Homology
BLAST of Sed0019957 vs. NCBI nr
Match:
MCH79484.1 (RNA-directed DNA polymerase (Reverse transcriptase) [Trifolium medium])
HSP 1 Score: 144.1 bits (362), Expect = 2.0e-30
Identity = 97/286 (33.92%), Postives = 136/286 (47.55%), Query Frame = 0
Query: 12 CLDIIFLKPLGKKCLWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGNFY 71
C+D+ L P K LWNLK+P ++ FMWRL H+ LPT + L R +P CV C
Sbjct: 184 CVDL--LHPHWKN-LWNLKIPPRVSSFMWRLAHQCLPTRVNLTTRGIPCDDTCVSCETLA 243
Query: 72 ESFFHIFFECPCANALWKALDLSFHPESLKLLD---TQSAIEFLGAGLSKDNLAYAVICL 131
ES HIFF C A W +DL H L L T +FL LS A + L
Sbjct: 244 ESHMHIFFVCSKAMECWGRIDLGHHVRELLLRTSEFTTLLFDFLDR-LSFIQQQLAAMLL 303
Query: 132 WSIWIDRN-KVNFNEVVPPVNVRIEWIRQYLEGVLKSNDMESHKHVEYDSCSTVAPVRWI 191
WSIW R+ K+ + P + E +H+ + + W+
Sbjct: 304 WSIWKSRDLKLWESSSTSPTLIVTRAKETLHEWSCMQRIKPQVQHLAHTN-------TWV 363
Query: 192 APWPGFLKLNVDASCSPLAPKLGFGLIFRDHMGLCKFASSIFKPVFCDILSAEALALLEG 251
P G +K NVD + GFG+ FRD +G F S P F +L AEA+ALL+
Sbjct: 364 KPTIGVIKCNVDVTTFNNNTMAGFGMCFRDSLGQFIFGKSAHLPSFGFVLEAEAVALLQS 423
Query: 252 LKVADNLGFHNLIIESDSKTLVDAILGNRLSLSPQGIILDEIRLLL 294
+ A ++G H++I E+D+KTL +AI + G I+ + R+LL
Sbjct: 424 IHTAISIGLHSVIFETDNKTLANAINSTSAHNNEFGDIVTQCRVLL 458
BLAST of Sed0019957 vs. NCBI nr
Match:
XP_031094430.1 (uncharacterized protein LOC115998901 [Ipomoea triloba])
HSP 1 Score: 137.9 bits (346), Expect = 1.4e-28
Identity = 85/277 (30.69%), Postives = 141/277 (50.90%), Query Frame = 0
Query: 19 KPLGKKCLWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGNFYESFFHIF 78
+ LG +W L +P K K F W L LPT +L ++V C++CG ES H+F
Sbjct: 51 RELGWTGVWYLNLPPKAKCFFWTLCSMCLPTKDLLYMKRVNCDQVCMLCGLANESVVHLF 110
Query: 79 FECPCANALWKALDLSFHPESLKLLDTQSAIEFLGAGLSKDNLAYAVICLWSIWIDRNKV 138
C A W+ LD ++ +L +D+QS + + LSK+ L V+ W++W +RN +
Sbjct: 111 ANCSFARDCWRELDAAW---NLSYVDSQSWLAEMWNVLSKNMLEKVVMVCWALWENRNSL 170
Query: 139 NF-NEVVPPVNVRIEWIRQYLEGVLKSNDMESHKHVEYDSCSTVAPVRWIAPWPGFLKLN 198
+ N +PP+ V ++ + E K + +H+ + + + W+ P PG+LKLN
Sbjct: 171 CWKNTGMPPITV-VQHALAFYEN-WKKVTVATHESALISNTAVLDSTSWLPPPPGYLKLN 230
Query: 199 VDASCSPLAPKLGFGLIFRDHMGLCKFASSIFKPVFCDILSAEALALLEGLKVADNLGFH 258
+D S + ++GFG + RD G+ + AEA+ E L +G+
Sbjct: 231 IDVSMAVHHRRMGFGWVCRDETGIVVGVRMNSMMGLYSVREAEAMGAREVLSWIKLMGWE 290
Query: 259 NLIIESDSKTLVDAILGNRLSLSPQGIILDEIRLLLK 295
+I+E+D++ + A+ G L SP G I+ +IRLLLK
Sbjct: 291 RVILETDAQIVTRAVQGG-LDFSPFGTIIHDIRLLLK 321
BLAST of Sed0019957 vs. NCBI nr
Match:
KAF4382082.1 (hypothetical protein F8388_001227 [Cannabis sativa])
HSP 1 Score: 137.1 bits (344), Expect = 2.4e-28
Identity = 82/273 (30.04%), Postives = 132/273 (48.35%), Query Frame = 0
Query: 24 KCLWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGNFYESFFHIFFECPC 83
K +W ++ K+K+F+WR++H ++P L KR + + C C + E H + P
Sbjct: 444 KVVWGSRLTPKMKIFIWRVFHHWIPVKTELTKRGMSMNLTCNRCKSQVEDVCHALWNIPK 503
Query: 84 ANALWKALDLSFH-PESLKLLDTQSAIEFLGAGLSKDNLAYAVICLWSIWIDRNKVNFNE 143
+ +WK H P SLK A +FL K + + + W IW RNK F
Sbjct: 504 LHKVWKHFGFLHHFPSSLK-----QAPDFLMLMKGKLSEEFFIGITWLIWYQRNKCVFQN 563
Query: 144 VVPPVNVRIEWIRQYLEGVLKSNDMESHKHVEYDSCSTVAPVRWIAPWPGFLKLNVDASC 203
++ I W + +E L S SH+++ D+ V+W P PG +N DAS
Sbjct: 564 KDIEDDIWIPWATEMMEIHLASAQTNSHQNISKDT------VKWSPPPPGTFMINTDASL 623
Query: 204 SPLAPKLGFGLIFRDHMGLCKFASSIFKPVFCDILSAEALALLEGLKVADNLGFHNLIIE 263
P G G+I RDH+G A++ F P +L AEA+A+ LK+A+ N+ I
Sbjct: 624 IEGQPGCGLGVIIRDHLGALVTATTEFIPGCLSVLLAEAMAIRLALKLAETRLMQNIFIA 683
Query: 264 SDSKTLVDAILGNRLSLSPQGIILDEIRLLLKK 296
SDS+++++A+ G + G ++D+ KK
Sbjct: 684 SDSQSVINALKGKTHINTDWGFVIDDCIQASKK 705
BLAST of Sed0019957 vs. NCBI nr
Match:
XP_019163602.1 (PREDICTED: uncharacterized protein LOC109159944 [Ipomoea nil])
HSP 1 Score: 132.9 bits (333), Expect = 4.6e-27
Identity = 87/283 (30.74%), Postives = 139/283 (49.12%), Query Frame = 0
Query: 26 LWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGNFYESFFHIFFECPCAN 85
+W LK+P+++ F+W + H + TNL +RK+ C C E H+ CP A
Sbjct: 1278 IWKLKIPSRICFFLWLVRHNKIMTNLCRTQRKLTNDDSCWTCVGTPEDTNHVLRFCPAAE 1337
Query: 86 ALWKALDLSFHPESLKL-----LDTQSAIEFLGAGLSKDNLAYAVICLWSIWIDRNKVNF 145
A+W A+ FH ++ L LD A + G DN+ +AV LW +W RN+ F
Sbjct: 1338 AIWTAILPEFHDKTKHLPLVPWLDKGVAAKGNGRRPVSDNITFAV-TLWWVWKWRNEAIF 1397
Query: 146 NEVVPPVNVRIEWIRQYLEGVLKSNDMESHKHVEYDSCSTVAP--------VRWIAPWPG 205
+V P++V+++ IR ++E + S + C P + W P PG
Sbjct: 1398 KNLVKPLSVKVQQIRTHIEDINNS----------FARCMNPIPTVDQSWKMLTWKKPPPG 1457
Query: 206 FLKLNVDASCSPLAPKLGFGLIFRDHMGLCKFASSIFKPVFCDILSAEALALLEGLKVAD 265
LKLN+D S +PL+ G G + R+ G I K C L AEA ++L+G++ A
Sbjct: 1458 TLKLNIDGSVAPLSLTAGCGGVIRNSSGEW-ITGFIAKLGTCTPLEAEAWSILKGIQFAI 1517
Query: 266 NLGFHNLIIESDSKTLVDAILGNRLSLSPQGIILDEIRLLLKK 296
G+ N++IESDS +V+ + +R S IL+ + L++
Sbjct: 1518 AKGYSNVLIESDSSDVVNFLQDSRPSCIAAHNILEACKKELRR 1548
BLAST of Sed0019957 vs. NCBI nr
Match:
XP_024190234.1 (uncharacterized protein LOC112194221 [Rosa chinensis])
HSP 1 Score: 132.1 bits (331), Expect = 7.9e-27
Identity = 88/279 (31.54%), Postives = 131/279 (46.95%), Query Frame = 0
Query: 26 LWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGNFYESFFHIFFECPCAN 85
LW L++ NK+KLF+WR FLP L +R V C CG E+ H + CP +
Sbjct: 902 LWKLRIANKVKLFLWRACKGFLPCAANLFRRHVGNSSLCCRCGREEETTIHCMWSCPWSK 961
Query: 86 ALWKALDLSFHPESLKLLDTQSAIEFLGAGL---SKDNL-AYAVICLWSIWIDRNKVNFN 145
+WK SF K S I+ + SK+ + ++VIC W +W RN+
Sbjct: 962 KVWK---FSFLNGVYKQWREPSFIDLFAHVVKTSSKEEVELFSVIC-WLLWKSRNRFKHE 1021
Query: 146 EVVPPVNVRI----EWIRQYLEGVLKSNDMESHKHVEYDSCSTVAPVRWIAPWPGFLKLN 205
VV + EW+ + + S+++V D+ V+W P LKLN
Sbjct: 1022 GVVEESKHIVWSANEWLNNFQDA------QRSNENVTKDATQKRVKVKWRPPTAPKLKLN 1081
Query: 206 VDASCSPLAPKLGFGLIFRDHMGLCKFASSIFKPVFCDILSAEALALLEGLKVADNLGFH 265
DA+ K G++ RD G K A P I++ EALA+ GL + GF
Sbjct: 1082 TDAAIDYKKKKADLGMVVRDGEGKLKCAGHKVLPGNPSIVAIEALAVYHGLLLYREAGFQ 1141
Query: 266 NLIIESDSKTLVDAILGNRLSLSPQGIILDEIRLLLKKY 297
NL++ESDS ++DA+ L LS +G +LD+I+ L +
Sbjct: 1142 NLVVESDSTIVIDALNKTELDLSVEGGVLDDIKCLASTF 1170
BLAST of Sed0019957 vs. ExPASy Swiss-Prot
Match:
P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)
HSP 1 Score: 59.3 bits (142), Expect = 8.5e-08
Identity = 55/255 (21.57%), Postives = 107/255 (41.96%), Query Frame = 0
Query: 25 CLWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGNFYESFFHIFFECPCA 84
CLW ++VP ++K F+W + ++ + T +R + C +C ES H+ +CP
Sbjct: 290 CLWKVRVPERVKTFLWLVGNQAVMTEEERHRRHLSASNVCQVCKGGVESMLHVLRDCPAQ 349
Query: 85 NALW-----KALDLSFHPESLKLLDTQSAIEFLGAGLSKDNLAYAVI---CLWSIWIDRN 144
+W + F +SL + + LG +++ ++ I +W W R
Sbjct: 350 LGIWVRVVPQRRQQGFFSKSL----FEWLYDNLGDRSGCEDIPWSTIFAVIIWWGWKWRC 409
Query: 145 KVNFNEVVPPVNVRIEWIRQYLEGVLKSNDMESHKHVEYDSCSTVAPVRWIAPWPGFLKL 204
F E R+++++++ V +++ + V + W++P G++K+
Sbjct: 410 GNIFGENT-KCRDRVKFVKEWAVEVYRAH--SGNVLVGITQPRVERMIGWVSPCVGWVKV 469
Query: 205 NVDASCSPLAPKLGFGLIFRDHMGL-C-KFASSIFKPVFCDILSAEALALLEGLKVADNL 264
N D + G + RD G C F+ +I + C AE + GL A
Sbjct: 470 NTDGASRGNPGLASAGGVLRDCTGAWCGGFSLNIGR---CSAPQAELWGVYYGLYFAWEK 529
Query: 265 GFHNLIIESDSKTLV 270
+ +E DS+ +V
Sbjct: 530 KVPRVELEVDSEVIV 534
BLAST of Sed0019957 vs. ExPASy TrEMBL
Match:
A0A392LXW3 (RNA-directed DNA polymerase (Reverse transcriptase) OS=Trifolium medium OX=97028 GN=A2U01_0000234 PE=4 SV=1)
HSP 1 Score: 144.1 bits (362), Expect = 9.7e-31
Identity = 97/286 (33.92%), Postives = 136/286 (47.55%), Query Frame = 0
Query: 12 CLDIIFLKPLGKKCLWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGNFY 71
C+D+ L P K LWNLK+P ++ FMWRL H+ LPT + L R +P CV C
Sbjct: 184 CVDL--LHPHWKN-LWNLKIPPRVSSFMWRLAHQCLPTRVNLTTRGIPCDDTCVSCETLA 243
Query: 72 ESFFHIFFECPCANALWKALDLSFHPESLKLLD---TQSAIEFLGAGLSKDNLAYAVICL 131
ES HIFF C A W +DL H L L T +FL LS A + L
Sbjct: 244 ESHMHIFFVCSKAMECWGRIDLGHHVRELLLRTSEFTTLLFDFLDR-LSFIQQQLAAMLL 303
Query: 132 WSIWIDRN-KVNFNEVVPPVNVRIEWIRQYLEGVLKSNDMESHKHVEYDSCSTVAPVRWI 191
WSIW R+ K+ + P + E +H+ + + W+
Sbjct: 304 WSIWKSRDLKLWESSSTSPTLIVTRAKETLHEWSCMQRIKPQVQHLAHTN-------TWV 363
Query: 192 APWPGFLKLNVDASCSPLAPKLGFGLIFRDHMGLCKFASSIFKPVFCDILSAEALALLEG 251
P G +K NVD + GFG+ FRD +G F S P F +L AEA+ALL+
Sbjct: 364 KPTIGVIKCNVDVTTFNNNTMAGFGMCFRDSLGQFIFGKSAHLPSFGFVLEAEAVALLQS 423
Query: 252 LKVADNLGFHNLIIESDSKTLVDAILGNRLSLSPQGIILDEIRLLL 294
+ A ++G H++I E+D+KTL +AI + G I+ + R+LL
Sbjct: 424 IHTAISIGLHSVIFETDNKTLANAINSTSAHNNEFGDIVTQCRVLL 458
BLAST of Sed0019957 vs. ExPASy TrEMBL
Match:
A0A803P4U9 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 137.1 bits (344), Expect = 1.2e-28
Identity = 82/273 (30.04%), Postives = 132/273 (48.35%), Query Frame = 0
Query: 24 KCLWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGNFYESFFHIFFECPC 83
K +W ++ K+K+F+WR++H ++P L KR + + C C + E H + P
Sbjct: 1524 KVVWGSRLTPKMKIFIWRVFHHWIPVKTELTKRGMSMNLTCNRCKSQVEDVCHALWNIPK 1583
Query: 84 ANALWKALDLSFH-PESLKLLDTQSAIEFLGAGLSKDNLAYAVICLWSIWIDRNKVNFNE 143
+ +WK H P SLK A +FL K + + + W IW RNK F
Sbjct: 1584 LHKVWKHFGFLHHFPSSLK-----QAPDFLMLMKGKLSEEFFIGITWLIWYQRNKCVFQN 1643
Query: 144 VVPPVNVRIEWIRQYLEGVLKSNDMESHKHVEYDSCSTVAPVRWIAPWPGFLKLNVDASC 203
++ I W + +E L S SH+++ D+ V+W P PG +N DAS
Sbjct: 1644 KDIEDDIWIPWATEMMEIHLASAQTNSHQNISKDT------VKWSPPPPGTFMINTDASL 1703
Query: 204 SPLAPKLGFGLIFRDHMGLCKFASSIFKPVFCDILSAEALALLEGLKVADNLGFHNLIIE 263
P G G+I RDH+G A++ F P +L AEA+A+ LK+A+ N+ I
Sbjct: 1704 IEGQPGCGLGVIIRDHLGALVTATTEFIPGCLSVLLAEAMAIRLALKLAETRLMQNIFIA 1763
Query: 264 SDSKTLVDAILGNRLSLSPQGIILDEIRLLLKK 296
SDS+++++A+ G + G ++D+ KK
Sbjct: 1764 SDSQSVINALKGKTHINTDWGFVIDDCIQASKK 1785
BLAST of Sed0019957 vs. ExPASy TrEMBL
Match:
A0A7J6GGV5 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_001227 PE=4 SV=1)
HSP 1 Score: 137.1 bits (344), Expect = 1.2e-28
Identity = 82/273 (30.04%), Postives = 132/273 (48.35%), Query Frame = 0
Query: 24 KCLWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGNFYESFFHIFFECPC 83
K +W ++ K+K+F+WR++H ++P L KR + + C C + E H + P
Sbjct: 444 KVVWGSRLTPKMKIFIWRVFHHWIPVKTELTKRGMSMNLTCNRCKSQVEDVCHALWNIPK 503
Query: 84 ANALWKALDLSFH-PESLKLLDTQSAIEFLGAGLSKDNLAYAVICLWSIWIDRNKVNFNE 143
+ +WK H P SLK A +FL K + + + W IW RNK F
Sbjct: 504 LHKVWKHFGFLHHFPSSLK-----QAPDFLMLMKGKLSEEFFIGITWLIWYQRNKCVFQN 563
Query: 144 VVPPVNVRIEWIRQYLEGVLKSNDMESHKHVEYDSCSTVAPVRWIAPWPGFLKLNVDASC 203
++ I W + +E L S SH+++ D+ V+W P PG +N DAS
Sbjct: 564 KDIEDDIWIPWATEMMEIHLASAQTNSHQNISKDT------VKWSPPPPGTFMINTDASL 623
Query: 204 SPLAPKLGFGLIFRDHMGLCKFASSIFKPVFCDILSAEALALLEGLKVADNLGFHNLIIE 263
P G G+I RDH+G A++ F P +L AEA+A+ LK+A+ N+ I
Sbjct: 624 IEGQPGCGLGVIIRDHLGALVTATTEFIPGCLSVLLAEAMAIRLALKLAETRLMQNIFIA 683
Query: 264 SDSKTLVDAILGNRLSLSPQGIILDEIRLLLKK 296
SDS+++++A+ G + G ++D+ KK
Sbjct: 684 SDSQSVINALKGKTHINTDWGFVIDDCIQASKK 705
BLAST of Sed0019957 vs. ExPASy TrEMBL
Match:
A0A803QI38 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 134.8 bits (338), Expect = 5.9e-28
Identity = 92/276 (33.33%), Postives = 131/276 (47.46%), Query Frame = 0
Query: 24 KCLWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGNFYESFFHIFFECPC 83
K LWNL V K+K F WR+YH LP L L RK QP C C N E+ H +CP
Sbjct: 1455 KTLWNLNVQPKIKNFAWRVYHHILPVGLNLFVRKTISQPTCSFCPNPTETVTHALLDCPR 1514
Query: 84 ANALWKALDLSFHPESLKLLDTQSAIEFLGAGLSKDNLAYAVICLWSIWIDRNKVNFNEV 143
A+ +WKA L S + +D + + L KD L V LW+IW RNK F +
Sbjct: 1515 ASKIWKASPLRSFYLSNRHVDVKEFMIIGFEQLHKDQLVLLVTTLWAIWYSRNKKLFANL 1574
Query: 144 VPPVNVRIEWIRQYLEGVLKSNDMES-HKHVEYDSCSTVAPVRWIAPWPGFLKLNVDASC 203
N I WI Y+ + M++ + V S P + P +L L DA+
Sbjct: 1575 DLTPNDTIAWIDSYISDYNAAMAMKNRYSGVLNFPASDRTPK--VVPQNQYL-LQTDAAI 1634
Query: 204 SPLAPKLGFGLIFRDHMGLCKFASSIFKPVFCDI--LSAEALALLEGLKVADNLGFHNLI 263
+ K+GFG + D G K + + PV ++ L AEAL+L L+ N+ +
Sbjct: 1635 NQTQSKMGFGAVLLDWQG--KVVAGLSAPVAGNLQPLIAEALSLRASLEWCINIQMPLAV 1694
Query: 264 IESDSKTLVDAILGNRLSLSPQGIILDEIRLLLKKY 297
IE+DSK LVD +L + S ++++IR L +
Sbjct: 1695 IETDSKLLVDKVLSKKADFSALADVVEDIRCSLSAF 1725
BLAST of Sed0019957 vs. ExPASy TrEMBL
Match:
A0A803PV88 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 132.9 bits (333), Expect = 2.2e-27
Identity = 90/275 (32.73%), Postives = 131/275 (47.64%), Query Frame = 0
Query: 24 KCLWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGNFYESFFHIFFECPC 83
K WNL +P K+K F WR+YH LP L L +RK QP C C N E+ H +C
Sbjct: 846 KTFWNLNLPPKVKNFSWRVYHHILPVALNLFRRKTIPQPHCSFCKNPVETVTHALLDCSR 905
Query: 84 ANALWKALDLSFHPESLKLLDTQSAIEFLGAG---LSKDNLAYAVICLWSIWIDRNKVNF 143
A +WKA S + +D + EF+ G L+KD+L+ + +W+IW RNK F
Sbjct: 906 AAKIWKASPFRTFYLSNRYVDVK---EFMLNGFDQLNKDSLSLLLSIMWAIWNSRNKKLF 965
Query: 144 -NEVVPPVNVRIEW----IRQYLEGVLKSNDMESHKHVEYDSCSTVAPVRWIAPWPGFLK 203
N + P ++ + W I Y E + N +S + ++ + PV +
Sbjct: 966 ANSDMAPTDI-VAWTHTFISDYQEALSNVNRYKSARILQRNDIDVTVPV-------NSYR 1025
Query: 204 LNVDASCSPLAPKLGFGLIFRDHMGLCKFASSIFKPVFCDILSAEALALLEGLKVADNLG 263
LN DA+ S KLG G + +D G +I AEALAL GL ++
Sbjct: 1026 LNTDAALSTERSKLGIGAVVKDWKGCVVANLAIPAAGALQSTLAEALALKAGLNWCQHIK 1085
Query: 264 FHNLIIESDSKTLVDAILGNRLSLSPQGIILDEIR 291
++E+DSK LVD +LG + LS I+ +IR
Sbjct: 1086 IPLALVETDSKLLVDKVLGGKNDLSALSDIVTDIR 1109
BLAST of Sed0019957 vs. TAIR 10
Match:
AT3G09510.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 87.8 bits (216), Expect = 1.6e-17
Identity = 71/258 (27.52%), Postives = 103/258 (39.92%), Query Frame = 0
Query: 23 KKCLWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGNFYESFFHIFFECP 82
K +WNL + KLK F+WR + L T L R + + P C C ES H F CP
Sbjct: 159 KTRIWNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCP 218
Query: 83 CANALWKALDLSFHPESLKLLDTQSAIEFL-----GAGLSKDNLAYAVICLWSIWIDRNK 142
A W+ D S L D + I + +S + V +W IW RN
Sbjct: 219 FATMAWRLSDSSLIRNQLMSNDFEENISNILNFVQDTTMSDFHKLLPVWLIWRIWKARNN 278
Query: 143 VNFNEVVPPVNVRIEWIRQYLEGVLKSNDMESHKHVEYDSCSTVA-PVRWIAPWPGFLKL 202
V FN+ + + + L N +SHK + + W P ++K
Sbjct: 279 VVFNKFRESPSKTVLSAKAETHDWL--NATQSHKKTPSPTRQIAENKIEWRNPPATYVKC 338
Query: 203 NVDASCSPLAPKLGFGLIFRDHMGLCKFASSIFKPVFCDILSAEALALLEGLKVADNLGF 262
N DA + G I R+H G S+ + L AE ALL L+ G+
Sbjct: 339 NFDAGFDVQKLEATGGWIIRNHYGTPISWGSMKLAHTSNPLEAETKALLAALQQTWIRGY 398
Query: 263 HNLIIESDSKTLVDAILG 275
+ +E D +TL++ I G
Sbjct: 399 TQVFMEGDCQTLINLING 414
BLAST of Sed0019957 vs. TAIR 10
Match:
AT3G25270.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 85.9 bits (211), Expect = 6.0e-17
Identity = 61/264 (23.11%), Postives = 110/264 (41.67%), Query Frame = 0
Query: 23 KKCLWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGNFYESFFHIFFECP 82
K +W LK K+K F+W+L L T L++R + P C C E+ H+FF+C
Sbjct: 15 KAKIWKLKTAPKIKHFLWKLLSGALATGDNLKRRHIRNHPQCHRCCQEDETSQHLFFDCF 74
Query: 83 CANALWKALDLSFHPESLKLLDTQSAIEFL----GAGLSKDNLAYAVICLWSIWIDRNKV 142
A +W+A + + ++ +E L A A+ LW +W RN++
Sbjct: 75 YAQQVWRASGIPHQELRTTGITMETKMELLLSSCLANRQPQLFNLAIWILWRLWKSRNQL 134
Query: 143 NFNEVVPPVNVRIEWIRQYLEGVLKSN----DMESHKHVEYDSCSTVAPVRWIAPWPGFL 202
F + ++ R ++ +N + H T+A +W P ++
Sbjct: 135 VFQQKSISWQNTLQRARNDVQEWEDTNTYVQSLNQQVHSSRHQQPTMARTKWQRPPSTWI 194
Query: 203 KLNVDASCSPLAPKLGFGLIFRDHMGLCKFASSIFKPVFCDILSAEALALLEGLKVADNL 262
K N D + + G + RD G+ + D L +E AL+ ++ A +
Sbjct: 195 KYNYDGAFNHQTRNAKAGWLMRDENGVYMGSGQAIGSTTSDSLESEFQALIIAMQHAWSQ 254
Query: 263 GFHNLIIESDSKTLVDAILGNRLS 279
G+ +I E DSK + + + +L+
Sbjct: 255 GYRKVIFEGDSKQVEELMNNEKLN 278
BLAST of Sed0019957 vs. TAIR 10
Match:
AT1G10000.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 56.2 bits (134), Expect = 5.1e-08
Identity = 78/284 (27.46%), Postives = 120/284 (42.25%), Query Frame = 0
Query: 34 KLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGNFYESFFHIFFECPCANALWK--AL 93
K+KLF+W+ LP L +R + C CG E+ H+ F C A +W L
Sbjct: 3 KIKLFLWKAAAGALPVGAQLVRRHISSTWDCARCG-APETSTHMLFHCDFAAQVWNLAPL 62
Query: 94 DLSFHP------ESLKLLDTQSAIEFLGAGLSKDNLAYAVICLWSIWIDRNKVNFNEVVP 153
L P E+L LL + I G+ L + IC W IW RN++ F
Sbjct: 63 QLGHIPIGTPILEALNLL--KKTIVLPPVGIHTATL-FPWIC-WHIWKARNQLIFQNSHF 122
Query: 154 PVNVRIEWIRQYLEGVLKSNDMESHKHVEYDSCSTVAP-VRWIAPWPG--------FLKL 213
V IE + + ++ L + S P VR P P FL
Sbjct: 123 SV---IETVTKAVQDAL-----------AWQSAQLALPKVRVATPRPNSTTTLTHDFL-C 182
Query: 214 NVDASCSPLAPKLGFGLIFR----DHMGLCKFASSIFKPVFCDILSAEALALLEGLKVAD 273
VDA+ + G G +F+ + F++ + F L+AEA A+ + A
Sbjct: 183 YVDAAWQQQSSLAGSGWVFQATSHSEKEITTFSAGCRR--FPSPLAAEAWAIKSAMLHAL 242
Query: 274 NLGFHNLIIESDSKTLVDAILGNRLSLSPQGIILDEIRLLLKKY 297
L +L++ SDSK++VDA L + +SL+ +L EIR + ++
Sbjct: 243 QLERSDLLVLSDSKSIVDA-LNSNVSLNEIFGLLVEIRSIRNRF 263
BLAST of Sed0019957 vs. TAIR 10
Match:
AT3G26855.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )
HSP 1 Score: 54.7 bits (130), Expect = 1.5e-07
Identity = 22/59 (37.29%), Postives = 35/59 (59.32%), Query Frame = 0
Query: 26 LWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGNFYESFFHIFFECPCA 85
+W+LK+ K+KL +W+ + LP L R + ++P+C C +F E+ HI F CP A
Sbjct: 9 IWSLKISPKIKLLIWKALNNALPVGAQLLSRNISIEPFCTRCRDF-ETITHILFNCPFA 66
BLAST of Sed0019957 vs. TAIR 10
Match:
AT5G18880.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )
HSP 1 Score: 42.4 bits (98), Expect = 7.6e-04
Identity = 22/74 (29.73%), Postives = 35/74 (47.30%), Query Frame = 0
Query: 24 KCLWNLKVPNKLKLFMWRLYHEFLPTNLVLQKRKVPVQPWCVMCGNFYESFFHIFFECPC 83
K +W + + L W + E LPT L+ + + V+C N E+ H+FFEC
Sbjct: 129 KVVWFKEYIPRFSLITWMSFLERLPTRDRLRGWGMNIPSSWVLCSNGDETHAHLFFECSF 188
Query: 84 ANALWKALDLSFHP 98
+ A+W+ F P
Sbjct: 189 SLAIWEFFASKFRP 202
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
MCH79484.1 | 2.0e-30 | 33.92 | RNA-directed DNA polymerase (Reverse transcriptase) [Trifolium medium] | [more] |
XP_031094430.1 | 1.4e-28 | 30.69 | uncharacterized protein LOC115998901 [Ipomoea triloba] | [more] |
KAF4382082.1 | 2.4e-28 | 30.04 | hypothetical protein F8388_001227 [Cannabis sativa] | [more] |
XP_019163602.1 | 4.6e-27 | 30.74 | PREDICTED: uncharacterized protein LOC109159944 [Ipomoea nil] | [more] |
XP_024190234.1 | 7.9e-27 | 31.54 | uncharacterized protein LOC112194221 [Rosa chinensis] | [more] |
Match Name | E-value | Identity | Description | |
P0C2F6 | 8.5e-08 | 21.57 | Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... | [more] |
Match Name | E-value | Identity | Description | |
A0A392LXW3 | 9.7e-31 | 33.92 | RNA-directed DNA polymerase (Reverse transcriptase) OS=Trifolium medium OX=97028... | [more] |
A0A803P4U9 | 1.2e-28 | 30.04 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A7J6GGV5 | 1.2e-28 | 30.04 | Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_001227 PE=4 SV=1 | [more] |
A0A803QI38 | 5.9e-28 | 33.33 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803PV88 | 2.2e-27 | 32.73 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT3G09510.1 | 1.6e-17 | 27.52 | Ribonuclease H-like superfamily protein | [more] |
AT3G25270.1 | 6.0e-17 | 23.11 | Ribonuclease H-like superfamily protein | [more] |
AT1G10000.1 | 5.1e-08 | 27.46 | Ribonuclease H-like superfamily protein | [more] |
AT3G26855.1 | 1.5e-07 | 37.29 | RNA-directed DNA polymerase (reverse transcriptase)-related family protein | [more] |
AT5G18880.1 | 7.6e-04 | 29.73 | RNA-directed DNA polymerase (reverse transcriptase)-related family protein | [more] |