Sed0020036 (gene) Chayote v1

Overview
NameSed0020036
Typegene
OrganismSechium edule (Chayote v1)
DescriptionRING-H2 finger protein ATL29
LocationLG01: 70043374 .. 70044270 (-)
RNA-Seq ExpressionSed0020036
SyntenySed0020036
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCAACGAATTCCCCCGCCCTCCGTTCGACAGTCACGATCACCCGACTCCTCCTCTCACTATCGTCCTATCTCTCATTTTCATCACATTCCTCTTTGTCGGTTTATTCTCCATCTACTTCTGTCGCTGTGTTGTCGAATCCTTCCTCCATTCCCGCGACCTCCGTTCCTCCCCCTCCGACCTCCACCCTTACTCCGATTCCCCCACCGCCCCTCCTGGTCTCGACCCTCTCCTCATCAACACCTTCCCCACCTTCCCATACTCCGGAATCAAGGAGTTTCGCAGCGAAAAATTTGGATTAGAATGCGCCATCTGCCTCGTCGAGTTCGATGACGACAGCTTTCTCCGCCTCCTAACTGTTTGTTGCCATGTCTTTCACCAAGAGTGCATTGATCTCTGGCTTGAATCCCACAAGACCTGCCCAGTTTGCCGCAGAGATCTCAACTCCAATTCACCCAATAAAGCCCCCGATGCACAACAAATTTCCCATCAAGAGTCGATCGAAGATGCTATCAGTATCGAGATTGGCGACATCGATGATGTCGATGCAGACGCTGATGACGACGATGAAGCACCTGGTGAAAACAGGGGAAAACAGAGGAGTGAAACAGAGTCGGCCGCAGCAGCGTCAGAGGAAGAGAGTAGGAAGAAATTCTCGAGATCGCATTCGACAGGACATTCGATCGTGAAGGCGGGAAGAGAAGGGGAAGATCAAGATCAAGATAGGTATAAGTTGAGATTGCCTGAACATGTAAAAATCAAGCTAGTTAGAGGGCATAATTGGACAAGAAGTTGTATAACATTTGAAGAGTTCTTGAGAAATCCTGGCAATGGAGTTGGGATTTCAAATCTCTCTGAAACTGCTCATCAGAATAACTTACACAAGCCCCCATGA

mRNA sequence

ATGTCCAACGAATTCCCCCGCCCTCCGTTCGACAGTCACGATCACCCGACTCCTCCTCTCACTATCGTCCTATCTCTCATTTTCATCACATTCCTCTTTGTCGGTTTATTCTCCATCTACTTCTGTCGCTGTGTTGTCGAATCCTTCCTCCATTCCCGCGACCTCCGTTCCTCCCCCTCCGACCTCCACCCTTACTCCGATTCCCCCACCGCCCCTCCTGGTCTCGACCCTCTCCTCATCAACACCTTCCCCACCTTCCCATACTCCGGAATCAAGGAGTTTCGCAGCGAAAAATTTGGATTAGAATGCGCCATCTGCCTCGTCGAGTTCGATGACGACAGCTTTCTCCGCCTCCTAACTGTTTGTTGCCATGTCTTTCACCAAGAGTGCATTGATCTCTGGCTTGAATCCCACAAGACCTGCCCAGTTTGCCGCAGAGATCTCAACTCCAATTCACCCAATAAAGCCCCCGATGCACAACAAATTTCCCATCAAGAGTCGATCGAAGATGCTATCAGTATCGAGATTGGCGACATCGATGATGTCGATGCAGACGCTGATGACGACGATGAAGCACCTGGTGAAAACAGGGGAAAACAGAGGAGTGAAACAGAGTCGGCCGCAGCAGCGTCAGAGGAAGAGAGTAGGAAGAAATTCTCGAGATCGCATTCGACAGGACATTCGATCGTGAAGGCGGGAAGAGAAGGGGAAGATCAAGATCAAGATAGGTATAAGTTGAGATTGCCTGAACATGTAAAAATCAAGCTAGTTAGAGGGCATAATTGGACAAGAAGTTGTATAACATTTGAAGAGTTCTTGAGAAATCCTGGCAATGGAGTTGGGATTTCAAATCTCTCTGAAACTGCTCATCAGAATAACTTACACAAGCCCCCATGA

Coding sequence (CDS)

ATGTCCAACGAATTCCCCCGCCCTCCGTTCGACAGTCACGATCACCCGACTCCTCCTCTCACTATCGTCCTATCTCTCATTTTCATCACATTCCTCTTTGTCGGTTTATTCTCCATCTACTTCTGTCGCTGTGTTGTCGAATCCTTCCTCCATTCCCGCGACCTCCGTTCCTCCCCCTCCGACCTCCACCCTTACTCCGATTCCCCCACCGCCCCTCCTGGTCTCGACCCTCTCCTCATCAACACCTTCCCCACCTTCCCATACTCCGGAATCAAGGAGTTTCGCAGCGAAAAATTTGGATTAGAATGCGCCATCTGCCTCGTCGAGTTCGATGACGACAGCTTTCTCCGCCTCCTAACTGTTTGTTGCCATGTCTTTCACCAAGAGTGCATTGATCTCTGGCTTGAATCCCACAAGACCTGCCCAGTTTGCCGCAGAGATCTCAACTCCAATTCACCCAATAAAGCCCCCGATGCACAACAAATTTCCCATCAAGAGTCGATCGAAGATGCTATCAGTATCGAGATTGGCGACATCGATGATGTCGATGCAGACGCTGATGACGACGATGAAGCACCTGGTGAAAACAGGGGAAAACAGAGGAGTGAAACAGAGTCGGCCGCAGCAGCGTCAGAGGAAGAGAGTAGGAAGAAATTCTCGAGATCGCATTCGACAGGACATTCGATCGTGAAGGCGGGAAGAGAAGGGGAAGATCAAGATCAAGATAGGTATAAGTTGAGATTGCCTGAACATGTAAAAATCAAGCTAGTTAGAGGGCATAATTGGACAAGAAGTTGTATAACATTTGAAGAGTTCTTGAGAAATCCTGGCAATGGAGTTGGGATTTCAAATCTCTCTGAAACTGCTCATCAGAATAACTTACACAAGCCCCCATGA

Protein sequence

MSNEFPRPPFDSHDHPTPPLTIVLSLIFITFLFVGLFSIYFCRCVVESFLHSRDLRSSPSDLHPYSDSPTAPPGLDPLLINTFPTFPYSGIKEFRSEKFGLECAICLVEFDDDSFLRLLTVCCHVFHQECIDLWLESHKTCPVCRRDLNSNSPNKAPDAQQISHQESIEDAISIEIGDIDDVDADADDDDEAPGENRGKQRSETESAAAASEEESRKKFSRSHSTGHSIVKAGREGEDQDQDRYKLRLPEHVKIKLVRGHNWTRSCITFEEFLRNPGNGVGISNLSETAHQNNLHKPP
Homology
BLAST of Sed0020036 vs. NCBI nr
Match: XP_022963762.1 (RING-H2 finger protein ATL29 [Cucurbita moschata])

HSP 1 Score: 402.9 bits (1034), Expect = 2.4e-108
Identity = 211/313 (67.41%), Postives = 243/313 (77.64%), Query Frame = 0

Query: 1   MSNEFPRPPFDSHDHPTPPLTIVLSLIFITFLFVGLFSIYFCRCVVESFLHSRDLRSSPS 60
           MS +F    F   +H TPPLTI+L+LI + FL VG FSIYFCRC+++S LHSR+LR SPS
Sbjct: 41  MSTDFSHSSFSPEEHSTPPLTIILTLILLAFLLVGFFSIYFCRCIMDSLLHSRNLRRSPS 100

Query: 61  D--LHPYSDSPTAPPGLDPLLINTFPTFPYSGIKEFRSEKFGLECAICLVEFDDDSFLRL 120
              LHP +DSPT PPGLDPLLINTFPTFPYSGIKEFRS+KFGLECAICL+EFDDDSFLRL
Sbjct: 101 GNILHPSADSPTVPPGLDPLLINTFPTFPYSGIKEFRSDKFGLECAICLLEFDDDSFLRL 160

Query: 121 LTVCCHVFHQECIDLWLESHKTCPVCRRDLNS----NSPNKAPDAQ-----QISHQESIE 180
           LTVCCHVFHQECIDLWLESHKTCPVCRR+L+S    NS +K PD+      + +H ESIE
Sbjct: 161 LTVCCHVFHQECIDLWLESHKTCPVCRRNLDSDSARNSADKPPDSDHDNPPRSTHHESIE 220

Query: 181 DAISIEI----GDIDDVDADADDDDEAPGENRGKQRSETESAAAASEEESRKKFSRSHST 240
           DAISI+I     D D+ DAD D+DD   G NRGKQ  +TE A    E++  KKFSR HST
Sbjct: 221 DAISIDIDDDVDDDDNADADDDNDDRRSGSNRGKQSIKTEEA----EDDGAKKFSRCHST 280

Query: 241 GHSIVKAGREGEDQDQDRYKLRLPEHVKIKLVRGHNWTRSCITFEEFLRNPGNGVGISNL 299
           GHSI+KA RE    D DRYKLRLPEHVKIK++RGHNWT SC+TF+EFLRNPGNG G S L
Sbjct: 281 GHSILKARRE----DDDRYKLRLPEHVKIKIIRGHNWTGSCVTFDEFLRNPGNGGGFSEL 340

BLAST of Sed0020036 vs. NCBI nr
Match: XP_023554783.1 (RING-H2 finger protein ATL29 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 401.4 bits (1030), Expect = 7.0e-108
Identity = 213/313 (68.05%), Postives = 245/313 (78.27%), Query Frame = 0

Query: 1   MSNEFPRPPFDSHDHPTPPLTIVLSLIFITFLFVGLFSIYFCRCVVESFLHSRDLRSSPS 60
           MS +F    F   +H TPPLTI+L+LI + FL VG FSIYFCRC+++S LHSR+LR SPS
Sbjct: 36  MSTDFSHSSFSPEEHSTPPLTIILTLILLAFLLVGFFSIYFCRCIMDSLLHSRNLRRSPS 95

Query: 61  D--LHPYSDSPTAPPGLDPLLINTFPTFPYSGIKEFRSEKFGLECAICLVEFDDDSFLRL 120
              LHP +DSPT PPGLDPLLINTFPTFPYSGIKEFRS+KFGLECAICL+EFDDDSFLRL
Sbjct: 96  GNILHPSADSPTVPPGLDPLLINTFPTFPYSGIKEFRSDKFGLECAICLLEFDDDSFLRL 155

Query: 121 LTVCCHVFHQECIDLWLESHKTCPVCRRDLNS----NSPNKAPDAQ------QISHQESI 180
           LTVCCHVFHQECIDLWLESHKTCPVCRR+L+S    NS +K PD+       + +H ESI
Sbjct: 156 LTVCCHVFHQECIDLWLESHKTCPVCRRNLDSDSARNSADKPPDSDDHDNPPRSTHHESI 215

Query: 181 EDAISIEIGD--IDDVDADADDDDE-APGENRGKQRSETESAAAASEEESRKKFSRSHST 240
           EDAISI+I D   DD +ADADDDD+   G NRGKQ  +TE A    E++  KKFSR HST
Sbjct: 216 EDAISIDIDDDVDDDDNADADDDDDRRSGSNRGKQSIKTEEA----EDDGIKKFSRCHST 275

Query: 241 GHSIVKAGREGEDQDQDRYKLRLPEHVKIKLVRGHNWTRSCITFEEFLRNPGNGVGISNL 299
           GHSI+KA R    +D DRYKLRLPEHVKIK++RGHNWT SC+TFEEFLRNPGNG G S L
Sbjct: 276 GHSILKARR----KDDDRYKLRLPEHVKIKIIRGHNWTGSCVTFEEFLRNPGNGGGFSEL 335

BLAST of Sed0020036 vs. NCBI nr
Match: XP_022967655.1 (LOW QUALITY PROTEIN: RING-H2 finger protein ATL29-like, partial [Cucurbita maxima])

HSP 1 Score: 400.6 bits (1028), Expect = 1.2e-107
Identity = 212/312 (67.95%), Postives = 244/312 (78.21%), Query Frame = 0

Query: 1   MSNEFPRPPFDSHDHPTPPLTIVLSLIFITFLFVGLFSIYFCRCVVESFLHSRDLRSSPS 60
           MS +FP   F   +H TPPLTI+L+LI + FL VG FSIYFCRC+++S LHSR+LR SPS
Sbjct: 31  MSTDFPHSSFSPEEHSTPPLTIILTLILLAFLLVGFFSIYFCRCIMDSLLHSRNLRRSPS 90

Query: 61  D--LHPYSDSPTAPPGLDPLLINTFPTFPYSGIKEFRSEKFGLECAICLVEFDDDSFLRL 120
              LHP +DSPT PPGLDPLLINTFPTFPYSGIKEFRS+KFGLECAICL+EFDDDSFLRL
Sbjct: 91  GNILHPSADSPTVPPGLDPLLINTFPTFPYSGIKEFRSDKFGLECAICLLEFDDDSFLRL 150

Query: 121 LTVCCHVFHQECIDLWLESHKTCPVCRRDLNS----NSPNKAPDAQ-----QISHQESIE 180
           LTVCCHVFHQECIDLWLESHKTCPVCRR+L+S    NS +K PD+      + +H ESIE
Sbjct: 151 LTVCCHVFHQECIDLWLESHKTCPVCRRNLDSDSTRNSADKPPDSDHDNPPRSTHHESIE 210

Query: 181 DAISIEIGD--IDDVDADADDDDE-APGENRGKQRSETESAAAASEEESRKKFSRSHSTG 240
           DAISI+I D   DD +ADADDDD+   G NRGKQ  + E A    E++  KKFSR HSTG
Sbjct: 211 DAISIDIDDDVDDDDNADADDDDDRRSGSNRGKQSIKIEEA----EDDGIKKFSRCHSTG 270

Query: 241 HSIVKAGREGEDQDQDRYKLRLPEHVKIKLVRGHNWTRSCITFEEFLRNPGNGVGISNLS 299
           HSI+KA RE    D DRYKLRLPEHVKIK++RGHNWT SC+TF+EFLRNPGN  G S LS
Sbjct: 271 HSILKARRE----DDDRYKLRLPEHVKIKMIRGHNWTGSCVTFDEFLRNPGNAGGFSELS 330

BLAST of Sed0020036 vs. NCBI nr
Match: KAG6571655.1 (RING-H2 finger protein ATL29, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011384.1 RING-H2 finger protein ATL29, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 397.9 bits (1021), Expect = 7.7e-107
Identity = 209/313 (66.77%), Postives = 242/313 (77.32%), Query Frame = 0

Query: 1   MSNEFPRPPFDSHDHPTPPLTIVLSLIFITFLFVGLFSIYFCRCVVESFLHSRDLRSSPS 60
           MS +F    F   +H TPPLTI+L+LI + FL VG FSIYFCRC+++S LHSR+LR SPS
Sbjct: 41  MSTDFSHSSFSPEEHSTPPLTIILTLILLAFLLVGFFSIYFCRCIMDSLLHSRNLRRSPS 100

Query: 61  D--LHPYSDSPTAPPGLDPLLINTFPTFPYSGIKEFRSEKFGLECAICLVEFDDDSFLRL 120
              LHP +DSPT PPGLDPLLINTFPTFPYSGIKEFRS+KFGLECAICL+EFDDDSFLRL
Sbjct: 101 GNILHPSADSPTVPPGLDPLLINTFPTFPYSGIKEFRSDKFGLECAICLLEFDDDSFLRL 160

Query: 121 LTVCCHVFHQECIDLWLESHKTCPVCRRDLNS----NSPNKAPDAQ-----QISHQESIE 180
           LTVCCHVFHQECIDLWLESHKTCPVCRR+L+S    NS +K PD+      + +H ESIE
Sbjct: 161 LTVCCHVFHQECIDLWLESHKTCPVCRRNLDSDSARNSADKPPDSDHDNPPRSTHHESIE 220

Query: 181 DAISIEI----GDIDDVDADADDDDEAPGENRGKQRSETESAAAASEEESRKKFSRSHST 240
           DAISI+I     D D+ DAD D+D+   G NRGKQ  +TE A    E++  KKFSR HST
Sbjct: 221 DAISIDIDDDVDDDDNADADDDNDNRRSGSNRGKQSIKTEEA----EDDGVKKFSRCHST 280

Query: 241 GHSIVKAGREGEDQDQDRYKLRLPEHVKIKLVRGHNWTRSCITFEEFLRNPGNGVGISNL 299
           GHSI+KA RE    D DRYKLRLPEHVKIK++RGHNWT SC+TF+E LRNPGNG G S L
Sbjct: 281 GHSILKARRE----DDDRYKLRLPEHVKIKIIRGHNWTGSCVTFDEILRNPGNGGGFSEL 340

BLAST of Sed0020036 vs. NCBI nr
Match: XP_038888539.1 (RING-H2 finger protein ATL29-like [Benincasa hispida])

HSP 1 Score: 396.0 bits (1016), Expect = 2.9e-106
Identity = 212/316 (67.09%), Postives = 244/316 (77.22%), Query Frame = 0

Query: 1   MSNEFPRPPFDSHDHPTPPLTIVLSLIFITFLFVGLFSIYFCRCVVESFLHSRDLRSSPS 60
           MS +F  PPF +HDH TPPLTI+L+LI + FL VG FSIYFCRCV++S LHSR+LR SPS
Sbjct: 33  MSTDFSHPPFSTHDHTTPPLTIILTLILLAFLLVGFFSIYFCRCVMDSLLHSRNLRRSPS 92

Query: 61  D--LHPYSDSPTAPPGLDPLLINTFPTFPYSGIKEFRSEKFGLECAICLVEFDDDSFLRL 120
              LHP SDSP  PPGLDPLLIN+FPTFPYSGIKEFRS+KFGLECAICL+EFDDDSFLRL
Sbjct: 93  GNLLHPSSDSPAPPPGLDPLLINSFPTFPYSGIKEFRSDKFGLECAICLLEFDDDSFLRL 152

Query: 121 LTVCCHVFHQECIDLWLESHKTCPVCRRDLNSNSPNKAPD-----------AQQISHQES 180
           LT C HVFHQECIDLWLESHKTCPVCRR+L+++SP  + D             + +H ES
Sbjct: 153 LTNCYHVFHQECIDLWLESHKTCPVCRRNLDADSPRDSSDKPLDPNSNTDNPPRNAHHES 212

Query: 181 IEDAISIEIG---DIDDVDADADDDDEAPGE-NRGKQR-SETESAAAASEEESRKKFSRS 240
           IEDAISI+I    D DD +ADADDD    G  N+GKQ   +TE      +EES K+FSR 
Sbjct: 213 IEDAISIDIDDDVDDDDDNADADDDHHPSGNLNKGKQSIRKTEE----DQEESIKRFSRC 272

Query: 241 HSTGHSIVKAGREGEDQDQDRYKLRLPEHVKIKLVRGHNWTRSCITFEEFLRNPGNGVGI 299
           HSTGHSIVKA REGE   QD++KLRLPEH+KIK++RGHNWT SC+TFEEFLRNPGNG G 
Sbjct: 273 HSTGHSIVKARREGE---QDKHKLRLPEHIKIKIIRGHNWTGSCVTFEEFLRNPGNGGGF 332

BLAST of Sed0020036 vs. ExPASy Swiss-Prot
Match: O49691 (RING-H2 finger protein ATL29 OS=Arabidopsis thaliana OX=3702 GN=ATL29 PE=3 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 2.8e-59
Identity = 129/278 (46.40%), Postives = 176/278 (63.31%), Query Frame = 0

Query: 6   PRPPFDSHDHPTPPLTIVLSLIFITFLFVGLFSIYFCRCVVESFL------HSRDLRSSP 65
           P+PP     + TPPLT++L++I + F F+G F++YFC+C +++ +      H  D  S  
Sbjct: 11  PQPP--QQHYVTPPLTVILTVILLVFFFIGFFTLYFCKCFLDTMVQAWRLHHGGDTVSDN 70

Query: 66  SDLHPYSDSPTAPPGLDPLLINTFPTFPYSGIKEFRSEKFGLECAICLVEFDDDSFLRLL 125
               P  ++P   PGL+  +IN+FPTFPYS +K+ R EK+GLECAICL+EFD D  LRLL
Sbjct: 71  PLQQP--EAPPVNPGLELRIINSFPTFPYSSVKDLREEKYGLECAICLLEFDGDHVLRLL 130

Query: 126 TVCCHVFHQECIDLWLESHKTCPVCRRDLNSNSPNKAPDAQQISHQESIEDAISIEIGDI 185
           T C HVFHQECIDLW ESH+TCPVCRRDL+   P   P+  + +  E I D I  E  D 
Sbjct: 131 TTCYHVFHQECIDLWFESHRTCPVCRRDLD---PPPPPENTKPTVDEMIIDVIQ-ETSD- 190

Query: 186 DDVDADADDDDEAPGENRGKQRSETESAAAASEEESRKKFSRSHSTGHSIVKAGREGEDQ 245
              D + D   +          S  ++++   E+   +KFSRSHSTGHSIV+     + +
Sbjct: 191 ---DEEDDHHRQQTTTQIDTWPSSGQTSSIKKEQNLPEKFSRSHSTGHSIVR----NKPE 250

Query: 246 DQDRYKLRLPEHVKIKLVRGHNWTRSCITFEEFLRNPG 278
           ++D+Y LRLPEHVKIK+ RGH+ T SC+TF E +RN G
Sbjct: 251 EEDKYTLRLPEHVKIKVTRGHSQTESCVTFAELIRNRG 272

BLAST of Sed0020036 vs. ExPASy Swiss-Prot
Match: Q9FIR0 (RING-H2 finger protein ATL30 OS=Arabidopsis thaliana OX=3702 GN=ATL30 PE=2 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 2.2e-48
Identity = 120/292 (41.10%), Postives = 171/292 (58.56%), Query Frame = 0

Query: 3   NEFPRPPFDSHDHPTPPLTIVLSLIFITFLFVGLFSIYFCRC----VVESFLH--SRDLR 62
           N+    P+    +  PPL I+L++I +   F+G F+IYFC+C    + E++ H     L 
Sbjct: 8   NQNTTVPYPPQHYSKPPLVIILTVILLVVFFIGFFAIYFCKCFYHTLTEAWNHHYHNGLP 67

Query: 63  SSPSDLHPYSDSPTAPPGLDPLLINTFPTFPYSGIKEFRSEKFGLECAICLVEFDDDS-F 122
            +          P   PGL+P +I ++P FP+S +K+ R +K+GLECAICL+EF+++   
Sbjct: 68  ENQIQAQQEPVQPPVNPGLEPHIIQSYPLFPFSSVKDLREDKYGLECAICLLEFEEEHIL 127

Query: 123 LRLLTVCCHVFHQECIDLWLESHKTCPVCRRDLNSNSPNKAPDAQQISHQESIEDAISIE 182
           LRLLT C HVFHQECID WLES+KTCPVCRR+L+ N+P            E+I++ I IE
Sbjct: 128 LRLLTTCYHVFHQECIDQWLESNKTCPVCRRNLDPNAP------------ENIKELI-IE 187

Query: 183 IGDIDDVDADADDDDEAPGENRGKQRSETESAAAASEEES----RK------KFSRSHST 242
           +              E   ENR ++++ T +    S + S    RK      KFSRS +T
Sbjct: 188 V------------IQENAHENRDQEQTSTSNEVMLSRQSSGNNERKIETLPDKFSRSKTT 247

Query: 243 GHSIVKAGREGEDQDQDRYKLRLPEHVKIKLVRGH--NWTRSCITFEEFLRN 276
           GHSIV+     + +++DRY LRLP+HVKIK+ R H  N T SCI+F E +RN
Sbjct: 248 GHSIVR----NKPEEEDRYTLRLPDHVKIKVTRRHNNNQTESCISFGELVRN 270

BLAST of Sed0020036 vs. ExPASy Swiss-Prot
Match: Q6NKR1 (RING-H2 finger protein ATL28 OS=Arabidopsis thaliana OX=3702 GN=ATL28 PE=2 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.3e-29
Identity = 87/261 (33.33%), Postives = 126/261 (48.28%), Query Frame = 0

Query: 19  PLTIVLSLIFITFLFVGLFSIYFCRCVVESFLHSRDLRSSPSDLHPYSDSPTAPPGLDPL 78
           P+T+VL+ + +  +F G FS++  + ++     + +L+ +P     +  +P    GLDP 
Sbjct: 22  PVTVVLTGVLLFVIFAGFFSLFLWQFLLNRLFTTWNLQRTPYGDLIHVATPPENTGLDPF 81

Query: 79  LINTFPTFPYSGIKEFRSEKFGLECAICLVEFDDDSFLRLLTVCCHVFHQECIDLWLESH 138
           +I +FP F YS   +   +  G ECAICL EF D+  +RL+TVC H FH  CIDLW E H
Sbjct: 82  IIRSFPVFHYSSATK---KNHGTECAICLSEFSDEDTVRLITVCRHPFHSNCIDLWFELH 141

Query: 139 KTCPVCRRDLNSNSPNKAPDAQQISHQESIEDAISIEIGDIDDVDADADDDDEAPGENRG 198
           KTCPVCR +L+       P        ES  + ++I I DI                N  
Sbjct: 142 KTCPVCRCELD-------PGMIGSGRLESFHNTVTITIQDI----------------NHD 201

Query: 199 KQRSETESAAAASEEESRKKFSRSHSTGHSIVKAGREGEDQDQDRYKLRLPEHVKIKLVR 258
           ++   T  ++    E S  +FSRSHSTGH +VK                      +K  R
Sbjct: 202 EENPPTAGSSKRLIEASAWRFSRSHSTGHFMVKT-----------------TDANVKSKR 239

Query: 259 GHNWTRSCITFEEFLRNPGNG 280
            H  T SC++F+E  R  G G
Sbjct: 262 RHYQTGSCVSFDELTRYEGAG 239

BLAST of Sed0020036 vs. ExPASy Swiss-Prot
Match: O64763 (E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana OX=3702 GN=ATL9 PE=1 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.0e-28
Identity = 89/262 (33.97%), Postives = 131/262 (50.00%), Query Frame = 0

Query: 8   PPFDSHDHPTPPLTIVLSLIFITFLFVGLFSIYFCRCVVESFLHSRDLRSSPSDLHP--Y 67
           PP  +   P  P+ +V++++F+   F+ +F   FCR     F  S   RS+ +D      
Sbjct: 39  PPGTTKTKPNDPVVVVITVLFLVIFFM-VFGSIFCRRSNAQFSRSSIFRSTDADAESQVV 98

Query: 68  SDSPTAPPGLDPLLINTFPTFPYSGIKEFRSEKFGLECAICLVEFDDDSFLRLLTVCCHV 127
                   GLD   I TFPTF YS +K  R  K G+ECA+CL EF+DD  LRL+  CCHV
Sbjct: 99  RIRRLTARGLDAEAIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHV 158

Query: 128 FHQECIDLWLESHKTCPVCRRDLNSNSPNKAPDAQQ---------ISHQESIEDAISIEI 187
           FH +C+D+WL  H TCP+CR DL  N      D+ +         IS     E  + +E 
Sbjct: 159 FHADCVDVWLSEHSTCPLCRADLVLNQQGDDDDSTESYSGTDPGTISSSTDPERGMVLES 218

Query: 188 GDIDDVDADADDDDEAPGENRGKQRSETESAAAASEEESRKKFSRSHSTGHSIVKAGREG 247
            D   +DA    +              ++S   +S + +   F RSHSTGHS+++     
Sbjct: 219 SDAHLLDAVTWSNSNI--------TPRSKSTGLSSWQITGILFPRSHSTGHSLIQPA--- 278

Query: 248 EDQDQDRYKLRLPEHVKIKLVR 259
              + DR+ LRLP+ V+ +L++
Sbjct: 279 --GNLDRFTLRLPDDVRRQLMK 286

BLAST of Sed0020036 vs. ExPASy Swiss-Prot
Match: Q8RXX9 (E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV=2)

HSP 1 Score: 124.4 bits (311), Expect = 2.2e-27
Identity = 89/251 (35.46%), Postives = 130/251 (51.79%), Query Frame = 0

Query: 17  TPPLTIVLSLIFITFLFVGLFSIYFCRCVVESFLHSRDLRSSPS-DLHPYSDSPTAPPGL 76
           +P + +++ ++     F+G FSIYF  C         D   SP+      +    A  GL
Sbjct: 46  SPAMAVIVVILIAALFFMGFFSIYFRHC-----SGVPDAGVSPAGGARSRATVNAAARGL 105

Query: 77  DPLLINTFPTFPYSGIKEFRSEKFGLECAICLVEFDDDSFLRLLTVCCHVFHQECIDLWL 136
           D  ++ TFPTF YS +K  +  K  LECAICL EF+DD  LRLL  C HVFH  CID WL
Sbjct: 106 DVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWL 165

Query: 137 ESHKTCPVCRRDLNSNSPNKAPDAQQISHQESIEDAISIEIGDIDDVDADADDDDEAP-G 196
           E+H TCPVCR +L          A+Q++  ES+E   +    ++  V  + +    AP  
Sbjct: 166 EAHVTCPVCRANL----------AEQVAEGESVEPGGTEPDLELQQVVVNPEPVVTAPVP 225

Query: 197 ENRGKQRSETESAAAASEEESRKKFSRSHSTGHSIVKAGREGEDQDQDRYKLRLPEHVKI 256
           E       ++        +  R KFSRSH+TGHS+V+ G     +  +R+ LRLPE V+ 
Sbjct: 226 EQLVTSEVDSRRLPGVPVDLKRVKFSRSHTTGHSVVQPG-----ECTERFTLRLPEDVRK 276

Query: 257 KLVRGHNWTRS 266
           ++++     R+
Sbjct: 286 RIMKDWKLNRT 276

BLAST of Sed0020036 vs. ExPASy TrEMBL
Match: A0A6J1HG37 (RING-H2 finger protein ATL29 OS=Cucurbita moschata OX=3662 GN=LOC111463956 PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 1.2e-108
Identity = 211/313 (67.41%), Postives = 243/313 (77.64%), Query Frame = 0

Query: 1   MSNEFPRPPFDSHDHPTPPLTIVLSLIFITFLFVGLFSIYFCRCVVESFLHSRDLRSSPS 60
           MS +F    F   +H TPPLTI+L+LI + FL VG FSIYFCRC+++S LHSR+LR SPS
Sbjct: 41  MSTDFSHSSFSPEEHSTPPLTIILTLILLAFLLVGFFSIYFCRCIMDSLLHSRNLRRSPS 100

Query: 61  D--LHPYSDSPTAPPGLDPLLINTFPTFPYSGIKEFRSEKFGLECAICLVEFDDDSFLRL 120
              LHP +DSPT PPGLDPLLINTFPTFPYSGIKEFRS+KFGLECAICL+EFDDDSFLRL
Sbjct: 101 GNILHPSADSPTVPPGLDPLLINTFPTFPYSGIKEFRSDKFGLECAICLLEFDDDSFLRL 160

Query: 121 LTVCCHVFHQECIDLWLESHKTCPVCRRDLNS----NSPNKAPDAQ-----QISHQESIE 180
           LTVCCHVFHQECIDLWLESHKTCPVCRR+L+S    NS +K PD+      + +H ESIE
Sbjct: 161 LTVCCHVFHQECIDLWLESHKTCPVCRRNLDSDSARNSADKPPDSDHDNPPRSTHHESIE 220

Query: 181 DAISIEI----GDIDDVDADADDDDEAPGENRGKQRSETESAAAASEEESRKKFSRSHST 240
           DAISI+I     D D+ DAD D+DD   G NRGKQ  +TE A    E++  KKFSR HST
Sbjct: 221 DAISIDIDDDVDDDDNADADDDNDDRRSGSNRGKQSIKTEEA----EDDGAKKFSRCHST 280

Query: 241 GHSIVKAGREGEDQDQDRYKLRLPEHVKIKLVRGHNWTRSCITFEEFLRNPGNGVGISNL 299
           GHSI+KA RE    D DRYKLRLPEHVKIK++RGHNWT SC+TF+EFLRNPGNG G S L
Sbjct: 281 GHSILKARRE----DDDRYKLRLPEHVKIKIIRGHNWTGSCVTFDEFLRNPGNGGGFSEL 340

BLAST of Sed0020036 vs. ExPASy TrEMBL
Match: A0A6J1HV34 (LOW QUALITY PROTEIN: RING-H2 finger protein ATL29-like OS=Cucurbita maxima OX=3661 GN=LOC111467100 PE=4 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 5.8e-108
Identity = 212/312 (67.95%), Postives = 244/312 (78.21%), Query Frame = 0

Query: 1   MSNEFPRPPFDSHDHPTPPLTIVLSLIFITFLFVGLFSIYFCRCVVESFLHSRDLRSSPS 60
           MS +FP   F   +H TPPLTI+L+LI + FL VG FSIYFCRC+++S LHSR+LR SPS
Sbjct: 31  MSTDFPHSSFSPEEHSTPPLTIILTLILLAFLLVGFFSIYFCRCIMDSLLHSRNLRRSPS 90

Query: 61  D--LHPYSDSPTAPPGLDPLLINTFPTFPYSGIKEFRSEKFGLECAICLVEFDDDSFLRL 120
              LHP +DSPT PPGLDPLLINTFPTFPYSGIKEFRS+KFGLECAICL+EFDDDSFLRL
Sbjct: 91  GNILHPSADSPTVPPGLDPLLINTFPTFPYSGIKEFRSDKFGLECAICLLEFDDDSFLRL 150

Query: 121 LTVCCHVFHQECIDLWLESHKTCPVCRRDLNS----NSPNKAPDAQ-----QISHQESIE 180
           LTVCCHVFHQECIDLWLESHKTCPVCRR+L+S    NS +K PD+      + +H ESIE
Sbjct: 151 LTVCCHVFHQECIDLWLESHKTCPVCRRNLDSDSTRNSADKPPDSDHDNPPRSTHHESIE 210

Query: 181 DAISIEIGD--IDDVDADADDDDE-APGENRGKQRSETESAAAASEEESRKKFSRSHSTG 240
           DAISI+I D   DD +ADADDDD+   G NRGKQ  + E A    E++  KKFSR HSTG
Sbjct: 211 DAISIDIDDDVDDDDNADADDDDDRRSGSNRGKQSIKIEEA----EDDGIKKFSRCHSTG 270

Query: 241 HSIVKAGREGEDQDQDRYKLRLPEHVKIKLVRGHNWTRSCITFEEFLRNPGNGVGISNLS 299
           HSI+KA RE    D DRYKLRLPEHVKIK++RGHNWT SC+TF+EFLRNPGN  G S LS
Sbjct: 271 HSILKARRE----DDDRYKLRLPEHVKIKMIRGHNWTGSCVTFDEFLRNPGNAGGFSELS 330

BLAST of Sed0020036 vs. ExPASy TrEMBL
Match: A0A1S3CQ65 (RING-H2 finger protein ATL29-like OS=Cucumis melo OX=3656 GN=LOC103503555 PE=4 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 4.6e-105
Identity = 206/319 (64.58%), Postives = 236/319 (73.98%), Query Frame = 0

Query: 1   MSNEFPRPPFDSHDHPTPPLTIVLSLIFITFLFVGLFSIYFCRCVVESFLHSRDLRSSPS 60
           MS +F RPPF +HDH TPPLTI+L+LI + FL +G FSIYFCRC+++S LHSR+LR SPS
Sbjct: 86  MSTDFSRPPFATHDHSTPPLTIILTLILLAFLLIGFFSIYFCRCIMDSLLHSRNLRRSPS 145

Query: 61  D--LHPYSDSPTAPPGLDPLLINTFPTFPYSGIKEFRSEKFGLECAICLVEFDDDSFLRL 120
              LHP SD+P  PPGLDPLLIN+FPTFPYSGIKEFRS+KFGLECAICL+EFDDDSFLRL
Sbjct: 146 GNLLHPSSDAPAPPPGLDPLLINSFPTFPYSGIKEFRSDKFGLECAICLLEFDDDSFLRL 205

Query: 121 LTVCCHVFHQECIDLWLESHKTCPVCRRDLNSNSPNKAPD-----------AQQISHQES 180
           LT CCHVFHQECIDLWL+SHKTCPVCRRDL+S SP  + D             +ISH ES
Sbjct: 206 LTNCCHVFHQECIDLWLDSHKTCPVCRRDLDSESPRDSTDKPLDPDSNTDNPPRISHHES 265

Query: 181 IEDAISIEI-GDIDDVDADADDDDEAPGE--NRGKQ-----RSETESAAAASEEESRKKF 240
           IEDAISIEI  D+DD D    D+D  P     RGKQ       E E      E  S K+F
Sbjct: 266 IEDAISIEIDDDVDDEDNGDADEDHRPSVCWERGKQTITKTEEEKEKEKEKKESGSFKRF 325

Query: 241 SRSHSTGHSIVKAGREGEDQDQDRYKLRLPEHVKIKLVRGHNWTRSCITFEEFLRNPGNG 299
           SR HSTGHSIVK  REGE    D++KLRLPEH+KIK++RGHNWT SC+TF+EFLRNPGN 
Sbjct: 326 SRCHSTGHSIVKGRREGE----DKHKLRLPEHIKIKIIRGHNWTGSCVTFDEFLRNPGNS 385

BLAST of Sed0020036 vs. ExPASy TrEMBL
Match: A0A6J1ESF8 (RING-H2 finger protein ATL29-like OS=Cucurbita moschata OX=3662 GN=LOC111437314 PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 2.5e-103
Identity = 206/304 (67.76%), Postives = 236/304 (77.63%), Query Frame = 0

Query: 1   MSNEFPRPPFDSHDHPTPPLTIVLSLIFITFLFVGLFSIYFCRCVVESFLHSRDLRSSPS 60
           MS +  R PF S DH +PP+TIVL+LI + FLFVG FSIY CRCVV+SFLHSR++R S S
Sbjct: 1   MSTDLTRIPFPSQDHASPPVTIVLTLILVAFLFVGFFSIYCCRCVVDSFLHSRNVRRSTS 60

Query: 61  D--LHPYSDSPTAPPGLDPLLINTFPTFPYSGIKEFRSEKFGLECAICLVEFDDDSFLRL 120
              LHP +DSP AP GLDPLLIN+FPTFPYS IKEFRS+  GLECAICL+EF+D+SFLRL
Sbjct: 61  GNLLHPSNDSPAAPTGLDPLLINSFPTFPYSKIKEFRSDNVGLECAICLLEFNDESFLRL 120

Query: 121 LTVCCHVFHQECIDLWLESHKTCPVCRRDLNS----NSPNKAPDAQQISHQESIEDAISI 180
           LTVC HVFHQECIDLWLESHKTCPVCRR+L+S    NS +K  D  + SH+ESIEDAISI
Sbjct: 121 LTVCYHVFHQECIDLWLESHKTCPVCRRNLDSDLRRNSADKTSDPPRTSHRESIEDAISI 180

Query: 181 EIGDIDDVDADAD-DDDEAPGENRGKQRSETESAAAASEEESRKKFSRSHSTGHSIVKAG 240
           +I +  D DAD+D DD+E    N+GKQR ETE      +EESRKKFSRSHSTGHSIVKA 
Sbjct: 181 DIDEDADADADSDADDNEGSCSNKGKQRIETEE---VEKEESRKKFSRSHSTGHSIVKAK 240

Query: 241 REGEDQDQDRYKLRLPEHVKIKLVRGHNWTRSCITFEEFLRNPGNGVGISNLSETAHQNN 298
           REGE     R+KL LPEHVKIK++RGHNWT SC+TFEE  RNP NG G S L E   +NN
Sbjct: 241 REGE----SRHKLILPEHVKIKILRGHNWTGSCVTFEELARNPSNGGGFSKLCERGDRNN 297

BLAST of Sed0020036 vs. ExPASy TrEMBL
Match: A0A6J1K7T3 (RING-H2 finger protein ATL29-like OS=Cucurbita maxima OX=3661 GN=LOC111491422 PE=4 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 1.2e-102
Identity = 204/304 (67.11%), Postives = 238/304 (78.29%), Query Frame = 0

Query: 1   MSNEFPRPPFDSHDHPTPPLTIVLSLIFITFLFVGLFSIYFCRCVVESFLHSRDLRSSPS 60
           MS +  R PF + DH +PP+TIVL+LI + FLFVG FSIY CRCVV+SFLHSR+LR S S
Sbjct: 22  MSTDLTRIPFPAQDHGSPPVTIVLTLILVAFLFVGFFSIYCCRCVVDSFLHSRNLRRSTS 81

Query: 61  D--LHPYSDSPTAPPGLDPLLINTFPTFPYSGIKEFRSEKFGLECAICLVEFDDDSFLRL 120
              LHP +DSP AP GLDPLLIN+FPTFPYS IKEFRS+  GLECAICL+EF+D+SFLRL
Sbjct: 82  GNLLHPSTDSPAAPTGLDPLLINSFPTFPYSKIKEFRSDNLGLECAICLIEFNDESFLRL 141

Query: 121 LTVCCHVFHQECIDLWLESHKTCPVCRRDLNS----NSPNKAPDAQQISHQESIEDAISI 180
           LTVC HVFHQECIDLWLESHKTCPVCRR+L+S    NS +K  D  + S +ESIEDAISI
Sbjct: 142 LTVCYHVFHQECIDLWLESHKTCPVCRRNLDSDSRRNSADKTSDPPRTSRRESIEDAISI 201

Query: 181 EIGDIDDVDADAD-DDDEAPGENRGKQRSETESAAAASEEESRKKFSRSHSTGHSIVKAG 240
           +I + +D +AD+D DDDE    N+GKQR ETE      +EESRKKFSRSHSTG+SIVKA 
Sbjct: 202 DIDEDNDANADSDADDDEGSCSNKGKQRIETEE---MEKEESRKKFSRSHSTGYSIVKAK 261

Query: 241 REGEDQDQDRYKLRLPEHVKIKLVRGHNWTRSCITFEEFLRNPGNGVGISNLSETAHQNN 298
           REGE     R+KL LPEHVKIK++RGHNWT SC+T EE  RNPGNG G+S L ET  +NN
Sbjct: 262 REGE----GRHKLILPEHVKIKILRGHNWTGSCVTLEELARNPGNGGGLSELCETGDRNN 318

BLAST of Sed0020036 vs. TAIR 10
Match: AT4G17920.1 (RING/U-box superfamily protein )

HSP 1 Score: 230.3 bits (586), Expect = 2.0e-60
Identity = 129/278 (46.40%), Postives = 176/278 (63.31%), Query Frame = 0

Query: 6   PRPPFDSHDHPTPPLTIVLSLIFITFLFVGLFSIYFCRCVVESFL------HSRDLRSSP 65
           P+PP     + TPPLT++L++I + F F+G F++YFC+C +++ +      H  D  S  
Sbjct: 11  PQPP--QQHYVTPPLTVILTVILLVFFFIGFFTLYFCKCFLDTMVQAWRLHHGGDTVSDN 70

Query: 66  SDLHPYSDSPTAPPGLDPLLINTFPTFPYSGIKEFRSEKFGLECAICLVEFDDDSFLRLL 125
               P  ++P   PGL+  +IN+FPTFPYS +K+ R EK+GLECAICL+EFD D  LRLL
Sbjct: 71  PLQQP--EAPPVNPGLELRIINSFPTFPYSSVKDLREEKYGLECAICLLEFDGDHVLRLL 130

Query: 126 TVCCHVFHQECIDLWLESHKTCPVCRRDLNSNSPNKAPDAQQISHQESIEDAISIEIGDI 185
           T C HVFHQECIDLW ESH+TCPVCRRDL+   P   P+  + +  E I D I  E  D 
Sbjct: 131 TTCYHVFHQECIDLWFESHRTCPVCRRDLD---PPPPPENTKPTVDEMIIDVIQ-ETSD- 190

Query: 186 DDVDADADDDDEAPGENRGKQRSETESAAAASEEESRKKFSRSHSTGHSIVKAGREGEDQ 245
              D + D   +          S  ++++   E+   +KFSRSHSTGHSIV+     + +
Sbjct: 191 ---DEEDDHHRQQTTTQIDTWPSSGQTSSIKKEQNLPEKFSRSHSTGHSIVR----NKPE 250

Query: 246 DQDRYKLRLPEHVKIKLVRGHNWTRSCITFEEFLRNPG 278
           ++D+Y LRLPEHVKIK+ RGH+ T SC+TF E +RN G
Sbjct: 251 EEDKYTLRLPEHVKIKVTRGHSQTESCVTFAELIRNRG 272

BLAST of Sed0020036 vs. TAIR 10
Match: AT5G46650.1 (RING/U-box superfamily protein )

HSP 1 Score: 194.1 bits (492), Expect = 1.6e-49
Identity = 120/292 (41.10%), Postives = 171/292 (58.56%), Query Frame = 0

Query: 3   NEFPRPPFDSHDHPTPPLTIVLSLIFITFLFVGLFSIYFCRC----VVESFLH--SRDLR 62
           N+    P+    +  PPL I+L++I +   F+G F+IYFC+C    + E++ H     L 
Sbjct: 8   NQNTTVPYPPQHYSKPPLVIILTVILLVVFFIGFFAIYFCKCFYHTLTEAWNHHYHNGLP 67

Query: 63  SSPSDLHPYSDSPTAPPGLDPLLINTFPTFPYSGIKEFRSEKFGLECAICLVEFDDDS-F 122
            +          P   PGL+P +I ++P FP+S +K+ R +K+GLECAICL+EF+++   
Sbjct: 68  ENQIQAQQEPVQPPVNPGLEPHIIQSYPLFPFSSVKDLREDKYGLECAICLLEFEEEHIL 127

Query: 123 LRLLTVCCHVFHQECIDLWLESHKTCPVCRRDLNSNSPNKAPDAQQISHQESIEDAISIE 182
           LRLLT C HVFHQECID WLES+KTCPVCRR+L+ N+P            E+I++ I IE
Sbjct: 128 LRLLTTCYHVFHQECIDQWLESNKTCPVCRRNLDPNAP------------ENIKELI-IE 187

Query: 183 IGDIDDVDADADDDDEAPGENRGKQRSETESAAAASEEES----RK------KFSRSHST 242
           +              E   ENR ++++ T +    S + S    RK      KFSRS +T
Sbjct: 188 V------------IQENAHENRDQEQTSTSNEVMLSRQSSGNNERKIETLPDKFSRSKTT 247

Query: 243 GHSIVKAGREGEDQDQDRYKLRLPEHVKIKLVRGH--NWTRSCITFEEFLRN 276
           GHSIV+     + +++DRY LRLP+HVKIK+ R H  N T SCI+F E +RN
Sbjct: 248 GHSIVR----NKPEEEDRYTLRLPDHVKIKVTRRHNNNQTESCISFGELVRN 270

BLAST of Sed0020036 vs. TAIR 10
Match: AT2G35420.1 (RING/U-box superfamily protein )

HSP 1 Score: 131.0 bits (328), Expect = 1.6e-30
Identity = 87/261 (33.33%), Postives = 126/261 (48.28%), Query Frame = 0

Query: 19  PLTIVLSLIFITFLFVGLFSIYFCRCVVESFLHSRDLRSSPSDLHPYSDSPTAPPGLDPL 78
           P+T+VL+ + +  +F G FS++  + ++     + +L+ +P     +  +P    GLDP 
Sbjct: 22  PVTVVLTGVLLFVIFAGFFSLFLWQFLLNRLFTTWNLQRTPYGDLIHVATPPENTGLDPF 81

Query: 79  LINTFPTFPYSGIKEFRSEKFGLECAICLVEFDDDSFLRLLTVCCHVFHQECIDLWLESH 138
           +I +FP F YS   +   +  G ECAICL EF D+  +RL+TVC H FH  CIDLW E H
Sbjct: 82  IIRSFPVFHYSSATK---KNHGTECAICLSEFSDEDTVRLITVCRHPFHSNCIDLWFELH 141

Query: 139 KTCPVCRRDLNSNSPNKAPDAQQISHQESIEDAISIEIGDIDDVDADADDDDEAPGENRG 198
           KTCPVCR +L+       P        ES  + ++I I DI                N  
Sbjct: 142 KTCPVCRCELD-------PGMIGSGRLESFHNTVTITIQDI----------------NHD 201

Query: 199 KQRSETESAAAASEEESRKKFSRSHSTGHSIVKAGREGEDQDQDRYKLRLPEHVKIKLVR 258
           ++   T  ++    E S  +FSRSHSTGH +VK                      +K  R
Sbjct: 202 EENPPTAGSSKRLIEASAWRFSRSHSTGHFMVKT-----------------TDANVKSKR 239

Query: 259 GHNWTRSCITFEEFLRNPGNG 280
            H  T SC++F+E  R  G G
Sbjct: 262 RHYQTGSCVSFDELTRYEGAG 239

BLAST of Sed0020036 vs. TAIR 10
Match: AT2G35000.1 (RING/U-box superfamily protein )

HSP 1 Score: 127.9 bits (320), Expect = 1.4e-29
Identity = 89/262 (33.97%), Postives = 131/262 (50.00%), Query Frame = 0

Query: 8   PPFDSHDHPTPPLTIVLSLIFITFLFVGLFSIYFCRCVVESFLHSRDLRSSPSDLHP--Y 67
           PP  +   P  P+ +V++++F+   F+ +F   FCR     F  S   RS+ +D      
Sbjct: 39  PPGTTKTKPNDPVVVVITVLFLVIFFM-VFGSIFCRRSNAQFSRSSIFRSTDADAESQVV 98

Query: 68  SDSPTAPPGLDPLLINTFPTFPYSGIKEFRSEKFGLECAICLVEFDDDSFLRLLTVCCHV 127
                   GLD   I TFPTF YS +K  R  K G+ECA+CL EF+DD  LRL+  CCHV
Sbjct: 99  RIRRLTARGLDAEAIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHV 158

Query: 128 FHQECIDLWLESHKTCPVCRRDLNSNSPNKAPDAQQ---------ISHQESIEDAISIEI 187
           FH +C+D+WL  H TCP+CR DL  N      D+ +         IS     E  + +E 
Sbjct: 159 FHADCVDVWLSEHSTCPLCRADLVLNQQGDDDDSTESYSGTDPGTISSSTDPERGMVLES 218

Query: 188 GDIDDVDADADDDDEAPGENRGKQRSETESAAAASEEESRKKFSRSHSTGHSIVKAGREG 247
            D   +DA    +              ++S   +S + +   F RSHSTGHS+++     
Sbjct: 219 SDAHLLDAVTWSNSNI--------TPRSKSTGLSSWQITGILFPRSHSTGHSLIQPA--- 278

Query: 248 EDQDQDRYKLRLPEHVKIKLVR 259
              + DR+ LRLP+ V+ +L++
Sbjct: 279 --GNLDRFTLRLPDDVRRQLMK 286

BLAST of Sed0020036 vs. TAIR 10
Match: AT3G05200.1 (RING/U-box superfamily protein )

HSP 1 Score: 124.4 bits (311), Expect = 1.5e-28
Identity = 89/251 (35.46%), Postives = 130/251 (51.79%), Query Frame = 0

Query: 17  TPPLTIVLSLIFITFLFVGLFSIYFCRCVVESFLHSRDLRSSPS-DLHPYSDSPTAPPGL 76
           +P + +++ ++     F+G FSIYF  C         D   SP+      +    A  GL
Sbjct: 46  SPAMAVIVVILIAALFFMGFFSIYFRHC-----SGVPDAGVSPAGGARSRATVNAAARGL 105

Query: 77  DPLLINTFPTFPYSGIKEFRSEKFGLECAICLVEFDDDSFLRLLTVCCHVFHQECIDLWL 136
           D  ++ TFPTF YS +K  +  K  LECAICL EF+DD  LRLL  C HVFH  CID WL
Sbjct: 106 DVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWL 165

Query: 137 ESHKTCPVCRRDLNSNSPNKAPDAQQISHQESIEDAISIEIGDIDDVDADADDDDEAP-G 196
           E+H TCPVCR +L          A+Q++  ES+E   +    ++  V  + +    AP  
Sbjct: 166 EAHVTCPVCRANL----------AEQVAEGESVEPGGTEPDLELQQVVVNPEPVVTAPVP 225

Query: 197 ENRGKQRSETESAAAASEEESRKKFSRSHSTGHSIVKAGREGEDQDQDRYKLRLPEHVKI 256
           E       ++        +  R KFSRSH+TGHS+V+ G     +  +R+ LRLPE V+ 
Sbjct: 226 EQLVTSEVDSRRLPGVPVDLKRVKFSRSHTTGHSVVQPG-----ECTERFTLRLPEDVRK 276

Query: 257 KLVRGHNWTRS 266
           ++++     R+
Sbjct: 286 RIMKDWKLNRT 276

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022963762.12.4e-10867.41RING-H2 finger protein ATL29 [Cucurbita moschata][more]
XP_023554783.17.0e-10868.05RING-H2 finger protein ATL29 [Cucurbita pepo subsp. pepo][more]
XP_022967655.11.2e-10767.95LOW QUALITY PROTEIN: RING-H2 finger protein ATL29-like, partial [Cucurbita maxim... [more]
KAG6571655.17.7e-10766.77RING-H2 finger protein ATL29, partial [Cucurbita argyrosperma subsp. sororia] >K... [more]
XP_038888539.12.9e-10667.09RING-H2 finger protein ATL29-like [Benincasa hispida][more]
Match NameE-valueIdentityDescription
O496912.8e-5946.40RING-H2 finger protein ATL29 OS=Arabidopsis thaliana OX=3702 GN=ATL29 PE=3 SV=1[more]
Q9FIR02.2e-4841.10RING-H2 finger protein ATL30 OS=Arabidopsis thaliana OX=3702 GN=ATL30 PE=2 SV=1[more]
Q6NKR12.3e-2933.33RING-H2 finger protein ATL28 OS=Arabidopsis thaliana OX=3702 GN=ATL28 PE=2 SV=1[more]
O647632.0e-2833.97E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana OX=3702 GN=ATL9 PE=1 SV... [more]
Q8RXX92.2e-2735.46E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV... [more]
Match NameE-valueIdentityDescription
A0A6J1HG371.2e-10867.41RING-H2 finger protein ATL29 OS=Cucurbita moschata OX=3662 GN=LOC111463956 PE=4 ... [more]
A0A6J1HV345.8e-10867.95LOW QUALITY PROTEIN: RING-H2 finger protein ATL29-like OS=Cucurbita maxima OX=36... [more]
A0A1S3CQ654.6e-10564.58RING-H2 finger protein ATL29-like OS=Cucumis melo OX=3656 GN=LOC103503555 PE=4 S... [more]
A0A6J1ESF82.5e-10367.76RING-H2 finger protein ATL29-like OS=Cucurbita moschata OX=3662 GN=LOC111437314 ... [more]
A0A6J1K7T31.2e-10267.11RING-H2 finger protein ATL29-like OS=Cucurbita maxima OX=3661 GN=LOC111491422 PE... [more]
Match NameE-valueIdentityDescription
AT4G17920.12.0e-6046.40RING/U-box superfamily protein [more]
AT5G46650.11.6e-4941.10RING/U-box superfamily protein [more]
AT2G35420.11.6e-3033.33RING/U-box superfamily protein [more]
AT2G35000.11.4e-2933.97RING/U-box superfamily protein [more]
AT3G05200.11.5e-2835.46RING/U-box superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 103..144
e-value: 2.5E-5
score: 33.7
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 102..145
e-value: 3.1E-13
score: 49.8
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 103..145
score: 12.430266
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 65..151
e-value: 6.7E-19
score: 69.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 278..298
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 228..242
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..242
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 192..221
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 279..298
NoneNo IPR availablePANTHERPTHR14155:SF521RING-H2 FINGER PROTEIN ATL29coord: 4..274
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 4..274
NoneNo IPR availableCDDcd16461RING-H2_EL5_likecoord: 102..145
e-value: 3.98331E-16
score: 68.8759
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 88..152

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0020036.1Sed0020036.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane