Sed0020080 (gene) Chayote v1

Overview
NameSed0020080
Typegene
OrganismSechium edule (Chayote v1)
DescriptionSquamosa promoter-binding-like protein
LocationLG10: 1754932 .. 1757005 (-)
RNA-Seq ExpressionSed0020080
SyntenySed0020080
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTTCTTCTCATAGGCTTCTCTGCAAAAATGGCGAACTCCATAGATCAAGTTTGGAGGGACGTGGTCGAAGAAGTGGAAGACGAAGATGATGATGCCGAAATAGAGTATGTAGAGGATGAGAAGAAGAAAAGAGCTGTAGGTAGTAGTGGTCGATGTGGAAGCGGAGGAGGAAGGACGTCGACCGTGGCGCGTTGCCAAGCCGATTGCTGCAATGCCGATCTGAGCAGCGCCAAGGCGTACCACCGCCGCCACAAGGTATGCGAGTTTCATGCCAAGGCGGCCGTGGTGATTTTGGCTGGATTGGAACAGCGCTTCTGCCAGCAGTGTAGTAGGTAAATCATTTTTATTTTCTTAAAAAACCCTAATTTGGATCTTGTAAATTAAACCCCCATTTGATAACTATTTGATTTTTTGTTTTTGGTTTATGAAATTTAAGCTTATTTTTACTCAAATTTCCTAACATGGGCTTCATTTTTCTTATAATGTATCCATATAAGAAACTACTTCCTAAATTTCAAAAACAAAAACAAGCTTTTGGAAACTACTTCTTTTTTTTCTTCTAAATTTTAATTTTGTTTATTAAAATATAGATAAGATGTAGATATCCAAATAAGGAAAAATGTACAGTATGATAGTTGTTGTAGGCTTAAATTTCATAAACAAAAAACGAAAAACAAAATAGTTATCAAACAGGACCCTAGTTAGTATTACTAATAGATTTGATCATTTTTCTTCTGTTTGTAGACTGTTAGAAATGAGCCCAAACGTAAATTGTTTGATTAATTTGCTTTGCTTTGGAACCATGTTTAGTAACTAACGCTTCAATAAATAATATATCGATTTTTTTTTTATTCGTGAGTGTCTGAATCAACTTATACATATAAAAACGATGCATCTAGAAATCCTTTATTCATGTCTAAAATCCTATTAGATCGATGACTACTTATAATGAGTACTTTATAAATTCTTTTTAATTAAAATGTTTGGATATATATAAAATATAGTATTAAAATTTAAAGATTACTCTCTTTAGGGGGAAATCATTTTTTTTTTACTCATGTATGAGTCAATTTGAAAATTTGAATTTTCTAGCTCATTAAATTAGATAATGAAATTATAATATTCTTTAAAATGACGTGTTGTACTAAAATAGTTAGCCAAGTTGTTTTACTATATATTAATTATATAACTAATGTCAAATCAAGATAGTAAAATACACCAGGTTAATATAGCTATAGCTAGTGACTATCATTTTTAAGGGCTCAAGGTAACAAGTTGTAATGAAAACAAAAATGCATGATATATAACATATTTGTCATATTTCAAAAGAATTAAACCAAATATAAAGATTCCAAAAAAAAAAAAAAACCAAATAATTGTGTTTTGAAGGTGGTGCAATTTTTAGAAAAAGAAATAGATTGATACAGATTAAAGAGGTTACATTAATTGCATAAATTTAATCTGATCTATTTGGGGTTTTTTTTTTCTTTTTTGAAAATAAATTGAAGGTGAAAGATTCAAATTTATAAGTTCTATATTAATGCTGCTGAGCTATTATTCTAAATGCAATTAACCGGTCTAATGGGTGTTATTAATATATATATATATATATTATAAGGTAAGTATTGTTTGTTTGTTAGTATTAGTTCTTTTCTTCAATTAATAGAAGAGATTCGAATCATGGGAACAGACTCTTGTTTTAATGGTGAAGTATTAGCTCTTGTAGTTAGGTTAAACACTCTTGATTGGTTTTTTTCCACTGATCAAGTTTTTTTAAACTTATTATCTGATTTACCCGTAATTTTTAATATTAATTTTGAAGAGGGAATATTGCAATATTCTCCAAGGATTAATATGGTGAAATTAGAAGTTAAAGTAGGGCTAGAAGAAAAGTTTTGTAAGATTAAAATGGATTTGGTATGTTTTTTTAATTTGTATAATAATTTCAGGTTTCATTCAGTAACGGAGTTCGATGACACAAAACGAAGCTGCCGAATGCGTTTGGCCGGACACAATGAACGGCGGCGAAAAAGCTTAACGGAGTTTCAGGGACATTCTTCCCTTGACCAATAA

mRNA sequence

GGTTCTTCTCATAGGCTTCTCTGCAAAAATGGCGAACTCCATAGATCAAGTTTGGAGGGACGTGGTCGAAGAAGTGGAAGACGAAGATGATGATGCCGAAATAGAGTATGTAGAGGATGAGAAGAAGAAAAGAGCTGTAGGTAGTAGTGGTCGATGTGGAAGCGGAGGAGGAAGGACGTCGACCGTGGCGCGTTGCCAAGCCGATTGCTGCAATGCCGATCTGAGCAGCGCCAAGGCGTACCACCGCCGCCACAAGGTATGCGAGTTTCATGCCAAGGCGGCCGTGGTGATTTTGGCTGGATTGGAACAGCGCTTCTGCCAGCAGTGTAGTAGGTTTCATTCAGTAACGGAGTTCGATGACACAAAACGAAGCTGCCGAATGCGTTTGGCCGGACACAATGAACGGCGGCGAAAAAGCTTAACGGAGTTTCAGGGACATTCTTCCCTTGACCAATAA

Coding sequence (CDS)

ATGGCGAACTCCATAGATCAAGTTTGGAGGGACGTGGTCGAAGAAGTGGAAGACGAAGATGATGATGCCGAAATAGAGTATGTAGAGGATGAGAAGAAGAAAAGAGCTGTAGGTAGTAGTGGTCGATGTGGAAGCGGAGGAGGAAGGACGTCGACCGTGGCGCGTTGCCAAGCCGATTGCTGCAATGCCGATCTGAGCAGCGCCAAGGCGTACCACCGCCGCCACAAGGTATGCGAGTTTCATGCCAAGGCGGCCGTGGTGATTTTGGCTGGATTGGAACAGCGCTTCTGCCAGCAGTGTAGTAGGTTTCATTCAGTAACGGAGTTCGATGACACAAAACGAAGCTGCCGAATGCGTTTGGCCGGACACAATGAACGGCGGCGAAAAAGCTTAACGGAGTTTCAGGGACATTCTTCCCTTGACCAATAA

Protein sequence

MANSIDQVWRDVVEEVEDEDDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVTEFDDTKRSCRMRLAGHNERRRKSLTEFQGHSSLDQ
Homology
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BLAST of Sed0020080 vs. NCBI nr
Match: XP_023004048.1 (squamosa promoter-binding-like protein 3 [Cucurbita maxima])

HSP 1 Score: 203.4 bits (516), Expect = 1.3e-48
Identity = 110/142 (77.46%), Postives = 121/142 (85.21%), Query Frame = 0 

Query: 1   MANSIDQVWRDVV---EEVEDEDDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQ 60
           M NS DQ W D V   EE E+EDDD E+ +VEDE+KKRAV SS R GSGGGRTS VARCQ
Sbjct: 1   MENSGDQGWGDPVEEEEEEEEEDDDDEVGFVEDERKKRAV-SSSRSGSGGGRTS-VARCQ 60

Query: 61  ADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVTEFDDTKRSCR 120
           AD CN DL+ A+AYHRRHKVCEFH+KAAVVILAGLEQRFCQQCSRFHSV+EFD+TKRSCR
Sbjct: 61  ADSCNVDLNGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQCSRFHSVSEFDETKRSCR 120

Query: 121 MRLAGHNERRRKSLTEFQGHSS 140
            RLAGHNERRRK+L +FQG SS
Sbjct: 121 RRLAGHNERRRKNLPDFQGQSS 140

[Close]
BLAST of Sed0020080 vs. NCBI nr
Match: XP_038880830.1 (squamosa promoter-binding protein 1-like [Benincasa hispida])

HSP 1 Score: 201.1 bits (510), Expect = 6.6e-48
Identity = 106/140 (75.71%), Postives = 118/140 (84.29%), Query Frame = 0 

Query: 1   MANSIDQVWRD-VVEEVEDEDDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQAD 60
           M NS DQVW D VVEE +D DD+ EI +VEDE+++R+  + GR GSGGGR  TVARCQAD
Sbjct: 1   MTNSEDQVWEDMVVEEDDDNDDNEEIGFVEDERRRRSALTGGRGGSGGGRV-TVARCQAD 60

Query: 61  CCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVTEFDDTKRSCRMR 120
            CNADLS A+ YHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFH+V+EFDDTKRSCR R
Sbjct: 61  GCNADLSCARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRRR 120

Query: 121 LAGHNERRRKSLTEFQGHSS 140
           LAGHNERRRK L +F G SS
Sbjct: 121 LAGHNERRRKILPDFHGQSS 139

[Close]
BLAST of Sed0020080 vs. NCBI nr
Match: XP_023518277.1 (squamosa promoter-binding-like protein 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 193.0 bits (489), Expect = 1.8e-45
Identity = 106/141 (75.18%), Postives = 117/141 (82.98%), Query Frame = 0 

Query: 1   MANSIDQVWRDVV--EEVEDEDDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQA 60
           M +S DQ W D V  EE EDEDDD EI +V+DE+KKRAV S  R G GGGRTS VARCQA
Sbjct: 1   MEHSGDQGWGDPVEEEEEEDEDDDDEIGFVKDERKKRAV-SGSRSGGGGGRTS-VARCQA 60

Query: 61  DCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVTEFDDTKRSCRM 120
           D CN DL+ A+AYHRRHKVCEFH+KAAVVILAGLEQRFCQQ  RFHSV+EFD+TKRSCR 
Sbjct: 61  DSCNVDLNGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQXIRFHSVSEFDETKRSCRR 120

Query: 121 RLAGHNERRRKSLTEFQGHSS 140
           RLAGHNERRRK+L +FQG SS
Sbjct: 121 RLAGHNERRRKNLPDFQGQSS 139

[Close]
BLAST of Sed0020080 vs. NCBI nr
Match: KAG7026565.1 (Squamosa promoter-binding protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 192.6 bits (488), Expect = 2.3e-45
Identity = 105/144 (72.92%), Postives = 118/144 (81.94%), Query Frame = 0 

Query: 1   MANSIDQVWRDVVEEVE-----DEDDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVAR 60
           M +S DQ W + VEE E     D+DDD EI +V+DE+KKRA  S  R GSGGGRTS V R
Sbjct: 1   MEHSGDQGWGEPVEEEEEEEEDDDDDDDEIGFVKDERKKRA-ASGSRSGSGGGRTS-VPR 60

Query: 61  CQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVTEFDDTKRS 120
           CQAD CN DL+ A+AYHRRHKVCEFH+KAAVVILAGLEQRFCQQCSRFHSV+EFD+TKRS
Sbjct: 61  CQADSCNVDLNGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQCSRFHSVSEFDETKRS 120

Query: 121 CRMRLAGHNERRRKSLTEFQGHSS 140
           CR RLAGHNERRRK+L +FQG SS
Sbjct: 121 CRRRLAGHNERRRKNLPDFQGQSS 142

[Close]
BLAST of Sed0020080 vs. NCBI nr
Match: XP_022926740.1 (squamosa promoter-binding-like protein 3 [Cucurbita moschata] >XP_022926741.1 squamosa promoter-binding-like protein 3 [Cucurbita moschata])

HSP 1 Score: 192.2 bits (487), Expect = 3.1e-45
Identity = 105/144 (72.92%), Postives = 118/144 (81.94%), Query Frame = 0 

Query: 1   MANSIDQVWRDVVEEVEDE-----DDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVAR 60
           M +S DQ W + VEE E+E     DDD EI +V+DE+KKRA  S  R GSGGGRTS V R
Sbjct: 1   MEHSGDQGWGEPVEEEEEEEEEEDDDDDEIGFVKDERKKRA-ASGSRSGSGGGRTS-VPR 60

Query: 61  CQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVTEFDDTKRS 120
           CQAD CN DL+ A+AYHRRHKVCEFH+KAAVVILAGLEQRFCQQCSRFHSV+EFD+TKRS
Sbjct: 61  CQADSCNVDLNGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQCSRFHSVSEFDETKRS 120

Query: 121 CRMRLAGHNERRRKSLTEFQGHSS 140
           CR RLAGHNERRRK+L +FQG SS
Sbjct: 121 CRRRLAGHNERRRKNLPDFQGQSS 142

[Close]
BLAST of Sed0020080 vs. ExPASy Swiss-Prot
Match: Q38741 (Squamosa promoter-binding protein 1 OS=Antirrhinum majus OX=4151 GN=SBP1 PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 2.9e-30
Identity = 72/117 (61.54%), Postives = 87/117 (74.36%), Query Frame = 0 

Query: 14  EEVEDEDDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQADCCNADLSSAKAYHR 73
           E+ E+EDD       ED KK RA+  SG+  SG    ST   CQ + C A++++AK YHR
Sbjct: 19  EQGEEEDDIG-----EDSKKTRALTPSGKRASG----STQRSCQVENCAAEMTNAKPYHR 78

Query: 74  RHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVTEFDDTKRSCRMRLAGHNERRRKS 131
           RHKVCEFHAKA VV+ +GL+QRFCQQCSRFH ++EFD+ KRSCR RLAGHNERRRKS
Sbjct: 79  RHKVCEFHAKAPVVLHSGLQQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKS 126

[Close]
BLAST of Sed0020080 vs. ExPASy Swiss-Prot
Match: P93015 (Squamosa promoter-binding-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=SPL3 PE=1 SV=2)

HSP 1 Score: 130.6 bits (327), Expect = 1.4e-29
Identity = 69/120 (57.50%), Postives = 84/120 (70.00%), Query Frame = 0 

Query: 14  EEVEDEDDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQADCCNADLSSAKAYHR 73
           EE EDED   E E +E ++K +A  SSG              CQ + C AD+S AK YH+
Sbjct: 25  EETEDEDTFEEEEALEKKQKGKATSSSG-------------VCQVESCTADMSKAKQYHK 84

Query: 74  RHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVTEFDDTKRSCRMRLAGHNERRRKSLTE 133
           RHKVC+FHAKA  V ++GL QRFCQQCSRFH+++EFD+ KRSCR RLAGHNERRRKS T+
Sbjct: 85  RHKVCQFHAKAPHVRISGLHQRFCQQCSRFHALSEFDEAKRSCRRRLAGHNERRRKSTTD 131

[Close]
BLAST of Sed0020080 vs. ExPASy Swiss-Prot
Match: Q9S7A9 (Squamosa promoter-binding-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=SPL4 PE=1 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.7e-28
Identity = 66/116 (56.90%), Postives = 79/116 (68.10%), Query Frame = 0 

Query: 18  DEDDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQADCCNADLSSAKAYHRRHKV 77
           +ED + + +  E+  + R  GS G    GG    ++  CQ D C AD+  AK YHRRHKV
Sbjct: 20  EEDMETDTDEEEEVGRDRVRGSRGSINRGG----SLRLCQVDRCTADMKEAKLYHRRHKV 79

Query: 78  CEFHAKAAVVILAGLEQRFCQQCSRFHSVTEFDDTKRSCRMRLAGHNERRRKSLTE 134
           CE HAKA+ V L+GL QRFCQQCSRFH + EFD+ KRSCR RLAGHNERRRKS  E
Sbjct: 80  CEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNERRRKSSGE 131

[Close]
BLAST of Sed0020080 vs. ExPASy Swiss-Prot
Match: Q8GXL3 (Squamosa promoter-binding-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=SPL8 PE=1 SV=2)

HSP 1 Score: 124.0 bits (310), Expect = 1.3e-27
Identity = 59/85 (69.41%), Postives = 68/85 (80.00%), Query Frame = 0 

Query: 45  SGGGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFH 104
           SG   + +  RCQA+ CNADLS AK YHRRHKVCEFH+KA+ V+ AGL QRFCQQCSRFH
Sbjct: 177 SGMANSLSTPRCQAEGCNADLSHAKHYHRRHKVCEFHSKASTVVAAGLSQRFCQQCSRFH 236

Query: 105 SVTEFDDTKRSCRMRLAGHNERRRK 130
            ++EFD+ KRSCR RLA HN RRRK
Sbjct: 237 LLSEFDNGKRSCRKRLADHNRRRRK 261

[Close]
BLAST of Sed0020080 vs. ExPASy Swiss-Prot
Match: A2YFT9 (Squamosa promoter-binding-like protein 10 OS=Oryza sativa subsp. indica OX=39946 GN=SPL10 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 8.7e-27
Identity = 58/83 (69.88%), Postives = 65/83 (78.31%), Query Frame = 0 

Query: 47  GGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSV 106
           GG      RCQA+ C ADLS AK YHRRHKVCE+HAKA+VV  +G +QRFCQQCSRFH +
Sbjct: 172 GGAHHQPPRCQAEGCKADLSGAKHYHRRHKVCEYHAKASVVAASGKQQRFCQQCSRFHVL 231

Query: 107 TEFDDTKRSCRMRLAGHNERRRK 130
           TEFD+ KRSCR RLA HN RRRK
Sbjct: 232 TEFDEAKRSCRKRLAEHNRRRRK 254

[Close]
BLAST of Sed0020080 vs. ExPASy TrEMBL
Match: A0A6J1KYC6 (Squamosa promoter-binding-like protein OS=Cucurbita maxima OX=3661 GN=LOC111497471 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 6.4e-49
Identity = 110/142 (77.46%), Postives = 121/142 (85.21%), Query Frame = 0 

Query: 1   MANSIDQVWRDVV---EEVEDEDDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQ 60
           M NS DQ W D V   EE E+EDDD E+ +VEDE+KKRAV SS R GSGGGRTS VARCQ
Sbjct: 1   MENSGDQGWGDPVEEEEEEEEEDDDDEVGFVEDERKKRAV-SSSRSGSGGGRTS-VARCQ 60

Query: 61  ADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVTEFDDTKRSCR 120
           AD CN DL+ A+AYHRRHKVCEFH+KAAVVILAGLEQRFCQQCSRFHSV+EFD+TKRSCR
Sbjct: 61  ADSCNVDLNGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQCSRFHSVSEFDETKRSCR 120

Query: 121 MRLAGHNERRRKSLTEFQGHSS 140
            RLAGHNERRRK+L +FQG SS
Sbjct: 121 RRLAGHNERRRKNLPDFQGQSS 140

[Close]
BLAST of Sed0020080 vs. ExPASy TrEMBL
Match: A0A6J1EFR3 (Squamosa promoter-binding-like protein OS=Cucurbita moschata OX=3662 GN=LOC111433770 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.5e-45
Identity = 105/144 (72.92%), Postives = 118/144 (81.94%), Query Frame = 0 

Query: 1   MANSIDQVWRDVVEEVEDE-----DDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVAR 60
           M +S DQ W + VEE E+E     DDD EI +V+DE+KKRA  S  R GSGGGRTS V R
Sbjct: 1   MEHSGDQGWGEPVEEEEEEEEEEDDDDDEIGFVKDERKKRA-ASGSRSGSGGGRTS-VPR 60

Query: 61  CQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVTEFDDTKRS 120
           CQAD CN DL+ A+AYHRRHKVCEFH+KAAVVILAGLEQRFCQQCSRFHSV+EFD+TKRS
Sbjct: 61  CQADSCNVDLNGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQCSRFHSVSEFDETKRS 120

Query: 121 CRMRLAGHNERRRKSLTEFQGHSS 140
           CR RLAGHNERRRK+L +FQG SS
Sbjct: 121 CRRRLAGHNERRRKNLPDFQGQSS 142

[Close]
BLAST of Sed0020080 vs. ExPASy TrEMBL
Match: A0A0A0KK74 (SBP-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G517960 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 7.4e-45
Identity = 98/140 (70.00%), Postives = 120/140 (85.71%), Query Frame = 0 

Query: 1   MANSIDQVWRD-VVEEVEDEDDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQAD 60
           MANS DQ W D +V++ +D++D+ EI +V++E+++R+  +S R G GGGR STVARCQAD
Sbjct: 1   MANSEDQGWEDMIVDDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGR-STVARCQAD 60

Query: 61  CCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVTEFDDTKRSCRMR 120
            CNADL+ AK YHRRHKVCEFH++AAVVILAGLEQRFCQQCSRFH+++EFDDTKRSCRMR
Sbjct: 61  GCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSRFHALSEFDDTKRSCRMR 120

Query: 121 LAGHNERRRKSLTEFQGHSS 140
           LAGHNERRRK L +F G SS
Sbjct: 121 LAGHNERRRKILPDFHGQSS 139

[Close]
BLAST of Sed0020080 vs. ExPASy TrEMBL
Match: A0A1S3AZN8 (squamosa promoter-binding protein 1 OS=Cucumis melo OX=3656 GN=LOC103484510 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 3.7e-44
Identity = 97/141 (68.79%), Postives = 118/141 (83.69%), Query Frame = 0 

Query: 1   MANSIDQVWRDVVEEVEDEDDD--AEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQA 60
           MANS D  W D++ + +D+DD+   E+ +V++E+++R+  ++GR G GGGR STVARCQA
Sbjct: 1   MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGR-STVARCQA 60

Query: 61  DCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVTEFDDTKRSCRM 120
           D CNADL+ A+ YHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFH+V+EFDDTKRSCR 
Sbjct: 61  DGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRS 120

Query: 121 RLAGHNERRRKSLTEFQGHSS 140
           RLAGHNERRRK L +F G SS
Sbjct: 121 RLAGHNERRRKILPDFHGQSS 140

[Close]
BLAST of Sed0020080 vs. ExPASy TrEMBL
Match: A0A6J1CK81 (squamosa promoter-binding protein 1 OS=Momordica charantia OX=3673 GN=LOC111012368 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 7.9e-39
Identity = 95/130 (73.08%), Postives = 104/130 (80.00%), Query Frame = 0 

Query: 11  DVVEEVEDEDDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQADCCNADLSSAKA 70
           D  EE ED     E+ + E+E+K R   S GRCG G GR STVARCQAD CNADLS A+ 
Sbjct: 11  DEEEEEEDGGGGGEVGFGEEERKIRRALSGGRCG-GAGR-STVARCQADGCNADLSGARP 70

Query: 71  YHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVTEFDDTKRSCRMRLAGHNERRRKS 130
           YHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFH+V+EFD+TKRSCR RLAGHNERRRKS
Sbjct: 71  YHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRRRLAGHNERRRKS 130

Query: 131 L-TEFQGHSS 140
           L +EF G  S
Sbjct: 131 LSSEFHGGQS 138

[Close]
BLAST of Sed0020080 vs. TAIR 10
Match: AT2G33810.1 (squamosa promoter binding protein-like 3 )

HSP 1 Score: 130.6 bits (327), Expect = 1.0e-30
Identity = 69/120 (57.50%), Postives = 84/120 (70.00%), Query Frame = 0 

Query: 14  EEVEDEDDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQADCCNADLSSAKAYHR 73
           EE EDED   E E +E ++K +A  SSG              CQ + C AD+S AK YH+
Sbjct: 25  EETEDEDTFEEEEALEKKQKGKATSSSG-------------VCQVESCTADMSKAKQYHK 84

Query: 74  RHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVTEFDDTKRSCRMRLAGHNERRRKSLTE 133
           RHKVC+FHAKA  V ++GL QRFCQQCSRFH+++EFD+ KRSCR RLAGHNERRRKS T+
Sbjct: 85  RHKVCQFHAKAPHVRISGLHQRFCQQCSRFHALSEFDEAKRSCRRRLAGHNERRRKSTTD 131

[Close]
BLAST of Sed0020080 vs. TAIR 10
Match: AT1G53160.2 (squamosa promoter binding protein-like 4 )

HSP 1 Score: 126.3 bits (316), Expect = 1.9e-29
Identity = 66/116 (56.90%), Postives = 79/116 (68.10%), Query Frame = 0 

Query: 18  DEDDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQADCCNADLSSAKAYHRRHKV 77
           +ED + + +  E+  + R  GS G    GG    ++  CQ D C AD+  AK YHRRHKV
Sbjct: 20  EEDMETDTDEEEEVGRDRVRGSRGSINRGG----SLRLCQVDRCTADMKEAKLYHRRHKV 79

Query: 78  CEFHAKAAVVILAGLEQRFCQQCSRFHSVTEFDDTKRSCRMRLAGHNERRRKSLTE 134
           CE HAKA+ V L+GL QRFCQQCSRFH + EFD+ KRSCR RLAGHNERRRKS  E
Sbjct: 80  CEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNERRRKSSGE 131

[Close]
BLAST of Sed0020080 vs. TAIR 10
Match: AT1G53160.1 (squamosa promoter binding protein-like 4 )

HSP 1 Score: 126.3 bits (316), Expect = 1.9e-29
Identity = 66/116 (56.90%), Postives = 79/116 (68.10%), Query Frame = 0 

Query: 18  DEDDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQADCCNADLSSAKAYHRRHKV 77
           +ED + + +  E+  + R  GS G    GG    ++  CQ D C AD+  AK YHRRHKV
Sbjct: 20  EEDMETDTDEEEEVGRDRVRGSRGSINRGG----SLRLCQVDRCTADMKEAKLYHRRHKV 79

Query: 78  CEFHAKAAVVILAGLEQRFCQQCSRFHSVTEFDDTKRSCRMRLAGHNERRRKSLTE 134
           CE HAKA+ V L+GL QRFCQQCSRFH + EFD+ KRSCR RLAGHNERRRKS  E
Sbjct: 80  CEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNERRRKSSGE 131

[Close]
BLAST of Sed0020080 vs. TAIR 10
Match: AT1G02065.1 (squamosa promoter binding protein-like 8 )

HSP 1 Score: 124.0 bits (310), Expect = 9.5e-29
Identity = 59/85 (69.41%), Postives = 68/85 (80.00%), Query Frame = 0 

Query: 45  SGGGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFH 104
           SG   + +  RCQA+ CNADLS AK YHRRHKVCEFH+KA+ V+ AGL QRFCQQCSRFH
Sbjct: 177 SGMANSLSTPRCQAEGCNADLSHAKHYHRRHKVCEFHSKASTVVAAGLSQRFCQQCSRFH 236

Query: 105 SVTEFDDTKRSCRMRLAGHNERRRK 130
            ++EFD+ KRSCR RLA HN RRRK
Sbjct: 237 LLSEFDNGKRSCRKRLADHNRRRRK 261

[Close]
BLAST of Sed0020080 vs. TAIR 10
Match: AT3G60030.1 (squamosa promoter-binding protein-like 12 )

HSP 1 Score: 117.9 bits (294), Expect = 6.8e-27
Identity = 56/94 (59.57%), Postives = 67/94 (71.28%), Query Frame = 0 

Query: 46  GGGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHS 105
           GGG  S    CQ D C ADLS  K YHRRHKVCE H+KA   ++ G+ QRFCQQCSRFH 
Sbjct: 117 GGGIPSRAICCQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHV 176

Query: 106 VTEFDDTKRSCRMRLAGHNERRRKSLTEFQGHSS 140
           + EFD+ KRSCR RLAGHN+RRRK+  +  G+ +
Sbjct: 177 LEEFDEGKRSCRRRLAGHNKRRRKANPDTIGNGT 210

The following BLAST results are available for this feature:
BLAST of Sed0020080 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023004048.11.3e-4877.46squamosa promoter-binding-like protein 3 [Cucurbita maxima][more]
XP_038880830.16.6e-4875.71squamosa promoter-binding protein 1-like [Benincasa hispida][more]
XP_023518277.11.8e-4575.18squamosa promoter-binding-like protein 3 [Cucurbita pepo subsp. pepo][more]
KAG7026565.12.3e-4572.92Squamosa promoter-binding protein 1, partial [Cucurbita argyrosperma subsp. argy... [more]
XP_022926740.13.1e-4572.92squamosa promoter-binding-like protein 3 [Cucurbita moschata] >XP_022926741.1 sq... [more]
BLAST of Sed0020080 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q387412.9e-3061.54Squamosa promoter-binding protein 1 OS=Antirrhinum majus OX=4151 GN=SBP1 PE=2 SV... [more]
P930151.4e-2957.50Squamosa promoter-binding-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=SPL3... [more]
Q9S7A92.7e-2856.90Squamosa promoter-binding-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=SPL4... [more]
Q8GXL31.3e-2769.41Squamosa promoter-binding-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=SPL8... [more]
A2YFT98.7e-2769.88Squamosa promoter-binding-like protein 10 OS=Oryza sativa subsp. indica OX=39946... [more]
BLAST of Sed0020080 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KYC66.4e-4977.46Squamosa promoter-binding-like protein OS=Cucurbita maxima OX=3661 GN=LOC1114974... [more]
A0A6J1EFR31.5e-4572.92Squamosa promoter-binding-like protein OS=Cucurbita moschata OX=3662 GN=LOC11143... [more]
A0A0A0KK747.4e-4570.00SBP-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G517960 PE... [more]
A0A1S3AZN83.7e-4468.79squamosa promoter-binding protein 1 OS=Cucumis melo OX=3656 GN=LOC103484510 PE=4... [more]
A0A6J1CK817.9e-3973.08squamosa promoter-binding protein 1 OS=Momordica charantia OX=3673 GN=LOC1110123... [more]
BLAST of Sed0020080 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G33810.11.0e-3057.50squamosa promoter binding protein-like 3 [more]
AT1G53160.21.9e-2956.90squamosa promoter binding protein-like 4 [more]
AT1G53160.11.9e-2956.90squamosa promoter binding protein-like 4 [more]
AT1G02065.19.5e-2969.41squamosa promoter binding protein-like 8 [more]
AT3G60030.16.8e-2759.57squamosa promoter-binding protein-like 12 [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 13..33
NoneNo IPR availablePIRSRPIRSR037575-1PIRSR037575-1coord: 48..130
e-value: 4.1E-42
score: 140.4
IPR036893SBP domain superfamilyGENE3D4.10.1100.10coord: 51..117
e-value: 5.3E-32
score: 111.8
IPR036893SBP domain superfamilySUPERFAMILY103612SBT domaincoord: 54..134
IPR004333SBP domainPFAMPF03110SBPcoord: 56..129
e-value: 4.7E-31
score: 106.9
IPR004333SBP domainPROSITEPS51141ZF_SBPcoord: 53..130
score: 31.239601
IPR044817Squamosa promoter-binding-like proteinPANTHERPTHR31251SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4coord: 36..130

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0020080.1Sed0020080.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009908 flower development
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0046872 metal ion binding