Sed0019961 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCATTAGGGTTTTTTAGAGGTTTTAAAAAAACAAGAGAATTTACCATCAGCAGCACATTCTACCTGTTGTATTATATTTGTAGCAGAATTTTTAAAATAATTCATCTAAAACATATTTGTTTCTATCACTCAATTAGTGATATAACTCAATTAGGATTTCTATCACTAATAAAAAACTCAAGTAGTAATAGAATGAGTCTACCATTGATTGAATTCTATCACTAATAAAATTCAATAAATGATAGAAATCAATTTGAATTTTCTATTGCAAATGAATTATTTTATATTTTGTGCTATAAATAAAAATATTTTGCCATTATTATAGATGCAAAATCTCCTTTAAAACGGTATATTAAAATGGAAATAACCCATTTATATAAATATAACATTTAAAATACTCTTCTTTTACAATCCCAAAGCAGCAGCCTCAACCCCTTACCCCTTAATTCTCAGCCATCAAATCAGCCTTGCTCCATTGGTGTCGGATCCCCCATCGCGCTCAGGATCATGCCAGGTGGCGTTTTCTTGTTGTACGAGGAGGCTTCACGCGAATCCCTTTAGCCACATGTGGATCAGCGGTAGCAGTGCGTCCGTCACTACTGTGCGCAACAGTGTTGTCGAAGTGACACGCTTGCTCCACGTCAAGCTGTCGTCTCGTGTTCGTTCGACATTGCTCAGTCGCGTTCGCCTGACAGCTCGTGTCTGACATACCCCATTGCCAAGCTTATTCGTAGCTGCTTTGTCCCGAGTTTCCCAGTGAGCAAGCTCGTCCCATCCAGCAAGCGTGTCATTCGTCTTAGTCTTTTATTTGTTGATCTTTGGTAATCCCTCTTTCTTACTCGAGTTTGGTTGCGAGCTCCAATCACCATTTTTTCCACAATGCAAGCTTCAAAACCCGTTTATTCTCTTGTAGATATAAAAAGTTCGAGAGCACTGTACACGAATACGAGATCAGATCCACAATCAGGGCGTCGAGATGAAGAGAAAGAGGTATGATTAGCATATTCCCGTAGAGACATGCCGCCGCTGGCCGACCACACGCCATTACACTCCAATGACACGTCGTTAGCTTGGTTTCTTGCTCTCGTTCGTGTAGTGAGCTTTGTTTGGACTCGTTCATCCCCATTTGTGCGTTCATTTGACTTCTATATGTAATTTCATGTTTATGCGACCCTTGGGATTTGTCGTTTGATTCGTAGTTTATCTTGGCTAGTTTGGTCGAGTCGTCAGGAAGATAAAGAGTTGTATGAAACCCCTAGTATTCTTCTCAAACTAGAGAGGTGTGTGAAACCCCTAACATCCTTCTCAAGCTAAGAAGCTGTGTGACACACCTAGTATCCTTTTAAAAAGCGAAATTAAATATAGACTAACATTTCTATGTATTCGGTAGTAGCAACCGAGCTTATCGAGGCTACAACACTGGGAAACAATTGGACAAGCGCGTGACCAATCACGGTAAGGTAATTGTGGAGTTTAGTGAGGAATACGTAAAGCTCGTATGCGAGGAGGCCATAACATTGAGTTATCAGATTGGCGTGTTGGTTCGAAAAACATTTCCACTTTGTATTCATGGGTGGAAAAAGGTTCCTAAGGAGACCAAGGATCTCGTAAAGTTGTCGTTGTTGGTTAGTTGATTAACATTTTATTAAACTTAAATTTAATTGTTTTGACATAGTCTTATATGCGTAAATTTTTTAACTTTGTAGACACATTTTATTTTGGATTTAAAAGATCCAGCTGTTGTTAGGACAACAGAGAACACTATGAAAGTAGTGTTCAAAGAGCAAAGACATGAGATGTACAAGCATTATTGGTAAGAATTATTCATAAACATTATCGTTACATTTTTGTTCATTATTATTGATGCTAATATTGTTTCTCCAACAGCATGATGCCCCTAGAGCTTAGACGAGTGACACCGCATAACAGAGTGACTGAGCTCGAAGATTGAGAATATCTAAGCAACTACTGGGAATCACCAAAATGGCTGGAAAAGAGTAGAAAAGCGAAAAATTGTCGTTCGGGGCTCCAATACCATCATCGAACAGGAAATAAGTCGTTCCTGTACCATAGTGAGAAGGTTAGTAATATTTTTGGTTCATTGTGTTATTAAATGATTTAATGCATATTCTTATTCTTGAAGGATTTTGATGAATATTCTTTTTTAACTATAGAAAAGGAAAGAAACTGGTACTCAACTAGACGCAGTGGAACTGTGGCATGATGTTCGAAACCATTCAGTGAAGGGATGGCCAGGTCCTAAAGCCGTTGAGCTTCACGTGAGTATTGCTTATAATATGTTAATCTTTTTTGTATTTCATATGTTAAAAAATAATAAATGTATTTCATGTATTTGTAGGAAAAGATGATAGCCCTGCAAGAAGCACCAACTCCTGAGGGGTCCCAACCTATGACTCAGTCAGAAATTTGTGCAACTGTGTTAGGGCATCGTTCTGACATAGTTAAGGGTATGGGTTATCTCCCTTATGGAAGGAGATAA ATGGCATTAGGTAGCAACCGAGCTTATCGAGGCTACAACACTGGGAAACAATTGGACAAGCGCGTGACCAATCACGGTAAGAAAAGGAAAGAAACTGGTACTCAACTAGACGCAGTGGAACTGTGGCATGATGTTCGAAACCATTCAGTGAAGGGATGGCCAGGTCCTAAAGCCGTTGAGCTTCACGAAAAGATGATAGCCCTGCAAGAAGCACCAACTCCTGAGGGGTCCCAACCTATGACTCAGTCAGAAATTTGTGCAACTGTGTTAGGGCATCGTTCTGACATAGTTAAGGGTATGGGTTATCTCCCTTATGGAAGGAGATAA ATGGCATTAGGTAGCAACCGAGCTTATCGAGGCTACAACACTGGGAAACAATTGGACAAGCGCGTGACCAATCACGGTAAGAAAAGGAAAGAAACTGGTACTCAACTAGACGCAGTGGAACTGTGGCATGATGTTCGAAACCATTCAGTGAAGGGATGGCCAGGTCCTAAAGCCGTTGAGCTTCACGAAAAGATGATAGCCCTGCAAGAAGCACCAACTCCTGAGGGGTCCCAACCTATGACTCAGTCAGAAATTTGTGCAACTGTGTTAGGGCATCGTTCTGACATAGTTAAGGGTATGGGTTATCTCCCTTATGGAAGGAGATAA MALGSNRAYRGYNTGKQLDKRVTNHGKKRKETGTQLDAVELWHDVRNHSVKGWPGPKAVELHEKMIALQEAPTPEGSQPMTQSEICATVLGHRSDIVKGMGYLPYGRR Homology
BLAST of Sed0019961 vs. NCBI nr
Match: RWR86313.1 (Transposase, Ptta/En/Spm, plant [Cinnamomum micranthum f. kanehirae]) HSP 1 Score: 68.6 bits (166), Expect = 3.9e-08 Identity = 30/67 (44.78%), Postives = 39/67 (58.21%), Query Frame = 0
BLAST of Sed0019961 vs. NCBI nr
Match: KAA8538994.1 (hypothetical protein F0562_025686 [Nyssa sinensis]) HSP 1 Score: 65.9 bits (159), Expect = 2.5e-07 Identity = 29/76 (38.16%), Postives = 45/76 (59.21%), Query Frame = 0
BLAST of Sed0019961 vs. NCBI nr
Match: RVW71840.1 (hypothetical protein CK203_061113 [Vitis vinifera]) HSP 1 Score: 65.5 bits (158), Expect = 3.3e-07 Identity = 37/107 (34.58%), Postives = 56/107 (52.34%), Query Frame = 0
BLAST of Sed0019961 vs. NCBI nr
Match: RVW69898.1 (hypothetical protein CK203_059139 [Vitis vinifera]) HSP 1 Score: 65.5 bits (158), Expect = 3.3e-07 Identity = 37/107 (34.58%), Postives = 56/107 (52.34%), Query Frame = 0
BLAST of Sed0019961 vs. NCBI nr
Match: RVW93403.1 (hypothetical protein CK203_035135 [Vitis vinifera]) HSP 1 Score: 65.5 bits (158), Expect = 3.3e-07 Identity = 37/107 (34.58%), Postives = 56/107 (52.34%), Query Frame = 0
BLAST of Sed0019961 vs. ExPASy TrEMBL
Match: A0A5B6ZAY8 (Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_010731 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 3.8e-09 Identity = 32/78 (41.03%), Postives = 44/78 (56.41%), Query Frame = 0
BLAST of Sed0019961 vs. ExPASy TrEMBL
Match: A0A5B6ZBJ5 (Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_010732 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 3.8e-09 Identity = 32/78 (41.03%), Postives = 44/78 (56.41%), Query Frame = 0
BLAST of Sed0019961 vs. ExPASy TrEMBL
Match: A0A5B6ZBC3 (Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_010730 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 6.5e-09 Identity = 31/73 (42.47%), Postives = 42/73 (57.53%), Query Frame = 0
BLAST of Sed0019961 vs. ExPASy TrEMBL
Match: A0A443P6A9 (Transposase, Ptta/En/Spm, plant OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_01520500 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 1.9e-08 Identity = 30/67 (44.78%), Postives = 39/67 (58.21%), Query Frame = 0
BLAST of Sed0019961 vs. ExPASy TrEMBL
Match: A0A5J5B8Q0 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_025686 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 1.2e-07 Identity = 29/76 (38.16%), Postives = 45/76 (59.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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