Sed0019985 (gene) Chayote v1

Overview


Name	Sed0019985
Type	gene
Organism	Sechium edule (Chayote v1)
Description	oxidative stress 3
Location	LG11: 352065 .. 352969 (+)
RNA-Seq Expression	Sed0019985
Synteny	Sed0019985

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGAAACATTTTTTTGGACAATACCCTTATATTGCTTACACTTTTAAACCATTTCCCATTCCTTTCTTCTTCAACTTCTTTCAATTTTCTTTCTTCTTTTTTGGGCATGAACATGGGAGGCAAAGAAAAGATTGAAGCGTTTGAAGCTATAGAGTTGAGGGAACTTAGTTGGGTAATCATGGAAACAAGAGGAAATAAAGTTTATGAAACTTCTACTTTGACCATTGATTCTTCTCCAGAAAATTCGATCAACTCAAGTGAATCTTCATCGTCGGAATTTGTAGAAGATGCATCATCTACTTCAACCTCGAACCTTTCATTATCGTCGTTTTCACCATCATCGTCGAGTGGACCTCTCTATGAACTTTCAGAGCTCATGGCCAATCTCCCAATCAAGTAAGAAGATATGAAAAACCCTAGAGAAATAGTTAGCAAAAACTTTTTTTTTTATCAAACAATAACCCCTTTTGATTTTCTTTGGATTTTTTAGGAGAGGGCTATCAAAATTCTACAATGGAAAATCACAATCCTTTACATCTCTAGCAAGTGCAAAGAGCTTGGAAGATCTAGCAAAGAGAGTGAATAGTATTTCTCAAAGAAAAAAGATGAAGACTTGTAAGAGCTATGGAGGTGGCTTAGATGCTCAAAGATCTTACTCTCCAAAGGCTTTGATTGCCAAAAAGGCTTCCAAGAGAAATAGTAGGGTGGGTTTATTTGATAGCCATTGATGTTTTCAACCAATCATTGGAGGGATGCTAATTTAACTCTTTAATCTCTTTTTTTTTTCCTCTTGTTTATTGTGTATGATTTAGAGATAAAGAGTTGAGGTTGGTTGCTTTTTGAGAAAATGTTTTTTGTAATGCTACAATGACTAAATTATATTTATTTCAAAAGTTTTATTGGA

mRNA sequence

AAAGAAACATTTTTTTGGACAATACCCTTATATTGCTTACACTTTTAAACCATTTCCCATTCCTTTCTTCTTCAACTTCTTTCAATTTTCTTTCTTCTTTTTTGGGCATGAACATGGGAGGCAAAGAAAAGATTGAAGCGTTTGAAGCTATAGAGTTGAGGGAACTTAGTTGGGTAATCATGGAAACAAGAGGAAATAAAGTTTATGAAACTTCTACTTTGACCATTGATTCTTCTCCAGAAAATTCGATCAACTCAAGTGAATCTTCATCGTCGGAATTTGTAGAAGATGCATCATCTACTTCAACCTCGAACCTTTCATTATCGTCGTTTTCACCATCATCGTCGAGTGGACCTCTCTATGAACTTTCAGAGCTCATGGCCAATCTCCCAATCAAGAGAGGGCTATCAAAATTCTACAATGGAAAATCACAATCCTTTACATCTCTAGCAAGTGCAAAGAGCTTGGAAGATCTAGCAAAGAGAGTGAATAGTATTTCTCAAAGAAAAAAGATGAAGACTTGTAAGAGCTATGGAGGTGGCTTAGATGCTCAAAGATCTTACTCTCCAAAGGCTTTGATTGCCAAAAAGGCTTCCAAGAGAAATAGTAGGGTGGGTTTATTTGATAGCCATTGATGTTTTCAACCAATCATTGGAGGGATGCTAATTTAACTCTTTAATCTCTTTTTTTTTTCCTCTTGTTTATTGTGTATGATTTAGAGATAAAGAGTTGAGGTTGGTTGCTTTTTGAGAAAATGTTTTTTGTAATGCTACAATGACTAAATTATATTTATTTCAAAAGTTTTATTGGA

Coding sequence (CDS)

ATGAACATGGGAGGCAAAGAAAAGATTGAAGCGTTTGAAGCTATAGAGTTGAGGGAACTTAGTTGGGTAATCATGGAAACAAGAGGAAATAAAGTTTATGAAACTTCTACTTTGACCATTGATTCTTCTCCAGAAAATTCGATCAACTCAAGTGAATCTTCATCGTCGGAATTTGTAGAAGATGCATCATCTACTTCAACCTCGAACCTTTCATTATCGTCGTTTTCACCATCATCGTCGAGTGGACCTCTCTATGAACTTTCAGAGCTCATGGCCAATCTCCCAATCAAGAGAGGGCTATCAAAATTCTACAATGGAAAATCACAATCCTTTACATCTCTAGCAAGTGCAAAGAGCTTGGAAGATCTAGCAAAGAGAGTGAATAGTATTTCTCAAAGAAAAAAGATGAAGACTTGTAAGAGCTATGGAGGTGGCTTAGATGCTCAAAGATCTTACTCTCCAAAGGCTTTGATTGCCAAAAAGGCTTCCAAGAGAAATAGTAGGGTGGGTTTATTTGATAGCCATTGA

Protein sequence

MNMGGKEKIEAFEAIELRELSWVIMETRGNKVYETSTLTIDSSPENSINSSESSSSEFVEDASSTSTSNLSLSSFSPSSSSGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLASAKSLEDLAKRVNSISQRKKMKTCKSYGGGLDAQRSYSPKALIAKKASKRNSRVGLFDSH

Homology

[Close]

BLAST of Sed0019985 vs. NCBI nr
Match: XP_022154740.1 (uncharacterized protein LOC111021921 [Momordica charantia])

HSP 1 Score: 235.7 bits (600), Expect = 3.0e-58
Identity = 144/183 (78.69%), Postives = 157/183 (85.79%), Query Frame = 0


Query: 1   MNMGGKEKIEAFEAIELRELSWVIMETRGNKVYETSTLTIDSSPENSINSSESSSSEFVE 60
           M++GGKEK+EAFEA+ELRELSWVIM++  ++V E S  T+DSS ENSI+S ES SSE  E
Sbjct: 1   MDIGGKEKLEAFEAMELRELSWVIMKSGEDEVCEASISTMDSSSENSISSIESFSSELAE 60

Query: 61  DASSTSTSNLSLSSFSP-SSSSGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLASAKS 120
           DASS+STSN SLSSFSP SSSSGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLASAKS
Sbjct: 61  DASSSSTSNPSLSSFSPLSSSSGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLASAKS 120

Query: 121 LEDLAKRVNS---ISQRKKMKTCKSYGGGLDAQRSYSPKALIAKKAS----KRNSRVGLF 176
           LEDLAKRVN+   I QRKKMK CKSYGGGLDAQRSYSPKA IAKK S    KRN+R  LF
Sbjct: 121 LEDLAKRVNNNIIIPQRKKMKCCKSYGGGLDAQRSYSPKASIAKKPSKAVCKRNNR--LF 180

[Close]

BLAST of Sed0019985 vs. NCBI nr
Match: XP_022965955.1 (uncharacterized protein LOC111465679 [Cucurbita maxima])

HSP 1 Score: 216.5 bits (550), Expect = 1.9e-52
Identity = 136/181 (75.14%), Postives = 150/181 (82.87%), Query Frame = 0


Query: 1   MNMGGKEKIEAF---EAIELRELSWVIMETRGNKVYETSTLTIDSSPENSINSSESSSSE 60
           M+MGGK+ IEAF   EA+EL+ELS V++ETR + V E S      S ENSI+S ES SSE
Sbjct: 22  MDMGGKQMIEAFQPYEALELQELSLVMVETREDDVCEASI-----STENSISSFESFSSE 81

Query: 61  FVEDASSTSTSNLSLSSFSPSSSSGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLASA 120
            +EDASSTSTS+LSLSS S S SSGPLYELSELMANLPIKRGLSKFYNGKSQSFTS+ASA
Sbjct: 82  LLEDASSTSTSSLSLSSLSSSQSSGPLYELSELMANLPIKRGLSKFYNGKSQSFTSVASA 141

Query: 121 KSLEDLAKRVNS---ISQRKKMKTCKSYGGGLDAQRSYSPKALIAKKASKRNSRVGLFDS 176
           KSLEDLAK+VN+    SQRKKMK+CKSYGGGLDAQRSYSPK LIAKKASKR SR  LF S
Sbjct: 142 KSLEDLAKKVNNNNITSQRKKMKSCKSYGGGLDAQRSYSPKPLIAKKASKRRSR--LFVS 195

[Close]

BLAST of Sed0019985 vs. NCBI nr
Match: XP_038890684.1 (uncharacterized protein LOC120080185 [Benincasa hispida])

HSP 1 Score: 215.7 bits (548), Expect = 3.2e-52
Identity = 134/184 (72.83%), Postives = 150/184 (81.52%), Query Frame = 0


Query: 3   MGGKEKIEAFEAIELRELSWVIMETRGNKVYETSTLTIDSSPENSINSSESSSSEFVEDA 62
           MGGKEK+EAFEA+EL EL+WVIMETR ++V+E ST TI SS ENSINS ES SSE +EDA
Sbjct: 1   MGGKEKMEAFEAMELTELNWVIMETRESEVFEASTSTIGSSSENSINSIESLSSELLEDA 60

Query: 63  SSTS-TSNLSLSSFSP--SSSSGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLASAKS 122
           SS+S  SNLS  S SP  SSS GPLYELSELMANLPIKRGLSKFYNGKSQSFTSLAS KS
Sbjct: 61  SSSSFASNLSSLSLSPSLSSSDGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLASVKS 120

Query: 123 LEDLAKRV-NSISQRKKMKTCKSYGGGLDAQRS-YSPKALIAKKASK--------RNSRV 174
           LEDLAKRV N+ISQRKKMK+CKSYGGGLDAQ+  YSPK LI+K+ SK        + + +
Sbjct: 121 LEDLAKRVNNNISQRKKMKSCKSYGGGLDAQKPYYSPKPLISKRVSKGSLLSPISKRNNI 180

[Close]

BLAST of Sed0019985 vs. NCBI nr
Match: KAG6586456.1 (hypothetical protein SDJN03_19189, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 215.7 bits (548), Expect = 3.2e-52
Identity = 136/182 (74.73%), Postives = 150/182 (82.42%), Query Frame = 0


Query: 1   MNMGGKEKIEAFE---AIELRELSWVIMETRGNKVYETSTLTIDSSPENSINSSESSSSE 60
           M+MGGK+ IEAFE   A+EL+ELS V++ETR + V E S      S ENSI+S ES SSE
Sbjct: 1   MDMGGKDMIEAFEAYKAMELQELSLVMVETREDDVCEASI-----STENSISSFESFSSE 60

Query: 61  FVEDASSTSTSNLSLSSFSPSSSSGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLASA 120
            +EDASSTSTS+LSLSS S S SSGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLASA
Sbjct: 61  LLEDASSTSTSSLSLSSLSSSQSSGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLASA 120

Query: 121 KSLEDLAKRVNS----ISQRKKMKTCKSYGGGLDAQRSYSPKALIAKKASKRNSRVGLFD 176
           KSLEDLAK+VN+     SQ+KKMK+CKSYGGGLDAQRSYSPK LIAKKASKR SR  LF 
Sbjct: 121 KSLEDLAKKVNNNNNITSQKKKMKSCKSYGGGLDAQRSYSPKPLIAKKASKRRSR--LFV 175

[Close]

BLAST of Sed0019985 vs. NCBI nr
Match: XP_022937494.1 (uncharacterized protein LOC111443888 isoform X1 [Cucurbita moschata] >XP_022937495.1 uncharacterized protein LOC111443888 isoform X1 [Cucurbita moschata])

HSP 1 Score: 214.5 bits (545), Expect = 7.1e-52
Identity = 136/182 (74.73%), Postives = 148/182 (81.32%), Query Frame = 0


Query: 1   MNMGGKEKIEAFE---AIELRELSWVIMETRGNKVYETSTLTIDSSPENSINSSESSSSE 60
           M+MGGK+ IEAFE   A+EL+ELS V++ETR + V E S      S ENSI+S ES SSE
Sbjct: 1   MDMGGKDMIEAFEAYKAMELQELSLVMVETREDDVCEASI-----STENSISSFESFSSE 60

Query: 61  FVEDASSTSTSNLSLSSFSPSSSSGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLASA 120
            +EDASSTSTSNLSLSS S S SSGPLYELSELM NLPIKRGLSKFYNGKSQSFTSLASA
Sbjct: 61  LLEDASSTSTSNLSLSSLSSSQSSGPLYELSELMDNLPIKRGLSKFYNGKSQSFTSLASA 120

Query: 121 KSLEDLAKRVNS----ISQRKKMKTCKSYGGGLDAQRSYSPKALIAKKASKRNSRVGLFD 176
           KSLEDLAK+VN+     SQ+KKMK CKSYGGGLDAQRSYSPK LIAKKASKR SR  LF 
Sbjct: 121 KSLEDLAKKVNNNNNITSQKKKMKCCKSYGGGLDAQRSYSPKPLIAKKASKRRSR--LFV 175

[Close]

BLAST of Sed0019985 vs. ExPASy TrEMBL
Match: A0A6J1DKH4 (uncharacterized protein LOC111021921 OS=Momordica charantia OX=3673 GN=LOC111021921 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.4e-58
Identity = 144/183 (78.69%), Postives = 157/183 (85.79%), Query Frame = 0


Query: 1   MNMGGKEKIEAFEAIELRELSWVIMETRGNKVYETSTLTIDSSPENSINSSESSSSEFVE 60
           M++GGKEK+EAFEA+ELRELSWVIM++  ++V E S  T+DSS ENSI+S ES SSE  E
Sbjct: 1   MDIGGKEKLEAFEAMELRELSWVIMKSGEDEVCEASISTMDSSSENSISSIESFSSELAE 60

Query: 61  DASSTSTSNLSLSSFSP-SSSSGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLASAKS 120
           DASS+STSN SLSSFSP SSSSGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLASAKS
Sbjct: 61  DASSSSTSNPSLSSFSPLSSSSGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLASAKS 120

Query: 121 LEDLAKRVNS---ISQRKKMKTCKSYGGGLDAQRSYSPKALIAKKAS----KRNSRVGLF 176
           LEDLAKRVN+   I QRKKMK CKSYGGGLDAQRSYSPKA IAKK S    KRN+R  LF
Sbjct: 121 LEDLAKRVNNNIIIPQRKKMKCCKSYGGGLDAQRSYSPKASIAKKPSKAVCKRNNR--LF 180

[Close]

BLAST of Sed0019985 vs. ExPASy TrEMBL
Match: A0A6J1HQ75 (uncharacterized protein LOC111465679 OS=Cucurbita maxima OX=3661 GN=LOC111465679 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 9.0e-53
Identity = 136/181 (75.14%), Postives = 150/181 (82.87%), Query Frame = 0


Query: 1   MNMGGKEKIEAF---EAIELRELSWVIMETRGNKVYETSTLTIDSSPENSINSSESSSSE 60
           M+MGGK+ IEAF   EA+EL+ELS V++ETR + V E S      S ENSI+S ES SSE
Sbjct: 22  MDMGGKQMIEAFQPYEALELQELSLVMVETREDDVCEASI-----STENSISSFESFSSE 81

Query: 61  FVEDASSTSTSNLSLSSFSPSSSSGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLASA 120
            +EDASSTSTS+LSLSS S S SSGPLYELSELMANLPIKRGLSKFYNGKSQSFTS+ASA
Sbjct: 82  LLEDASSTSTSSLSLSSLSSSQSSGPLYELSELMANLPIKRGLSKFYNGKSQSFTSVASA 141

Query: 121 KSLEDLAKRVNS---ISQRKKMKTCKSYGGGLDAQRSYSPKALIAKKASKRNSRVGLFDS 176
           KSLEDLAK+VN+    SQRKKMK+CKSYGGGLDAQRSYSPK LIAKKASKR SR  LF S
Sbjct: 142 KSLEDLAKKVNNNNITSQRKKMKSCKSYGGGLDAQRSYSPKPLIAKKASKRRSR--LFVS 195

[Close]

BLAST of Sed0019985 vs. ExPASy TrEMBL
Match: A0A6J1FBB9 (uncharacterized protein LOC111443888 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443888 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 3.4e-52
Identity = 136/182 (74.73%), Postives = 148/182 (81.32%), Query Frame = 0


Query: 1   MNMGGKEKIEAFE---AIELRELSWVIMETRGNKVYETSTLTIDSSPENSINSSESSSSE 60
           M+MGGK+ IEAFE   A+EL+ELS V++ETR + V E S      S ENSI+S ES SSE
Sbjct: 1   MDMGGKDMIEAFEAYKAMELQELSLVMVETREDDVCEASI-----STENSISSFESFSSE 60

Query: 61  FVEDASSTSTSNLSLSSFSPSSSSGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLASA 120
            +EDASSTSTSNLSLSS S S SSGPLYELSELM NLPIKRGLSKFYNGKSQSFTSLASA
Sbjct: 61  LLEDASSTSTSNLSLSSLSSSQSSGPLYELSELMDNLPIKRGLSKFYNGKSQSFTSLASA 120

Query: 121 KSLEDLAKRVNS----ISQRKKMKTCKSYGGGLDAQRSYSPKALIAKKASKRNSRVGLFD 176
           KSLEDLAK+VN+     SQ+KKMK CKSYGGGLDAQRSYSPK LIAKKASKR SR  LF 
Sbjct: 121 KSLEDLAKKVNNNNNITSQKKKMKCCKSYGGGLDAQRSYSPKPLIAKKASKRRSR--LFV 175

[Close]

BLAST of Sed0019985 vs. ExPASy TrEMBL
Match: A0A6J1FAH9 (uncharacterized protein LOC111443888 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111443888 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 3.2e-50
Identity = 133/178 (74.72%), Postives = 143/178 (80.34%), Query Frame = 0


Query: 1   MNMGGKEKIEAFE---AIELRELSWVIMETRGNKVYETSTLTIDSSPENSINSSESSSSE 60
           M+MGGK+ IEAFE   A+EL+ELS V++ETR + V E S      S ENSI+S ES SSE
Sbjct: 1   MDMGGKDMIEAFEAYKAMELQELSLVMVETREDDVCEASI-----STENSISSFESFSSE 60

Query: 61  FVEDASSTSTSNLSLSSFSPSSSSGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLASA 120
            +EDASSTSTSNLSLSS S S SSGPLYELSELM NLPIKRGLSKFYNGKSQSFTSLASA
Sbjct: 61  LLEDASSTSTSNLSLSSLSSSQSSGPLYELSELMDNLPIKRGLSKFYNGKSQSFTSLASA 120

Query: 121 KSLEDLAKRVNSISQRKKMKTCKSYGGGLDAQRSYSPKALIAKKASKRNSRVGLFDSH 176
           KSLEDLAK+V      KKMK CKSYGGGLDAQRSYSPK LIAKKASKR SR  LF SH
Sbjct: 121 KSLEDLAKKV------KKMKCCKSYGGGLDAQRSYSPKPLIAKKASKRRSR--LFVSH 165

[Close]

BLAST of Sed0019985 vs. ExPASy TrEMBL
Match: A0A1S3C929 (uncharacterized protein LOC103498213 OS=Cucumis melo OX=3656 GN=LOC103498213 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 3.8e-43
Identity = 125/181 (69.06%), Postives = 140/181 (77.35%), Query Frame = 0


Query: 3   MGGKEK-IEAFEAIELRELSWVIMETRGNKVYET-STLTIDSSPENSINSSESSSSEFVE 62
           M GKE+ IE FEA+ELREL+WVIME+R ++V E  ST TIDSS   S+NS ESS+SE +E
Sbjct: 1   MEGKEQIIEDFEAMELRELNWVIMESREDEVLEAFSTSTIDSS---SMNSMESSASELLE 60

Query: 63  DASSTS-----TSNLSLSSFSPSSSSGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLA 122
           DASS+S     +S+LSLS    SS  GPLYELSELMANLPIKRGLSKFYNGKSQSFTSLA
Sbjct: 61  DASSSSLTSNFSSSLSLSPSLSSSDDGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLA 120

Query: 123 SAKSLEDLAKRVN------SISQRKKMKTCKSYGGGLDAQRS---YSPKALIAKKASKRN 168
           S KSLEDLAKRVN        SQRKKMK CKSYGG LDAQ+S   +SPK LIAKK SK +
Sbjct: 121 SVKSLEDLAKRVNYNNNNYYNSQRKKMKCCKSYGGSLDAQKSSNYHSPKPLIAKKVSKPS 178

[Close]

BLAST of Sed0019985 vs. TAIR 10
Match: AT5G56550.1 (oxidative stress 3 )

HSP 1 Score: 88.2 bits (217), Expect = 7.1e-18
Identity = 70/157 (44.59%), Postives = 96/157 (61.15%), Query Frame = 0


Query: 25  METRGNKVYETSTLTIDSSPENSINSSESSSSEFVEDASSTSTSNLSLSSF--------- 84
           ++  GN +YE  T       E+ +    ++ S+  +++SS S S+   S F         
Sbjct: 9   LKQMGNMIYEDPTRI--QEEEDIVQEVSTTFSDEEDNSSSCSLSSSMCSDFTEDDDDDDV 68

Query: 85  SPSSSSGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLASAKSLEDLAKR-VNSISQRK 144
           S SSS+GPL +LS+LM++LPIKRGLSKFY GKSQSFTSL + KSLEDL KR   S +   
Sbjct: 69  SSSSSNGPLEDLSDLMSHLPIKRGLSKFYEGKSQSFTSLGNVKSLEDLMKRGFKSRNYGA 128

Query: 145 KMKTCKSYGGGLDA--QRSYSPKALIAKKASKRNSRV 170
           K K+ +S GG LD   +R +SPKA I+KK ++  S V
Sbjct: 129 KRKSSRSTGGILDQSYKRVFSPKATISKKPNRTPSSV 163

[Close]

BLAST of Sed0019985 vs. TAIR 10
Match: AT4G26288.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: oxidative stress 3 (TAIR:AT5G56550.1); Has 289 Blast hits to 232 proteins in 41 species: Archae - 0; Bacteria - 12; Metazoa - 36; Fungi - 21; Plants - 151; Viruses - 2; Other Eukaryotes - 67 (source: NCBI BLink). )

HSP 1 Score: 66.2 bits (160), Expect = 2.9e-11
Identity = 57/131 (43.51%), Postives = 77/131 (58.78%), Query Frame = 0


Query: 42  SSPENSINSSESSSSEFVEDASSTSTSNLSLSSFSPSSSSGPLYELSELMANLPI----K 101
           S+  +S +S    SS+  EDASS+S+S       S SSS+GP  +LS+L++ LPI    K
Sbjct: 25  SAKVSSSSSISMCSSDLTEDASSSSSS-------SSSSSNGPFDDLSDLISQLPIIQVKK 84

Query: 102 RGLSKFYNGKSQSFTSLASAKSLEDLAKRVNSISQRKKMKTCKSYGGGLDAQRSYSPKAL 161
            GLSK+Y GKSQSFTSLA+  SL+DL KR      R K    + Y         Y PKA 
Sbjct: 85  GGLSKYYKGKSQSFTSLANVTSLQDLVKR----GSRTKSCCKRDY--------FYGPKAT 136

Query: 162 IAKKASKRNSR 169
           I+ KA++ +S+
Sbjct: 145 ISMKATRTSSK 136

[Close]

BLAST of Sed0019985 vs. TAIR 10
Match: AT5G21940.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 44.3 bits (103), Expect = 1.2e-04
Identity = 44/138 (31.88%), Postives = 71/138 (51.45%), Query Frame = 0


Query: 42  SSPENSINSSESSSSEFVEDASSTSTSNLSLSSFSPSSSSGPLYELSELMANLPIKRGLS 101
           SSP +S +SS   +S+  E +S     +   +    S   GPL  +  L   LP+++G+S
Sbjct: 34  SSPSSSASSSIGRNSDDGEKSSEDGGDDAGENEVE-SPYKGPLEMMESLEQVLPVRKGIS 93

Query: 102 KFYNGKSQSFT--------SLASAKSLEDLAKRVNSISQRKKMKTCKSYGGGLDAQRSYS 161
           K+Y+GKS+SFT        +L S+ S++DLAK  N  S+R++   C      +      +
Sbjct: 94  KYYSGKSKSFTNLTAEAASALTSSSSMKDLAKPENPYSRRRRNLLCHQ----IWENNKTT 153

Query: 162 PKALIAKKASKRNSRVGL 172
           P+  I+KK    +SR  L
Sbjct: 154 PRGGISKKHVMSSSRSAL 166

[Close]

BLAST of Sed0019985 vs. TAIR 10
Match: AT4G31510.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24550.1); Has 205 Blast hits to 205 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 3; Plants - 187; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 42.4 bits (98), Expect = 4.5e-04
Identity = 35/93 (37.63%), Postives = 54/93 (58.06%), Query Frame = 0


Query: 44  PENSINSSESSSSEFVEDASSTSTSNLSLSSFSPSSSSGPLYELSELMANLPIKRGLSKF 103
           PE+S +  E+S +E  ED + +S+    L+SFS           S L  +LPIKRGLS  
Sbjct: 41  PESSSSVGETSENEEDEDDAVSSSQGRWLNSFS-----------SSLEDSLPIKRGLSNH 100

Query: 104 YNGKSQSFTSLASAKSLEDLAKRVNSISQRKKM 137
           Y GKS+SF +L  A +  DL K  + +++R+++
Sbjct: 101 YIGKSKSFGNLMEASNTNDLVKVESPLNKRRRL 122

The following BLAST results are available for this feature:

BLAST of Sed0019985 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154740.1	3.0e-58	78.69	uncharacterized protein LOC111021921 [Momordica charantia]	[more]
XP_022965955.1	1.9e-52	75.14	uncharacterized protein LOC111465679 [Cucurbita maxima]	[more]
XP_038890684.1	3.2e-52	72.83	uncharacterized protein LOC120080185 [Benincasa hispida]	[more]
KAG6586456.1	3.2e-52	74.73	hypothetical protein SDJN03_19189, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022937494.1	7.1e-52	74.73	uncharacterized protein LOC111443888 isoform X1 [Cucurbita moschata] >XP_0229374...	[more]

BLAST of Sed0019985 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0019985 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DKH4	1.4e-58	78.69	uncharacterized protein LOC111021921 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]
A0A6J1HQ75	9.0e-53	75.14	uncharacterized protein LOC111465679 OS=Cucurbita maxima OX=3661 GN=LOC111465679...	[more]
A0A6J1FBB9	3.4e-52	74.73	uncharacterized protein LOC111443888 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1FAH9	3.2e-50	74.72	uncharacterized protein LOC111443888 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A1S3C929	3.8e-43	69.06	uncharacterized protein LOC103498213 OS=Cucumis melo OX=3656 GN=LOC103498213 PE=...	[more]

BLAST of Sed0019985 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G56550.1	7.1e-18	44.59	oxidative stress 3	[more]
AT4G26288.1	2.9e-11	43.51	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT5G21940.1	1.2e-04	31.88	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G31510.1	4.5e-04	37.63	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..82
None	No IPR available	PANTHER	PTHR33172	OS08G0516900 PROTEIN	coord: 20..167
None	No IPR available	PANTHER	PTHR33172:SF45	EMB\|CAB83157.1	coord: 20..167

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0019985.1	Sed0019985.1	mRNA