Sed0019969 (gene) Chayote v1

Overview


Name	Sed0019969
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Ribosomal L28 family
Location	LG04: 8166502 .. 8174436 (+)
RNA-Seq Expression	Sed0019969
Synteny	Sed0019969

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAAAATATTTTTTTTTGAAGTAATTACAATAAGCTCGTTTGAATGTAGTTTTTTTAAGAGTAATTGAAAAACTAGTTGAAAACTTTCATCCAAACACCCTTGAAAAGTTTTTTTTTTTTTAATTTTTTTATTTTTATCAAAATGAGGAGCAAAAAGAGTAATTTGAAAACTAAAATAGGGTTTGTGAAAAAAAGGCAATAACTGTAGGCGTCCGTGGGTTTTAGTTTCTTCCCTCCGTTCGTGATCCCGGCGACTGCATCCACCGAGCGACGACGGCGTTGCAATCAGAGCTCGGCGGCGGAGCTTCGACACTAGGCGCTCTCGGTAAAGCATCTCTCTGCCTTCTCGTTCGTTCCTTCTTTCCCTCTTTCTCTTTGTCTCCGTTTTCCGGCCACCGTCATGGGCGTCGACGGCGTACGGGGTTCGGGGACGAGTCTTAGCGGCGGCGCGACGGTGGAGACAACTCCGGAACATTCAGATCTGGCGGCGTTCGATCCATTCTCCGGCAAGCTCGGGTTGGAGCTGCGTGTGGGGGACGAGTCCAGCGGCCGTGGGTTGCGTTCCGTTCGGAATTTCGATTGTTCTGTTCTACCGCTGTTCCTATGTTTAGGAGTATTTTGAATCACAGCTGATTTTGCCAACTGCAGGATATTGGTGATAATGGCGTTTAGAGGAAGGGAAATCATGAAGAAGGTATTGAAGAAAGTTGGAGAGAACAATTTGGCGCCTGGAGTGAAGGATTCATTGAAGAAATGTATACCTGACAGCAAAGTGGTGATGAATAGGGCTAAGCGCGGGATTTTTGCAGGTCGTCATATCCAGTACGGAAACCGTATCAGTGAAGACGGTGGCAACAAGTATGAACCTGTTTTCTTTCCTTTATTTTTCTCTAATTATTTCTGAATTTGGATGCATTTTATGGATTTTCCAAATTCTTCGTTGTTAGGTATTCATCCATTTTAGTTGCTTGGCTTGATTTATTGTTTTCTTAGAATTGCAAGTGTTGGCGCCATTAATGAATTTACTGCACTCTGAATTGATAGAAACTAGGAAATTTGGCTGATGGTTCTTCTTGTTACAATTTTGAAAAGTATGCCTTAGCGTTTGTGCTGTAGATTTTTTCTCTCTTTTCAAATATGACAAGATTCTTACTTCTAAGTTTTACTGGAGGTGCTGTTTTGGTTTGTGAGTAACACATGTATATAGATAAAGCAATGTTCATAGATTACTGGAATTGGGTATTCATTAATGTAAACTTTGAAAATAAACAATAATCTCAGCTCTGTACCTGACTTCAAATTGTTCTTTCTTGTTAAGCCACACCTTGAGCGGGAGTGTTTTAGGGTAGGGTAATGATTTTTTTTTTTAATAAGACAATTTTATTGGTAATGGTAAGAAAGAAAAAGTCTTCGAATACCTATAGATTATTACAAATAAGACTTTCGATGGGAGATGGAAAAAGTTGAAATAAAAAAAATCCAAATGGTAAACATTTTTGCACCTCATGAAAACATTAGAAAATATAATATCTATCAGATGATCAAAATTTTAAACGTTGAAATTTTATCGATTCCTTTCCAACCAAAGGTTCCATATGAAAGCACGAACCATTGCAACCTTGATTATCTTCTTTGTGCCTTTAAAAGGGTGATCCACCAATACAGTAGAGTAGTAAGGGAAAAAAAATGTTATGTGAGAGAGACATTGACCAATCAAACGCTTCCATCATAGAACTCCAAAACTGCCAAGCAAAGAGGCAATGCACTAACAAATGATATGTAGTTTTTGAATTTGATCTCAACACAAGTACACATACTGCGCCATGTAGGAGATAGTGCCATATAAGAATTTGTGTTTGTAGTCGATCATTTGTGATGAAAGATCCCAAACTAAGTTTCGAAAGAATTTTTTTTATCTTATTTGGATAGGGGCCCTTCTGTGTCACTGAATATAATATTTAAGCTTGCATCAACAAACCCCAACAAACTTTTGTAAGTGTTGCATTATGCCTTGAACGCACTAATGCCCCACGATTAGTAGTCAGGGGTCTCGCTGCCCGGTCAATGAGTGAGGAGTCTTGAGGGGCAACGCCCGTGTAAAAACGTAAATTAGCATTATGTAATTAGGTTTTAATTAGAGCGCTATAAGCTCGAATTAAAACTCTAGCCGTTTTTATGACATTTACCTCTGTAATTCGCCTCTCTGAATAAAACTCATTCTCCCTCTCTGCTCGTGGACTAGCCAACACAACGTTGATGAACCACGTAAATCTGATAGAATCTACCACGATATATTATTAAACTACGATAATCTCTTGAGAGGATCTCTCAAAGAGCCAGAGTACAATGACGACAATTCAATAGATGATTAACAAAGACCTCTCCTCCCCTATTTATAACCCTAAACCCTAATTAAATAAAAGACTAATAATAGGCCCAAGCCCAATACAATTAAAATAGCAATTAACTAATAAATAATAAATATTAATACTAATATTCCTAAAACTCCAAGGTCTGGATCGTATCAATACTTTCCCCCCCAAGAGCCATCTTGTCCTCAAGGTGTTCCATCTCCGATGCCATCTTCTGCAGCTCCGTCTTCTGGCGAAAAGTCTGTCACATCAACATCCTGGTAATCGTGCGCATCTCGAACAACCCACACATCCAAATTCTGGAGCTCTTTCTTCTGACAACGATGTCCCGGGACAAATCGTTCATCACAATGGAAGCATAATCCTTTGTCCTTCCTTGCTCGAATTTCGGCTTCAGTGAGTTTTTTACAAGACGCCGGGTGAATGGTTGTAGTCCTGTGAGAAAGAGTCTCTGTGCTTCCAGATCCCGATGCAATCGTTCCTGCTTTAGCCTTGACCGTTGCAGAAGTACTTCCCTCATTTTGGGCAGCCTGAAAAGCAAAATCATCCTCAATCACCTGTGCCATAAACTTCTTATCATGAATCCCAACAGTCGCGAGCTTTCCTCATTTCACTTCTAATTTCGCCTTCAACCCGCTTTCCCATTTCCTTCCAATGCACTTGCACTAATATCACGCATTCCCTTTGCATACTTCTCAAAACGATCGTCGATACTCTTTAACTGTTCCAACTTTGTTGTAAGCTCATCAAATTGGCGTACTTGTTGTCATTAATCGTTGGTTGGAAGCGGTGCAACAAAGAGTTCTCGAATTCTTCCCAAGAACTGATCGGGGATCGATCTTCCTCATACTGCAACCATTCCAAAGCCTCACCCTCCATACACAGAGCTGCACCATCGACCCGTTCCTGTCCTTCCAGCCGGTTTACTCAAAAGTATCGTTCTACTCGACACAACCATCCGTCCGGATCCTCATCGGTAAGCCCTTTGAATACCGGCATCTCGAGTTTTCGTAATCTCCTGTCTAACACCGACCCTTCTCTACCTCCTGTTCTCGGTCCTCCTCGTTCATAACGATCCTCCCACTCCCTCCAGTCCTCTCGGTCTCCTTCTCGAAATTGATTATCCCATCCTCGGTCGTTCCAACCGTCATGCGCTATCGGCCTATCATAATCGATGCGCACCCTCCTCTCCTCCGTCAACTCGTTGCCTCGACCATCGACCTTCGGTTCCCCCTTTCGGTCGAATCCCGGTCCCCACAAATCGAAACGACTCTCTCTCCGGTCCAACCCGGCTGACCCAGACCGACCCGGCCAGACCAGCCCGCCCCGACCCGGTCCCCCTGGGCCGCTACCGTGCCACACGCCGCCCGACACCGCGCTTGACCCAAGCCCACCGCCCCGGCCTCGCTCGGCCCCGACTCCGCACACCCCCACGCCCGCGCCCCAGTCCGAAGCCTCAGTGCCGCCTACGCCCGAGCCCCAACCCGAGCCCGGTCCCCCCTGGCCGCCGCCGTGCCACACGCCCCGGCCTTCACCGCCCCAGCCTGCGCCCCACCCGCGCTTGCGCTCGCCCACACTCGTCGCACCAAGCCCGCTCACCGCACCAGGCCCGCTCCCGTTGCCCCCCGCGCCCGCGCCGCCTCGGTTCTCCCCGCACGCCCCCTAGACCTCGCGACGCCCCACCTCGGTTCTCCCCGCCTCGGCCCGACACTCCCCGAGCTTGGGCCTCAACCGCCACGTTCCGCGCCACCGCCCGACGCGCCTACCCCCGGGTCCCTACCTGGCGCGCCAACCCCCTCACCAACCCCGACAACTGCGCCACCCGCCCAGAACCCACCGGCCGCTCCCCTCGGACAGACGCCACCGCCCACCCTTCTCGCGTCGCCTACGCCCGTCTCCAGCCCGACGCCACCCCCCGTAGGCCCGACCTCCGCGCCCGACCCCGGCTCGCTCGCTCGCCCGTTGCCCCAGCTACCGACGCCCCACCCGTGGCCACCACACCTTCTCCCTCGCCCGCAGCCTCGATCGCTAGCCCCTTCCCCTTGTCACCTTGCTTCGATTCCATTAGCATCTGCATGGTTCGGTTGATCATCTCGAACTTCGCATCTTGCTGTTCGAATTTCAGATCCATCTGTTTCCCTAAACGTTCTTCAAACGATTCCATCCTTGTTTCGACATCCTTCAGCCTTCTTGCCAATTCCGCCGATCCTTCTTCGCATTCTTGCATCCTCGTTTCCATCTTAGTACTCACCATTCCTGGATCGGTAAATGGCTCTGATACCAAAATGATAGAATCTACGACGATATATTATTAAACTACGATAATCTCTTGAGAGGATCTCTCAAAGAGCCAGAGTACAATGACGACAATTCAATAGATGATTAACAAAGACCTCTCCTCCCCTATTTATAACCCTAAACCCTAATTAAATAAAAGACTAATAATAGGCCAAAACCCAATTCAATTAAAATAGCAATTAACTAATAAATAATAAATATTAATACTAATATTCCTAAAACTCCAAGGTCCGGATCGTATCAAAATCCTTGTGTGATTTCTGCTTCTCTTCCTCTTTTACGATTTTTTTATCTTCTTTATTGATTGTTGATTTCCGTTTCATAACAGTAAGGGATTTGACAGTGAAGATTTGAGAAGGATCTATTGGCCAAACCCAACAATCAGGAATATTCGACAATTTTATTTGGGATTATAAATTAGGAAGCGTGACCCATTCATTAGTTTTTGTATCTGTCAAATTACGTTTAAGTTATAGATCCCAAGCATAGTTTGTTCATCCACATTTCTGCCATTATAAGATTTGATTTTCTTTTGATTGTTATATGGAAATGAACCTTTGGTTGGTGTTTGGGGTGTGTTGGCTCTATGGTAGGGTGGGTGGTAGGGTTAAAGACCAACCTACATCTTCATTTGGGTTGCAAGGTGGCTTTTCAGGTGTGGGGTCAGAGGACTTGCATGGAAATCATTAGAGTTTGTTTTTTCTTTTTCCCTCTCCTCATTTTCATGAGGAGGGGAATTCCTTGTGAAAGGTTGGGTTGTGCACTATTTTGTGGAGTCACTGGGTTGAGAGAAATAATAGATTTTTATAGGGGCGAGAGATTTTTAGGGATGGGCATGATTACCTGTGTTTCAGAAAAAAAGAGGGGGTGAGAGAAATAATAGATTTTTAGATGGGTGGAGAGAGATTTCTTCTTCTTCTTTTTATTTTAGGAGATTTCTTCTTTCTTTAGGAGAAAATTGAGCATAACCCTAGTTTTAGAACTCAAAATTTCAACTATTAATGCCAGTCCATTCCTTCAATCACGATATTTAATTCAACCTTTGATATGGCTCACCATAACCACATCCTTAGAACCCCTATGAGGATCTCCAAGTTCCTTATCGAAGTTTCTAGCTTCCAGCCTCTCTAGTGTTTATCTTTGATGAAGAAGCTCGCCGCCAATGCTGATCTTGGGGCAAGAATCTCACCTTCTACACCGGTTGTGGTTACTGTTGAGATCTCAATTGTCCCACATTGGAAAAATGGGGAGTCCAACATCAATATAAAAGAGATATGAGTTACTCCCCTCATTACCAATTGGTTTTGAGGTGGAACCCCATATTCTCTAATAGTTACCTCATTAGTGTATTCAACAATGCGATTACGACCTATCTCCGTGATACCATGAAGCTTTGAATCAATTGGATCTTAAACTCTTCTGGTCATTCAGGGCATCTCGAGGGGAATCAGCTCGGCATGATTGGGTTGTTATGTATTGGTTTGGACAACGGTACTGAGGCTTTTAGGGATATAGACATGAGTGGAACTATGTAGCAATGAGACTTGGTACCAATGCCTTTATTGTGCGGCAAGAGGGATGATATGATGAGGGGAAGGAATGTTATCTTACAAATTTTATCAATATACTTTGTGCTAGGAAGTCATAGTTTTGTACGGGAACCTATGATGAGAATACTGAGGATGCAATTTCTATACATGGTTCACTCGTGCTTCTTCATCAGCTACATTGAGCGATGCAATTCGTTGAGTTTGCTAATAACGAATAATCTCTAGTATGGACATGATCCATTATTTCCATAACAGCTGATAATTTGGATGTAATTAATGAAATTATTTGAAGTTTGATCGACCTCCAAAAAGAGAGGTGGAGACTAAAGAGATCTTCATGTGATATCTGAGCACTCGTTACATGTCATGATTATTTTTTACTTAGTTACTAGACTTTTTTGTAATTACCTTCTAGGAGTTCTTTCATTTTTTTTTCCCACTGAAAGCTCAAGTTCATTCTAAAAGAAAGCCTACATCTGGCTAAGTGAGTTGTCGAACCTGGGTTTAATTGGAGAACCAACTAAACTAGCAATAAGACCTCATAATTTTCTGAACCCTAACTTCTTAAACCTGCCCCCAAACGCAAAAATTTTGTTCCAAAGGGGGGTTACATTCTTATAAGAGAAAGTGAACTTAAAGATGTGTTTCCTCTTCCTGCAAAATTTGTTGCCTTTTGCTGTATATTTGGAGTTTTTAATACACATGTCTAAGGATGTGCCTATCTTTCTCTGAGAATTTGGAGTTTTGAGGGCAAAATATATATAATCACACTTCCTTTCCTTTGTATTGGCTTTAGCTTATACAATTAGACTAGGGTTCGTAACCTTTTTCCATTTTTTGCACAGACCTTCATATTGAAGTTTGTCTTTTATCATTATTCATGCGAAAATCGATGTTGTTGTCATCATCATCTTTGTTTTTGGTTTTGGGGTATTGATCCCTTATATGCCCGTGCTTATAGGTCAAGAAGGCATTGGAAACCAAATATCCAAGAGAAACGACTTTTCAGTTATATTCTAGACCGCCACATTCGAGTTAAAGTCAGCACCCATGCCCTTCGATGCATCGACAAGGTCGGTGGGATCGATGAGTATCTGCTGAAAACTCCATACCACAAAATGGACACTGAAGTGGGGCTGTTTTGGAAGGCAAAGATCGAGAAGCTGTACGAAGAACTCGGGCAGATGGAAGTTGTTTTCTTCTCACCAGAGGATGAAGCTAAATTTGAACAGGGCTTTAAAGATCTGGAATTATCCAAGAAGGAAGCACGAAAGGAGTCGAGAAGAAAGATGTATGGTAGTTCAAGCAAGCAGGATCAGATCGAGGGACGAGCAGACAGCAGCGAGAAAGCTGCAGATGCTGATGGTTCTCAACAAATGGTTGTCAATGCCTAGGGGACTTTACATCTTTGGAGGGTCAAGCCTGGATTTGTTCCCTACCCCTTCCAAGATTTGTTTTGCATTTTCACTGAAATCTTTTTGTAGTTTTATTTGTATTTTGTTTAATGAGTACAGTTCGAAATGAGAATTGTTTTGGAAATTGAGATGTGAAATCTTAGAACTATTTATTTGTTCAATAAATTAGGCTAACTATATGATTTGCCAGCCATTTTTGTTGATCTTTGAAATTTTGGGCTCGGTTAGATATGTATTTTCTTCTTGTACAAGTTGGAGGAAAGAGAATTACAAATACCAATTCCAGAGATTGAATCCGTG

mRNA sequence

TGAAAATATTTTTTTTTGAAGTAATTACAATAAGCTCGTTTGAATGTAGTTTTTTTAAGAGTAATTGAAAAACTAGTTGAAAACTTTCATCCAAACACCCTTGAAAAGTTTTTTTTTTTTTAATTTTTTTATTTTTATCAAAATGAGGAGCAAAAAGAGTAATTTGAAAACTAAAATAGGGTTTGTGAAAAAAAGGCAATAACTGTAGGCGTCCGTGGGTTTTAGTTTCTTCCCTCCGTTCGTGATCCCGGCGACTGCATCCACCGAGCGACGACGGCGTTGCAATCAGAGCTCGGCGGCGGAGCTTCGACACTAGGCGCTCTCGGATATTGGTGATAATGGCGTTTAGAGGAAGGGAAATCATGAAGAAGGTATTGAAGAAAGTTGGAGAGAACAATTTGGCGCCTGGAGTGAAGGATTCATTGAAGAAATGTATACCTGACAGCAAAGTGGTGATGAATAGGGCTAAGCGCGGGATTTTTGCAGGTCGTCATATCCAGTACGGAAACCGTATCAGTGAAGACGGTGGCAACAAGTCAAGAAGGCATTGGAAACCAAATATCCAAGAGAAACGACTTTTCAGTTATATTCTAGACCGCCACATTCGAGTTAAAGTCAGCACCCATGCCCTTCGATGCATCGACAAGGTCGGTGGGATCGATGAGTATCTGCTGAAAACTCCATACCACAAAATGGACACTGAAGTGGGGCTGTTTTGGAAGGCAAAGATCGAGAAGCTGTACGAAGAACTCGGGCAGATGGAAGTTGTTTTCTTCTCACCAGAGGATGAAGCTAAATTTGAACAGGGCTTTAAAGATCTGGAATTATCCAAGAAGGAAGCACGAAAGGAGTCGAGAAGAAAGATGTATGGTAGTTCAAGCAAGCAGGATCAGATCGAGGGACGAGCAGACAGCAGCGAGAAAGCTGCAGATGCTGATGGTTCTCAACAAATGGTTGTCAATGCCTAGGGGACTTTACATCTTTGGAGGGTCAAGCCTGGATTTGTTCCCTACCCCTTCCAAGATTTGTTTTGCATTTTCACTGAAATCTTTTTGTAGTTTTATTTGTATTTTGTTTAATGAGTACAGTTCGAAATGAGAATTGTTTTGGAAATTGAGATGTGAAATCTTAGAACTATTTATTTGTTCAATAAATTAGGCTAACTATATGATTTGCCAGCCATTTTTGTTGATCTTTGAAATTTTGGGCTCGGTTAGATATGTATTTTCTTCTTGTACAAGTTGGAGGAAAGAGAATTACAAATACCAATTCCAGAGATTGAATCCGTG

Coding sequence (CDS)

ATGGCGTTTAGAGGAAGGGAAATCATGAAGAAGGTATTGAAGAAAGTTGGAGAGAACAATTTGGCGCCTGGAGTGAAGGATTCATTGAAGAAATGTATACCTGACAGCAAAGTGGTGATGAATAGGGCTAAGCGCGGGATTTTTGCAGGTCGTCATATCCAGTACGGAAACCGTATCAGTGAAGACGGTGGCAACAAGTCAAGAAGGCATTGGAAACCAAATATCCAAGAGAAACGACTTTTCAGTTATATTCTAGACCGCCACATTCGAGTTAAAGTCAGCACCCATGCCCTTCGATGCATCGACAAGGTCGGTGGGATCGATGAGTATCTGCTGAAAACTCCATACCACAAAATGGACACTGAAGTGGGGCTGTTTTGGAAGGCAAAGATCGAGAAGCTGTACGAAGAACTCGGGCAGATGGAAGTTGTTTTCTTCTCACCAGAGGATGAAGCTAAATTTGAACAGGGCTTTAAAGATCTGGAATTATCCAAGAAGGAAGCACGAAAGGAGTCGAGAAGAAAGATGTATGGTAGTTCAAGCAAGCAGGATCAGATCGAGGGACGAGCAGACAGCAGCGAGAAAGCTGCAGATGCTGATGGTTCTCAACAAATGGTTGTCAATGCCTAG

Protein sequence

MAFRGREIMKKVLKKVGENNLAPGVKDSLKKCIPDSKVVMNRAKRGIFAGRHIQYGNRISEDGGNKSRRHWKPNIQEKRLFSYILDRHIRVKVSTHALRCIDKVGGIDEYLLKTPYHKMDTEVGLFWKAKIEKLYEELGQMEVVFFSPEDEAKFEQGFKDLELSKKEARKESRRKMYGSSSKQDQIEGRADSSEKAADADGSQQMVVNA

Homology

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BLAST of Sed0019969 vs. NCBI nr
Match: XP_022923524.1 (uncharacterized protein LOC111431195 [Cucurbita moschata])

HSP 1 Score: 352.8 bits (904), Expect = 2.0e-93
Identity = 180/220 (81.82%), Postives = 199/220 (90.45%), Query Frame = 0


Query: 1   MAFRGREIMKKVLKKVGENNLAPGVKDSLKKCIPDSKVVMNRAKRGIFAGRHIQYGNRIS 60
           MAFRG+E+MKK+LKKVGENNLAPGVKDSLKKCIPDSK+VMNRAKRGIFAGRHIQ+GNRIS
Sbjct: 1   MAFRGKEMMKKILKKVGENNLAPGVKDSLKKCIPDSKIVMNRAKRGIFAGRHIQFGNRIS 60

Query: 61  EDGGNKSRRHWKPNIQEKRLFSYILDRHIRVKVSTHALRCIDKVGGIDEYLLKTPYHKMD 120
           EDGGNKSRR+WKPN+QEKRLFSYILDRHIRVKV+THALRCIDK GGIDEYLLKTPYHKMD
Sbjct: 61  EDGGNKSRRNWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMD 120

Query: 121 TEVGLFWKAKIEKLYEELGQMEVVFFSPEDEAKFEQGFKDLELSKKEARKESRRKMYGSS 180
           TE+GLFWKAKIEKLYEELGQMEVVFFSPEDEAKFEQGF+DL+LS++ ARKE+RR+MYGSS
Sbjct: 121 TEIGLFWKAKIEKLYEELGQMEVVFFSPEDEAKFEQGFRDLKLSERAARKEARRRMYGSS 180

Query: 181 SKQDQIE----GRADSSEKAADA-------DGSQQMVVNA 210
           ++ DQIE     RA SSE+ A +       DG QQ V NA
Sbjct: 181 TQHDQIEEGQADRAGSSEEVAGSEGGSHGDDGPQQCVANA 220

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BLAST of Sed0019969 vs. NCBI nr
Match: XP_023553194.1 (uncharacterized protein LOC111810681 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 350.5 bits (898), Expect = 9.9e-93
Identity = 179/220 (81.36%), Postives = 199/220 (90.45%), Query Frame = 0


Query: 1   MAFRGREIMKKVLKKVGENNLAPGVKDSLKKCIPDSKVVMNRAKRGIFAGRHIQYGNRIS 60
           MAFRG+E+MKK+LKKVGENNLAPGVKDSLKKCIPDSK+VMNRAKRGIFAGRHIQ+GNRIS
Sbjct: 1   MAFRGKEMMKKILKKVGENNLAPGVKDSLKKCIPDSKIVMNRAKRGIFAGRHIQFGNRIS 60

Query: 61  EDGGNKSRRHWKPNIQEKRLFSYILDRHIRVKVSTHALRCIDKVGGIDEYLLKTPYHKMD 120
           EDGGNKSRR+WKPN+Q KRLFSYILDRHIRVKV+THALRCIDK GGIDEYLLKTPYHKMD
Sbjct: 61  EDGGNKSRRNWKPNVQGKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMD 120

Query: 121 TEVGLFWKAKIEKLYEELGQMEVVFFSPEDEAKFEQGFKDLELSKKEARKESRRKMYGSS 180
           TE+GLFWKAKIEKLYEELGQMEVVFFSPEDEAKFEQGF+DL+LS++ ARKE+RR+MYGSS
Sbjct: 121 TEIGLFWKAKIEKLYEELGQMEVVFFSPEDEAKFEQGFRDLKLSERAARKEARRRMYGSS 180

Query: 181 SKQDQIE----GRADSSEKAADA-------DGSQQMVVNA 210
           ++ DQIE     RA+SSE+ A +       DG QQ V NA
Sbjct: 181 TQHDQIEEGQADRAESSEEVAGSEGGSHGGDGPQQWVSNA 220

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BLAST of Sed0019969 vs. NCBI nr
Match: KAG6577758.1 (hypothetical protein SDJN03_25332, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 350.5 bits (898), Expect = 9.9e-93
Identity = 179/220 (81.36%), Postives = 198/220 (90.00%), Query Frame = 0


Query: 1   MAFRGREIMKKVLKKVGENNLAPGVKDSLKKCIPDSKVVMNRAKRGIFAGRHIQYGNRIS 60
           MAFRG+E+MKK+LKKVGENNLAPGVKDSLKKCIPDSK+VMNRAKRGIFAGRHIQ+GNRIS
Sbjct: 1   MAFRGKEMMKKILKKVGENNLAPGVKDSLKKCIPDSKIVMNRAKRGIFAGRHIQFGNRIS 60

Query: 61  EDGGNKSRRHWKPNIQEKRLFSYILDRHIRVKVSTHALRCIDKVGGIDEYLLKTPYHKMD 120
           EDGGNKSRR+WKPN+QEKRLFSYILDRHIRVKV+THALRCIDK GGIDEYLLKTPYHKMD
Sbjct: 61  EDGGNKSRRNWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMD 120

Query: 121 TEVGLFWKAKIEKLYEELGQMEVVFFSPEDEAKFEQGFKDLELSKKEARKESRRKMYGSS 180
           TE+GLFWKAKIEKLYEELGQMEVVFFSPEDEAKFEQGF+DL+LS++ ARKE+RR+MYGS 
Sbjct: 121 TEIGLFWKAKIEKLYEELGQMEVVFFSPEDEAKFEQGFRDLKLSERAARKEARRRMYGSL 180

Query: 181 SKQDQIE----GRADSSEKAADA-------DGSQQMVVNA 210
           ++ DQIE     RA SSE+ A +       DG QQ V NA
Sbjct: 181 TQHDQIEEGQADRAGSSEEVAGSEGGSHGDDGPQQCVANA 220

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BLAST of Sed0019969 vs. NCBI nr
Match: XP_022965371.1 (uncharacterized protein LOC111465250 [Cucurbita maxima])

HSP 1 Score: 349.4 bits (895), Expect = 2.2e-92
Identity = 175/205 (85.37%), Postives = 196/205 (95.61%), Query Frame = 0


Query: 1   MAFRGREIMKKVLKKVGENNLAPGVKDSLKKCIPDSKVVMNRAKRGIFAGRHIQYGNRIS 60
           MAFRG+E+MKK+LKKVGENNLAPGVKDSLKKCIPDSKVVMNRAKRGIFAGRHIQ+GNR+S
Sbjct: 1   MAFRGKEMMKKILKKVGENNLAPGVKDSLKKCIPDSKVVMNRAKRGIFAGRHIQFGNRVS 60

Query: 61  EDGGNKSRRHWKPNIQEKRLFSYILDRHIRVKVSTHALRCIDKVGGIDEYLLKTPYHKMD 120
           EDGGNKSRR WKPN+QEKRLFSYILDRHIRVKV+THALRCIDK GGIDEYLLKTPYHKMD
Sbjct: 61  EDGGNKSRRSWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMD 120

Query: 121 TEVGLFWKAKIEKLYEELGQMEVVFFSPEDEAKFEQGFKDLELSKKEARKESRRKMYGSS 180
           TE+GLFWKAKIEKLYEELGQMEVVFFSPEDEAKFEQGF+DL+LS++ ARKE+RR+MYGSS
Sbjct: 121 TEIGLFWKAKIEKLYEELGQMEVVFFSPEDEAKFEQGFRDLKLSERAARKETRRRMYGSS 180

Query: 181 SKQDQI-EGRAD---SSEKAADADG 202
           +++DQI EG+AD   SSE+ A ++G
Sbjct: 181 TQRDQIEEGQADRVGSSEEVAGSEG 205

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BLAST of Sed0019969 vs. NCBI nr
Match: XP_022145425.1 (uncharacterized protein LOC111014872 [Momordica charantia])

HSP 1 Score: 344.0 bits (881), Expect = 9.3e-91
Identity = 179/221 (81.00%), Postives = 198/221 (89.59%), Query Frame = 0


Query: 1   MAFRGREIMKKVLKKVGENNLAPGVKDSLKKCIPDSKVVMNRAKRGIFAGRHIQYGNRIS 60
           MAFRG+E+MKKVLKKVGE NLAPGVK+SLKKCIPDSKVVMNRAKRGIFAGRHIQ+GNR+S
Sbjct: 1   MAFRGKEMMKKVLKKVGEINLAPGVKESLKKCIPDSKVVMNRAKRGIFAGRHIQFGNRVS 60

Query: 61  EDGGNKSRRHWKPNIQEKRLFSYILDRHIRVKVSTHALRCIDKVGGIDEYLLKTPYHKMD 120
           EDGGNKSRR WKPN+QEKRLFSYILDRHIRVKV+THALRCIDKVGGIDEYLLKTPYHKMD
Sbjct: 61  EDGGNKSRRTWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKVGGIDEYLLKTPYHKMD 120

Query: 121 TEVGLFWKAKIEKLYEELGQMEVVFFSPEDEAKFEQGFKDLELSKKEARKESRRKMYGSS 180
           TE+GLFWKAKI KLYEELGQMEVVFFSPEDEAKFEQGF++L+L+++ ARKE+RR+ YGSS
Sbjct: 121 TEIGLFWKAKITKLYEELGQMEVVFFSPEDEAKFEQGFRELKLAERAARKEARRQTYGSS 180

Query: 181 SKQDQI-EGRAD---SSEKAADA--------DGSQQMVVNA 210
           S  DQI EGRAD   + ++AAD         DGSQQ V NA
Sbjct: 181 SNHDQIEEGRADRHGTGKEAADGSEGGSHGDDGSQQWVANA 221

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BLAST of Sed0019969 vs. ExPASy Swiss-Prot
Match: P36525 (54S ribosomal protein L24, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MRPL24 PE=1 SV=2)

HSP 1 Score: 68.6 bits (166), Expect = 9.9e-11
Identity = 43/133 (32.33%), Postives = 70/133 (52.63%), Query Frame = 0


Query: 6   REIMKKVLKKVGENNLAPGVKDSLKKCIPDSKV----VMNRAKRGIFAGRHIQYGNRISE 65
           R+I K+   +VG+       K+  +K  PD K     +  ++ +G++ G  +Q+GN ISE
Sbjct: 30  RKIAKQPNYQVGDAKPLHMPKE--RKKFPDYKYGESNIFKQSNKGLYGGSFVQFGNNISE 89

Query: 66  DGGNKSRRHWKPNIQEKRLFSYILDRHIRVKVSTHALRCIDKVGGIDEYLLKTPYHKMDT 125
               K+R+ W PN+ +K L+S  L+R I +K++   L+ I K GGID YL K    ++  
Sbjct: 90  SKA-KTRKKWLPNVVKKGLWSETLNRKISIKMTAKVLKTISKEGGIDNYLTKEKSARIKE 149

Query: 126 EVGLFWKAKIEKL 135
                WK +   L
Sbjct: 150 LGPTGWKLRYRVL 159

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BLAST of Sed0019969 vs. ExPASy Swiss-Prot
Match: A0L5U1 (50S ribosomal protein L28 OS=Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1) OX=156889 GN=rpmB PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 6.4e-10
Identity = 32/71 (45.07%), Postives = 45/71 (63.38%), Query Frame = 0


Query: 43  AKRGIFAGRHIQYGNRISEDGGNKSRRHWKPNIQEKRLFSYILDRHIRVKVSTHALRCID 102
           A++    G+  Q GN++S     K+RR W PNIQ K L+S  L + ++V +ST ALR +D
Sbjct: 2   ARKRTLGGKAPQAGNKVSH-SQRKTRRQWMPNIQTKALWSITLGQSVKVTISTSALRSVD 61

Query: 103 KVGGIDEYLLK 114
             GG+D YLLK
Sbjct: 62  NAGGLDNYLLK 71

[Close]

BLAST of Sed0019969 vs. ExPASy Swiss-Prot
Match: A9HS05 (50S ribosomal protein L28 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / CCUG 37298 / CIP 103539 / LMG 7603 / PAl5) OX=272568 GN=rpmB PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.4e-09
Identity = 32/80 (40.00%), Postives = 50/80 (62.50%), Query Frame = 0


Query: 43  AKRGIFAGRHIQYGNRISEDGGNKSRRHWKPNIQEKRLFSYILDRHIRVKVSTHALRCID 102
           ++R    G+ +  GN +S    NKSRR + PN+QE  L S IL   +R+++ST+ +R ++
Sbjct: 2   SRRCQITGKGVLTGNNVSH-ANNKSRRRFLPNLQETSLLSDILGSAVRLRLSTNGIRTVE 61

Query: 103 KVGGIDEYLLKTPYHKMDTE 123
             GG+D +LL TP  K+ TE
Sbjct: 62  HNGGLDAFLLSTPNRKLPTE 80

[Close]

BLAST of Sed0019969 vs. ExPASy Swiss-Prot
Match: Q5FUP5 (50S ribosomal protein L28 OS=Gluconobacter oxydans (strain 621H) OX=290633 GN=rpmB PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.4e-09
Identity = 35/94 (37.23%), Postives = 56/94 (59.57%), Query Frame = 0


Query: 43  AKRGIFAGRHIQYGNRISEDGGNKSRRHWKPNIQEKRLFSYILDRHIRVKVSTHALRCID 102
           ++R    G+ +  GN +S    NKSRR + PN+QE  L S IL   +R+++ST  +R ++
Sbjct: 2   SRRCQITGKGVLTGNNVSH-ANNKSRRRFLPNLQETTLISDILGASVRMRLSTDGIRTVE 61

Query: 103 KVGGIDEYLLKTPYHKMDTEVGLFWKAKIEKLYE 137
             GG+D +LL TP  K+ TE  +  K +I ++ E
Sbjct: 62  HNGGLDSFLLGTPNRKLPTEAQVI-KRRILRVQE 93

[Close]

BLAST of Sed0019969 vs. ExPASy Swiss-Prot
Match: B6IW31 (50S ribosomal protein L28 OS=Rhodospirillum centenum (strain ATCC 51521 / SW) OX=414684 GN=rpmB PE=3 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 7.1e-09
Identity = 34/87 (39.08%), Postives = 52/87 (59.77%), Query Frame = 0


Query: 50  GRHIQYGNRISEDGGNKSRRHWKPNIQEKRLFSYILDRHIRVKVSTHALRCIDKVGGIDE 109
           G+ +Q GN +S    NKSRR W PN+QE  L S  L R +R+++ST+ +R I+  GG+D 
Sbjct: 9   GKGVQTGNNVSH-ANNKSRRRWLPNLQETSLLSDTLGRMVRLRLSTNGIRTIEHKGGLDA 68

Query: 110 YLLKTPYHKMDTEVGLFWKAKIEKLYE 137
            LL  P  +++ +     K +I+K  E
Sbjct: 69  ALLDIPDARLNQDARRV-KKQIQKAIE 93

[Close]

BLAST of Sed0019969 vs. ExPASy TrEMBL
Match: A0A6J1E6M9 (uncharacterized protein LOC111431195 OS=Cucurbita moschata OX=3662 GN=LOC111431195 PE=3 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 9.7e-94
Identity = 180/220 (81.82%), Postives = 199/220 (90.45%), Query Frame = 0


Query: 1   MAFRGREIMKKVLKKVGENNLAPGVKDSLKKCIPDSKVVMNRAKRGIFAGRHIQYGNRIS 60
           MAFRG+E+MKK+LKKVGENNLAPGVKDSLKKCIPDSK+VMNRAKRGIFAGRHIQ+GNRIS
Sbjct: 1   MAFRGKEMMKKILKKVGENNLAPGVKDSLKKCIPDSKIVMNRAKRGIFAGRHIQFGNRIS 60

Query: 61  EDGGNKSRRHWKPNIQEKRLFSYILDRHIRVKVSTHALRCIDKVGGIDEYLLKTPYHKMD 120
           EDGGNKSRR+WKPN+QEKRLFSYILDRHIRVKV+THALRCIDK GGIDEYLLKTPYHKMD
Sbjct: 61  EDGGNKSRRNWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMD 120

Query: 121 TEVGLFWKAKIEKLYEELGQMEVVFFSPEDEAKFEQGFKDLELSKKEARKESRRKMYGSS 180
           TE+GLFWKAKIEKLYEELGQMEVVFFSPEDEAKFEQGF+DL+LS++ ARKE+RR+MYGSS
Sbjct: 121 TEIGLFWKAKIEKLYEELGQMEVVFFSPEDEAKFEQGFRDLKLSERAARKEARRRMYGSS 180

Query: 181 SKQDQIE----GRADSSEKAADA-------DGSQQMVVNA 210
           ++ DQIE     RA SSE+ A +       DG QQ V NA
Sbjct: 181 TQHDQIEEGQADRAGSSEEVAGSEGGSHGDDGPQQCVANA 220

[Close]

BLAST of Sed0019969 vs. ExPASy TrEMBL
Match: A0A6J1HLI0 (uncharacterized protein LOC111465250 OS=Cucurbita maxima OX=3661 GN=LOC111465250 PE=3 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 1.1e-92
Identity = 175/205 (85.37%), Postives = 196/205 (95.61%), Query Frame = 0


Query: 1   MAFRGREIMKKVLKKVGENNLAPGVKDSLKKCIPDSKVVMNRAKRGIFAGRHIQYGNRIS 60
           MAFRG+E+MKK+LKKVGENNLAPGVKDSLKKCIPDSKVVMNRAKRGIFAGRHIQ+GNR+S
Sbjct: 1   MAFRGKEMMKKILKKVGENNLAPGVKDSLKKCIPDSKVVMNRAKRGIFAGRHIQFGNRVS 60

Query: 61  EDGGNKSRRHWKPNIQEKRLFSYILDRHIRVKVSTHALRCIDKVGGIDEYLLKTPYHKMD 120
           EDGGNKSRR WKPN+QEKRLFSYILDRHIRVKV+THALRCIDK GGIDEYLLKTPYHKMD
Sbjct: 61  EDGGNKSRRSWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMD 120

Query: 121 TEVGLFWKAKIEKLYEELGQMEVVFFSPEDEAKFEQGFKDLELSKKEARKESRRKMYGSS 180
           TE+GLFWKAKIEKLYEELGQMEVVFFSPEDEAKFEQGF+DL+LS++ ARKE+RR+MYGSS
Sbjct: 121 TEIGLFWKAKIEKLYEELGQMEVVFFSPEDEAKFEQGFRDLKLSERAARKETRRRMYGSS 180

Query: 181 SKQDQI-EGRAD---SSEKAADADG 202
           +++DQI EG+AD   SSE+ A ++G
Sbjct: 181 TQRDQIEEGQADRVGSSEEVAGSEG 205

[Close]

BLAST of Sed0019969 vs. ExPASy TrEMBL
Match: A0A6J1CUG4 (uncharacterized protein LOC111014872 OS=Momordica charantia OX=3673 GN=LOC111014872 PE=3 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 4.5e-91
Identity = 179/221 (81.00%), Postives = 198/221 (89.59%), Query Frame = 0


Query: 1   MAFRGREIMKKVLKKVGENNLAPGVKDSLKKCIPDSKVVMNRAKRGIFAGRHIQYGNRIS 60
           MAFRG+E+MKKVLKKVGE NLAPGVK+SLKKCIPDSKVVMNRAKRGIFAGRHIQ+GNR+S
Sbjct: 1   MAFRGKEMMKKVLKKVGEINLAPGVKESLKKCIPDSKVVMNRAKRGIFAGRHIQFGNRVS 60

Query: 61  EDGGNKSRRHWKPNIQEKRLFSYILDRHIRVKVSTHALRCIDKVGGIDEYLLKTPYHKMD 120
           EDGGNKSRR WKPN+QEKRLFSYILDRHIRVKV+THALRCIDKVGGIDEYLLKTPYHKMD
Sbjct: 61  EDGGNKSRRTWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKVGGIDEYLLKTPYHKMD 120

Query: 121 TEVGLFWKAKIEKLYEELGQMEVVFFSPEDEAKFEQGFKDLELSKKEARKESRRKMYGSS 180
           TE+GLFWKAKI KLYEELGQMEVVFFSPEDEAKFEQGF++L+L+++ ARKE+RR+ YGSS
Sbjct: 121 TEIGLFWKAKITKLYEELGQMEVVFFSPEDEAKFEQGFRELKLAERAARKEARRQTYGSS 180

Query: 181 SKQDQI-EGRAD---SSEKAADA--------DGSQQMVVNA 210
           S  DQI EGRAD   + ++AAD         DGSQQ V NA
Sbjct: 181 SNHDQIEEGRADRHGTGKEAADGSEGGSHGDDGSQQWVANA 221

[Close]

BLAST of Sed0019969 vs. ExPASy TrEMBL
Match: A0A6A3D064 (Pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00000340pilonHSYRG00012 PE=3 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 1.1e-86
Identity = 164/219 (74.89%), Postives = 195/219 (89.04%), Query Frame = 0


Query: 1   MAFRGREIMKKVLKKVGENNLAPGVKDSLKKCIPDSKVVMNRAKRGIFAGRHIQYGNRIS 60
           MAFRG+E+MKK++KKVGENNLAPGVK+ LKKCIPDSKVVMNRAKRG++AGRHIQ+GN IS
Sbjct: 1   MAFRGKEMMKKMIKKVGENNLAPGVKEQLKKCIPDSKVVMNRAKRGLYAGRHIQFGNLIS 60

Query: 61  EDGGNKSRRHWKPNIQEKRLFSYILDRHIRVKVSTHALRCIDKVGGIDEYLLKTPYHKMD 120
           EDGGNKSRR WKPN+QEKRLFSYILDRHIRVKV+THALRCIDK GG+DEYLLKTPYHKMD
Sbjct: 61  EDGGNKSRRSWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGVDEYLLKTPYHKMD 120

Query: 121 TEVGLFWKAKIEKLYEELGQMEVVFFSPEDEAKFEQGFKDLELSKKEARKESRRKMYGSS 180
           TE+GL+WKAKIEK+YEELGQ EVVFFSPEDEAKFEQGFKDL+L+++EAR+++RR+MYG S
Sbjct: 121 TEMGLYWKAKIEKMYEELGQREVVFFSPEDEAKFEQGFKDLKLAEREARRDARRQMYGWS 180

Query: 181 SKQDQIE-GR---------ADSSEKAADADGSQQMVVNA 210
            KQ++IE GR         A++ + ++D D  +Q V N+
Sbjct: 181 GKQEEIEDGRTSQDSYDETANAGDDSSDGDLHKQWVANS 219

[Close]

BLAST of Sed0019969 vs. ExPASy TrEMBL
Match: A0A0A0L1P8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G005030 PE=3 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 5.7e-86
Identity = 165/220 (75.00%), Postives = 191/220 (86.82%), Query Frame = 0


Query: 1   MAFRGREIMKKVLKKVGENNLAPGVKDSLKKCIPDSKVVMNRAKRGIFAGRHIQYGNRIS 60
           MAFRG+E+MKK+LKKVGENNLAPGVKDSLKKCIPDSK+VM RA RGI+AGRHI++GNR+S
Sbjct: 1   MAFRGKEMMKKILKKVGENNLAPGVKDSLKKCIPDSKIVMGRANRGIYAGRHIRFGNRVS 60

Query: 61  EDGGNKSRRHWKPNIQEKRLFSYILDRHIRVKVSTHALRCIDKVGGIDEYLLKTPYHKMD 120
           EDGGNKSRR+WKPN+QEKRLFSYILDRHIRVKV+THALRCIDK GGIDEYLLKTPYHKMD
Sbjct: 61  EDGGNKSRRNWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMD 120

Query: 121 TEVGLFWKAKIEKLYEELGQMEVVFFSPEDEAKFEQGFKDLELSKKEARKESRRKMYGSS 180
           TE+GLFWK+KIE LYEELG+MEVVFFSPEDE KFEQ FK+L+LS++ AR+E+RR+MYGSS
Sbjct: 121 TELGLFWKSKIETLYEELGKMEVVFFSPEDEVKFEQRFKELKLSERAARREARRQMYGSS 180

Query: 181 SKQDQI-----EGRADSSEKAADADGS-------QQMVVN 209
           +K +QI     +G   S E AA ++G        QQ V N
Sbjct: 181 AKLNQIKEGGEKGNGSSEEAAASSEGGSHGDDSHQQWVAN 220

[Close]

BLAST of Sed0019969 vs. TAIR 10
Match: AT4G31460.1 (Ribosomal L28 family )

HSP 1 Score: 282.7 bits (722), Expect = 2.4e-76
Identity = 140/206 (67.96%), Postives = 168/206 (81.55%), Query Frame = 0


Query: 1   MAFRGREIMKKVLKKVGENNLAPGVKDSLKKCIPDSKVVMNRAKRGIFAGRHIQYGNRIS 60
           MAFRG+E+MKK++KKVG  N+ P +K+ LK C+PD+KVVM RAKRG++AGRHIQYGNR+S
Sbjct: 1   MAFRGKEMMKKLVKKVGAENITPELKEKLKACVPDTKVVMGRAKRGLYAGRHIQYGNRVS 60

Query: 61  EDGGNKSRRHWKPNIQEKRLFSYILDRHIRVKVSTHALRCIDKVGGIDEYLLKTPYHKMD 120
           EDGGNKSRR WKPN+QEKRLFSYI D HI+VKV+THALRCIDK GGIDEYLLKTPY KMD
Sbjct: 61  EDGGNKSRRCWKPNVQEKRLFSYIFDSHIKVKVTTHALRCIDKAGGIDEYLLKTPYQKMD 120

Query: 121 TEVGLFWKAKIEKLYEELGQMEVVFFSPEDEAKFEQGFKDLELSKKEARKESRR--KMYG 180
           TE+GL+WK K+E  Y ELGQMEV FF+PEDEAK EQGFKDL ++KK+AR+E+RR  +  G
Sbjct: 121 TEMGLYWKTKVEARYAELGQMEVAFFNPEDEAKLEQGFKDLNIAKKDARREARRTFRKKG 180

Query: 181 SSSKQDQ---IEGRADSSEKAADADG 202
             +K D+   IEG   S     D +G
Sbjct: 181 GGNKGDEEASIEGGGGSESHQEDDNG 206

The following BLAST results are available for this feature:

BLAST of Sed0019969 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022923524.1	2.0e-93	81.82	uncharacterized protein LOC111431195 [Cucurbita moschata]	[more]
XP_023553194.1	9.9e-93	81.36	uncharacterized protein LOC111810681 [Cucurbita pepo subsp. pepo]	[more]
KAG6577758.1	9.9e-93	81.36	hypothetical protein SDJN03_25332, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022965371.1	2.2e-92	85.37	uncharacterized protein LOC111465250 [Cucurbita maxima]	[more]
XP_022145425.1	9.3e-91	81.00	uncharacterized protein LOC111014872 [Momordica charantia]	[more]

BLAST of Sed0019969 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P36525	9.9e-11	32.33	54S ribosomal protein L24, mitochondrial OS=Saccharomyces cerevisiae (strain ATC...	[more]
A0L5U1	6.4e-10	45.07	50S ribosomal protein L28 OS=Magnetococcus marinus (strain ATCC BAA-1437 / JCM 1...	[more]
A9HS05	1.4e-09	40.00	50S ribosomal protein L28 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037...	[more]
Q5FUP5	2.4e-09	37.23	50S ribosomal protein L28 OS=Gluconobacter oxydans (strain 621H) OX=290633 GN=rp...	[more]
B6IW31	7.1e-09	39.08	50S ribosomal protein L28 OS=Rhodospirillum centenum (strain ATCC 51521 / SW) OX...	[more]

BLAST of Sed0019969 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E6M9	9.7e-94	81.82	uncharacterized protein LOC111431195 OS=Cucurbita moschata OX=3662 GN=LOC1114311...	[more]
A0A6J1HLI0	1.1e-92	85.37	uncharacterized protein LOC111465250 OS=Cucurbita maxima OX=3661 GN=LOC111465250...	[more]
A0A6J1CUG4	4.5e-91	81.00	uncharacterized protein LOC111014872 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A6A3D064	1.1e-86	74.89	Pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protei...	[more]
A0A0A0L1P8	5.7e-86	75.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G005030 PE=3 SV=1	[more]

BLAST of Sed0019969 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G31460.1	2.4e-76	67.96	Ribosomal L28 family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026569	Ribosomal protein L28/L24	PFAM	PF00830	Ribosomal_L28	coord: 46..103 e-value: 1.2E-18 score: 66.9
IPR026569	Ribosomal protein L28/L24	PANTHER	PTHR13528	39S RIBOSOMAL PROTEIN L28, MITOCHONDRIAL	coord: 1..199
IPR037147	Ribosomal protein L28/L24 superfamily	GENE3D	2.30.170.40	Ribosomal protein L28/L24	coord: 47..118 e-value: 3.7E-21 score: 76.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 168..209
None	No IPR available	PANTHER	PTHR13528:SF11	BNAC03G67590D PROTEIN	coord: 1..199
IPR001383	Ribosomal protein L28	HAMAP	MF_00373	Ribosomal_L28	coord: 42..110 score: 14.095756
IPR034704	L28p-like	SUPERFAMILY	143800	L28p-like	coord: 43..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0019969.1	Sed0019969.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005762	mitochondrial large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome