Sed0020020 (gene) Chayote v1

Overview


Name	Sed0020020
Type	gene
Organism	Sechium edule (Chayote v1)
Description	AP2/ERF domain-containing transcription factor
Location	LG14: 20095632 .. 20100045 (-)
RNA-Seq Expression	Sed0020020
Synteny	Sed0020020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGCGGCTTTAGGTTTTTATAAAGGAATTTCAGCCCCGGTTTACTCTTCGGATCCTTTAAACGAAGAATTAATGAAAGCACTTGAACCTTTTTTAAAAAGTGCTATTCCAACCTCTTCTTCTTCTTCATTTTCTCAAGGTTTTTCAGAAATTGAACAAATGGGTATTGAGCAATCAGGCCCAATTGGGCTAAACAATCTCACTTCTTCTCAAATTCTCCAAATTCAAGCTCAAATCCAACTACCCATTTCTTCATTTGAATCTCAAATTTCATCTCAATTCAATAACTTTCTTGCTCCAAAATCCATCCCAATGAAGCAGATTGGATCTTTACCTAAGCCGAGTAAATTGTACCGGGGAGTTCGGCAGCGGCATTGGGGAAAATGGGTGGCTGAAATCAGACTCCCCAAGAACAGAACCAGGCTCTGGCTTGGCACTTTCGACACCGCCGAGAACGCGGCGTTGGCCTATGATAAAGCTGCTTACAAGCTCCGAGGGGAATTTGCTCGGCTCAATTTCCCCCATCTCATACAACAATTTGGGGATTTCAATCCACTTCACGCTTCTGTGGATGCAAAACTTGAAGCAATTTGTGAGAGCTTGAAACAGGGGAAAACAGAGGAAACAGAGCAGCTCTGTTCTGGTGATGAACAAAAGCTAATTCCAATTCCAACTCCACCTTCGTCTTCGTCTTCTTCGCTGTCGTCGTCGTCGTCGTGTTCTCGGGTGGAAGATTTACCAACTGGGTCTTCCCCTGAATGCAGCATAAGCTTCTTGGATTTCTCTGATTCTCAATGGGATGAAAATGAATCCTTTTTTTGTTCGGAAAAGTTTTCATCTGTTGAAATTGATTGGGCGGCTCTGAATCAGCTGGCCGAATCAGACTGTTAGTTTTGTGGTTTGAGATTCTGCAATGAAATTTTAGGCATTTGCAGAGGTCATGTGTTGGTGAAAGTGTGGTCTGAAGGTTGTGTTTTTGTTTCCTTGCATGGCCATTTTTTGGTTTTGAGTCTTTTTTATTTTTCTACTTTTAGTTAGTTGATGTAATTAAGCACTTCGTGTTTTTAATACATATCAGTCTCTTCTAATTCTAATTTGATTGCTTTTGAGGTTATGCTCTTAATTTCCTTGGTTTGGAGAATGCTTCATAATTGGATTTGGATCAACCACCCATCAACAGCTTCAGTCTTCCTAGAGGAAATAGCATTCCAACAAAAAAAGAGTCAAAGTCAACACTAACTTGTTTGCACCTCAGTTACAAAACTTCCTACAATGGAAAAGCTAGCTATTCCTAAAGTAATACATAAATTTCTACCTAAGATTAACAAGAAAGTTGTTGTATTTATGGAGTTATCTAAAATAGAATTAACAACTACTAAGAAATTGTTGATTTTTAAGAATTTAACAGCTTATTGCTTGATATTAAAAGGATTTAGTGGACACTCACGCATGTTTGAGCCCCTGTTTATATAAACGGTTGGGTTGATTATAATAACTCAACCGATGTTTATCCATCATTTATTATAAACGGTAGTTACCTAAACTTGCGTGTCCATTTATCTAAACCTTACATATATCATTTTTTGTTTTTGTTACATAATTAATCCCCAAACACCGTTTATCATAATCTATTTTATCACAAGGTTGTTGACTTATTAGTTAATGTTTAGTAAAATATTTCTATTTTTGTTCGAAGACTTTTATCCTCTATTAGGAGGAGCTCTCTTTTTGGAGGAGGAATTTTTCTCTAACACCGAATCTATTTTTTTTAAAGAGGAATCTCCCCCCGACATTGGATCCATTTTAAATGATGATTATATCGGTTTGGTTGTTTTTTTTTTTCAAAGAAAAAAATACTAAGAAATTAGCCTTCATAAGAATAGGAGAAGTTACAAAAGAGTTCTTCCACCTATCCCTAATAGTTATTCCATAAGTTTCTATAATCTGCTTTCATCAAACCCTTCTTGCAAATGGCTCTTTGGAGTATCCGAAAAAAGACTATGAAAATTACTAGATAGTAAAACCAAATCCTAGAGTTTATAGAATTCTATACCCGAATTGTTTTTTAGAATTAAATTTCTACGATTTTATACTCCAAATGATAATAAGGGCTTTAAACTAATCATCCTTAGGCACTCTAGAACAAAGCCTTTTTCCATAAATCAGCTCTAGAAACCGTCATATTAAAATAGGAGTTCAAATCTAAAAAGTGAAAACCAAGGAAAAATCTTCTTCCATACCCTTATAGACACTTTATGGTCTTTAAGAATATGCATATTGAATTCTCTATCCTTGTTACAAAGCGGGTAACAAACCTCAATATCAATCTATCTATTATAAATATTGTATTTAGAAGGTTTTTTTACTCTTCTCATAATCATTTTTTATTCTCTATTATTACTTTTTGTTCTAGCTCCTTATCCTCTTTAACAGTTCTCCTTATAATTATTATCTTCCGAGTTCTGGCAATGATTTTTTTTTTAATTTTTTAATCTATTTTATACTCTTCTCCTAATTCTCATTCAAACACACCTTATTAAGAGAAAAAAAAAAAAAACAATCTCAATATAATTATTCCTCTTTGAAATCATCATCTTAGATTGAATTTAAATTTGTGTATTATCCGCTCACGTTGTCAAAGCAAACAAGGTGAAAATTTTCGCAATTACCTTCTTCAAAAATCAGTCTCTTTTAATTTTTAATTTTAGATTGAATTTGAATGTGTGCATTGAATAAATGCCTAAATTTTATACCATATCAAATAAAATAATAATTAGTAAGGAGAGAAATAATCATGTTGTAAAACACAATTAGAATTCACTCCATAAACCTCAAAATGCATTACAATGCACAAAAACACTATGCTTCCCCACACCACTTTTAATTTTAACCTTTAACCTTTTTCTAGTACAAATAAATTAGGGGTTTTACACGTATAACAAAAAAAGACAAAATATTTTCATCTATAACATAAAATCAAAGCTAATTCATTTGTAGCAAAAAATTCAAATTGAATTCTATCATTAGTTGAATTCTATTAGTGATAGAATTCAATCAATGAAAGACTTCTTCTATCACCACTTGAATTTTCTATTAGTGATAGAATTTCAAAATTGAGTTCTATCACTAGTTGAGTTTTATCACTGATAGAAATTAATATGTTATAGATGAAATTATTTTATAAATTGTGTTGCAAATGTAATACAAAAGCTAAAATGTGATGCTGATGGTAAATTTTTAATAAATTATGAGTGGAAACCACGAGTCGTACTATTATTTTAAAAATAAATTACCGATTCAAAATAAAATTCTTAATTTTATTGTTGAAATGAATTACCACAAAATAATGAAATTATTAGACCACTAACTATTAACAAGTTGTTAAAGAAGACTAAATCGTGGCCATTCCTTTTCACTCGTTTTTGTTTGGATCTATTAATTGTGAATAATATCTCTAATTTGGATCATATTCCTCCTCACCCTCATCTCTTGGAATTTAAAATCAAAAGACAAAGATAAGCATCTTCTTTTCCTTTGGAGACTATAAATAATAAACTATTATAAAGCCAACTTGCAGAAAAGTCAACACAGAAGATTCTCCATAAACAAACATGGGGGAAATGATAGAAATAAAAAAAATATTTAGATGGTTCAAAATTCTTCTACTCTTTTCAATTTGTCTCTCCCTGTTCTATGATTTGATTATTATTTTTTGTACACCTCTTTTATTTATTTATTTATTTATTTATTTATTTATTCAATTGTTGCTCAACTTTAGTTGAACGGTGGATAAACGTCCCAGCACTACTTGCAAATATTTGACCTTTGAAAATGGAAAATGTTAAAGAGATGAAAATTAGAGAACATGTGAGTTGGATTAATTATATCCTCTTGGCACATAGGTTACTCACTTATTGATTTGTTTCATTGATTGTATTGAAATTTAACTTCATTGATCGTTATAAATTTAATCTTGAAAATAGATACTTGATTCTCCCTTATTTAAGAGTAATAATAAGGGCTAACATGAGCCGTCGCTCAGCGACATTAGCGTATGTTCAATGATCAAAGATTTTGGGTTCGAGTCTTCCCCGCCCTCAATTATTGTAATCTCAAAAAAAAAAGGAGTAATAATAAGGTTTAAGTGCTCCAATTACATATGGTGATTTATCAATAAAGAGTTAATGTTAATGGTCCTTCTAAATGCATAGCAGATTTCCAAGTGTCGGTTATTGATGATGCTTTCGTTAATATATATTAAATATACTTTCTAATGTAATTGTAAATAGAGAGTTGTGAATGAGAATATATATAAATTTGTAGGGATCTTATCGAAGGAGGGAGTGGTTTGATGATTTCATTGTTTGGAGGAAATTCAGTTCAACACTATCATCACGATTTAAATCTCTAA

mRNA sequence

ATGTCGGCGGCTTTAGGTTTTTATAAAGGAATTTCAGCCCCGGTTTACTCTTCGGATCCTTTAAACGAAGAATTAATGAAAGCACTTGAACCTTTTTTAAAAAGTGCTATTCCAACCTCTTCTTCTTCTTCATTTTCTCAAGGTTTTTCAGAAATTGAACAAATGGGTATTGAGCAATCAGGCCCAATTGGGCTAAACAATCTCACTTCTTCTCAAATTCTCCAAATTCAAGCTCAAATCCAACTACCCATTTCTTCATTTGAATCTCAAATTTCATCTCAATTCAATAACTTTCTTGCTCCAAAATCCATCCCAATGAAGCAGATTGGATCTTTACCTAAGCCGAGTAAATTGTACCGGGGAGTTCGGCAGCGGCATTGGGGAAAATGGGTGGCTGAAATCAGACTCCCCAAGAACAGAACCAGGCTCTGGCTTGGCACTTTCGACACCGCCGAGAACGCGGCGTTGGCCTATGATAAAGCTGCTTACAAGCTCCGAGGGGAATTTGCTCGGCTCAATTTCCCCCATCTCATACAACAATTTGGGGATTTCAATCCACTTCACGCTTCTGTGGATGCAAAACTTGAAGCAATTTGTGAGAGCTTGAAACAGGGGAAAACAGAGGAAACAGAGCAGCTCTGTTCTGGTGATGAACAAAAGCTAATTCCAATTCCAACTCCACCTTCGTCTTCGTCTTCTTCGCTGTCGTCGTCGTCGTCGTGTTCTCGGGTGGAAGATTTACCAACTGGGTCTTCCCCTGAATGCAGCATAAGCTTCTTGGATTTCTCTGATTCTCAATGGGATGAAAATGAATCCTTTTTTTGTTCGGAAAAGTTTTCATCTGTTGAAATTGATTGGGCGGCTCTGAATCAGCTGGCCGAATCAGACTCTTATTGCTTGATATTAAAAGGATTTAGTGGACACTCACGCATGTTTGAGCCCCTGGATCTTATCGAAGGAGGGAGTGGTTTGATGATTTCATTGTTTGGAGGAAATTCAGTTCAACACTATCATCACGATTTAAATCTCTAA

Coding sequence (CDS)

ATGTCGGCGGCTTTAGGTTTTTATAAAGGAATTTCAGCCCCGGTTTACTCTTCGGATCCTTTAAACGAAGAATTAATGAAAGCACTTGAACCTTTTTTAAAAAGTGCTATTCCAACCTCTTCTTCTTCTTCATTTTCTCAAGGTTTTTCAGAAATTGAACAAATGGGTATTGAGCAATCAGGCCCAATTGGGCTAAACAATCTCACTTCTTCTCAAATTCTCCAAATTCAAGCTCAAATCCAACTACCCATTTCTTCATTTGAATCTCAAATTTCATCTCAATTCAATAACTTTCTTGCTCCAAAATCCATCCCAATGAAGCAGATTGGATCTTTACCTAAGCCGAGTAAATTGTACCGGGGAGTTCGGCAGCGGCATTGGGGAAAATGGGTGGCTGAAATCAGACTCCCCAAGAACAGAACCAGGCTCTGGCTTGGCACTTTCGACACCGCCGAGAACGCGGCGTTGGCCTATGATAAAGCTGCTTACAAGCTCCGAGGGGAATTTGCTCGGCTCAATTTCCCCCATCTCATACAACAATTTGGGGATTTCAATCCACTTCACGCTTCTGTGGATGCAAAACTTGAAGCAATTTGTGAGAGCTTGAAACAGGGGAAAACAGAGGAAACAGAGCAGCTCTGTTCTGGTGATGAACAAAAGCTAATTCCAATTCCAACTCCACCTTCGTCTTCGTCTTCTTCGCTGTCGTCGTCGTCGTCGTGTTCTCGGGTGGAAGATTTACCAACTGGGTCTTCCCCTGAATGCAGCATAAGCTTCTTGGATTTCTCTGATTCTCAATGGGATGAAAATGAATCCTTTTTTTGTTCGGAAAAGTTTTCATCTGTTGAAATTGATTGGGCGGCTCTGAATCAGCTGGCCGAATCAGACTCTTATTGCTTGATATTAAAAGGATTTAGTGGACACTCACGCATGTTTGAGCCCCTGGATCTTATCGAAGGAGGGAGTGGTTTGATGATTTCATTGTTTGGAGGAAATTCAGTTCAACACTATCATCACGATTTAAATCTCTAA

Protein sequence

MSAALGFYKGISAPVYSSDPLNEELMKALEPFLKSAIPTSSSSSFSQGFSEIEQMGIEQSGPIGLNNLTSSQILQIQAQIQLPISSFESQISSQFNNFLAPKSIPMKQIGSLPKPSKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAENAALAYDKAAYKLRGEFARLNFPHLIQQFGDFNPLHASVDAKLEAICESLKQGKTEETEQLCSGDEQKLIPIPTPPSSSSSSLSSSSSCSRVEDLPTGSSPECSISFLDFSDSQWDENESFFCSEKFSSVEIDWAALNQLAESDSYCLILKGFSGHSRMFEPLDLIEGGSGLMISLFGGNSVQHYHHDLNL

Homology

[Close]

BLAST of Sed0020020 vs. NCBI nr
Match: XP_022133397.1 (ethylene-responsive transcription factor ERF060 [Momordica charantia])

HSP 1 Score: 404.8 bits (1039), Expect = 7.3e-109
Identity = 228/331 (68.88%), Postives = 251/331 (75.83%), Query Frame = 0


Query: 1   MSAALGFYKGISAPVYSSDPLNEELMKALEPFLKSAIPTSSSSS---------------- 60
           M+AA+  Y GIS P YSSDP +EELMKAL+PF+KS I TSSSSS                
Sbjct: 1   MAAAIDVYSGISTPGYSSDPFSEELMKALQPFMKSVISTSSSSSSSSAYSPASSQPELSP 60

Query: 61  ----------FSQGFSEIEQMGIEQSGPIGLNNLTSSQILQIQAQIQLPISSFES----Q 120
                     FSQGFS IEQMG+EQSGPIGLNNLT SQILQIQAQIQ+P  S  S    Q
Sbjct: 61  DFCSPSSTRLFSQGFSSIEQMGLEQSGPIGLNNLTXSQILQIQAQIQIPPQSMPSFSAAQ 120

Query: 121 ISSQFNNFLAPKSIPMKQIGSLPKPSKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDT 180
           ISSQ++NFLAPKSIPMK +GS PKP+KLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDT
Sbjct: 121 ISSQYHNFLAPKSIPMKHVGSPPKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDT 180

Query: 181 AENAALAYDKAAYKLRGEFARLNFPHLIQQFGDFNPLHASVDAKLEAICESLKQGKTEET 240
           AE AALAYDKAAYKLRG+FARLNFPHL  QFGDF PLH SVDAKL+AIC+SLKQGK   T
Sbjct: 181 AEEAALAYDKAAYKLRGDFARLNFPHLKHQFGDFKPLHPSVDAKLQAICQSLKQGK---T 240

Query: 241 EQLCSGDEQKL-----IPIPTPPSSSSSSLSSSSSCSRVEDLPTGSSPECSISFLDFSDS 297
           EQLCS  ++KL     + + T   +S SS SSSSS SR ED  TGSSPE SISFLDFSD 
Sbjct: 241 EQLCSVADEKLTTPPELELKTEVETSPSSSSSSSSPSRSEDYSTGSSPESSISFLDFSDY 300

[Close]

BLAST of Sed0020020 vs. NCBI nr
Match: XP_038882480.1 (ethylene-responsive transcription factor ERF056 [Benincasa hispida])

HSP 1 Score: 399.1 bits (1024), Expect = 4.0e-107
Identity = 225/345 (65.22%), Postives = 247/345 (71.59%), Query Frame = 0


Query: 1   MSAALGFYKGISAPVYSSDPLNEELMKALEPFLKSAIPTSSSSS---------------- 60
           M+AA+  Y GIS PVYSSDP +EELMKAL+PF+KSAI TSSSSS                
Sbjct: 1   MAAAIDIYSGISTPVYSSDPFSEELMKALQPFMKSAISTSSSSSSSSSLSLPSPSISSQP 60

Query: 61  --------------FSQGFSEIEQMGIEQSGPIGLNNLTSSQILQIQAQIQLP---ISSF 120
                         FSQGFS IEQMG EQSGPIGLNNLT SQILQIQAQIQLP   +SSF
Sbjct: 61  WLSPDFCSPSSTRLFSQGFSGIEQMGFEQSGPIGLNNLTPSQILQIQAQIQLPQTTMSSF 120

Query: 121 ESQISSQFNNFLAPKSIPMKQIGSLPKPSKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGT 180
            S   SQ++NFLAPKSIPMK IGS PKP+KLYRGVRQRHWGKWVAEIRLPKNRTRLWLGT
Sbjct: 121 SSSFQSQYHNFLAPKSIPMKHIGSPPKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGT 180

Query: 181 FDTAENAALAYDKAAYKLRGEFARLNFPHLIQQFGDFNPLHASVDAKLEAICESLKQGKT 240
           FDTAE AALAYDKAAYKLRG+FARLNFPHL  QFGDF PLH SVDAKL+AIC+ LKQGK 
Sbjct: 181 FDTAEEAALAYDKAAYKLRGDFARLNFPHLKHQFGDFKPLHPSVDAKLQAICQGLKQGK- 240

Query: 241 EETEQLCSGDEQKLIPIPTPPSSS----------------SSSLSSSSSCSRVEDLPTGS 297
             TE+LCS +++K      P  S+                +SS SSSSS  R ED  + S
Sbjct: 241 --TEKLCSAEDEKPTTSALPSESNAVVNNFWEPELKSEVETSSSSSSSSPLRSEDYSSES 300

[Close]

BLAST of Sed0020020 vs. NCBI nr
Match: XP_023544546.1 (ethylene-responsive transcription factor ERF060-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 395.2 bits (1014), Expect = 5.8e-106
Identity = 227/345 (65.80%), Postives = 248/345 (71.88%), Query Frame = 0


Query: 1   MSAALGFYKGISAPVYSSDPLNEELMKALEPFLKSAIPTSSSSS---------------- 60
           M+AA+  Y GIS  VY SDP +EELMKAL+PF+KSA+ TS SSS                
Sbjct: 1   MAAAIDVYTGISTQVYCSDPFSEELMKALQPFMKSAVSTSYSSSSSSSVSCQPILSTDVC 60

Query: 61  -------FSQGFSEIEQMGIEQSGPIGLNNLTSSQILQIQAQIQLP------ISSFESQI 120
                  FSQGFS IEQMGIEQSGPIGLNNLT SQI QIQAQIQLP      +SS  S  
Sbjct: 61  SPSSTCLFSQGFSGIEQMGIEQSGPIGLNNLTPSQICQIQAQIQLPQQTMSSLSSSSSSF 120

Query: 121 SSQFNNFLAPKSIPMKQIGSLPKPSKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTA 180
            SQ+ NFLAPKSIPMK IGS  KP+KLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDT+
Sbjct: 121 QSQYCNFLAPKSIPMKLIGSPSKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTS 180

Query: 181 ENAALAYDKAAYKLRGEFARLNFPHLIQQFGDFNPLHASVDAKLEAICESLKQGKTEETE 240
           E AALAYDKAAYKLRGEFARLNFPHL  QFG+F PLH SVDAKL+AICESLKQGK   TE
Sbjct: 181 EEAALAYDKAAYKLRGEFARLNFPHLKHQFGEFKPLHPSVDAKLQAICESLKQGK---TE 240

Query: 241 QLCSGDEQKLIPIPTP--------------------PSSSSSSLSSSSSCSRVEDLPTGS 297
           +LCS +++K    P P                     SSSSSS  SSSS SR E+L TGS
Sbjct: 241 KLCSAEDEKANTSPPPSESNLVVDNYWEPELKSEVETSSSSSSSFSSSSPSRSEELSTGS 300

[Close]

BLAST of Sed0020020 vs. NCBI nr
Match: XP_022949926.1 (ethylene-responsive transcription factor ERF060-like [Cucurbita moschata])

HSP 1 Score: 392.9 bits (1008), Expect = 2.9e-105
Identity = 225/342 (65.79%), Postives = 246/342 (71.93%), Query Frame = 0


Query: 1   MSAALGFYKGISAPVYSSDPLNEELMKALEPFLKSAIPTSSSSS---------------- 60
           M+AA+  Y GIS  VYSSDP +EELMKA +PF+KSA+ TS SSS                
Sbjct: 1   MAAAIDVYTGISTQVYSSDPFSEELMKAFQPFMKSAVSTSYSSSSSSSSVSCQPRLSTAV 60

Query: 61  --------FSQGFSEIEQMGIEQSGPIGLNNLTSSQILQIQAQIQLP------ISSFESQ 120
                   FSQGFS IEQMG+EQSGPIGLNNLT SQI QIQAQIQLP      +SS  S 
Sbjct: 61  CSPSSTCLFSQGFSGIEQMGLEQSGPIGLNNLTPSQICQIQAQIQLPPQTMSSLSSSSSS 120

Query: 121 ISSQFNNFLAPKSIPMKQIGSLPKPSKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDT 180
             SQ+ NFLAPKSIPMK IGS  KP+KLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDT
Sbjct: 121 FQSQYCNFLAPKSIPMKLIGSPSKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDT 180

Query: 181 AENAALAYDKAAYKLRGEFARLNFPHLIQQFGDFNPLHASVDAKLEAICESLKQGKTEET 240
           +E AALAYDKAAYKLRGEFARLNFPHL  QFG+F PLH SVDAKL+AICESLKQGK   T
Sbjct: 181 SEEAALAYDKAAYKLRGEFARLNFPHLKHQFGEFKPLHPSVDAKLQAICESLKQGK---T 240

Query: 241 EQLCSGDEQKLIPIPTPPSS------------------SSSSLSSSSSCSRVEDLPTGSS 295
           E+LCS +++K    P P  S                  SSSS SSSSS SR E+L TGSS
Sbjct: 241 EKLCSAEDEKANTSPPPLESNLVVDNYWEPELKSEVETSSSSSSSSSSPSRSEELSTGSS 300

[Close]

BLAST of Sed0020020 vs. NCBI nr
Match: KAG7034188.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 390.6 bits (1002), Expect = 1.4e-104
Identity = 225/352 (63.92%), Postives = 249/352 (70.74%), Query Frame = 0


Query: 1   MSAALGFYKGISAPVYSSDPLNEELMKALEPFLKSAIPTSSSSS---------------- 60
           M+AA+  Y GIS  VYSSDP +EELMKAL+PF+KSA+ +S SSS                
Sbjct: 1   MAAAIDVYTGISTQVYSSDPFSEELMKALQPFMKSAVSSSYSSSSSSSSSSVSSSVSCQP 60

Query: 61  --------------FSQGFSEIEQMGIEQSGPIGLNNLTSSQILQIQAQIQLP------I 120
                         FSQGFS IE+MG+EQSGPIGLNNLT SQI QIQAQIQLP      +
Sbjct: 61  RLSTDVCSSSSTCLFSQGFSGIEKMGLEQSGPIGLNNLTPSQICQIQAQIQLPPQTMSSL 120

Query: 121 SSFESQISSQFNNFLAPKSIPMKQIGSLPKPSKLYRGVRQRHWGKWVAEIRLPKNRTRLW 180
           SS  S   SQ+ NFLAPKSIPMK IGS  KP+KLYRGVRQRHWGKWVAEIRLPKNRTRLW
Sbjct: 121 SSSSSSFQSQYCNFLAPKSIPMKLIGSPSKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLW 180

Query: 181 LGTFDTAENAALAYDKAAYKLRGEFARLNFPHLIQQFGDFNPLHASVDAKLEAICESLKQ 240
           LGTFDT+E AALAYDKAAYKLRGEFARLNFPHL  QFG+F PLH SVDAKL+AICESLKQ
Sbjct: 181 LGTFDTSEEAALAYDKAAYKLRGEFARLNFPHLKHQFGEFKPLHPSVDAKLQAICESLKQ 240

Query: 241 GKTEETEQLCSGDEQKLIPIPTP--------------------PSSSSSSLSSSSSCSRV 297
           GK   TE+LCS +++K    P P                     SSSSSS  SSSS SR 
Sbjct: 241 GK---TEKLCSAEDEKANTSPPPSESNLVVDNYWEPELKSEVETSSSSSSSFSSSSPSRS 300

[Close]

BLAST of Sed0020020 vs. ExPASy Swiss-Prot
Match: O65665 (Ethylene-responsive transcription factor ERF060 OS=Arabidopsis thaliana OX=3702 GN=ERF060 PE=1 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 6.7e-57
Identity = 149/287 (51.92%), Postives = 182/287 (63.41%), Query Frame = 0


Query: 17  SSDPLNEELMKALEPFLKSAIPTSSSSSFSQGFSEIEQMGIEQSGPIGLNNLTSSQILQI 76
           ++DP  EELMKAL+P+      T+++ S S  +S     G  Q+  +GLN LT  QI QI
Sbjct: 10  NTDPFQEELMKALQPY------TTNTDSSSPTYSN-TVFGFNQTTSLGLNQLTPYQIHQI 69

Query: 77  QAQIQLPISSFESQISSQFNNFLAPKSIPMKQIGSLPKPSKLYRGVRQRHWGKWVAEIRL 136
           Q Q+        +Q  +  +  LAPK +PMK + +     KLYRGVRQRHWGKWVAEIRL
Sbjct: 70  QNQL--------NQRRNIISPNLAPKPVPMKNMTA----QKLYRGVRQRHWGKWVAEIRL 129

Query: 137 PKNRTRLWLGTFDTAENAALAYDKAAYKLRGEFARLNFPHLIQQFG------DFNPLHAS 196
           PKNRTRLWLGTFDTAE AA+AYD AAYKLRGEFARLNFP    + G       FNPLH+S
Sbjct: 130 PKNRTRLWLGTFDTAEEAAMAYDLAAYKLRGEFARLNFPQFRHEDGYYGGGSCFNPLHSS 189

Query: 197 VDAKLEAICESLKQGKTEETEQLCSGDEQKLIPIPTP-PSSSSSSLSSSSSCSRVEDLPT 256
           VDAKL+ IC+SL+  KTE+ +  CS  E +L P  T    S    L S  +    E    
Sbjct: 190 VDAKLQEICQSLR--KTEDIDLPCS--ETELFPPKTEYQESEYGFLRSDENSFSDESHVE 249

Query: 257 GSSPECSI-SFLDFSDSQWDENESFFCSEKFSSVEIDWAALNQLAES 296
            SSPE  I +FLDFSDS +DE  SF   EKF SVEIDW A+++L+ES
Sbjct: 250 SSSPESGITTFLDFSDSGFDEIGSFGL-EKFPSVEIDWDAISKLSES 272

[Close]

BLAST of Sed0020020 vs. ExPASy Swiss-Prot
Match: Q8H1E4 (Ethylene-responsive transcription factor RAP2-4 OS=Arabidopsis thaliana OX=3702 GN=RAP2-4 PE=1 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 9.7e-56
Identity = 144/321 (44.86%), Postives = 184/321 (57.32%), Query Frame = 0


Query: 24  ELMKALEPFLKSAIPTSSSSS-------------------------------FSQGFSEI 83
           ELM AL PF+KS   + SSSS                               FS G S++
Sbjct: 20  ELMDALVPFIKSVSDSPSSSSAASASAFLHPSAFSLPPLPGYYPDSTFLTQPFSYG-SDL 79

Query: 84  EQMGIEQSGPIGLNNLTSSQILQIQAQIQLPISSFESQISSQFNNFLAPKSIPMKQIG-- 143
           +Q G      IGLNNL+SSQI QIQ+QI  P+       ++ F+N L+PK + MKQ G  
Sbjct: 80  QQTG----SLIGLNNLSSSQIHQIQSQIHHPLPPTHHNNNNSFSNLLSPKPLLMKQSGVA 139

Query: 144 --------SLP-KPSKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAENAALAYDKA 203
                    +P KP+KLYRGVRQRHWGKWVAEIRLP+NRTRLWLGTFDTAE AALAYDKA
Sbjct: 140 GSCFAYGSGVPSKPTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDKA 199

Query: 204 AYKLRGEFARLNFP-------HLIQQFGDFNPLHASVDAKLEAICESLKQGKTEETEQLC 263
           AYKLRG+FARLNFP       H+   FG++ PLH+SVDAKLEAIC+S+ + + ++     
Sbjct: 200 AYKLRGDFARLNFPNLRHNGSHIGGDFGEYKPLHSSVDAKLEAICKSMAETQKQDKSTKS 259

Query: 264 SGDEQKLIPIP-----TPPSSSSSSLSSSSSCSRVEDLPTGSSPECSISFLDFSD-SQWD 290
           S   +K +  P          +S S+  S   +  E+   GSSP   ++F D  +  QW+
Sbjct: 260 SKKREKKVSSPDLSEKVKAEENSVSIGGSPPVTEFEESTAGSSPLSDLTFADPEEPPQWN 319

[Close]

BLAST of Sed0020020 vs. ExPASy Swiss-Prot
Match: Q9FJQ2 (Ethylene-responsive transcription factor ERF057 OS=Arabidopsis thaliana OX=3702 GN=ERF057 PE=2 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 8.2e-47
Identity = 128/289 (44.29%), Postives = 165/289 (57.09%), Query Frame = 0


Query: 23  EELMKALEPFLKSAIPTSSSSSFSQGFSEIEQMGI----------EQSGPIGLNNLTSSQ 82
           +E M+ALEPF+K  + +SSS+S S     +    I           Q+GPIGLN LT +Q
Sbjct: 10  DEFMEALEPFMK--VTSSSSTSNSSNPKPLTPNFIPNNDQVLPVSNQTGPIGLNQLTPTQ 69

Query: 83  ILQIQAQIQLPISSFESQISSQFNNFLAPKSIPMKQIGSLPKPSKLYRGVRQRHWGKWVA 142
           ILQIQ ++ L  +    +  S   + L  K   MK+I    KP KLYRGVRQR WGKWVA
Sbjct: 70  ILQIQTELHLRQNQSRRRAGS---HLLTAKPTSMKKIDVATKPVKLYRGVRQRQWGKWVA 129

Query: 143 EIRLPKNRTRLWLGTFDTAENAALAYDKAAYKLRGEFARLNFPHLIQQFGDFNPLHASVD 202
           EIRLPKNRTRLWLGTF+TA+ AALAYD+AA+K+RG+ ARLNFP +++Q      L  S++
Sbjct: 130 EIRLPKNRTRLWLGTFETAQEAALAYDQAAHKIRGDNARLNFPDIVRQGHYKQILSPSIN 189

Query: 203 AKLEAICESL--------KQGKTEETEQLCSGDEQKLIPIPTPPSSSSSSLSSSSSCSRV 262
           AK+E+IC S         KQ KTEE     S  E++                    C   
Sbjct: 190 AKIESICNSSDLPLPQIEKQNKTEEVLSGFSKPEKE------------PEFGEIYGCGY- 249

Query: 263 EDLPTGSSPECSISFLDFSDSQWDENESFFCS-EKFSSVEIDWAALNQL 293
               +GSSPE  I+ LDFS     E+ESF     K+ S+EIDW A+ +L
Sbjct: 250 ----SGSSPESDITLLDFSSDCVKEDESFLMGLHKYPSLEIDWDAIEKL 276

[Close]

BLAST of Sed0020020 vs. ExPASy Swiss-Prot
Match: Q9LM15 (Ethylene-responsive transcription factor RAP2-13 OS=Arabidopsis thaliana OX=3702 GN=RAP2-13 PE=1 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.8e-46
Identity = 133/300 (44.33%), Postives = 173/300 (57.67%), Query Frame = 0


Query: 1   MSAALGFYKGISAPVYSSDPLNEELMKALEPFLKSAIPTSSSSSFSQGFSEIEQMGIEQS 60
           M+ ++ FY   +     SDP   ELM+AL PF+KS  P++ SS+F+  FS          
Sbjct: 1   MTTSMDFYS--NKTFQQSDPFGGELMEALLPFIKS--PSNDSSAFA--FS---------- 60

Query: 61  GPIGLNNLTSSQILQIQAQIQLPISSFESQISSQFNNFLAPKSIPMKQIG-SLPKPSKLY 120
                              +  PI S+ S + S F++ L+PK + MKQ G S  KP+KLY
Sbjct: 61  -------------------LPAPI-SYGSDLHS-FSHHLSPKPVSMKQTGTSAAKPTKLY 120

Query: 121 RGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAENAALAYDKAAYKLRGEFARLNFPHLIQ 180
           RGVRQRHWGKWVAEIRLP+NRTRLWLGTFDTAE AALAYDKAAYKLRG+FARLNFP L +
Sbjct: 121 RGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPDL-R 180

Query: 181 QFGDFNPLHASVDAKLEAICESL---KQGKTEETEQLCSGDEQKLIPIPTPPSSSSSSLS 240
              ++ PL +SVDAKLEAIC++L    Q +   T++  S      + +  P    S   S
Sbjct: 181 HNDEYQPLQSSVDAKLEAICQNLAETTQKQVRSTKKSSSRKRSSTVAVKLPEEDYS---S 240

Query: 241 SSSSCSRVEDLPTG--SSPECSISFLDFSDS---QWDENESFFCSEKFSSVEIDWAALNQ 292
           + SS    E   +G  SSP   ++F D  +     W+EN      EK+ S EIDW ++ Q
Sbjct: 241 AGSSPLLTESYGSGGSSSPLSELTFGDTEEEIQPPWNEN----ALEKYPSYEIDWDSILQ 255

[Close]

BLAST of Sed0020020 vs. ExPASy Swiss-Prot
Match: Q9SIE4 (Ethylene-responsive transcription factor ERF056 OS=Arabidopsis thaliana OX=3702 GN=ERF056 PE=2 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.4e-46
Identity = 127/263 (48.29%), Postives = 163/263 (61.98%), Query Frame = 0


Query: 56  GIEQSGPIGLNNLTSSQILQIQAQIQLPISSFESQISSQFNNFLAPKSIPMKQI-GSLPK 115
           G+ +S P+GLN LT  QI QIQ Q    ++   S IS+     L+P  I MK +  S  K
Sbjct: 16  GVNKSMPLGLNQLTPYQIHQIQNQ----LNHRRSTISN-----LSPNRIRMKNLTPSTSK 75

Query: 116 PSKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAENAALAYDKAAYKLRGEFARLNF 175
              LYRGVRQRHWGKWVAEIRLPKNRTRLWLGTF+TAE AALAYD+AA++LRG+ A+LNF
Sbjct: 76  TKNLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFETAEKAALAYDQAAFQLRGDIAKLNF 135

Query: 176 PHLIQQFGDFNPLHASVDAKLEAICESLKQGKTEETEQLCSGDEQK-------------- 235
           P+LI +  D NPL +SVD KL+AIC+SL+     +TE++CS  +Q               
Sbjct: 136 PNLIHE--DMNPLPSSVDTKLQAICKSLR-----KTEEICSVSDQTKEYSVYSVSDKTEL 195

Query: 236 LIP-----IPTPPSSSSSSLSSSSSCSRVEDLPTGSSPECSIS---FLDFSDSQWDENES 295
            +P     +P      ++ LS+ S  S    L   S  E S S   FLDFSD++++E  S
Sbjct: 196 FLPKAELFLPKREHLETNELSNESPRSDETSLLDESQAEYSSSDKTFLDFSDTEFEEIGS 255

[Close]

BLAST of Sed0020020 vs. ExPASy TrEMBL
Match: A0A6J1BWJ7 (ethylene-responsive transcription factor ERF060 OS=Momordica charantia OX=3673 GN=LOC111005977 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 3.5e-109
Identity = 228/331 (68.88%), Postives = 251/331 (75.83%), Query Frame = 0


Query: 1   MSAALGFYKGISAPVYSSDPLNEELMKALEPFLKSAIPTSSSSS---------------- 60
           M+AA+  Y GIS P YSSDP +EELMKAL+PF+KS I TSSSSS                
Sbjct: 1   MAAAIDVYSGISTPGYSSDPFSEELMKALQPFMKSVISTSSSSSSSSAYSPASSQPELSP 60

Query: 61  ----------FSQGFSEIEQMGIEQSGPIGLNNLTSSQILQIQAQIQLPISSFES----Q 120
                     FSQGFS IEQMG+EQSGPIGLNNLT SQILQIQAQIQ+P  S  S    Q
Sbjct: 61  DFCSPSSTRLFSQGFSSIEQMGLEQSGPIGLNNLTXSQILQIQAQIQIPPQSMPSFSAAQ 120

Query: 121 ISSQFNNFLAPKSIPMKQIGSLPKPSKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDT 180
           ISSQ++NFLAPKSIPMK +GS PKP+KLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDT
Sbjct: 121 ISSQYHNFLAPKSIPMKHVGSPPKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDT 180

Query: 181 AENAALAYDKAAYKLRGEFARLNFPHLIQQFGDFNPLHASVDAKLEAICESLKQGKTEET 240
           AE AALAYDKAAYKLRG+FARLNFPHL  QFGDF PLH SVDAKL+AIC+SLKQGK   T
Sbjct: 181 AEEAALAYDKAAYKLRGDFARLNFPHLKHQFGDFKPLHPSVDAKLQAICQSLKQGK---T 240

Query: 241 EQLCSGDEQKL-----IPIPTPPSSSSSSLSSSSSCSRVEDLPTGSSPECSISFLDFSDS 297
           EQLCS  ++KL     + + T   +S SS SSSSS SR ED  TGSSPE SISFLDFSD 
Sbjct: 241 EQLCSVADEKLTTPPELELKTEVETSPSSSSSSSSPSRSEDYSTGSSPESSISFLDFSDY 300

[Close]

BLAST of Sed0020020 vs. ExPASy TrEMBL
Match: A0A6J1GDE5 (ethylene-responsive transcription factor ERF060-like OS=Cucurbita moschata OX=3662 GN=LOC111453173 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 1.4e-105
Identity = 225/342 (65.79%), Postives = 246/342 (71.93%), Query Frame = 0


Query: 1   MSAALGFYKGISAPVYSSDPLNEELMKALEPFLKSAIPTSSSSS---------------- 60
           M+AA+  Y GIS  VYSSDP +EELMKA +PF+KSA+ TS SSS                
Sbjct: 1   MAAAIDVYTGISTQVYSSDPFSEELMKAFQPFMKSAVSTSYSSSSSSSSVSCQPRLSTAV 60

Query: 61  --------FSQGFSEIEQMGIEQSGPIGLNNLTSSQILQIQAQIQLP------ISSFESQ 120
                   FSQGFS IEQMG+EQSGPIGLNNLT SQI QIQAQIQLP      +SS  S 
Sbjct: 61  CSPSSTCLFSQGFSGIEQMGLEQSGPIGLNNLTPSQICQIQAQIQLPPQTMSSLSSSSSS 120

Query: 121 ISSQFNNFLAPKSIPMKQIGSLPKPSKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDT 180
             SQ+ NFLAPKSIPMK IGS  KP+KLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDT
Sbjct: 121 FQSQYCNFLAPKSIPMKLIGSPSKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDT 180

Query: 181 AENAALAYDKAAYKLRGEFARLNFPHLIQQFGDFNPLHASVDAKLEAICESLKQGKTEET 240
           +E AALAYDKAAYKLRGEFARLNFPHL  QFG+F PLH SVDAKL+AICESLKQGK   T
Sbjct: 181 SEEAALAYDKAAYKLRGEFARLNFPHLKHQFGEFKPLHPSVDAKLQAICESLKQGK---T 240

Query: 241 EQLCSGDEQKLIPIPTPPSS------------------SSSSLSSSSSCSRVEDLPTGSS 295
           E+LCS +++K    P P  S                  SSSS SSSSS SR E+L TGSS
Sbjct: 241 EKLCSAEDEKANTSPPPLESNLVVDNYWEPELKSEVETSSSSSSSSSSPSRSEELSTGSS 300

[Close]

BLAST of Sed0020020 vs. ExPASy TrEMBL
Match: A0A5A7T4I4 (Ethylene-responsive transcription factor ERF060 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002710 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 9.9e-104
Identity = 222/352 (63.07%), Postives = 244/352 (69.32%), Query Frame = 0


Query: 1   MSAALGFYKGISAPVYSSDPLNEELMKALEPFLKSAIPTSSSSS---------------- 60
           M+AA+  Y G S PVY SDP +EELMKAL+PF+KSAI TSSSSS                
Sbjct: 1   MAAAIDVYSGTSTPVYYSDPFSEELMKALQPFMKSAISTSSSSSSSSYSPSPPPHPSVSS 60

Query: 61  ----------------FSQGFSEIEQMGIEQSGPIGLNNLTSSQILQIQAQIQLP----- 120
                           FSQGFS IEQMG EQSGPIGLNN T SQILQIQAQIQLP     
Sbjct: 61  QPRLIPDFCSPSSTRLFSQGFSGIEQMGFEQSGPIGLNNPTPSQILQIQAQIQLPSPTMS 120

Query: 121 -ISSFESQISSQFNNFLAPKSIPMKQIGSLPKPSKLYRGVRQRHWGKWVAEIRLPKNRTR 180
             SS  S   SQ++NFL PKS PMK IGS PKP+KLYRGVRQRHWGKWVAEIRLPKNRTR
Sbjct: 121 SFSSSSSSFQSQYHNFLTPKSFPMKHIGSPPKPTKLYRGVRQRHWGKWVAEIRLPKNRTR 180

Query: 181 LWLGTFDTAENAALAYDKAAYKLRGEFARLNFPHLIQQFGDFNPLHASVDAKLEAICESL 240
           LWLGTFDTAE AALAYD+AAYKLRG+FARLNFPHL  QFGDF PLH SVDAKL++IC+SL
Sbjct: 181 LWLGTFDTAEEAALAYDQAAYKLRGDFARLNFPHLKHQFGDFKPLHPSVDAKLQSICQSL 240

Query: 241 KQGKTEETEQLCSGDEQKLIPIPTPPSSSS----------------SSLSSSSSCSRVED 297
           KQGKTE    +CS +++K   IP P  S+S                S  SSSSS SR ED
Sbjct: 241 KQGKTE----VCSVEDEKPTTIPLPSESNSAVNNFWEPELKSEVETSFSSSSSSPSRSED 300

[Close]

BLAST of Sed0020020 vs. ExPASy TrEMBL
Match: A0A1S3B297 (ethylene-responsive transcription factor ERF060 OS=Cucumis melo OX=3656 GN=LOC103484983 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 9.9e-104
Identity = 222/352 (63.07%), Postives = 244/352 (69.32%), Query Frame = 0


Query: 1   MSAALGFYKGISAPVYSSDPLNEELMKALEPFLKSAIPTSSSSS---------------- 60
           M+AA+  Y G S PVY SDP +EELMKAL+PF+KSAI TSSSSS                
Sbjct: 1   MAAAIDVYSGTSTPVYYSDPFSEELMKALQPFMKSAISTSSSSSSSSYSPSPPPHPSVSS 60

Query: 61  ----------------FSQGFSEIEQMGIEQSGPIGLNNLTSSQILQIQAQIQLP----- 120
                           FSQGFS IEQMG EQSGPIGLNN T SQILQIQAQIQLP     
Sbjct: 61  QPRLIPDFCSPSSTRLFSQGFSGIEQMGFEQSGPIGLNNPTPSQILQIQAQIQLPSPTMS 120

Query: 121 -ISSFESQISSQFNNFLAPKSIPMKQIGSLPKPSKLYRGVRQRHWGKWVAEIRLPKNRTR 180
             SS  S   SQ++NFL PKS PMK IGS PKP+KLYRGVRQRHWGKWVAEIRLPKNRTR
Sbjct: 121 SFSSSSSSFQSQYHNFLTPKSFPMKHIGSPPKPTKLYRGVRQRHWGKWVAEIRLPKNRTR 180

Query: 181 LWLGTFDTAENAALAYDKAAYKLRGEFARLNFPHLIQQFGDFNPLHASVDAKLEAICESL 240
           LWLGTFDTAE AALAYD+AAYKLRG+FARLNFPHL  QFGDF PLH SVDAKL++IC+SL
Sbjct: 181 LWLGTFDTAEEAALAYDQAAYKLRGDFARLNFPHLKHQFGDFKPLHPSVDAKLQSICQSL 240

Query: 241 KQGKTEETEQLCSGDEQKLIPIPTPPSSSS----------------SSLSSSSSCSRVED 297
           KQGKTE    +CS +++K   IP P  S+S                S  SSSSS SR ED
Sbjct: 241 KQGKTE----VCSVEDEKPTTIPLPSESNSAVNNFWEPELKSEVETSFSSSSSSPSRSED 300

[Close]

BLAST of Sed0020020 vs. ExPASy TrEMBL
Match: A0A6J1HK00 (ethylene-responsive transcription factor ERF060-like OS=Cucurbita moschata OX=3662 GN=LOC111463614 PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 2.2e-103
Identity = 216/335 (64.48%), Postives = 247/335 (73.73%), Query Frame = 0


Query: 1   MSAALGFYKGISAPVYSSDPLNEELMKALEPFLKSAIPTSSSSS---------------- 60
           M+AAL F  GISAPVYSSDP  EELMKAL+PF+KSA+ TSSSSS                
Sbjct: 1   MAAALDFCTGISAPVYSSDPFCEELMKALQPFMKSAVSTSSSSSVSYQPNVNPDFCSPSS 60

Query: 61  ---FSQGFSEIEQMGIEQSGPIGLNNLTSSQILQIQAQIQLPIS---------SFESQIS 120
              F Q  S IEQMG+EQSGPIGLNN T SQ+LQIQAQIQLP           SF+S++S
Sbjct: 61  IRLFPQACSGIEQMGLEQSGPIGLNNPTPSQVLQIQAQIQLPSQTMSSFPSSFSFQSRVS 120

Query: 121 SQFNNFLAPKSIPMKQIGSLPKPSKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAE 180
           SQ+++ LAPKSIPMK  GS  KP+++YRG+RQRHWGKWVAEIRLPKNRTRLWLGTFDTAE
Sbjct: 121 SQYHSVLAPKSIPMKHTGSPTKPTRVYRGIRQRHWGKWVAEIRLPKNRTRLWLGTFDTAE 180

Query: 181 NAALAYDKAAYKLRGEFARLNFPHLIQQFGDFNPLHASVDAKLEAICESLKQGKTE---- 240
            AALAYDKAAYKLRG+ ARLNFPHL  QFGDF PLH+SVDAKL+AIC+SLKQG+TE    
Sbjct: 181 EAALAYDKAAYKLRGDLARLNFPHLKHQFGDFEPLHSSVDAKLQAICQSLKQGETEKPPS 240

Query: 241 -----ETEQLCSGDEQKLIPIPTPPSSSSSSLSSSSSCSRVEDLPTGSSPECSISFLDFS 299
                E+  + +  ++  + I    SSSSSS SS SS S  ED  TGSSPE SISFLDFS
Sbjct: 241 SPPPSESNSVVNNFKEAELKIEAETSSSSSSSSSWSSPSLCEDFSTGSSPESSISFLDFS 300

[Close]

BLAST of Sed0020020 vs. TAIR 10
Match: AT4G39780.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 222.6 bits (566), Expect = 4.8e-58
Identity = 149/287 (51.92%), Postives = 182/287 (63.41%), Query Frame = 0


Query: 17  SSDPLNEELMKALEPFLKSAIPTSSSSSFSQGFSEIEQMGIEQSGPIGLNNLTSSQILQI 76
           ++DP  EELMKAL+P+      T+++ S S  +S     G  Q+  +GLN LT  QI QI
Sbjct: 10  NTDPFQEELMKALQPY------TTNTDSSSPTYSN-TVFGFNQTTSLGLNQLTPYQIHQI 69

Query: 77  QAQIQLPISSFESQISSQFNNFLAPKSIPMKQIGSLPKPSKLYRGVRQRHWGKWVAEIRL 136
           Q Q+        +Q  +  +  LAPK +PMK + +     KLYRGVRQRHWGKWVAEIRL
Sbjct: 70  QNQL--------NQRRNIISPNLAPKPVPMKNMTA----QKLYRGVRQRHWGKWVAEIRL 129

Query: 137 PKNRTRLWLGTFDTAENAALAYDKAAYKLRGEFARLNFPHLIQQFG------DFNPLHAS 196
           PKNRTRLWLGTFDTAE AA+AYD AAYKLRGEFARLNFP    + G       FNPLH+S
Sbjct: 130 PKNRTRLWLGTFDTAEEAAMAYDLAAYKLRGEFARLNFPQFRHEDGYYGGGSCFNPLHSS 189

Query: 197 VDAKLEAICESLKQGKTEETEQLCSGDEQKLIPIPTP-PSSSSSSLSSSSSCSRVEDLPT 256
           VDAKL+ IC+SL+  KTE+ +  CS  E +L P  T    S    L S  +    E    
Sbjct: 190 VDAKLQEICQSLR--KTEDIDLPCS--ETELFPPKTEYQESEYGFLRSDENSFSDESHVE 249

Query: 257 GSSPECSI-SFLDFSDSQWDENESFFCSEKFSSVEIDWAALNQLAES 296
            SSPE  I +FLDFSDS +DE  SF   EKF SVEIDW A+++L+ES
Sbjct: 250 SSSPESGITTFLDFSDSGFDEIGSFGL-EKFPSVEIDWDAISKLSES 272

[Close]

BLAST of Sed0020020 vs. TAIR 10
Match: AT1G78080.1 (related to AP2 4 )

HSP 1 Score: 218.8 bits (556), Expect = 6.9e-57
Identity = 144/321 (44.86%), Postives = 184/321 (57.32%), Query Frame = 0


Query: 24  ELMKALEPFLKSAIPTSSSSS-------------------------------FSQGFSEI 83
           ELM AL PF+KS   + SSSS                               FS G S++
Sbjct: 20  ELMDALVPFIKSVSDSPSSSSAASASAFLHPSAFSLPPLPGYYPDSTFLTQPFSYG-SDL 79

Query: 84  EQMGIEQSGPIGLNNLTSSQILQIQAQIQLPISSFESQISSQFNNFLAPKSIPMKQIG-- 143
           +Q G      IGLNNL+SSQI QIQ+QI  P+       ++ F+N L+PK + MKQ G  
Sbjct: 80  QQTG----SLIGLNNLSSSQIHQIQSQIHHPLPPTHHNNNNSFSNLLSPKPLLMKQSGVA 139

Query: 144 --------SLP-KPSKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAENAALAYDKA 203
                    +P KP+KLYRGVRQRHWGKWVAEIRLP+NRTRLWLGTFDTAE AALAYDKA
Sbjct: 140 GSCFAYGSGVPSKPTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDKA 199

Query: 204 AYKLRGEFARLNFP-------HLIQQFGDFNPLHASVDAKLEAICESLKQGKTEETEQLC 263
           AYKLRG+FARLNFP       H+   FG++ PLH+SVDAKLEAIC+S+ + + ++     
Sbjct: 200 AYKLRGDFARLNFPNLRHNGSHIGGDFGEYKPLHSSVDAKLEAICKSMAETQKQDKSTKS 259

Query: 264 SGDEQKLIPIP-----TPPSSSSSSLSSSSSCSRVEDLPTGSSPECSISFLDFSD-SQWD 290
           S   +K +  P          +S S+  S   +  E+   GSSP   ++F D  +  QW+
Sbjct: 260 SKKREKKVSSPDLSEKVKAEENSVSIGGSPPVTEFEESTAGSSPLSDLTFADPEEPPQWN 319

[Close]

BLAST of Sed0020020 vs. TAIR 10
Match: AT5G65130.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 189.1 bits (479), Expect = 5.8e-48
Identity = 128/289 (44.29%), Postives = 165/289 (57.09%), Query Frame = 0


Query: 23  EELMKALEPFLKSAIPTSSSSSFSQGFSEIEQMGI----------EQSGPIGLNNLTSSQ 82
           +E M+ALEPF+K  + +SSS+S S     +    I           Q+GPIGLN LT +Q
Sbjct: 10  DEFMEALEPFMK--VTSSSSTSNSSNPKPLTPNFIPNNDQVLPVSNQTGPIGLNQLTPTQ 69

Query: 83  ILQIQAQIQLPISSFESQISSQFNNFLAPKSIPMKQIGSLPKPSKLYRGVRQRHWGKWVA 142
           ILQIQ ++ L  +    +  S   + L  K   MK+I    KP KLYRGVRQR WGKWVA
Sbjct: 70  ILQIQTELHLRQNQSRRRAGS---HLLTAKPTSMKKIDVATKPVKLYRGVRQRQWGKWVA 129

Query: 143 EIRLPKNRTRLWLGTFDTAENAALAYDKAAYKLRGEFARLNFPHLIQQFGDFNPLHASVD 202
           EIRLPKNRTRLWLGTF+TA+ AALAYD+AA+K+RG+ ARLNFP +++Q      L  S++
Sbjct: 130 EIRLPKNRTRLWLGTFETAQEAALAYDQAAHKIRGDNARLNFPDIVRQGHYKQILSPSIN 189

Query: 203 AKLEAICESL--------KQGKTEETEQLCSGDEQKLIPIPTPPSSSSSSLSSSSSCSRV 262
           AK+E+IC S         KQ KTEE     S  E++                    C   
Sbjct: 190 AKIESICNSSDLPLPQIEKQNKTEEVLSGFSKPEKE------------PEFGEIYGCGY- 249

Query: 263 EDLPTGSSPECSISFLDFSDSQWDENESFFCS-EKFSSVEIDWAALNQL 293
               +GSSPE  I+ LDFS     E+ESF     K+ S+EIDW A+ +L
Sbjct: 250 ----SGSSPESDITLLDFSSDCVKEDESFLMGLHKYPSLEIDWDAIEKL 276

[Close]

BLAST of Sed0020020 vs. TAIR 10
Match: AT1G22190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 188.0 bits (476), Expect = 1.3e-47
Identity = 133/300 (44.33%), Postives = 173/300 (57.67%), Query Frame = 0


Query: 1   MSAALGFYKGISAPVYSSDPLNEELMKALEPFLKSAIPTSSSSSFSQGFSEIEQMGIEQS 60
           M+ ++ FY   +     SDP   ELM+AL PF+KS  P++ SS+F+  FS          
Sbjct: 1   MTTSMDFYS--NKTFQQSDPFGGELMEALLPFIKS--PSNDSSAFA--FS---------- 60

Query: 61  GPIGLNNLTSSQILQIQAQIQLPISSFESQISSQFNNFLAPKSIPMKQIG-SLPKPSKLY 120
                              +  PI S+ S + S F++ L+PK + MKQ G S  KP+KLY
Sbjct: 61  -------------------LPAPI-SYGSDLHS-FSHHLSPKPVSMKQTGTSAAKPTKLY 120

Query: 121 RGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAENAALAYDKAAYKLRGEFARLNFPHLIQ 180
           RGVRQRHWGKWVAEIRLP+NRTRLWLGTFDTAE AALAYDKAAYKLRG+FARLNFP L +
Sbjct: 121 RGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPDL-R 180

Query: 181 QFGDFNPLHASVDAKLEAICESL---KQGKTEETEQLCSGDEQKLIPIPTPPSSSSSSLS 240
              ++ PL +SVDAKLEAIC++L    Q +   T++  S      + +  P    S   S
Sbjct: 181 HNDEYQPLQSSVDAKLEAICQNLAETTQKQVRSTKKSSSRKRSSTVAVKLPEEDYS---S 240

Query: 241 SSSSCSRVEDLPTG--SSPECSISFLDFSDS---QWDENESFFCSEKFSSVEIDWAALNQ 292
           + SS    E   +G  SSP   ++F D  +     W+EN      EK+ S EIDW ++ Q
Sbjct: 241 AGSSPLLTESYGSGGSSSPLSELTFGDTEEEIQPPWNEN----ALEKYPSYEIDWDSILQ 255

[Close]

BLAST of Sed0020020 vs. TAIR 10
Match: AT2G22200.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 187.6 bits (475), Expect = 1.7e-47
Identity = 127/263 (48.29%), Postives = 163/263 (61.98%), Query Frame = 0


Query: 56  GIEQSGPIGLNNLTSSQILQIQAQIQLPISSFESQISSQFNNFLAPKSIPMKQI-GSLPK 115
           G+ +S P+GLN LT  QI QIQ Q    ++   S IS+     L+P  I MK +  S  K
Sbjct: 16  GVNKSMPLGLNQLTPYQIHQIQNQ----LNHRRSTISN-----LSPNRIRMKNLTPSTSK 75

Query: 116 PSKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAENAALAYDKAAYKLRGEFARLNF 175
              LYRGVRQRHWGKWVAEIRLPKNRTRLWLGTF+TAE AALAYD+AA++LRG+ A+LNF
Sbjct: 76  TKNLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFETAEKAALAYDQAAFQLRGDIAKLNF 135

Query: 176 PHLIQQFGDFNPLHASVDAKLEAICESLKQGKTEETEQLCSGDEQK-------------- 235
           P+LI +  D NPL +SVD KL+AIC+SL+     +TE++CS  +Q               
Sbjct: 136 PNLIHE--DMNPLPSSVDTKLQAICKSLR-----KTEEICSVSDQTKEYSVYSVSDKTEL 195

Query: 236 LIP-----IPTPPSSSSSSLSSSSSCSRVEDLPTGSSPECSIS---FLDFSDSQWDENES 295
            +P     +P      ++ LS+ S  S    L   S  E S S   FLDFSD++++E  S
Sbjct: 196 FLPKAELFLPKREHLETNELSNESPRSDETSLLDESQAEYSSSDKTFLDFSDTEFEEIGS 255

The following BLAST results are available for this feature:

BLAST of Sed0020020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022133397.1	7.3e-109	68.88	ethylene-responsive transcription factor ERF060 [Momordica charantia]	[more]
XP_038882480.1	4.0e-107	65.22	ethylene-responsive transcription factor ERF056 [Benincasa hispida]	[more]
XP_023544546.1	5.8e-106	65.80	ethylene-responsive transcription factor ERF060-like [Cucurbita pepo subsp. pepo...	[more]
XP_022949926.1	2.9e-105	65.79	ethylene-responsive transcription factor ERF060-like [Cucurbita moschata]	[more]
KAG7034188.1	1.4e-104	63.92	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]

BLAST of Sed0020020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65665	6.7e-57	51.92	Ethylene-responsive transcription factor ERF060 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8H1E4	9.7e-56	44.86	Ethylene-responsive transcription factor RAP2-4 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9FJQ2	8.2e-47	44.29	Ethylene-responsive transcription factor ERF057 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LM15	1.8e-46	44.33	Ethylene-responsive transcription factor RAP2-13 OS=Arabidopsis thaliana OX=3702...	[more]
Q9SIE4	2.4e-46	48.29	Ethylene-responsive transcription factor ERF056 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Sed0020020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BWJ7	3.5e-109	68.88	ethylene-responsive transcription factor ERF060 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1GDE5	1.4e-105	65.79	ethylene-responsive transcription factor ERF060-like OS=Cucurbita moschata OX=36...	[more]
A0A5A7T4I4	9.9e-104	63.07	Ethylene-responsive transcription factor ERF060 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3B297	9.9e-104	63.07	ethylene-responsive transcription factor ERF060 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1HK00	2.2e-103	64.48	ethylene-responsive transcription factor ERF060-like OS=Cucurbita moschata OX=36...	[more]

BLAST of Sed0020020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39780.1	4.8e-58	51.92	Integrase-type DNA-binding superfamily protein	[more]
AT1G78080.1	6.9e-57	44.86	related to AP2 4	[more]
AT5G65130.1	5.8e-48	44.29	Integrase-type DNA-binding superfamily protein	[more]
AT1G22190.1	1.3e-47	44.33	Integrase-type DNA-binding superfamily protein	[more]
AT2G22200.1	1.7e-47	48.29	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 141..157 score: 68.56 coord: 119..130 score: 72.73
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 118..181 e-value: 8.3E-36 score: 135.0
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 119..168 e-value: 2.8E-14 score: 53.1
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 118..175 score: 23.037476
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 117..177 e-value: 6.64587E-34 score: 117.373
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 118..176 e-value: 5.2E-27 score: 95.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 209..251
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 224..251
None	No IPR available	PANTHER	PTHR31657	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061	coord: 1..44 coord: 47..291
None	No IPR available	PANTHER	PTHR31657:SF45	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF060-LIKE	coord: 47..291
None	No IPR available	PANTHER	PTHR31657:SF45	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF060-LIKE	coord: 1..44
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 118..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0020020.1	Sed0020020.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity