G  N A V +  +K LP LQ+REQS G R   G G FG+
Sbjct: 620 TADGTGAVFDVPSAEVEDYIQGAQNAAMVTVEEVKQLPPLQEREQSGGSR---GGGRFGN 679

Query: 666 RRFGGGGGSRFSGGRGGSRGGYNRFSGNSGGRGRNFSGGN 689
           RRF GGGG R  GGR           G  GGRGR   GGN
Sbjct: 680 RRFSGGGGGRGGGGR-----------GFGGGRGRGGGGGN 690

[Close]

BLAST of Sed0020096 vs. ExPASy Swiss-Prot
Match: Q3B8Q1 (Nucleolar RNA helicase 2 OS=Rattus norvegicus OX=10116 GN=Ddx21 PE=2 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 6.8e-109
Identity = 274/697 (39.31%), Postives = 389/697 (55.81%), Query Frame = 0


Query: 2   STEKKEKKMKIKAVVEALESEELVLSDKKKKKSKGEKESKKRKAVEVADDEVRSETSSEL 61
           S   K+KK  ++    + +++E+   +  ++++   K  K +K  E   D        E 
Sbjct: 91  SKTSKKKKEPLEKKAPSAKTKEMKAEEPSEEEADAPKPKKTKKGKEANGD------VGEK 150

Query: 62  GEPVNSRLESGKVKKSSKKAKVVESDEDEVEKEV---ENPNSVVNFRISEPLKERLKEKG 121
              + + L   K   SS +A     +E E EKE+   +   +  NF ISE   + LK +G
Sbjct: 151 SPGLKNGLSHPKPDSSSTQA---PGEESETEKEIPVEQKEGAFSNFPISEETVKLLKARG 210

Query: 122 IMALFPIQAMTFEILFDGSDLVGRARTGQGKTLAFVLPILESLINGPAKSSRVTGYGRSP 181
           +  LFPIQA TF  ++ G DL+ +ARTG GKT +F +P++E L  G  +  R    GR+P
Sbjct: 211 VNFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEKLQGGLQERKR----GRAP 270

Query: 182 SVIALLPTRELADQVFEDFQFYGQALGLDSCCLCGGMPYGPQENKLRRGVDIVIGTPGRI 241
            V+ L PTRELA+QV +DF    + L +   C  GG PYG Q  ++R G+DI++GTPGRI
Sbjct: 271 QVLVLAPTRELANQVSKDFSDITKKLSV--ACFYGGTPYGGQIERMRSGIDILVGTPGRI 330

Query: 242 KDHINRNNIDLRTLKFRILDEADEMLRMGFVEDVEFIL---GKVADVNKVQTLLFSATLP 301
           KDH+    +DL  LK  +LDE D+ML MGF + VE IL    K    +  QTLLFSAT P
Sbjct: 331 KDHLQNGKLDLTKLKHVVLDEVDQMLDMGFADQVEEILCVAYKKDSEDNPQTLLFSATCP 390

Query: 302 DWVKNISSRFLKADKKTVDLVGNERMKASKDVRHIVIPCSDSERSRLIPDIIQCYSS-GG 361
            WV N++ +++K+  + VDL+G +  KA+  V H+ I C  +ER+ +I D+I+ YS   G
Sbjct: 391 HWVFNVAKKYMKSTYEQVDLIGKKTQKAAITVEHLAIKCHWTERAAVIGDVIRVYSGHQG 450

Query: 362 QTIIFTERKESASELAG---LLPGARALHGDIQQTQRQVTISAFKSAKFQVLVATNVAAR 421
           +TIIF E K+ A EL+    +   A++LHGDI Q QR++T+  F++  F VLVATNVAAR
Sbjct: 451 RTIIFCETKKDAQELSQNTCIKQDAQSLHGDIPQKQREITLKGFRNGNFGVLVATNVAAR 510

Query: 422 GLDIDNVQLVIQCEAPKDTESYIHRSGRTGRAGNTGVAVTLYEPRKSGSIFRIEREAGVK 481
           GLDI  V LV+Q   PKD ESYIHRSGRTGRAG TGV +  Y+ ++   + ++E++AG+K
Sbjct: 511 GLDIPEVDLVVQSCPPKDVESYIHRSGRTGRAGRTGVCICFYQHKEEYQLAQVEQKAGIK 570

Query: 482 FEHLSAPQPVDIAKSAGASAAESVTQVSDTVIPPFMSAAEELVKNSGLSALEIIAKSLAK 541
           F+ +  P   +I K++   A   +  V  T I  F  +AE+L++  G  A+E +A +LA 
Sbjct: 571 FKRIGVPSATEIIKASSKDAIRLLDSVPPTAIGHFKQSAEKLIEEKG--AVEALAAALAH 630

Query: 542 ISGYTEIKSRSLLTSTEDHVTLMLGAGKPIYSPSFAYSVLRRFLPEEKVESVKGMTLTAD 601
           ISG T +  RSL+ S    VT++L     + + S+A+  L+  L E     VKGM     
Sbjct: 631 ISGATSVDQRSLINSQAGFVTMILRCSVEMPNISYAWKELKEQLGESIDAKVKGMVFLKG 690

Query: 602 GYSAVFDVRTEDLDAFLAGQGNVADVNLGVIKTLPKLQ-QREQSRGGR--FSGGRGGFGD 661
                FDVRTE +        +     L V    P+L+   E  RGGR    G RG F  
Sbjct: 691 KLGVCFDVRTEAVTEIKEKWHDSRRWQLTVATEQPELEGPPEGYRGGRGQRDGSRGSFRG 750

Query: 662 RRFGGGGGSRFSGGRGGSRG--GYNRFSGNSGGRGRN 684
           +R GG    R  G RGGSR   G     GN   R  N
Sbjct: 751 QR-GGSRNFRGQGQRGGSRNFRGQRPGGGNKSNRSPN 769

[Close]

BLAST of Sed0020096 vs. ExPASy Swiss-Prot
Match: Q9JIK5 (Nucleolar RNA helicase 2 OS=Mus musculus OX=10090 GN=Ddx21 PE=1 SV=3)

HSP 1 Score: 395.6 bits (1015), Expect = 1.2e-108
Identity = 282/715 (39.44%), Postives = 399/715 (55.80%), Query Frame = 0


Query: 7   EKKMKIK-AVVEALESEELVLSDKKKKKSK------GEKESKKRKAV-EVADDEV----- 66
           EK  K+K  + +  E E  +   KK KK K      GEK  K +  + + +++EV     
Sbjct: 142 EKSPKLKNGLSQPSEEEADIPKPKKMKKGKEANGDAGEKSPKLKNGLSQPSEEEVDIPKP 201

Query: 67  -----RSETSSELGEPVNSRLESGKVKKSSKKAKVV----ESDEDEVEKEV---ENPNSV 126
                  E S + GE  + RL+ G  + S  K+       E    E EKE+   +   + 
Sbjct: 202 KKMKKGKEASGDAGEK-SPRLKDGLSQPSEPKSNSSDAPGEESSSETEKEIPVEQKEGAF 261

Query: 127 VNFRISEPLKERLKEKGIMALFPIQAMTFEILFDGSDLVGRARTGQGKTLAFVLPILESL 186
            NF ISE   + LK +G+  LFPIQA TF  ++ G DL+ +ARTG GKT +F +P++E L
Sbjct: 262 SNFPISEETVKLLKARGVNFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEKL 321

Query: 187 INGPAKSSRVTGYGRSPSVIALLPTRELADQVFEDFQFYGQALGLDSCCLCGGMPYGPQE 246
             G  +  R    GR+P V+ L PTRELA+QV +DF    + L +   C  GG PYG Q 
Sbjct: 322 QGGLQERKR----GRAPQVLVLAPTRELANQVSKDFSDITKKLSV--ACFYGGTPYGGQI 381

Query: 247 NKLRRGVDIVIGTPGRIKDHINRNNIDLRTLKFRILDEADEMLRMGFVEDVEFIL---GK 306
            ++R G+DI++GTPGRIKDH+    +DL  LK  +LDE D+ML MGF + VE IL    K
Sbjct: 382 ERMRSGIDILVGTPGRIKDHLQNGKLDLTKLKHVVLDEVDQMLDMGFADQVEEILCVAYK 441

Query: 307 VADVNKVQTLLFSATLPDWVKNISSRFLKADKKTVDLVGNERMKASKDVRHIVIPCSDSE 366
               +  QTLLFSAT P WV N++ +++K+  + VDL+G +  KA+  V H+ I C  +E
Sbjct: 442 KDSEDNPQTLLFSATCPHWVFNVAKKYMKSTYEQVDLIGKKTQKAAITVEHLAIKCHWTE 501

Query: 367 RSRLIPDIIQCYSS-GGQTIIFTERKESASELAG---LLPGARALHGDIQQTQRQVTISA 426
           R+ +I D+I+ YS   G+TIIF E K+ A EL+    +   A++LHGDI Q QR++T+  
Sbjct: 502 RAAVIGDVIRVYSGHQGRTIIFCETKKDAQELSQNTCIKQDAQSLHGDIPQKQREITLKG 561

Query: 427 FKSAKFQVLVATNVAARGLDIDNVQLVIQCEAPKDTESYIHRSGRTGRAGNTGVAVTLYE 486
           F++  F VLVATNVAARGLDI  V LV+Q   PKD ESYIHRSGRTGRAG TGV +  Y+
Sbjct: 562 FRNGNFGVLVATNVAARGLDIPEVDLVVQSCPPKDVESYIHRSGRTGRAGRTGVCICFYQ 621

Query: 487 PRKSGSIFRIEREAGVKFEHLSAPQPVDIAKSAGASAAESVTQVSDTVIPPFMSAAEELV 546
            ++   + ++E++AG+KF+ +  P   +I K++   A   +  V  T I  F  +AE+L+
Sbjct: 622 NKEEYQLAQVEQKAGIKFKRIGVPSATEIIKASSKDAIRLLDSVPPTAISHFKQSAEKLI 681

Query: 547 KNSGLSALEIIAKSLAKISGYTEIKSRSLLTSTEDHVTLMLGAGKPIYSPSFAYSVLRRF 606
           +  G  A+E +A +LA ISG T +  RSL+ S    VT++L     + + S+A+  L+  
Sbjct: 682 EEKG--AVEALAAALAHISGATSVDQRSLINSQAGFVTMILRCSIEMPNISYAWKELKEQ 741

Query: 607 LPEEKVESVKGMTLTADGYSAVFDVRTEDLDAFLAGQGNVADVNLGVIKTLPKLQ---QR 666
           L E     VKGM          FDVRTE +        +     L V    P+L+     
Sbjct: 742 LGESIDAKVKGMVFLKGKLGVCFDVRTEAVTEIQEKWHDSRRWQLTVATEQPELEGPPDG 801

Query: 667 EQSRGGRFSGGRGGFGDRRFGGGGGSRFSGGRGGSRG-GYNRFSGNSGGRGRNFS 686
            + R G+  G RG F  +R GG    R  G RGGSR     R  G + G+ R+FS
Sbjct: 802 YRGRMGQRDGSRGAFRGQR-GGSRNFRGQGQRGGSRNFRGQRPGGGNRGQKRSFS 846

[Close]

BLAST of Sed0020096 vs. ExPASy TrEMBL
Match: A0A1S3CTB6 (RNA helicase OS=Cucumis melo OX=3656 GN=LOC103504655 PE=3 SV=1)

HSP 1 Score: 1073.5 bits (2775), Expect = 2.6e-310
Identity = 575/700 (82.14%), Postives = 633/700 (90.43%), Query Frame = 0


Query: 4   EKKEKKMKIKAVVEALESEE--------LVLSDKKKKKSKGEKESKKRKAVEVADDEVRS 63
           +KKEKKMK KA+VEAL S +        L LSDKKKKKSK +KESKKRKAVEVADD  RS
Sbjct: 2   DKKEKKMKNKALVEALASNDVFEQNADGLDLSDKKKKKSKSDKESKKRKAVEVADDGDRS 61

Query: 64  ETSSELGEPVNSRLESGKVKKSSKKAKVVESDEDEVEKEVENPNSVVNFRISEPLKERLK 123
           ETSSELGEPVNSR +SGK KKSSKK KVV+S++D+VEKE ENPN+V  FRISEPLK +LK
Sbjct: 62  ETSSELGEPVNSRSKSGKEKKSSKKVKVVDSEDDDVEKEAENPNAVTRFRISEPLKAKLK 121

Query: 124 EKGIMALFPIQAMTFEILFDGSDLVGRARTGQGKTLAFVLPILESLINGPAKSSRVTGYG 183
           EKGI +LFPIQAMTF+ ++DGSDLVGRARTGQGKTLAFVLPILESL+NGP KSSRVTGYG
Sbjct: 122 EKGISSLFPIQAMTFDTVYDGSDLVGRARTGQGKTLAFVLPILESLVNGPFKSSRVTGYG 181

Query: 184 RSPSVIALLPTRELADQVFEDFQFYGQALGLDSCCLCGGMPYGPQENKLRRGVDIVIGTP 243
           RSPSVI LLPTRELADQVFEDF+FYG+ALGLDSCCLCGGM YGPQE  L+RGVDIV+GTP
Sbjct: 182 RSPSVIVLLPTRELADQVFEDFKFYGRALGLDSCCLCGGMQYGPQEIALKRGVDIVVGTP 241

Query: 244 GRIKDHINRNNIDLRTLKFRILDEADEMLRMGFVEDVEFILGKVADVNKVQTLLFSATLP 303
           GR+KDHINRNNIDLR+LKFR+LDEADEML MGFV+DVEFILGKVADVNKVQTLLFSATLP
Sbjct: 242 GRVKDHINRNNIDLRSLKFRVLDEADEMLNMGFVDDVEFILGKVADVNKVQTLLFSATLP 301

Query: 304 DWVKNISSRFLKADKKTVDLVGNERMKASKDVRHIVIPCSDSERSRLIPDIIQCYSSGGQ 363
           DWVKNI+SRFLKA KKTVDLVGNE+MKASKDVRHIVIPCSDSERS+LIPDII+CYSSGG+
Sbjct: 302 DWVKNITSRFLKASKKTVDLVGNEKMKASKDVRHIVIPCSDSERSQLIPDIIRCYSSGGR 361

Query: 364 TIIFTERKESASELAGLLPGARALHGDIQQTQRQVTISAFKSAKFQVLVATNVAARGLDI 423
           TIIFTE KESASELAGLLPGAR LHGDIQQ+QR VTIS F+S KF +LVATNVAARGLDI
Sbjct: 362 TIIFTETKESASELAGLLPGARPLHGDIQQSQRSVTISGFRSGKFLILVATNVAARGLDI 421

Query: 424 DNVQLVIQCEAPKDTESYIHRSGRTGRAGNTGVAVTLYEPRKSGSIFRIEREAGVKFEHL 483
           ++VQL+IQCEAPKD E+YIHRSGRTGRAGNTGVAVTLY+PRKSG I RIER++GVKFEHL
Sbjct: 422 NDVQLIIQCEAPKDIEAYIHRSGRTGRAGNTGVAVTLYDPRKSGRIARIERDSGVKFEHL 481

Query: 484 SAPQPVDIAKSAGASAAESVTQVSDTVIPPFMSAAEELVKNSGLSALEIIAKSLAKISGY 543
           SAPQP+DIAKSAGASAAESVTQVSD+VIPPF SAAEE+V +S LSA+E++AK+LAK+SGY
Sbjct: 482 SAPQPIDIAKSAGASAAESVTQVSDSVIPPFKSAAEEMVNSSSLSAVELLAKALAKLSGY 541

Query: 544 TEIKSRSLLTSTEDHVTLMLGAGKPIYSPSFAYSVLRRFLPEEKVESVKGMTLTADGYSA 603
           TEIKSRSLLTS E+HVTL+L  GKPIYSPSFAYS+LRRFLPEEKVESVKGM+LTADGYSA
Sbjct: 542 TEIKSRSLLTSMENHVTLILEPGKPIYSPSFAYSILRRFLPEEKVESVKGMSLTADGYSA 601

Query: 604 VFDVRTEDLDAFLAGQGNVADVNLGVIKTLPKLQQREQSRGGRF-SGGRGGFGDRRFGGG 663
           VFDV+TEDLDAFL GQ N ADV++ V+K+LPKLQ REQSRGGRF  GGRGGFGDRR    
Sbjct: 602 VFDVKTEDLDAFLTGQANAADVSIEVLKSLPKLQDREQSRGGRFGGGGRGGFGDRR---N 661

Query: 664 GGSRFSGGRGGSRGGY----NRFSGNSGGRGRNFSGGNSR 691
           GGSRFSGGRGG RGG+    NRF   SGGRGRNF GG SR
Sbjct: 662 GGSRFSGGRGGGRGGFSDRNNRF---SGGRGRNFGGGGSR 695

[Close]

BLAST of Sed0020096 vs. ExPASy TrEMBL
Match: A0A6J1ESS9 (RNA helicase OS=Cucurbita moschata OX=3662 GN=LOC111435671 PE=3 SV=1)

HSP 1 Score: 1066.6 bits (2757), Expect = 4.3e-308
Identity = 569/697 (81.64%), Postives = 637/697 (91.39%), Query Frame = 0


Query: 4   EKKEKKMKIKAVVEAL--------ESEELVLSDKKKKKSKGEKESKKRKAVEVADDEVRS 63
           +KKEKKMK KA+VEAL        +S+ELVLSDKKKKKSKG+KESKKRKAVE ADD  RS
Sbjct: 2   DKKEKKMKNKALVEALPLEDAFEQKSDELVLSDKKKKKSKGDKESKKRKAVEEADDGDRS 61

Query: 64  ETSSELGEPVNSRLESGKVKKSSKKAKVVESDEDEVEKEVENPNSVVNFRISEPLKERLK 123
           ETSSELGEPVNSRL++GK KKSSKK+KVVESDED+VEKE ++ N++  FRISEPL+ RLK
Sbjct: 62  ETSSELGEPVNSRLKNGKEKKSSKKSKVVESDEDDVEKEADDQNAISKFRISEPLRARLK 121

Query: 124 EKGIMALFPIQAMTFEILFDGSDLVGRARTGQGKTLAFVLPILESLINGPAKSSRVTGYG 183
           EKGI +LFPIQAMTF+ ++DG DLVGRARTGQGKTLAFVLPILES++NGP+KSS+VTGYG
Sbjct: 122 EKGISSLFPIQAMTFDTVYDGFDLVGRARTGQGKTLAFVLPILESIVNGPSKSSKVTGYG 181

Query: 184 RSPSVIALLPTRELADQVFEDFQFYGQALGLDSCCLCGGMPYGPQENKLRRGVDIVIGTP 243
           R+PSVI LLPTRELADQVFEDF+FYG ALGL+SCCLCGGM YGPQENKLRRGVDIV+GTP
Sbjct: 182 RTPSVIVLLPTRELADQVFEDFKFYGHALGLESCCLCGGMLYGPQENKLRRGVDIVVGTP 241

Query: 244 GRIKDHINRNNIDLRTLKFRILDEADEMLRMGFVEDVEFILGKVADVNKVQTLLFSATLP 303
           GR+KDHINRNNIDLR+LKFR+LDEADEMLRMGFV+DVEFILGKV DVNKVQTLLFSATLP
Sbjct: 242 GRVKDHINRNNIDLRSLKFRVLDEADEMLRMGFVDDVEFILGKVEDVNKVQTLLFSATLP 301

Query: 304 DWVKNISSRFLKADKKTVDLVGNERMKASKDVRHIVIPCSDSERSRLIPDIIQCYSSGGQ 363
            WVK+I+SRFLKA+KKTVDLVGNE+MKAS DVRHIVIPCSDSERSRLIPDII+CYSSGG+
Sbjct: 302 SWVKDIASRFLKANKKTVDLVGNEKMKASNDVRHIVIPCSDSERSRLIPDIIRCYSSGGR 361

Query: 364 TIIFTERKESASELAGLLPGARALHGDIQQTQRQVTISAFKSAKFQVLVATNVAARGLDI 423
           TIIFTE KESASELAGLLP AR LHGDIQQ+QR VT+S F+S KF VLVATNVAARGLDI
Sbjct: 362 TIIFTETKESASELAGLLPEARPLHGDIQQSQRSVTLSGFRSGKFLVLVATNVAARGLDI 421

Query: 424 DNVQLVIQCEAPKDTESYIHRSGRTGRAGNTGVAVTLYEPRKSGSIFRIEREAGVKFEHL 483
           ++VQL+IQCEAPKD E+YIHRSGRTGRAGN+GVAVTLY+PRK+G I RIERE+GVKFEHL
Sbjct: 422 NDVQLIIQCEAPKDIEAYIHRSGRTGRAGNSGVAVTLYDPRKAGRIARIERESGVKFEHL 481

Query: 484 SAPQPVDIAKSAGASAAESVTQVSDTVIPPFMSAAEELVKNSGLSALEIIAKSLAKISGY 543
           SAPQP+DIA+SAGASAAESVTQV+D+VIPPF SAAEELV NS LS++E++AK+LAKISGY
Sbjct: 482 SAPQPIDIARSAGASAAESVTQVADSVIPPFKSAAEELVNNSSLSSVELLAKALAKISGY 541

Query: 544 TEIKSRSLLTSTEDHVTLMLGAGKPIYSPSFAYSVLRRFLPEEKVESVKGMTLTADGYSA 603
           TEIKSRSLLTS E+HVTL+L AGKPI+SPSFAYSVLRRFLPEEKVESVKGMTLTADGYSA
Sbjct: 542 TEIKSRSLLTSMENHVTLILEAGKPIFSPSFAYSVLRRFLPEEKVESVKGMTLTADGYSA 601

Query: 604 VFDVRTEDLDAFLAGQGNVADVNLGVIKTLPKLQQREQSRGGRF-SGGRGGFGDRRFGGG 663
           VFDV+TEDLDAFL GQGN   V L V+KTLPKLQ REQSRGGRF  GGRGG+G  R GG 
Sbjct: 602 VFDVQTEDLDAFLTGQGNAGGVRLEVLKTLPKLQDREQSRGGRFGGGGRGGYGGGRGGGY 661

Query: 664 GGSRFSGGRGGSRGGY-NRFSGNSGGRGRNFSGGNSR 691
           GGSRFSGGRGG RGG+ +R +  SGGRGRNFSGG+++
Sbjct: 662 GGSRFSGGRGGGRGGFSDRRNSFSGGRGRNFSGGSNK 698

[Close]

BLAST of Sed0020096 vs. ExPASy TrEMBL
Match: A0A6J1H389 (RNA helicase OS=Cucurbita moschata OX=3662 GN=LOC111459276 PE=3 SV=1)

HSP 1 Score: 1061.6 bits (2744), Expect = 1.4e-306
Identity = 577/703 (82.08%), Postives = 633/703 (90.04%), Query Frame = 0


Query: 10  MKIKAVVEALESEE--------LVLSDKKKKKSKGEKESKKRKAVEVADDEVRSETSSEL 69
           MK KA+VEAL +EE        LVLSDKKKKKSKG+KESKKRKAVEVADDE RSETSSEL
Sbjct: 1   MKNKALVEALGTEEAFEQRSDDLVLSDKKKKKSKGDKESKKRKAVEVADDEDRSETSSEL 60

Query: 70  GEPVNSRLESGKVKKSSKKAKVVESDEDEVEKEVENPNSVVNFRISEPLKERLKEKGIMA 129
           GEPVNSRL+SGK KKSSKK KV+ESDED+ EKEVE+PN+V  FRISEPLK RLKEKGI+A
Sbjct: 61  GEPVNSRLKSGKEKKSSKKTKVIESDEDDAEKEVEDPNAVSRFRISEPLKARLKEKGIIA 120

Query: 130 LFPIQAMTFEILFDGSDLVGRARTGQGKTLAFVLPILESLINGPAKSSRVTGYGRSPSVI 189
           LFPIQAMTF+ ++DG DLVGRARTGQGKTLAFVLPILE LINGP+KSSR TG+GRSPSVI
Sbjct: 121 LFPIQAMTFDTVYDGFDLVGRARTGQGKTLAFVLPILECLINGPSKSSRGTGFGRSPSVI 180

Query: 190 ALLPTRELADQVFEDFQFYGQALGLDSCCLCGGMPYGPQENKLRRGVDIVIGTPGRIKDH 249
            LLPTRELADQVFEDF+FYGQALGL+SCCLCGGM YGPQE KLRRGVDIVIGTPGR+KDH
Sbjct: 181 VLLPTRELADQVFEDFKFYGQALGLESCCLCGGMLYGPQETKLRRGVDIVIGTPGRVKDH 240

Query: 250 INRNNIDLRTLKFRILDEADEMLRMGFVEDVEFILGKVADVNKVQTLLFSATLPDWVKNI 309
           INRNNIDLR+LKFR+LDEADEMLRMGFV+DVEFILGKV DVNKVQTLLFSATLPDWVK I
Sbjct: 241 INRNNIDLRSLKFRVLDEADEMLRMGFVDDVEFILGKVEDVNKVQTLLFSATLPDWVKTI 300

Query: 310 SSRFLKADKKTVDLVGNERMKASKDVRHIVIPCSDSERSRLIPDIIQCYSSGGQTIIFTE 369
           +SRFLKA+KKT DLVGNE+MKASKDVRHIVIPCSDSERSRLIPDIIQCYSSGG+TIIFTE
Sbjct: 301 ASRFLKANKKTADLVGNEKMKASKDVRHIVIPCSDSERSRLIPDIIQCYSSGGRTIIFTE 360

Query: 370 RKESASELAGLLPGARALHGDIQQTQRQVTISAFKSAKFQVLVATNVAARGLDIDNVQLV 429
            KESASELAGLLPGARALHGDIQQ+QR VT+S F+S KF VLVATNVAARGLDI++VQL+
Sbjct: 361 TKESASELAGLLPGARALHGDIQQSQRSVTLSGFRSGKFLVLVATNVAARGLDINDVQLI 420

Query: 430 IQCEAPKDTESYIHRSGRTGRAGNTGVAVTLYEPRKSGSIFRIEREAGVKFEHLSAPQPV 489
           IQCEAPKD E+YIHRSGRTGRAGNTGVAVTLY+PRKSG I RIER++GVKFEHLSAPQP+
Sbjct: 421 IQCEAPKDIEAYIHRSGRTGRAGNTGVAVTLYDPRKSGRISRIERDSGVKFEHLSAPQPI 480

Query: 490 DIAKSAGASAAESVTQVSDTVIPPFMSAAEELVKNSGLSALEIIAKSLAKISGYTEIKSR 549
           DIA+ AGA A ES+TQVSD+VIPPF SAAEELV NS LSA+E++AK+LAK+SGYTEIKSR
Sbjct: 481 DIARCAGAGAVESITQVSDSVIPPFKSAAEELVNNSSLSAVELLAKALAKLSGYTEIKSR 540

Query: 550 SLLTSTEDHVTLMLGAGKPIYSPSFAYSVLRRFLPEEKVESVKGMTLTADGYSAVFDVRT 609
           SLLTS E+HVTL+L AGKPI+SPSFAYSVLRRFLPEEKVESVKGMTLTADGYSAVFDV+T
Sbjct: 541 SLLTSMENHVTLILEAGKPIFSPSFAYSVLRRFLPEEKVESVKGMTLTADGYSAVFDVQT 600

Query: 610 EDLDAFLAGQGNVADVNLGVIKTLPKLQQREQSR-GGRF----SGGRGGFGDRRFGGGGG 669
           EDLDAFL GQGN A+V+L V+KTLPKLQ REQSR GGRF    SGGRGGFG  R  GGG 
Sbjct: 601 EDLDAFLTGQGNAANVSLEVLKTLPKLQDREQSRGGGRFGGGGSGGRGGFGSDRRNGGG- 660

Query: 670 SRFSGGR--GGSRGGY-----NRFSGNS---GGRGRNFSGGNS 690
            RFSGGR  GG RGG+     NRFSG++   GGRGR+F GG++
Sbjct: 661 -RFSGGRGGGGGRGGFSDRRNNRFSGSNSGGGGRGRSFGGGSN 701

[Close]

BLAST of Sed0020096 vs. ExPASy TrEMBL
Match: A0A6J1JZR9 (RNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111491171 PE=3 SV=1)

HSP 1 Score: 1058.5 bits (2736), Expect = 1.2e-305
Identity = 576/703 (81.93%), Postives = 631/703 (89.76%), Query Frame = 0


Query: 10  MKIKAVVEALESEE--------LVLSDKKKKKSKGEKESKKRKAVEVADDEVRSETSSEL 69
           MK KA+VEAL +EE        LVLSDKKKKKSKG+KESKKRKAVEVADDE RSETSSEL
Sbjct: 1   MKNKALVEALGTEEAFEQRSDDLVLSDKKKKKSKGDKESKKRKAVEVADDEDRSETSSEL 60

Query: 70  GEPVNSRLESGKVKKSSKKAKVVESDEDEVEKEVENPNSVVNFRISEPLKERLKEKGIMA 129
           GEPVNSRL+SGK KKSSKK KVVESDED+ EKEVE+PN+V  FRISEPLK RLKEKGI+A
Sbjct: 61  GEPVNSRLKSGKEKKSSKKTKVVESDEDDAEKEVEDPNAVSRFRISEPLKARLKEKGIIA 120

Query: 130 LFPIQAMTFEILFDGSDLVGRARTGQGKTLAFVLPILESLINGPAKSSRVTGYGRSPSVI 189
           LFPIQAMTF+ ++DG DLVGRARTGQGKTLAFVLPILE LINGP+KSSR TG+GRSPSVI
Sbjct: 121 LFPIQAMTFDTVYDGFDLVGRARTGQGKTLAFVLPILECLINGPSKSSRGTGFGRSPSVI 180

Query: 190 ALLPTRELADQVFEDFQFYGQALGLDSCCLCGGMPYGPQENKLRRGVDIVIGTPGRIKDH 249
            LLPTRELADQVFEDF+FYG ALGL+SCCLCGGM YGPQE KLRRGVDIVIGTPGR+KDH
Sbjct: 181 VLLPTRELADQVFEDFKFYGHALGLESCCLCGGMLYGPQETKLRRGVDIVIGTPGRVKDH 240

Query: 250 INRNNIDLRTLKFRILDEADEMLRMGFVEDVEFILGKVADVNKVQTLLFSATLPDWVKNI 309
           INRNNIDLR+LKFR+LDEADEMLRMGFV+DVEFILGKV DVNKVQTLLFSATLPDWVK I
Sbjct: 241 INRNNIDLRSLKFRVLDEADEMLRMGFVDDVEFILGKVEDVNKVQTLLFSATLPDWVKTI 300

Query: 310 SSRFLKADKKTVDLVGNERMKASKDVRHIVIPCSDSERSRLIPDIIQCYSSGGQTIIFTE 369
           +SRFLKA+KKT DLVGNE+MKASKDVRHIVIPCSDSERSRLIPDIIQCYSSGG+TIIFTE
Sbjct: 301 ASRFLKANKKTADLVGNEKMKASKDVRHIVIPCSDSERSRLIPDIIQCYSSGGRTIIFTE 360

Query: 370 RKESASELAGLLPGARALHGDIQQTQRQVTISAFKSAKFQVLVATNVAARGLDIDNVQLV 429
            KESASELAGLLPGARALHGDIQQ+QR VT+S F+S KF VLVATNVAARGLDI++VQL+
Sbjct: 361 TKESASELAGLLPGARALHGDIQQSQRSVTLSGFRSGKFLVLVATNVAARGLDINDVQLI 420

Query: 430 IQCEAPKDTESYIHRSGRTGRAGNTGVAVTLYEPRKSGSIFRIEREAGVKFEHLSAPQPV 489
           IQCEAPKD E+YIHRSGRTGRAGNTGVAVTLY+PRKSG I RIER++GVKFEHLSAPQP+
Sbjct: 421 IQCEAPKDIEAYIHRSGRTGRAGNTGVAVTLYDPRKSGRISRIERDSGVKFEHLSAPQPI 480

Query: 490 DIAKSAGASAAESVTQVSDTVIPPFMSAAEELVKNSGLSALEIIAKSLAKISGYTEIKSR 549
           DIA+ AGA A ES+TQVSD+VIPPF SAAEELV NS LSA+E++AK+LAK+SGYTEIKSR
Sbjct: 481 DIARCAGAGAVESITQVSDSVIPPFKSAAEELVNNSSLSAVELLAKALAKLSGYTEIKSR 540

Query: 550 SLLTSTEDHVTLMLGAGKPIYSPSFAYSVLRRFLPEEKVESVKGMTLTADGYSAVFDVRT 609
           SLLTS E+HVTL+L AGKPI+SPSFAYSVLRRFLPEEKVESVKGMTLTADGYSAVFDV+T
Sbjct: 541 SLLTSMENHVTLILEAGKPIFSPSFAYSVLRRFLPEEKVESVKGMTLTADGYSAVFDVQT 600

Query: 610 EDLDAFLAGQGNVADVNLGVIKTLPKLQQREQSR-GGRF---SGGRGGFGDRRFGGGGGS 669
           EDLDAFL GQGN A+V+L V+KTLPKLQ REQSR GGRF    GGRGGFG  R  GGG  
Sbjct: 601 EDLDAFLTGQGNAANVSLEVLKTLPKLQDREQSRGGGRFGGGGGGRGGFGSDRRNGGG-- 660

Query: 670 RFSGGR---GGSRGGY-----NRFSGNS---GGRGRNFSGGNS 690
           RFSGGR   GG RGG+     NRFSG++   GGRGR+F GG++
Sbjct: 661 RFSGGRGGGGGGRGGFSDRRNNRFSGSNSGGGGRGRSFGGGSN 701

[Close]

BLAST of Sed0020096 vs. ExPASy TrEMBL
Match: A0A0A0KL93 (RNA helicase OS=Cucumis sativus OX=3659 GN=Csa_5G171750 PE=3 SV=1)

HSP 1 Score: 1057.0 bits (2732), Expect = 3.4e-305
Identity = 563/694 (81.12%), Postives = 629/694 (90.63%), Query Frame = 0


Query: 4   EKKEKKMKIKAVVEALESEE--------LVLSDKKKKKSKGEKESKKRKAVEVADDEVRS 63
           +KKEKKMK KA+VEAL S +        L LSDKKKKKSK +KESKKRKAVEVADD  RS
Sbjct: 2   DKKEKKMKNKALVEALASNDALEHNADGLDLSDKKKKKSKSDKESKKRKAVEVADDGDRS 61

Query: 64  ETSSELGEPVNSRLESGKVKKSSKKAKVVESDEDEVEKEVENPNSVVNFRISEPLKERLK 123
           ETSSELGEPVNSR +SGK KKSSKKAKVV+S++D+VEKE ENPN+V  FRISEPLK +L+
Sbjct: 62  ETSSELGEPVNSRSKSGKEKKSSKKAKVVDSEDDDVEKEAENPNAVTQFRISEPLKAKLR 121

Query: 124 EKGIMALFPIQAMTFEILFDGSDLVGRARTGQGKTLAFVLPILESLINGPAKSSRVTGYG 183
           EKGI +LFPIQA TF+ ++DGSDLVGRARTGQGKTLAFVLPILESL+NGP KSSRVTGYG
Sbjct: 122 EKGITSLFPIQATTFDTVYDGSDLVGRARTGQGKTLAFVLPILESLVNGPYKSSRVTGYG 181

Query: 184 RSPSVIALLPTRELADQVFEDFQFYGQALGLDSCCLCGGMPYGPQENKLRRGVDIVIGTP 243
           RSPSVI LLPTRELADQVFEDF+FYG+ LGLDSCCLCGG+ YGPQE  L+RGVDIV+GTP
Sbjct: 182 RSPSVIVLLPTRELADQVFEDFKFYGRTLGLDSCCLCGGLQYGPQEIALKRGVDIVVGTP 241

Query: 244 GRIKDHINRNNIDLRTLKFRILDEADEMLRMGFVEDVEFILGKVADVNKVQTLLFSATLP 303
           GR+KDHINRNNIDLR+LKFR+LDEADEML MGFV+DVEFILGKVADVNKVQTLLFSATLP
Sbjct: 242 GRVKDHINRNNIDLRSLKFRVLDEADEMLNMGFVDDVEFILGKVADVNKVQTLLFSATLP 301

Query: 304 DWVKNISSRFLKADKKTVDLVGNERMKASKDVRHIVIPCSDSERSRLIPDIIQCYSSGGQ 363
           DWVKNI+SRFLKA KKTVDLVGNE+MKASKDVRHIVIPCSD+ERSRLIPDII+CYSSGG+
Sbjct: 302 DWVKNITSRFLKASKKTVDLVGNEKMKASKDVRHIVIPCSDTERSRLIPDIIRCYSSGGR 361

Query: 364 TIIFTERKESASELAGLLPGARALHGDIQQTQRQVTISAFKSAKFQVLVATNVAARGLDI 423
           TIIFTE KESASELAGLLPGAR LHGDIQQ+QR VTIS F+S KF +LVATNVAARGLDI
Sbjct: 362 TIIFTETKESASELAGLLPGARPLHGDIQQSQRSVTISGFRSGKFLILVATNVAARGLDI 421

Query: 424 DNVQLVIQCEAPKDTESYIHRSGRTGRAGNTGVAVTLYEPRKSGSIFRIEREAGVKFEHL 483
           ++VQL+IQCEAPKD E+YIHRSGRTGRAGNTGVAVTLY+PRKSG I RIER++GVKFEHL
Sbjct: 422 NDVQLIIQCEAPKDIEAYIHRSGRTGRAGNTGVAVTLYDPRKSGRIARIERDSGVKFEHL 481

Query: 484 SAPQPVDIAKSAGASAAESVTQVSDTVIPPFMSAAEELVKNSGLSALEIIAKSLAKISGY 543
           SAPQP+DIA+SAGASAAESVTQVSD+VIPPF SAAEE+V +S LSA+E++AK+LAK+SGY
Sbjct: 482 SAPQPIDIARSAGASAAESVTQVSDSVIPPFKSAAEEMVNSSTLSAVELLAKALAKLSGY 541

Query: 544 TEIKSRSLLTSTEDHVTLMLGAGKPIYSPSFAYSVLRRFLPEEKVESVKGMTLTADGYSA 603
           TEIKSRSLLTS E++VTL+L  GKP+YSPSFAYS+LRRFLPEEKVESVKGM+LTADG SA
Sbjct: 542 TEIKSRSLLTSMENYVTLILEPGKPMYSPSFAYSILRRFLPEEKVESVKGMSLTADGSSA 601

Query: 604 VFDVRTEDLDAFLAGQGNVADVNLGVIKTLPKLQQREQSRGGRFS-GGRGGFGDRRFGGG 663
           VFDV+TEDLDAFL GQ N ADV++ V+K+LPKLQ REQSRGGRF  GGRGGFGDRR    
Sbjct: 602 VFDVQTEDLDAFLTGQANAADVSIEVLKSLPKLQDREQSRGGRFGFGGRGGFGDRR---S 661

Query: 664 GGSRFSGGRGGSRGGYNRFSGNSGGRGRNFSGGN 689
           GGSRFSGGRGG RGG++  +  SGGRGRNF GG+
Sbjct: 662 GGSRFSGGRGGGRGGFSDRNRFSGGRGRNFGGGS 692

[Close]

BLAST of Sed0020096 vs. TAIR 10
Match: AT5G62190.1 (DEAD box RNA helicase (PRH75) )

HSP 1 Score: 775.0 bits (2000), Expect = 5.0e-224
Identity = 435/696 (62.50%), Postives = 529/696 (76.01%), Query Frame = 0


Query: 1   MSTEKKEKKMKIKAVVEALE--------SEELVLSD---KKKKKSKGEKESKKRKAVEVA 60
           +S +K+EKKMK K  ++  E         ++L LSD   ++ +K K +K+ KKRKA E  
Sbjct: 6   LSDKKEEKKMKKKMALDTPELDSKKGKKEQKLKLSDSDEEESEKKKSKKKDKKRKASE-E 65

Query: 61  DDEVRSETSSELGEPVNSRLESGKVKKSSKKAKVVESDEDEVEKEVENPNSVVNFRISEP 120
           +DEV+S++SSE              KKSSKK K+   D      EV+NPN+V  FRIS P
Sbjct: 66  EDEVKSDSSSE-------------KKKSSKKVKLGVED-----VEVDNPNAVSKFRISAP 125

Query: 121 LKERLKEKGIMALFPIQAMTFEILFDGSDLVGRARTGQGKTLAFVLPILESLINGPAKSS 180
           L+E+LK  GI ALFPIQA TF+++ DG+DLVGRARTGQGKTLAFVLPILESL+NGPAKS 
Sbjct: 126 LREKLKANGIEALFPIQASTFDMVLDGADLVGRARTGQGKTLAFVLPILESLVNGPAKSK 185

Query: 181 RVTGYGRSPSVIALLPTRELADQVFEDFQFYGQALGLDSCCLCGGMPYGPQENKLRRGVD 240
           R  GYGRSPSV+ LLPTRELA QV  DF  YG +LGL SCCL GG  Y  QE KL+RGVD
Sbjct: 186 RKMGYGRSPSVLVLLPTRELAKQVAADFDAYGGSLGLSSCCLYGGDSYPVQEGKLKRGVD 245

Query: 241 IVIGTPGRIKDHINRNNIDLRTLKFRILDEADEMLRMGFVEDVEFILGKVADVNKVQTLL 300
           IV+GTPGRIKDHI R N+D   L+FR+LDEADEMLRMGFVEDVE ILGKV D  KVQTLL
Sbjct: 246 IVVGTPGRIKDHIERQNLDFSYLQFRVLDEADEMLRMGFVEDVELILGKVEDSTKVQTLL 305

Query: 301 FSATLPDWVKNISSRFLKADKKTVDLVGNERMKASKDVRHIVIPCSDSERSRLIPDIIQC 360
           FSATLP WVKNIS+RFLK D+KT+DLVGN++MKAS  VRHI IPC+ +  +RLIPDII C
Sbjct: 306 FSATLPSWVKNISNRFLKRDQKTIDLVGNDKMKASNSVRHIAIPCNKAAMARLIPDIISC 365

Query: 361 YSSGGQTIIFTERKESASELAGLLPGARALHGDIQQTQRQVTISAFKSAKFQVLVATNVA 420
           YSSGGQTIIF E K   SEL+GLL G+RALHG+I Q+QR+VT++ F++ KF  LVATNVA
Sbjct: 366 YSSGGQTIIFAETKVQVSELSGLLDGSRALHGEIPQSQREVTLAGFRNGKFATLVATNVA 425

Query: 421 ARGLDIDNVQLVIQCEAPKDTESYIHRSGRTGRAGNTGVAVTLYEPRKSGSIFRIEREAG 480
           ARGLDI++VQL+IQCE P++ E+YIHRSGRTGRAGNTGVAVTLY+ RKS S+ RIE+EAG
Sbjct: 426 ARGLDINDVQLIIQCEPPREVEAYIHRSGRTGRAGNTGVAVTLYDSRKS-SVSRIEKEAG 485

Query: 481 VKFEHLSAPQPVDIAKSAGASAAESVTQVSDTVIPPFMSAAEELVKNSGLSALEIIAKSL 540
           +KFEHL+APQP +IA+S G  AAE V QV D+V+P F+ AA+EL++ SGLSA  ++AK+L
Sbjct: 486 IKFEHLAAPQPDEIARSGGMEAAEKVKQVCDSVVPAFLEAAKELLETSGLSAEVLLAKAL 545

Query: 541 AKISGYTEIKSRSLLTSTEDHVTLMLGAGKPIYSPSFAYSVLRRFLPEEKVESVKGMTLT 600
           AK +G+TEIK RSLLTS E++VTL L AGKPIYSPSF Y +LRR LP++KVE ++G++LT
Sbjct: 546 AKTAGFTEIKKRSLLTSMENYVTLHLEAGKPIYSPSFVYGLLRRVLPDDKVEMIEGLSLT 605

Query: 601 ADGYSAVFDVRTEDLDAFLAG-QGNVADVNLGVIKTLPKLQQREQSRGGRFSGGRGGFGD 660
           AD   AVFDV+  DLD F+AG Q +   ++L V+K +PKLQ+RE     RF GG  G   
Sbjct: 606 ADKTGAVFDVKQSDLDLFIAGAQKSAGSMSLEVVKVMPKLQEREPLPQKRFGGGGRG--- 665

Query: 661 RRFGGGGGSRFSGGRGGSRGGYNRFSGNSGGRGRNF 685
            RFGGGGG+RF GG G  RGG       SGGRG+ +
Sbjct: 666 NRFGGGGGNRFGGGGGRGRGG-------SGGRGQRY 671

[Close]

BLAST of Sed0020096 vs. TAIR 10
Match: AT5G26742.1 (DEAD box RNA helicase (RH3) )

HSP 1 Score: 323.6 bits (828), Expect = 4.0e-88
Identity = 236/626 (37.70%), Postives = 348/626 (55.59%), Query Frame = 0


Query: 84  VESDEDEVEKEVENPNSVVNFRISEPLKERLKEKGIMALFPIQAMTFEILFDGSDLVGRA 143
           ++ D + VE +     ++    + + L+E L+++GI  LFPIQ         G D++ RA
Sbjct: 87  LDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARA 146

Query: 144 RTGQGKTLAFVLPILESLINGPAKSSRVTGYGRSPSVIALLPTRELADQVFEDFQFYGQA 203
           +TG GKTLAF +PI++ L       +     GR P  + L PTRELA QV ++ +    A
Sbjct: 147 KTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIK--ESA 206

Query: 204 LGLDSCCLCGGMPYGPQENKLRRGVDIVIGTPGRIKDHINRNNIDLRTLKFRILDEADEM 263
             L + C+ GG+ Y  Q++ L RGVD+V+GTPGRI D I   ++ L  +++ +LDEAD+M
Sbjct: 207 PYLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQM 266

Query: 264 LRMGFVEDVEFILGKVADVNKVQTLLFSATLPDWVKNISSRFLKADKKTVDLVGNERMKA 323
           L +GF E VE IL  +    K Q++LFSAT+P WVK ++ ++L  +   +DLVG++  K 
Sbjct: 267 LAVGFEEAVESILENLP--TKRQSMLFSATMPTWVKKLARKYLD-NPLNIDLVGDQDEKL 326

Query: 324 SKDVRHIVIPCSDSERSRLIPDIIQCYSSGGQTIIFTERKESASELAGLLPGA---RALH 383
           ++ ++   I  + + +  ++ D+I  Y+ GG+TI+FT+ K  A E++  L  +    ALH
Sbjct: 327 AEGIKLYAIATTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALSNSIATEALH 386

Query: 384 GDIQQTQRQVTISAFKSAKFQVLVATNVAARGLDIDNVQLVIQCEAPKDTESYIHRSGRT 443
           GDI Q QR+ T++AF+  KF VLVAT+VA+RGLDI NV LVI  E P D E+++HRSGRT
Sbjct: 387 GDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRT 446

Query: 444 GRAGNTGVAVTLYEPRKSGSIFRIEREAGVKFEHLSAPQPVDIAKSAGASAAESVTQVSD 503
           GRAG  G A+ ++   +  ++  +ER+ G  FE +S P   D+ +S+      ++  V  
Sbjct: 447 GRAGKEGSAILMHTSSQKRTVRSLERDVGCHFEFISPPTVGDLLESSADQVVATLNGVHP 506

Query: 504 TVIPPFMSAAEELVKNSGLSALEIIAKSLAKISGYTE-IKSRSLLTSTEDHVTLMLGAGK 563
             I  F + A++L +  G  AL   A +LA +SG+++   SRSLL+  +  VTL L    
Sbjct: 507 DSIKFFSATAQKLYEEKGTDAL---AAALAHLSGFSQPPSSRSLLSHEKGWVTLQL---- 566

Query: 564 PIYSPSFAYSVLRR-----FLPE---EKVESVKGMTLTADG--YSAVFDVRTEDLDAFL- 623
            I  P+ A   L       FL +      + V  + L AD     AVFD+  E     L 
Sbjct: 567 -IRDPTNARGFLSARSVTGFLSDLYRTAADEVGKIFLIADDRIQGAVFDLPEEIAKELLE 626

Query: 624 --AGQGNVADVNLGVIKTLPKLQQREQSRG--GRFSGGRGGFGDRRFGGGGGSRFS-GGR 683
               +GN    +L +I  LP LQ    S    GRFS       DR   GGGGSR S GGR
Sbjct: 627 KDVPEGN----SLSMITKLPPLQDDGPSSDNYGRFSS-----RDRMPRGGGGSRGSRGGR 686

Query: 684 GGSRGGYNRFSGNSGGRGRNFSGGNS 690
           GGS  G + + G+     R  SGG S
Sbjct: 687 GGSSRGRDSWGGDDDRGSRRSSGGGS 690

[Close]

BLAST of Sed0020096 vs. TAIR 10
Match: AT5G26742.2 (DEAD box RNA helicase (RH3) )

HSP 1 Score: 323.6 bits (828), Expect = 4.0e-88
Identity = 236/626 (37.70%), Postives = 348/626 (55.59%), Query Frame = 0


Query: 84  VESDEDEVEKEVENPNSVVNFRISEPLKERLKEKGIMALFPIQAMTFEILFDGSDLVGRA 143
           ++ D + VE +     ++    + + L+E L+++GI  LFPIQ         G D++ RA
Sbjct: 87  LDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARA 146

Query: 144 RTGQGKTLAFVLPILESLINGPAKSSRVTGYGRSPSVIALLPTRELADQVFEDFQFYGQA 203
           +TG GKTLAF +PI++ L       +     GR P  + L PTRELA QV ++ +    A
Sbjct: 147 KTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIK--ESA 206

Query: 204 LGLDSCCLCGGMPYGPQENKLRRGVDIVIGTPGRIKDHINRNNIDLRTLKFRILDEADEM 263
             L + C+ GG+ Y  Q++ L RGVD+V+GTPGRI D I   ++ L  +++ +LDEAD+M
Sbjct: 207 PYLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQM 266

Query: 264 LRMGFVEDVEFILGKVADVNKVQTLLFSATLPDWVKNISSRFLKADKKTVDLVGNERMKA 323
           L +GF E VE IL  +    K Q++LFSAT+P WVK ++ ++L  +   +DLVG++  K 
Sbjct: 267 LAVGFEEAVESILENLP--TKRQSMLFSATMPTWVKKLARKYLD-NPLNIDLVGDQDEKL 326

Query: 324 SKDVRHIVIPCSDSERSRLIPDIIQCYSSGGQTIIFTERKESASELAGLLPGA---RALH 383
           ++ ++   I  + + +  ++ D+I  Y+ GG+TI+FT+ K  A E++  L  +    ALH
Sbjct: 327 AEGIKLYAIATTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALSNSIATEALH 386

Query: 384 GDIQQTQRQVTISAFKSAKFQVLVATNVAARGLDIDNVQLVIQCEAPKDTESYIHRSGRT 443
           GDI Q QR+ T++AF+  KF VLVAT+VA+RGLDI NV LVI  E P D E+++HRSGRT
Sbjct: 387 GDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRT 446

Query: 444 GRAGNTGVAVTLYEPRKSGSIFRIEREAGVKFEHLSAPQPVDIAKSAGASAAESVTQVSD 503
           GRAG  G A+ ++   +  ++  +ER+ G  FE +S P   D+ +S+      ++  V  
Sbjct: 447 GRAGKEGSAILMHTSSQKRTVRSLERDVGCHFEFISPPTVGDLLESSADQVVATLNGVHP 506

Query: 504 TVIPPFMSAAEELVKNSGLSALEIIAKSLAKISGYTE-IKSRSLLTSTEDHVTLMLGAGK 563
             I  F + A++L +  G  AL   A +LA +SG+++   SRSLL+  +  VTL L    
Sbjct: 507 DSIKFFSATAQKLYEEKGTDAL---AAALAHLSGFSQPPSSRSLLSHEKGWVTLQL---- 566

Query: 564 PIYSPSFAYSVLRR-----FLPE---EKVESVKGMTLTADG--YSAVFDVRTEDLDAFL- 623
            I  P+ A   L       FL +      + V  + L AD     AVFD+  E     L 
Sbjct: 567 -IRDPTNARGFLSARSVTGFLSDLYRTAADEVGKIFLIADDRIQGAVFDLPEEIAKELLE 626

Query: 624 --AGQGNVADVNLGVIKTLPKLQQREQSRG--GRFSGGRGGFGDRRFGGGGGSRFS-GGR 683
               +GN    +L +I  LP LQ    S    GRFS       DR   GGGGSR S GGR
Sbjct: 627 KDVPEGN----SLSMITKLPPLQDDGPSSDNYGRFSS-----RDRMPRGGGGSRGSRGGR 686

Query: 684 GGSRGGYNRFSGNSGGRGRNFSGGNS 690
           GGS  G + + G+     R  SGG S
Sbjct: 687 GGSSRGRDSWGGDDDRGSRRSSGGGS 690

[Close]

BLAST of Sed0020096 vs. TAIR 10
Match: AT3G22330.1 (putative mitochondrial RNA helicase 2 )

HSP 1 Score: 307.0 bits (785), Expect = 3.9e-83
Identity = 163/373 (43.70%), Postives = 239/373 (64.08%), Query Frame = 0


Query: 106 ISEPLKERLKEKGIMALFPIQAMTFEILFDGSDLVGRARTGQGKTLAFVLPILESLINGP 165
           IS  + + L  KGI  LFPIQ    E   +G D++GRARTG GKTLAF +PI++ +I   
Sbjct: 111 ISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKYN 170

Query: 166 AKSSRVTGYGRSPSVIALLPTRELADQVFEDFQFYGQALGLDSCCLCGGMPYGPQENKLR 225
           AK  R    GR+P  + L PTRELA QV ++F+    A  LD+ CL GG P G Q  +L 
Sbjct: 171 AKHGR----GRNPLCLVLAPTRELARQVEKEFR--ESAPSLDTICLYGGTPIGQQMRQLD 230

Query: 226 RGVDIVIGTPGRIKDHINRNNIDLRTLKFRILDEADEMLRMGFVEDVEFILGKVADVNKV 285
            GVD+ +GTPGR+ D + R  ++L  ++F +LDEAD+ML++GF EDVE IL K+ +  K 
Sbjct: 231 YGVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPE--KR 290

Query: 286 QTLLFSATLPDWVKNISSRFLKADKKTVDLVGNERMKASKDVRHIVIPCSDSERSRLIPD 345
           Q+++FSAT+P W+++++ ++L  +  TVDLVG+   K +  +    I      R+ +I  
Sbjct: 291 QSMMFSATMPSWIRSLTKKYLN-NPLTVDLVGDSDQKLADGITTYSIIADSYGRASIIGP 350

Query: 346 IIQCYSSGGQTIIFTERKESASELAGLLPGA---RALHGDIQQTQRQVTISAFKSAKFQV 405
           ++  ++ GG+ I+FT+ K  A  L+  L  +    ALHGDI Q+QR+ T++ F+   F +
Sbjct: 351 LVTEHAKGGKCIVFTQTKRDADRLSYALARSFKCEALHGDISQSQRERTLAGFRDGHFNI 410

Query: 406 LVATNVAARGLDIDNVQLVIQCEAPKDTESYIHRSGRTGRAGNTGVAVTLYEPRKSGSIF 465
           LVAT+VAARGLD+ NV L+I  E P +TE+++HR+GRTGRAG  G A+ +Y   +S ++ 
Sbjct: 411 LVATDVAARGLDVPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIYSQDQSRAVK 470

Query: 466 RIEREAGVKFEHL 476
            IERE G +F  L
Sbjct: 471 IIEREVGSRFTEL 474

[Close]

BLAST of Sed0020096 vs. TAIR 10
Match: AT5G26742.3 (DEAD box RNA helicase (RH3) )

HSP 1 Score: 306.2 bits (783), Expect = 6.6e-83
Identity = 223/574 (38.85%), Postives = 323/574 (56.27%), Query Frame = 0


Query: 136 GSDLVGRARTGQGKTLAFVLPILESLINGPAKSSRVTGYGRSPSVIALLPTRELADQVFE 195
           G D++ RA+TG GKTLAF +PI++ L       +     GR P  + L PTRELA QV +
Sbjct: 46  GRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEK 105

Query: 196 DFQFYGQALGLDSCCLCGGMPYGPQENKLRRGVDIVIGTPGRIKDHINRNNIDLRTLKFR 255
           + +    A  L + C+ GG+ Y  Q++ L RGVD+V+GTPGRI D I   ++ L  +++ 
Sbjct: 106 EIK--ESAPYLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYL 165

Query: 256 ILDEADEMLRMGFVEDVEFILGKVADVNKVQTLLFSATLPDWVKNISSRFLKADKKTVDL 315
           +LDEAD+ML +GF E VE IL  +    K Q++LFSAT+P WVK ++ ++L  +   +DL
Sbjct: 166 VLDEADQMLAVGFEEAVESILENLP--TKRQSMLFSATMPTWVKKLARKYLD-NPLNIDL 225

Query: 316 VGNERMKASKDVRHIVIPCSDSERSRLIPDIIQCYSSGGQTIIFTERKESASELAGLLPG 375
           VG++  K ++ ++   I  + + +  ++ D+I  Y+ GG+TI+FT+ K  A E++  L  
Sbjct: 226 VGDQDEKLAEGIKLYAIATTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALSN 285

Query: 376 A---RALHGDIQQTQRQVTISAFKSAKFQVLVATNVAARGLDIDNVQLVIQCEAPKDTES 435
           +    ALHGDI Q QR+ T++AF+  KF VLVAT+VA+RGLDI NV LVI  E P D E+
Sbjct: 286 SIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPET 345

Query: 436 YIHRSGRTGRAGNTGVAVTLYEPRKSGSIFRIEREAGVKFEHLSAPQPVDIAKSAGASAA 495
           ++HRSGRTGRAG  G A+ ++   +  ++  +ER+ G  FE +S P   D+ +S+     
Sbjct: 346 FVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERDVGCHFEFISPPTVGDLLESSADQVV 405

Query: 496 ESVTQVSDTVIPPFMSAAEELVKNSGLSALEIIAKSLAKISGYTE-IKSRSLLTSTEDHV 555
            ++  V    I  F + A++L +  G  AL   A +LA +SG+++   SRSLL+  +  V
Sbjct: 406 ATLNGVHPDSIKFFSATAQKLYEEKGTDAL---AAALAHLSGFSQPPSSRSLLSHEKGWV 465

Query: 556 TLMLGAGKPIYSPSFAYSVLRR-----FLPE---EKVESVKGMTLTADG--YSAVFDVRT 615
           TL L     I  P+ A   L       FL +      + V  + L AD     AVFD+  
Sbjct: 466 TLQL-----IRDPTNARGFLSARSVTGFLSDLYRTAADEVGKIFLIADDRIQGAVFDLPE 525

Query: 616 EDLDAFL---AGQGNVADVNLGVIKTLPKLQQREQSRG--GRFSGGRGGFGDRRFGGGGG 675
           E     L     +GN    +L +I  LP LQ    S    GRFS       DR   GGGG
Sbjct: 526 EIAKELLEKDVPEGN----SLSMITKLPPLQDDGPSSDNYGRFSS-----RDRMPRGGGG 585

Query: 676 SRFS-GGRGGSRGGYNRFSGNSGGRGRNFSGGNS 690
           SR S GGRGGS  G + + G+     R  SGG S
Sbjct: 586 SRGSRGGRGGSSRGRDSWGGDDDRGSRRSSGGGS 597

The following BLAST results are available for this feature:

BLAST of Sed0020096 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008467258.1	5.3e-310	82.14	PREDICTED: DEAD-box ATP-dependent RNA helicase 7 [Cucumis melo]	[more]
XP_023551208.1	1.1e-308	82.07	DEAD-box ATP-dependent RNA helicase 7-like [Cucurbita pepo subsp. pepo]	[more]
KAG6579664.1	5.2e-308	81.92	DEAD-box ATP-dependent RNA helicase 7, partial [Cucurbita argyrosperma subsp. so...	[more]
XP_022928900.1	8.9e-308	81.64	DEAD-box ATP-dependent RNA helicase 7-like [Cucurbita moschata]	[more]
XP_022957864.1	2.9e-306	82.08	DEAD-box ATP-dependent RNA helicase 7-like [Cucurbita moschata] >KAG6605682.1 DE...	[more]

BLAST of Sed0020096 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39189	7.0e-223	62.50	DEAD-box ATP-dependent RNA helicase 7 OS=Arabidopsis thaliana OX=3702 GN=RH7 PE=...	[more]
Q41382	1.8e-210	61.63	DEAD-box ATP-dependent RNA helicase 7 OS=Spinacia oleracea OX=3562 GN=RH7 PE=2 S...	[more]
Q650T9	6.8e-210	57.29	DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q3B8Q1	6.8e-109	39.31	Nucleolar RNA helicase 2 OS=Rattus norvegicus OX=10116 GN=Ddx21 PE=2 SV=1	[more]
Q9JIK5	1.2e-108	39.44	Nucleolar RNA helicase 2 OS=Mus musculus OX=10090 GN=Ddx21 PE=1 SV=3	[more]

BLAST of Sed0020096 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CTB6	2.6e-310	82.14	RNA helicase OS=Cucumis melo OX=3656 GN=LOC103504655 PE=3 SV=1	[more]
A0A6J1ESS9	4.3e-308	81.64	RNA helicase OS=Cucurbita moschata OX=3662 GN=LOC111435671 PE=3 SV=1	[more]
A0A6J1H389	1.4e-306	82.08	RNA helicase OS=Cucurbita moschata OX=3662 GN=LOC111459276 PE=3 SV=1	[more]
A0A6J1JZR9	1.2e-305	81.93	RNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111491171 PE=3 SV=1	[more]
A0A0A0KL93	3.4e-305	81.12	RNA helicase OS=Cucumis sativus OX=3659 GN=Csa_5G171750 PE=3 SV=1	[more]

BLAST of Sed0020096 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G62190.1	5.0e-224	62.50	DEAD box RNA helicase (PRH75)	[more]
AT5G26742.1	4.0e-88	37.70	DEAD box RNA helicase (RH3)	[more]
AT5G26742.2	4.0e-88	37.70	DEAD box RNA helicase (RH3)	[more]
AT3G22330.1	3.9e-83	43.70	putative mitochondrial RNA helicase 2	[more]
AT5G26742.3	6.6e-83	38.85	DEAD box RNA helicase (RH3)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 367..444 e-value: 2.8E-26 score: 103.3
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 344..444 e-value: 3.7E-26 score: 91.7
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 342..484 score: 20.14407
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 118..330 e-value: 2.1E-47 score: 173.4
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 130..312 score: 27.617098
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 322..550 e-value: 2.8E-44 score: 153.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 63..313 e-value: 5.5E-66 score: 224.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 178..464
IPR012562	GUCT	PFAM	PF08152	GUCT	coord: 534..629 e-value: 5.2E-26 score: 90.8
None	No IPR available	GENE3D	3.30.70.2280		coord: 551..623 e-value: 2.3E-11 score: 45.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 629..690
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 670..690
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..88
None	No IPR available	PANTHER	PTHR47958	ATP-DEPENDENT RNA HELICASE DBP3	coord: 27..664
None	No IPR available	PANTHER	PTHR47958:SF22	DEAD-BOX ATP-DEPENDENT RNA HELICASE 7	coord: 27..664
None	No IPR available	CDD	cd18787	SF2_C_DEAD	coord: 327..453 e-value: 9.46844E-48 score: 162.677
None	No IPR available	CDD	cd12937	GUCT_RH7_like	coord: 541..626 e-value: 1.09351E-32 score: 118.823
None	No IPR available	CDD	cd00268	DEADc	coord: 110..307 e-value: 7.78317E-85 score: 263.533
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 123..300 e-value: 5.9E-42 score: 143.4
IPR000629	ATP-dependent RNA helicase DEAD-box, conserved site	PROSITE	PS00039	DEAD_ATP_HELICASE	coord: 256..264
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 538..620

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0020096.1	Sed0020096.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003724	RNA helicase activity
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003676	nucleic acid binding