Sed0020039 (gene) Chayote v1

Overview


Name	Sed0020039
Type	gene
Organism	Sechium edule (Chayote v1)
Description	PMD domain-containing protein
Location	LG05: 26357599 .. 26358282 (-)
RNA-Seq Expression	Sed0020039
Synteny	Sed0020039

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGCATTTTGCTGAACGCGTTACCTCCGGGTTGAAGTATTTGGTGATTTTGAAGGATAAAGAGCAGTTAATTAAGGATGGATTGTCTTTACTTGCTGAAGAGCCCTTAGCTAGTACTCTTTCCCCTACATGGCAACACCTGAATGTCAAGTTTTTGTCTGAACTATCAAGAGAGTTACCCTTTGAAGGCAATGATAAAGCTTGGGTCTTAAAATCTTCAATGCATGGTCGAAATTATAATGAAGACCCCGAACTAACATTAGGGCGTCGCTTGATCGAAGGTGAAACTCATTGGAATACCATTATGAAGATTCATGGTGATTGGTCTTTCATTGATTTTTATTGGGAATGGCTAGAATTTGTCGTTGGTCGTAATGAAAAAGTGTTTAACCAGAATCGCTTACGTAATGTGGTGATGGCTTCTCTCTATACTTATGATCATTGTAATGATGTGGTTCGTGCTTTCTGTGAAGGTTGGTGCCCCCGGACGAATACCCTTTTTACCGCAATGGGTGAAGTCTCTATCTCGTTATGGGATTTATGGGATATTTGTGGTCTTCCTATCAAAGGAAGATTTTATGAAGAGGTTATTCCGACTCTACAAGAGTCGATGAATATCGAGGTAACTATAAGGTTCTCCCTAAAAGTTGTGAACACCTATTCCACGCATATTATAAGATAG

mRNA sequence

ATGGTGCATTTTGCTGAACGCGTTACCTCCGGGTTGAAGTATTTGGTGATTTTGAAGGATAAAGAGCAGTTAATTAAGGATGGATTGTCTTTACTTGCTGAAGAGCCCTTAGCTAGTACTCTTTCCCCTACATGGCAACACCTGAATGTCAAGTTTTTGTCTGAACTATCAAGAGAGTTACCCTTTGAAGGCAATGATAAAGCTTGGGTCTTAAAATCTTCAATGCATGGTCGAAATTATAATGAAGACCCCGAACTAACATTAGGGCGTCGCTTGATCGAAGGTGAAACTCATTGGAATACCATTATGAAGATTCATGGTGATTGGTCTTTCATTGATTTTTATTGGGAATGGCTAGAATTTGTCGTTGGTCGTAATGAAAAAGTGTTTAACCAGAATCGCTTACGTAATGTGGTGATGGCTTCTCTCTATACTTATGATCATTGTAATGATGTGGTTCGTGCTTTCTGTGAAGGTTGGTGCCCCCGGACGAATACCCTTTTTACCGCAATGGGTGAAGTCTCTATCTCGTTATGGGATTTATGGGATATTTGTGGTCTTCCTATCAAAGGAAGATTTTATGAAGAGGTTATTCCGACTCTACAAGAGTCGATGAATATCGAGGTAACTATAAGGTTCTCCCTAAAAGTTGTGAACACCTATTCCACGCATATTATAAGATAG

Coding sequence (CDS)

ATGGTGCATTTTGCTGAACGCGTTACCTCCGGGTTGAAGTATTTGGTGATTTTGAAGGATAAAGAGCAGTTAATTAAGGATGGATTGTCTTTACTTGCTGAAGAGCCCTTAGCTAGTACTCTTTCCCCTACATGGCAACACCTGAATGTCAAGTTTTTGTCTGAACTATCAAGAGAGTTACCCTTTGAAGGCAATGATAAAGCTTGGGTCTTAAAATCTTCAATGCATGGTCGAAATTATAATGAAGACCCCGAACTAACATTAGGGCGTCGCTTGATCGAAGGTGAAACTCATTGGAATACCATTATGAAGATTCATGGTGATTGGTCTTTCATTGATTTTTATTGGGAATGGCTAGAATTTGTCGTTGGTCGTAATGAAAAAGTGTTTAACCAGAATCGCTTACGTAATGTGGTGATGGCTTCTCTCTATACTTATGATCATTGTAATGATGTGGTTCGTGCTTTCTGTGAAGGTTGGTGCCCCCGGACGAATACCCTTTTTACCGCAATGGGTGAAGTCTCTATCTCGTTATGGGATTTATGGGATATTTGTGGTCTTCCTATCAAAGGAAGATTTTATGAAGAGGTTATTCCGACTCTACAAGAGTCGATGAATATCGAGGTAACTATAAGGTTCTCCCTAAAAGTTGTGAACACCTATTCCACGCATATTATAAGATAG

Protein sequence

MVHFAERVTSGLKYLVILKDKEQLIKDGLSLLAEEPLASTLSPTWQHLNVKFLSELSRELPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHWNTIMKIHGDWSFIDFYWEWLEFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIPTLQESMNIEVTIRFSLKVVNTYSTHIIR

Homology

[Close]

BLAST of Sed0020039 vs. NCBI nr
Match: KAA0047478.1 (hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa])

HSP 1 Score: 234.6 bits (597), Expect = 8.6e-58
Identity = 113/204 (55.39%), Postives = 137/204 (67.16%), Query Frame = 0


Query: 1   MVHFAERVTSGLKYLVILKDKEQLIKDGLSLLAEEPLASTLSPTWQHL-NVKFLSELSRE 60
           MV+F ER  SG+++LVIL D+ Q  +DGLSL+ E+P A   +  W  L N   L  LS E
Sbjct: 1   MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVE 60

Query: 61  LPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHWNTIMKIHGDWSFIDFYWEWL 120
           +P      AWVL+SS+H    N    LTLG+RLIEG+T W T+ K+ G++ F D YWEWL
Sbjct: 61  VPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFTDCYWEWL 120

Query: 121 EFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLW 180
           E VVGRN ++    RL   V ASLYTYD  +DVVRAFCE WCP TNTL T  GE+SISLW
Sbjct: 121 ELVVGRNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSISLW 180

Query: 181 DLWDICGLPIKGRFYEEVIPTLQE 204
           DLW   GLPIKG FYEE IP+ +E
Sbjct: 181 DLWSFGGLPIKGDFYEERIPSFKE 204

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BLAST of Sed0020039 vs. NCBI nr
Match: TYK02261.1 (hypothetical protein E5676_scaffold18G00620 [Cucumis melo var. makuwa])

HSP 1 Score: 232.6 bits (592), Expect = 3.3e-57
Identity = 111/204 (54.41%), Postives = 136/204 (66.67%), Query Frame = 0


Query: 1   MVHFAERVTSGLKYLVILKDKEQLIKDGLSLLAEEPLASTLSPTWQHL-NVKFLSELSRE 60
           MV+F ER  SG+++LVIL D+ QL +DGLSL+ E+P A   +  W  L N   L  L  E
Sbjct: 16  MVYFTERFLSGVRHLVILSDRNQLREDGLSLIVEKPWAGAFADHWSRLDNNSVLPRLFVE 75

Query: 61  LPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHWNTIMKIHGDWSFIDFYWEWL 120
           +P      AWVL+SS+H    N    LTLG+RLIEG+T W T++K+ G++ F D YWEWL
Sbjct: 76  VPLSEEKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVIKVPGEFCFTDCYWEWL 135

Query: 121 EFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLW 180
           E VVG+N ++     L   V ASLYTYD   DVVRAFCE WCP TNTL T  GE+SISLW
Sbjct: 136 ELVVGQNSRLLYSTHLYGTVTASLYTYDRNGDVVRAFCEAWCPSTNTLHTMAGELSISLW 195

Query: 181 DLWDICGLPIKGRFYEEVIPTLQE 204
           DLW   GLPIKG FYEE IP+ +E
Sbjct: 196 DLWSFGGLPIKGDFYEERIPSFKE 219

[Close]

BLAST of Sed0020039 vs. NCBI nr
Match: KAA0060611.1 (hypothetical protein E6C27_scaffold22G004890 [Cucumis melo var. makuwa])

HSP 1 Score: 232.6 bits (592), Expect = 3.3e-57
Identity = 111/204 (54.41%), Postives = 136/204 (66.67%), Query Frame = 0


Query: 1   MVHFAERVTSGLKYLVILKDKEQLIKDGLSLLAEEPLASTLSPTWQHL-NVKFLSELSRE 60
           MV+F ER  SG+++LVIL D+ QL +DGLSL+ E+P A   +  W  L N   L  L  E
Sbjct: 16  MVYFTERFLSGVRHLVILSDRNQLREDGLSLIVEKPWAGAFADHWSRLDNNSVLPRLFVE 75

Query: 61  LPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHWNTIMKIHGDWSFIDFYWEWL 120
           +P      AWVL+SS+H    N    LTLG+RLIEG+T W T++K+ G++ F D YWEWL
Sbjct: 76  VPLSEEKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVIKVPGEFCFTDCYWEWL 135

Query: 121 EFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLW 180
           E VVG+N ++     L   V ASLYTYD   DVVRAFCE WCP TNTL T  GE+SISLW
Sbjct: 136 ELVVGQNSRLLYSTHLYGTVTASLYTYDRNGDVVRAFCEAWCPSTNTLHTMAGELSISLW 195

Query: 181 DLWDICGLPIKGRFYEEVIPTLQE 204
           DLW   GLPIKG FYEE IP+ +E
Sbjct: 196 DLWSFGGLPIKGDFYEERIPSFKE 219

[Close]

BLAST of Sed0020039 vs. NCBI nr
Match: TYK19639.1 (hypothetical protein E5676_scaffold242G00260 [Cucumis melo var. makuwa])

HSP 1 Score: 232.3 bits (591), Expect = 4.3e-57
Identity = 112/204 (54.90%), Postives = 138/204 (67.65%), Query Frame = 0


Query: 1   MVHFAERVTSGLKYLVILKDKEQLIKDGLSLLAEEPLASTLSPTWQHL-NVKFLSELSRE 60
           MV+F ER  SG+++LVIL D+ Q  +DGLSL+ E+  A   +  W  L N   L  LS E
Sbjct: 1   MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKLWAGAFADHWPRLDNNSVLPRLSVE 60

Query: 61  LPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHWNTIMKIHGDWSFIDFYWEWL 120
           +P      AWVL+SS+H    N    LTLG+RLIEG+T W T+ K+ G++ F D YWEWL
Sbjct: 61  VPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFTDCYWEWL 120

Query: 121 EFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLW 180
           E VVGRN ++     L +VV ASLYTYD  +DVVRAFCE WCP TNTL T  GE+SISLW
Sbjct: 121 ELVVGRNTRLLYSTHLYSVVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSISLW 180

Query: 181 DLWDICGLPIKGRFYEEVIPTLQE 204
           DLW   GLPIKG FYEE+IP+ +E
Sbjct: 181 DLWSFRGLPIKGDFYEEMIPSFKE 204

[Close]

BLAST of Sed0020039 vs. NCBI nr
Match: KAA0041618.1 (hypothetical protein E6C27_scaffold93G00910 [Cucumis melo var. makuwa])

HSP 1 Score: 232.3 bits (591), Expect = 4.3e-57
Identity = 112/204 (54.90%), Postives = 138/204 (67.65%), Query Frame = 0


Query: 1   MVHFAERVTSGLKYLVILKDKEQLIKDGLSLLAEEPLASTLSPTWQHL-NVKFLSELSRE 60
           MV+F ER  SG+++LVIL D+ Q  +DGLSL+ E+  A   +  W  L N   L  LS E
Sbjct: 17  MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKLWAGAFADHWPRLDNNSVLPRLSVE 76

Query: 61  LPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHWNTIMKIHGDWSFIDFYWEWL 120
           +P      AWVL+SS+H    N    LTLG+RLIEG+T W T+ K+ G++ F D YWEWL
Sbjct: 77  VPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFTDCYWEWL 136

Query: 121 EFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLW 180
           E VVGRN ++     L +VV ASLYTYD  +DVVRAFCE WCP TNTL T  GE+SISLW
Sbjct: 137 ELVVGRNTRLLYSTHLYSVVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSISLW 196

Query: 181 DLWDICGLPIKGRFYEEVIPTLQE 204
           DLW   GLPIKG FYEE+IP+ +E
Sbjct: 197 DLWSFRGLPIKGDFYEEMIPSFKE 220

[Close]

BLAST of Sed0020039 vs. ExPASy TrEMBL
Match: A0A5A7TX42 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00950 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 4.2e-58
Identity = 113/204 (55.39%), Postives = 137/204 (67.16%), Query Frame = 0


Query: 1   MVHFAERVTSGLKYLVILKDKEQLIKDGLSLLAEEPLASTLSPTWQHL-NVKFLSELSRE 60
           MV+F ER  SG+++LVIL D+ Q  +DGLSL+ E+P A   +  W  L N   L  LS E
Sbjct: 1   MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVE 60

Query: 61  LPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHWNTIMKIHGDWSFIDFYWEWL 120
           +P      AWVL+SS+H    N    LTLG+RLIEG+T W T+ K+ G++ F D YWEWL
Sbjct: 61  VPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFTDCYWEWL 120

Query: 121 EFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLW 180
           E VVGRN ++    RL   V ASLYTYD  +DVVRAFCE WCP TNTL T  GE+SISLW
Sbjct: 121 ELVVGRNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSISLW 180

Query: 181 DLWDICGLPIKGRFYEEVIPTLQE 204
           DLW   GLPIKG FYEE IP+ +E
Sbjct: 181 DLWSFGGLPIKGDFYEERIPSFKE 204

[Close]

BLAST of Sed0020039 vs. ExPASy TrEMBL
Match: A0A5A7V4F4 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G004890 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 1.6e-57
Identity = 111/204 (54.41%), Postives = 136/204 (66.67%), Query Frame = 0


Query: 1   MVHFAERVTSGLKYLVILKDKEQLIKDGLSLLAEEPLASTLSPTWQHL-NVKFLSELSRE 60
           MV+F ER  SG+++LVIL D+ QL +DGLSL+ E+P A   +  W  L N   L  L  E
Sbjct: 16  MVYFTERFLSGVRHLVILSDRNQLREDGLSLIVEKPWAGAFADHWSRLDNNSVLPRLFVE 75

Query: 61  LPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHWNTIMKIHGDWSFIDFYWEWL 120
           +P      AWVL+SS+H    N    LTLG+RLIEG+T W T++K+ G++ F D YWEWL
Sbjct: 76  VPLSEEKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVIKVPGEFCFTDCYWEWL 135

Query: 121 EFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLW 180
           E VVG+N ++     L   V ASLYTYD   DVVRAFCE WCP TNTL T  GE+SISLW
Sbjct: 136 ELVVGQNSRLLYSTHLYGTVTASLYTYDRNGDVVRAFCEAWCPSTNTLHTMAGELSISLW 195

Query: 181 DLWDICGLPIKGRFYEEVIPTLQE 204
           DLW   GLPIKG FYEE IP+ +E
Sbjct: 196 DLWSFGGLPIKGDFYEERIPSFKE 219

[Close]

BLAST of Sed0020039 vs. ExPASy TrEMBL
Match: A0A5D3BRA8 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00620 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 1.6e-57
Identity = 111/204 (54.41%), Postives = 136/204 (66.67%), Query Frame = 0


Query: 1   MVHFAERVTSGLKYLVILKDKEQLIKDGLSLLAEEPLASTLSPTWQHL-NVKFLSELSRE 60
           MV+F ER  SG+++LVIL D+ QL +DGLSL+ E+P A   +  W  L N   L  L  E
Sbjct: 16  MVYFTERFLSGVRHLVILSDRNQLREDGLSLIVEKPWAGAFADHWSRLDNNSVLPRLFVE 75

Query: 61  LPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHWNTIMKIHGDWSFIDFYWEWL 120
           +P      AWVL+SS+H    N    LTLG+RLIEG+T W T++K+ G++ F D YWEWL
Sbjct: 76  VPLSEEKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVIKVPGEFCFTDCYWEWL 135

Query: 121 EFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLW 180
           E VVG+N ++     L   V ASLYTYD   DVVRAFCE WCP TNTL T  GE+SISLW
Sbjct: 136 ELVVGQNSRLLYSTHLYGTVTASLYTYDRNGDVVRAFCEAWCPSTNTLHTMAGELSISLW 195

Query: 181 DLWDICGLPIKGRFYEEVIPTLQE 204
           DLW   GLPIKG FYEE IP+ +E
Sbjct: 196 DLWSFGGLPIKGDFYEERIPSFKE 219

[Close]

BLAST of Sed0020039 vs. ExPASy TrEMBL
Match: A0A5A7TFC8 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold93G00910 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 2.1e-57
Identity = 112/204 (54.90%), Postives = 138/204 (67.65%), Query Frame = 0


Query: 1   MVHFAERVTSGLKYLVILKDKEQLIKDGLSLLAEEPLASTLSPTWQHL-NVKFLSELSRE 60
           MV+F ER  SG+++LVIL D+ Q  +DGLSL+ E+  A   +  W  L N   L  LS E
Sbjct: 17  MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKLWAGAFADHWPRLDNNSVLPRLSVE 76

Query: 61  LPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHWNTIMKIHGDWSFIDFYWEWL 120
           +P      AWVL+SS+H    N    LTLG+RLIEG+T W T+ K+ G++ F D YWEWL
Sbjct: 77  VPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFTDCYWEWL 136

Query: 121 EFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLW 180
           E VVGRN ++     L +VV ASLYTYD  +DVVRAFCE WCP TNTL T  GE+SISLW
Sbjct: 137 ELVVGRNTRLLYSTHLYSVVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSISLW 196

Query: 181 DLWDICGLPIKGRFYEEVIPTLQE 204
           DLW   GLPIKG FYEE+IP+ +E
Sbjct: 197 DLWSFRGLPIKGDFYEEMIPSFKE 220

[Close]

BLAST of Sed0020039 vs. ExPASy TrEMBL
Match: A0A5D3D7V4 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00260 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 2.1e-57
Identity = 112/204 (54.90%), Postives = 138/204 (67.65%), Query Frame = 0


Query: 1   MVHFAERVTSGLKYLVILKDKEQLIKDGLSLLAEEPLASTLSPTWQHL-NVKFLSELSRE 60
           MV+F ER  SG+++LVIL D+ Q  +DGLSL+ E+  A   +  W  L N   L  LS E
Sbjct: 1   MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKLWAGAFADHWPRLDNNSVLPRLSVE 60

Query: 61  LPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHWNTIMKIHGDWSFIDFYWEWL 120
           +P      AWVL+SS+H    N    LTLG+RLIEG+T W T+ K+ G++ F D YWEWL
Sbjct: 61  VPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFTDCYWEWL 120

Query: 121 EFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLW 180
           E VVGRN ++     L +VV ASLYTYD  +DVVRAFCE WCP TNTL T  GE+SISLW
Sbjct: 121 ELVVGRNTRLLYSTHLYSVVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSISLW 180

Query: 181 DLWDICGLPIKGRFYEEVIPTLQE 204
           DLW   GLPIKG FYEE+IP+ +E
Sbjct: 181 DLWSFRGLPIKGDFYEEMIPSFKE 204

[Close]

BLAST of Sed0020039 vs. TAIR 10
Match: AT1G50790.1 (Plant mobile domain protein family )

HSP 1 Score: 48.9 bits (115), Expect = 6.2e-06
Identity = 25/87 (28.74%), Postives = 40/87 (45.98%), Query Frame = 0


Query: 118 WLEFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSIS 177
           W   +   +E ++ +  +   ++AS Y      D+V    E WCP TNT   + GE +I+
Sbjct: 67  WARKMSALHEPIWRKAGIFEAILASTYKIFKNTDLVMGIAEKWCPDTNTFVFSWGEATIT 126

Query: 178 LWDLWDICGLPIKGRFYEEVIPTLQES 205
           L D+  + G  + G     V  TL  S
Sbjct: 127 LEDVMVLLGFSVLG---SPVFATLDSS 150

[Close]

BLAST of Sed0020039 vs. TAIR 10
Match: AT1G51538.1 (Aminotransferase-like, plant mobile domain family protein )

HSP 1 Score: 47.4 bits (111), Expect = 1.8e-05
Identity = 21/89 (23.60%), Postives = 42/89 (47.19%), Query Frame = 0


Query: 103 MKIHGDWSFIDFYWEWLEFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCP 162
           +  +G WS    +  W + +   +E ++ +  +   + AS+Y       ++ A  E WCP
Sbjct: 49  ISFNGFWSAQPNFKSWAKKMEALHEPIWRKAGIFEAIKASMYKIRKNQSLLLALVEKWCP 108

Query: 163 RTNTLFTAMGEVSISLWDLWDICGLPIKG 192
            T +     GE +I+L D+  + G  ++G
Sbjct: 109 ETKSFLFPWGEATITLEDVLVLLGFSVQG 137

[Close]

BLAST of Sed0020039 vs. TAIR 10
Match: AT1G50820.1 (Aminotransferase-like, plant mobile domain family protein )

HSP 1 Score: 46.6 bits (109), Expect = 3.1e-05
Identity = 26/93 (27.96%), Postives = 43/93 (46.24%), Query Frame = 0


Query: 100 NTIMKIHGDWSFID-FYWEWLEFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCE 159
           +T +K  G W F +  +  W   +   +E ++ +  +   V+AS Y      D+V    E
Sbjct: 45  STSIKFWG-WRFPNKKFKSWARKMASLHEPIWRKAGIFEAVIASTYKIPKDTDLVLGLAE 104

Query: 160 GWCPRTNTLFTAMGEVSISLWDLWDICGLPIKG 192
            WCP T T     GE +I+L D+  + G  + G
Sbjct: 105 KWCPDTKTFIFPWGEATITLEDVMVLLGFSVLG 136

[Close]

BLAST of Sed0020039 vs. TAIR 10
Match: AT4G16050.1 (Aminotransferase-like, plant mobile domain family protein )

HSP 1 Score: 46.2 bits (108), Expect = 4.0e-05
Identity = 23/87 (26.44%), Postives = 42/87 (48.28%), Query Frame = 0


Query: 118 WLEFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSIS 177
           W++ +V  ++  + ++ +   + AS Y       ++ +  + WCP TNT     GE +I+
Sbjct: 81  WVKKMVALHKPTWLKSGIFEAIKASTYRIHKNPSLILSLAQNWCPETNTFVFPWGEATIT 140

Query: 178 LWDLWDICGLPIKGRFYEEVIPTLQES 205
           L D+  + G  I G     V  +LQ S
Sbjct: 141 LEDVNVLLGFSISG---SSVFASLQSS 164

[Close]

BLAST of Sed0020039 vs. TAIR 10
Match: AT1G50770.1 (Aminotransferase-like, plant mobile domain family protein )

HSP 1 Score: 44.3 bits (103), Expect = 1.5e-04
Identity = 25/90 (27.78%), Postives = 39/90 (43.33%), Query Frame = 0


Query: 118 WLEFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSIS 177
           W   +   +E ++ +  +   V AS Y  +   ++V    E WCP T T     GE +I+
Sbjct: 66  WARKMAALHEPIWRKAGIFEAVTASTYKINPNTELVLGIAEKWCPDTKTFVFPWGETTIT 125

Query: 178 LWDLWDICGLPIKGRFYEEVIPTLQESMNI 208
           L D+  + G  + G     V  TL  S  I
Sbjct: 126 LEDVMLLLGFSVLG---SPVFVTLDSSGEI 152

The following BLAST results are available for this feature:

BLAST of Sed0020039 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0047478.1	8.6e-58	55.39	hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]	[more]
TYK02261.1	3.3e-57	54.41	hypothetical protein E5676_scaffold18G00620 [Cucumis melo var. makuwa]	[more]
KAA0060611.1	3.3e-57	54.41	hypothetical protein E6C27_scaffold22G004890 [Cucumis melo var. makuwa]	[more]
TYK19639.1	4.3e-57	54.90	hypothetical protein E5676_scaffold242G00260 [Cucumis melo var. makuwa]	[more]
KAA0041618.1	4.3e-57	54.90	hypothetical protein E6C27_scaffold93G00910 [Cucumis melo var. makuwa]	[more]

BLAST of Sed0020039 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0020039 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TX42	4.2e-58	55.39	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7V4F4	1.6e-57	54.41	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A5D3BRA8	1.6e-57	54.41	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A5A7TFC8	2.1e-57	54.90	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A5D3D7V4	2.1e-57	54.90	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]

BLAST of Sed0020039 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G50790.1	6.2e-06	28.74	Plant mobile domain protein family	[more]
AT1G51538.1	1.8e-05	23.60	Aminotransferase-like, plant mobile domain family protein	[more]
AT1G50820.1	3.1e-05	27.96	Aminotransferase-like, plant mobile domain family protein	[more]
AT4G16050.1	4.0e-05	26.44	Aminotransferase-like, plant mobile domain family protein	[more]
AT1G50770.1	1.5e-04	27.78	Aminotransferase-like, plant mobile domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36607	1,2-DIHYDROXY-3-KETO-5-METHYLTHIOPENTENE DIOXYGENASE 4	coord: 67..200
None	No IPR available	PANTHER	PTHR36607:SF20	1,2-DIHYDROXY-3-KETO-5-METHYLTHIOPENTENE DIOXYGENASE 4	coord: 67..200

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0020039.1	Sed0020039.1	mRNA