Sed0019959 (gene) Chayote v1

Overview


Name	Sed0019959
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Location	LG04: 12511164 .. 12512803 (-)
RNA-Seq Expression	Sed0019959
Synteny	Sed0019959

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTATCTACCCATGAAACTCAATTCAAAAGGAGAAAAAAGAGTAATTTTAAGGTTTCAAGATATGATTGAATTACTTCTTCGCAAGGCTCCTCCTCCCCCTCCTCCTCCTGGTATGTTGATCCTTATTAAAAGGGAATTTGTCTTATATATCATATTTTTGGCTTTTCATTATAATTATAGCAAATTTTTAAAAATAATTTTATTCATAGCATATTTTGCCCAAAATTCCTATTCTAACATTATTAGACTTCTATCAGTTGGACCGATAGATTTTAGACTTCTATCAGTGGAACTGATAGACTTTAGACTTCTATCAGTTGAATTGATAGACTTTAGACTTTTATCAAATTCAACTAATAGACGTCTATTAGTTCAACTAATAGACTTTAGACTTCTATCAATTCAACCGATAGACTTCAATCGATTTTGAGTGATTGAACAATGCAAAGTGATAAACTTCAATCATTTTTGTGCCACGAATGAATAAGTTTGGGAATTGTGTTATACATGAAATTATTTTACTTTTTCTTAATATTCATGAAAAATCCCCTTATTAAAATTTCTAAAATATTTTTTCAAAAATGGTTTCAAAATCAACATTGAATCCTCGTGTGAAAAATAATGTAAAAGATTAAAGCAATTTATTATCTTCTTTAAAGTAAGTTTTTACTATATGTGGTGATCACTATGTTTAACTTGATTGTATAAGATGAAGTCTATTATAAAAAAATTAATGTTAACATGAATATATTTGTTAATATATTAATAATAGTCATTTTCTTATTTTTGTAGTTATGGAGATTGATCTTCCTCCTCCTCTTCCTCGTCCCATCCCTCCTCCTCCTGCTGGTATGCTCATCTTTATTTTTAATTCCTTAAATATTGTTTCAAAAATGGTTTCCAAATCGTCGTAGAATCATCGTGTGGAAGATAATCTAAAAGATTAAAGTAATTTATAATCTTCCTTAAAGCAAGTCTCTTCTATGTCGTGATCAGTATGTTTAGTTTGATTGTATAAGATGATATCTATTATCAAATTTTTTTTAATATGAATGTATTTGTTAATATATTAACAATACTTAATTTCTTATTTTTGTAGCTGGAGAGATTGAACCTTCTCATTTTCCTCTTTTTTCTCCTCCTCCCCCTCCTCCTCCGGGTATGTTCATCCTTATTTTTTATTCCATAAATATTTTTTCAAAAATGGTTTCCAAAATTGTCGTCGAATCCCGTGCGAAACCTAATATAAAAGATTAAAGAAATTTATTATCTTTTTAAAAGCGTATTTTTAACTTGATTGTATAAGATAATGCCATTATCAAAATTTGTTAATATGATTGTATTTGTTATTATATTAACAATAGTTATTTTCTTATTTTTGTAGTTATGGAGAAACAAATTTGGCTTCAACTTCTTGATGTTATACTCGGCATGGCTATCATGATCATACAAAAAGAGAACCCTTCCGTCAAAGTTCAACCAATTCCATATGGATCATCCGTGATTGTTATGGGTTAGAGTGTGACATGAGAGGTTGTATGTATATATTAGAGTTATATGCACGATGTATGCTTACATATAACTTAAATTAATGAAATAAAGGTATCTTTTTCTTTTTTATTTTGAGATCATGAAATAAA

mRNA sequence

CTATCTACCCATGAAACTCAATTCAAAAGGAGAAAAAAGAGTAATTTTAAGGTTTCAAGATATGATTGAATTACTTCTTCGCAAGGCTCCTCCTCCCCCTCCTCCTCCTGTTATGGAGATTGATCTTCCTCCTCCTCTTCCTCGTCCCATCCCTCCTCCTCCTGCTGCTGGAGAGATTGAACCTTCTCATTTTCCTCTTTTTTCTCCTCCTCCCCCTCCTCCTCCGGTTATGGAGAAACAAATTTGGCTTCAACTTCTTGATGTTATACTCGGCATGGCTATCATGATCATACAAAAAGAGAACCCTTCCGTCAAAGTTCAACCAATTCCATATGGATCATCCGTGATTGTTATGGGTTAGAGTGTGACATGAGAGGTTGTATGTATATATTAGAGTTATATGCACGATGTATGCTTACATATAACTTAAATTAATGAAATAAAGGTATCTTTTTCTTTTTTATTTTGAGATCATGAAATAAA

Coding sequence (CDS)

ATGAAACTCAATTCAAAAGGAGAAAAAAGAGTAATTTTAAGGTTTCAAGATATGATTGAATTACTTCTTCGCAAGGCTCCTCCTCCCCCTCCTCCTCCTGTTATGGAGATTGATCTTCCTCCTCCTCTTCCTCGTCCCATCCCTCCTCCTCCTGCTGCTGGAGAGATTGAACCTTCTCATTTTCCTCTTTTTTCTCCTCCTCCCCCTCCTCCTCCGGTTATGGAGAAACAAATTTGGCTTCAACTTCTTGATGTTATACTCGGCATGGCTATCATGATCATACAAAAAGAGAACCCTTCCGTCAAAGTTCAACCAATTCCATATGGATCATCCGTGATTGTTATGGGTTAG

Protein sequence

MKLNSKGEKRVILRFQDMIELLLRKAPPPPPPPVMEIDLPPPLPRPIPPPPAAGEIEPSHFPLFSPPPPPPPVMEKQIWLQLLDVILGMAIMIIQKENPSVKVQPIPYGSSVIVMG

Homology

The following BLAST results are available for this feature:

BLAST of Sed0019959 vs.


Match Name	E-value	Identity	Description

BLAST of Sed0019959 vs.


Match Name	E-value	Identity	Description

BLAST of Sed0019959 vs.


Match Name	E-value	Identity	Description

BLAST of Sed0019959 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0019959.1	Sed0019959.1	mRNA