Sed0019940 (gene) Chayote v1

Overview


Name	Sed0019940
Type	gene
Organism	Sechium edule (Chayote v1)
Description	ethylene-responsive transcription factor ERF118-like
Location	LG02: 50733656 .. 50734408 (-)
RNA-Seq Expression	Sed0019940
Synteny	Sed0019940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAGCCTCGAAAATGATGAACCCTACCATTCAAAAAAAGTTGTAAAAGAAATCGAAATTGAGTCCAAATACCTTCGAAGAAGAACAGAAAATGAGTCGAAAAATCCGCGTAATCTGCAACGATCCAGATGGAACGGATTCATCTTCCAGCGAAAACGAAAGAGACGAATCAAAATCGAAGCGCATAATTCGCGAAATTCAATTCCCCAATTTTCCTTCCGAATCGTCTCAGAGCTCTTCTCGGGACAGCAACAATGGCGGAAAAAGGAAGATTAGGGTTTTGGCGAAAACCCCAATAACGGAGAGACGATTCAGAGGCGTGAGGCAGAGGAAATGGGGGAAATGGGCTGCTGAAATTCGAGATCCCTTCAAACGAGCTCGAATTTGGCTTGGAACTTACAATACTGCCGAGGAAGCTTCTAGGGCTTACGAATCGAAGCGGCTCGAGTTCCAAACCGCCATGGCCGCCGCCCTCAAACCTCCGGAAGCTTCTCATCTGCTGGGTTTCTGAACGGACCATCTTCGCCGGACGGCGGAGTTCAGTTCCGGCGACGGGAGGATGATACTTTTCCTTTTGGAATGCCATGTCAGCTTCTTTTGCCTAGTCGTTTGCCATGTCAACTTATTCTAAAGCTGGTACTTGCCACATCAGCTTACTGTAAAGCTTAGTCAGCTTCAGTTGGCACCGTTTTTTTTTCTTTTTTTTTTTCCCTCTCGTATTTGTGAATAAAATTCAAATCTAATTGGGCTGCCC

mRNA sequence

GGAGCCTCGAAAATGATGAACCCTACCATTCAAAAAAAGTTGTAAAAGAAATCGAAATTGAGTCCAAATACCTTCGAAGAAGAACAGAAAATGAGTCGAAAAATCCGCGTAATCTGCAACGATCCAGATGGAACGGATTCATCTTCCAGCGAAAACGAAAGAGACGAATCAAAATCGAAGCGCATAATTCGCGAAATTCAATTCCCCAATTTTCCTTCCGAATCGTCTCAGAGCTCTTCTCGGGACAGCAACAATGGCGGAAAAAGGAAGATTAGGGTTTTGGCGAAAACCCCAATAACGGAGAGACGATTCAGAGGCGTGAGGCAGAGGAAATGGGGGAAATGGGCTGCTGAAATTCGAGATCCCTTCAAACGAGCTCGAATTTGGCTTGGAACTTACAATACTGCCGAGGAAGCTTCTAGGGCTTACGAATCGAAGCGGCTCGAGTTCCAAACCGCCATGGCCGCCGCCCTCAAACCTCCGGAAGCTTCTCATCTGCTGGGTTTCTGAACGGACCATCTTCGCCGGACGGCGGAGTTCAGTTCCGGCGACGGGAGGATGATACTTTTCCTTTTGGAATGCCATGTCAGCTTCTTTTGCCTAGTCGTTTGCCATGTCAACTTATTCTAAAGCTGGTACTTGCCACATCAGCTTACTGTAAAGCTTAGTCAGCTTCAGTTGGCACCGTTTTTTTTTCTTTTTTTTTTTCCCTCTCGTATTTGTGAATAAAATTCAAATCTAATTGGGCTGCCC

Coding sequence (CDS)

ATGAGTCGAAAAATCCGCGTAATCTGCAACGATCCAGATGGAACGGATTCATCTTCCAGCGAAAACGAAAGAGACGAATCAAAATCGAAGCGCATAATTCGCGAAATTCAATTCCCCAATTTTCCTTCCGAATCGTCTCAGAGCTCTTCTCGGGACAGCAACAATGGCGGAAAAAGGAAGATTAGGGTTTTGGCGAAAACCCCAATAACGGAGAGACGATTCAGAGGCGTGAGGCAGAGGAAATGGGGGAAATGGGCTGCTGAAATTCGAGATCCCTTCAAACGAGCTCGAATTTGGCTTGGAACTTACAATACTGCCGAGGAAGCTTCTAGGGCTTACGAATCGAAGCGGCTCGAGTTCCAAACCGCCATGGCCGCCGCCCTCAAACCTCCGGAAGCTTCTCATCTGCTGGGTTTCTGA

Protein sequence

MSRKIRVICNDPDGTDSSSSENERDESKSKRIIREIQFPNFPSESSQSSSRDSNNGGKRKIRVLAKTPITERRFRGVRQRKWGKWAAEIRDPFKRARIWLGTYNTAEEASRAYESKRLEFQTAMAAALKPPEASHLLGF

Homology

[Close]

BLAST of Sed0019940 vs. NCBI nr
Match: XP_022980438.1 (ethylene-responsive transcription factor ERF118-like [Cucurbita maxima])

HSP 1 Score: 206.8 bits (525), Expect = 1.2e-49
Identity = 120/160 (75.00%), Postives = 129/160 (80.62%), Query Frame = 0


Query: 1   MSRKIRVICNDPDGTDSSSSENERDES---KSKRIIREIQFPNFPS--------ESSQSS 60
           MSRK+RVICNDPDGTDSSSSENERDE+   KSKRI+REI FP FPS        E+SQSS
Sbjct: 1   MSRKLRVICNDPDGTDSSSSENERDEAKSLKSKRIVREIHFPVFPSRSSKSIDDEASQSS 60

Query: 61  SRDSNNGGK----RKIRVLAKTPITER---RFRGVRQRKWGKWAAEIRDPFKRARIWLGT 120
           +R  +NGGK    R IRVL+KT  TER   R+RGVRQRKWGKWAAEIRDPFKRARIWLGT
Sbjct: 61  ARGGSNGGKAHQRRNIRVLSKTLPTERTACRYRGVRQRKWGKWAAEIRDPFKRARIWLGT 120

Query: 121 YNTAEEASRAYESKRLEFQTAMAAALKPP---EASHLLGF 140
           YNTAEEASRAYESKRLEFQ AMAAA K P   +ASHLLGF
Sbjct: 121 YNTAEEASRAYESKRLEFQAAMAAAPKAPPRFKASHLLGF 160

[Close]

BLAST of Sed0019940 vs. NCBI nr
Match: KAG7018844.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 206.1 bits (523), Expect = 2.0e-49
Identity = 120/160 (75.00%), Postives = 128/160 (80.00%), Query Frame = 0


Query: 1   MSRKIRVICNDPDGTDSSSSENERDE---SKSKRIIREIQFPNFPS--------ESSQSS 60
           MSRK+RVICNDPDGTDSSSSENERDE   SKSKRI+REI FP FPS        E+SQSS
Sbjct: 1   MSRKLRVICNDPDGTDSSSSENERDEAKSSKSKRIVREIHFPVFPSRSSKSIDDEASQSS 60

Query: 61  SRDSNNGGK----RKIRVLAKTPITER---RFRGVRQRKWGKWAAEIRDPFKRARIWLGT 120
           +R  +NGGK    R IRVL+KT  T R   R+RGVRQRKWGKWAAEIRDPFKRARIWLGT
Sbjct: 61  ARGGSNGGKAHQRRNIRVLSKTLPTGRTACRYRGVRQRKWGKWAAEIRDPFKRARIWLGT 120

Query: 121 YNTAEEASRAYESKRLEFQTAMAAALKPP---EASHLLGF 140
           YNTAEEASRAYESKRLEFQ AMAAA K P   +ASHLLGF
Sbjct: 121 YNTAEEASRAYESKRLEFQAAMAAATKAPPRFKASHLLGF 160

[Close]

BLAST of Sed0019940 vs. NCBI nr
Match: XP_022924585.1 (ethylene-responsive transcription factor ERF118-like [Cucurbita moschata] >XP_023528036.1 ethylene-responsive transcription factor ERF118-like [Cucurbita pepo subsp. pepo] >KAG6582451.1 Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 205.3 bits (521), Expect = 3.4e-49
Identity = 120/160 (75.00%), Postives = 128/160 (80.00%), Query Frame = 0


Query: 1   MSRKIRVICNDPDGTDSSSSENERDE---SKSKRIIREIQFPNFPS--------ESSQSS 60
           MSRK+RVICNDPDGTDSSSSENERDE   SKSKRI+REI FP FPS        E+SQSS
Sbjct: 1   MSRKLRVICNDPDGTDSSSSENERDEAKSSKSKRIVREIHFPVFPSRSSKSIDDEASQSS 60

Query: 61  SRDSNNGGK----RKIRVLAKTPITER---RFRGVRQRKWGKWAAEIRDPFKRARIWLGT 120
           +R  +NGGK    R IRVL+KT  T R   R+RGVRQRKWGKWAAEIRDPFKRARIWLGT
Sbjct: 61  ARGGSNGGKAHQRRNIRVLSKTLPTGRTACRYRGVRQRKWGKWAAEIRDPFKRARIWLGT 120

Query: 121 YNTAEEASRAYESKRLEFQTAMAAALKPP---EASHLLGF 140
           YNTAEEASRAYESKRLEFQ AMAAA K P   +ASHLLGF
Sbjct: 121 YNTAEEASRAYESKRLEFQAAMAAAPKAPPRFKASHLLGF 160

[Close]

BLAST of Sed0019940 vs. NCBI nr
Match: XP_038877041.1 (ethylene-responsive transcription factor ERF118-like [Benincasa hispida])

HSP 1 Score: 203.4 bits (516), Expect = 1.3e-48
Identity = 120/162 (74.07%), Postives = 126/162 (77.78%), Query Frame = 0


Query: 1   MSRKIRVICNDPDGTDSSSSENERDE---SKSKRIIREIQFPNFPS----------ESSQ 60
           MSRKIRVICNDPDGTDSSSSENERDE   SKSKRI+REI FP FPS          ES Q
Sbjct: 1   MSRKIRVICNDPDGTDSSSSENERDETKSSKSKRIVREIHFPVFPSHSSSSKSIHDESPQ 60

Query: 61  SSSRDSNNGGK----RKIRVLAKTPITER---RFRGVRQRKWGKWAAEIRDPFKRARIWL 120
           SSS DSNNGG+    R IRVL KT  T R   R+RGVRQRKWGKWAAEIRDPFKRARIWL
Sbjct: 61  SSSLDSNNGGETQQPRNIRVLTKTLTTGRTACRYRGVRQRKWGKWAAEIRDPFKRARIWL 120

Query: 121 GTYNTAEEASRAYESKRLEFQTAMAAALKPP---EASHLLGF 140
           GTYNTAEEASRAYESKRLEFQ+AMA + K P   +ASHLL F
Sbjct: 121 GTYNTAEEASRAYESKRLEFQSAMATSPKAPPRFKASHLLSF 162

[Close]

BLAST of Sed0019940 vs. NCBI nr
Match: KAA0049170.1 (ethylene-responsive transcription factor ERF118-like protein [Cucumis melo var. makuwa] >TYK17390.1 ethylene-responsive transcription factor ERF118-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 196.4 bits (498), Expect = 1.6e-46
Identity = 114/164 (69.51%), Postives = 125/164 (76.22%), Query Frame = 0


Query: 1   MSRKIRVICNDPDGTDSSSSENERDE---SKSKRIIREIQFPNFPS------------ES 60
           MSRKIRVICNDPDGTDSSSSENERDE   SKSKRI+REI FP FPS            E+
Sbjct: 1   MSRKIRVICNDPDGTDSSSSENERDESNSSKSKRIVREIHFPLFPSSNSTSNSSIHDEET 60

Query: 61  SQSSSRDSNNGGK----RKIRVLAKTPITER---RFRGVRQRKWGKWAAEIRDPFKRARI 120
           S +SS  +NNGGK      IRVL KT   ER   R+RGVRQRKWG+WAAEIRDPFKRAR+
Sbjct: 61  SHTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV 120

Query: 121 WLGTYNTAEEASRAYESKRLEFQTAMAAALKPP---EASHLLGF 140
           WLGTYNTAEEASRAYESKRLEFQ+AMAAA K P   + SH+LG+
Sbjct: 121 WLGTYNTAEEASRAYESKRLEFQSAMAAAPKSPTRFKGSHVLGY 164

[Close]

BLAST of Sed0019940 vs. ExPASy Swiss-Prot
Match: Q9CA27 (Ethylene-responsive transcription factor ERF118 OS=Arabidopsis thaliana OX=3702 GN=ERF118 PE=1 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.1e-25
Identity = 66/129 (51.16%), Postives = 86/129 (66.67%), Query Frame = 0


Query: 3   RKIRVICNDPDGTDSSSSENER----DESKSKRIIREIQFPNF--PSESSQSSSRDSNNG 62
           RK+R+I NDP  TD SSS+ E        K KRI+REI FP+     + S+SSS+DS   
Sbjct: 37  RKVRIIVNDPYATDDSSSDEEELKVPKPRKMKRIVREINFPSMEVSEQPSESSSQDSTK- 96

Query: 63  GKRKIRVLAKTPITERRFRGVRQRKWGKWAAEIRDPFKRARIWLGTYNTAEEASRAYESK 122
              KI V A   +  ++  GVRQRKWGKWAAEIRDP K+ R WLGT++T EEA++AY++K
Sbjct: 97  TDGKIAVSASPAVPRKKPVGVRQRKWGKWAAEIRDPIKKTRTWLGTFDTLEEAAKAYDAK 156

Query: 123 RLEFQTAMA 126
           +LEF   +A
Sbjct: 157 KLEFDAIVA 164

[Close]

BLAST of Sed0019940 vs. ExPASy Swiss-Prot
Match: Q9LUA2 (Ethylene-responsive transcription factor ERF119 OS=Arabidopsis thaliana OX=3702 GN=ERF119 PE=1 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 3.5e-20
Identity = 61/143 (42.66%), Postives = 78/143 (54.55%), Query Frame = 0


Query: 3   RKIRVICNDPDGTDSSSSENERDESKSKRIIREIQFP----NFPSESSQSSSRDSNNGGK 62
           RK+R + NDP  TD SSSE E    + KR + EI  P       +ES  S  ++SNN G 
Sbjct: 41  RKLRFVVNDPYATDYSSSEEEERSQRRKRYVCEIDLPFAQAATQAESESSYCQESNNNGV 100

Query: 63  RKIR---------------VLAKTPITERRFRGVRQRKWGKWAAEIRDPFKRARIWLGTY 122
            K +               V+ ++  T  +  GVRQRKWGKWAAEIR P  + R WLGTY
Sbjct: 101 SKTKISACSKKVLRSKASPVVGRSSTTVSKPVGVRQRKWGKWAAEIRHPITKVRTWLGTY 160

Query: 123 NTAEEASRAYESKRLEFQTAMAA 127
            T E+A+ AY +K+LEF    AA
Sbjct: 161 ETLEQAADAYATKKLEFDALAAA 183

[Close]

BLAST of Sed0019940 vs. ExPASy Swiss-Prot
Match: Q9SUQ2 (Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana OX=3702 GN=CRF2 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.1e-18
Identity = 54/136 (39.71%), Postives = 77/136 (56.62%), Query Frame = 0


Query: 2   SRKIRVICNDPDGTDSSSSENERDES-------KSKRIIREIQFPNFPSESSQSSSRDSN 61
           +R +R+   DPD TDSSS + E +         + K+ + E+   +    +      +S 
Sbjct: 34  TRILRISVTDPDATDSSSDDEEEEHQRFVSKRRRVKKFVNEVYLDSGAVVTGSCGQMESK 93

Query: 62  NGGKRKIR--------VLAKTPIT-ERRFRGVRQRKWGKWAAEIRDPFKRARIWLGTYNT 121
              KR ++        V A T  T E++FRGVRQR WGKWAAEIRDP KR R+WLGTYNT
Sbjct: 94  KRQKRAVKSESTVSPVVSATTTTTGEKKFRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNT 153

[Close]

BLAST of Sed0019940 vs. ExPASy Swiss-Prot
Match: O82503 (Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana OX=3702 GN=CRF1 PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.8e-16
Identity = 52/136 (38.24%), Postives = 74/136 (54.41%), Query Frame = 0


Query: 1   MSRKIRVICNDPDGTDSSSSENERDE-----SKSKRIIREIQFPNFPSESSQSSSRDSNN 60
           + R +R+   DP  TDSSS E E  +     +K +R+ + ++     S  S         
Sbjct: 9   LPRILRISVTDPYATDSSSDEEEEVDFDALSTKRRRVKKYVKEVVLDSVVSDKEKPMKKK 68

Query: 61  GGKRKIRVLAKTPITERRFRGVRQRKWGKWAAEIRDPFKRARIWLGTYNTAEEASRAYES 120
             KR + V        R+FRGVRQR WGKWAAEIRDP +R R+WLGT++TAEEA+  Y++
Sbjct: 69  RKKRVVTVPVVVTTATRKFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVYDN 128

Query: 121 KRLEFQTAMAAALKPP 132
             ++ +   A    PP
Sbjct: 129 AAIQLRGPNAELNFPP 144

[Close]

BLAST of Sed0019940 vs. ExPASy Swiss-Prot
Match: Q9SUE3 (Ethylene-responsive transcription factor CRF4 OS=Arabidopsis thaliana OX=3702 GN=CRF4 PE=1 SV=2)

HSP 1 Score: 85.9 bits (211), Expect = 4.0e-16
Identity = 55/128 (42.97%), Postives = 78/128 (60.94%), Query Frame = 0


Query: 2   SRKIRVICNDPDGTDSSSSENE--RDESKSKRIIREIQFPNFPSESSQSSSRDSNNGGKR 61
           +R +RV   D D TDSSS E E      + KR+I EI+    PS SS      S    ++
Sbjct: 40  ARLVRVSMTDRDATDSSSDEEEFLFPRRRVKRLINEIRVE--PSSSSTGDVSASPTKDRK 99

Query: 62  KIRV---LAKTPIT---ERRFRGVRQRKWGKWAAEIRDPFKRARIWLGTYNTAEEASRAY 121
           +I V   + K  ++   ++++RGVRQR WGKWAAEIRDP +R RIWLGT+ TAEEA+  Y
Sbjct: 100 RINVDSTVQKPSVSGQNQKKYRGVRQRPWGKWAAEIRDPEQRRRIWLGTFATAEEAAIVY 159

[Close]

BLAST of Sed0019940 vs. ExPASy TrEMBL
Match: A0A6J1IZB1 (ethylene-responsive transcription factor ERF118-like OS=Cucurbita maxima OX=3661 GN=LOC111479806 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 5.7e-50
Identity = 120/160 (75.00%), Postives = 129/160 (80.62%), Query Frame = 0


Query: 1   MSRKIRVICNDPDGTDSSSSENERDES---KSKRIIREIQFPNFPS--------ESSQSS 60
           MSRK+RVICNDPDGTDSSSSENERDE+   KSKRI+REI FP FPS        E+SQSS
Sbjct: 1   MSRKLRVICNDPDGTDSSSSENERDEAKSLKSKRIVREIHFPVFPSRSSKSIDDEASQSS 60

Query: 61  SRDSNNGGK----RKIRVLAKTPITER---RFRGVRQRKWGKWAAEIRDPFKRARIWLGT 120
           +R  +NGGK    R IRVL+KT  TER   R+RGVRQRKWGKWAAEIRDPFKRARIWLGT
Sbjct: 61  ARGGSNGGKAHQRRNIRVLSKTLPTERTACRYRGVRQRKWGKWAAEIRDPFKRARIWLGT 120

Query: 121 YNTAEEASRAYESKRLEFQTAMAAALKPP---EASHLLGF 140
           YNTAEEASRAYESKRLEFQ AMAAA K P   +ASHLLGF
Sbjct: 121 YNTAEEASRAYESKRLEFQAAMAAAPKAPPRFKASHLLGF 160

[Close]

BLAST of Sed0019940 vs. ExPASy TrEMBL
Match: A0A6J1EFF6 (ethylene-responsive transcription factor ERF118-like OS=Cucurbita moschata OX=3662 GN=LOC111432027 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.7e-49
Identity = 120/160 (75.00%), Postives = 128/160 (80.00%), Query Frame = 0


Query: 1   MSRKIRVICNDPDGTDSSSSENERDE---SKSKRIIREIQFPNFPS--------ESSQSS 60
           MSRK+RVICNDPDGTDSSSSENERDE   SKSKRI+REI FP FPS        E+SQSS
Sbjct: 1   MSRKLRVICNDPDGTDSSSSENERDEAKSSKSKRIVREIHFPVFPSRSSKSIDDEASQSS 60

Query: 61  SRDSNNGGK----RKIRVLAKTPITER---RFRGVRQRKWGKWAAEIRDPFKRARIWLGT 120
           +R  +NGGK    R IRVL+KT  T R   R+RGVRQRKWGKWAAEIRDPFKRARIWLGT
Sbjct: 61  ARGGSNGGKAHQRRNIRVLSKTLPTGRTACRYRGVRQRKWGKWAAEIRDPFKRARIWLGT 120

Query: 121 YNTAEEASRAYESKRLEFQTAMAAALKPP---EASHLLGF 140
           YNTAEEASRAYESKRLEFQ AMAAA K P   +ASHLLGF
Sbjct: 121 YNTAEEASRAYESKRLEFQAAMAAAPKAPPRFKASHLLGF 160

[Close]

BLAST of Sed0019940 vs. ExPASy TrEMBL
Match: A0A5A7U186 (Ethylene-responsive transcription factor ERF118-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002500 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 7.7e-47
Identity = 114/164 (69.51%), Postives = 125/164 (76.22%), Query Frame = 0


Query: 1   MSRKIRVICNDPDGTDSSSSENERDE---SKSKRIIREIQFPNFPS------------ES 60
           MSRKIRVICNDPDGTDSSSSENERDE   SKSKRI+REI FP FPS            E+
Sbjct: 1   MSRKIRVICNDPDGTDSSSSENERDESNSSKSKRIVREIHFPLFPSSNSTSNSSIHDEET 60

Query: 61  SQSSSRDSNNGGK----RKIRVLAKTPITER---RFRGVRQRKWGKWAAEIRDPFKRARI 120
           S +SS  +NNGGK      IRVL KT   ER   R+RGVRQRKWG+WAAEIRDPFKRAR+
Sbjct: 61  SHTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV 120

Query: 121 WLGTYNTAEEASRAYESKRLEFQTAMAAALKPP---EASHLLGF 140
           WLGTYNTAEEASRAYESKRLEFQ+AMAAA K P   + SH+LG+
Sbjct: 121 WLGTYNTAEEASRAYESKRLEFQSAMAAAPKSPTRFKGSHVLGY 164

[Close]

BLAST of Sed0019940 vs. ExPASy TrEMBL
Match: A0A0A0L811 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G133130 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.9e-46
Identity = 114/164 (69.51%), Postives = 124/164 (75.61%), Query Frame = 0


Query: 1   MSRKIRVICNDPDGTDSSSSENERDE---SKSKRIIREIQFPNFPS------------ES 60
           MSRKIRVICNDPDGTDSSSSENERDE   SKSKRI+REI FP F S            E+
Sbjct: 50  MSRKIRVICNDPDGTDSSSSENERDESNSSKSKRIVREIHFPLFASSNSSSDSSIHDEET 109

Query: 61  SQSSSRDSNNGGK----RKIRVLAKTPITER---RFRGVRQRKWGKWAAEIRDPFKRARI 120
           S +SS  +NNGGK      IRVL KT   ER   R+RGVRQRKWG+WAAEIRDPFKRAR+
Sbjct: 110 SHTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV 169

Query: 121 WLGTYNTAEEASRAYESKRLEFQTAMAAALKPP---EASHLLGF 140
           WLGTYNTAEEASRAYESKRLEFQ+AMAAA K P   + SHLLG+
Sbjct: 170 WLGTYNTAEEASRAYESKRLEFQSAMAAAPKAPTRFKGSHLLGY 213

[Close]

BLAST of Sed0019940 vs. ExPASy TrEMBL
Match: A0A1S3AYM8 (ethylene-responsive transcription factor ERF118-like OS=Cucumis melo OX=3656 GN=LOC103484175 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 3.8e-46
Identity = 113/164 (68.90%), Postives = 124/164 (75.61%), Query Frame = 0


Query: 1   MSRKIRVICNDPDGTDSSSSENERDE---SKSKRIIREIQFPNFPS------------ES 60
           MSRKIRVICNDPDGTDSSSSENERDE   SKSKRI+REI FP  PS            E+
Sbjct: 1   MSRKIRVICNDPDGTDSSSSENERDESNSSKSKRIVREIHFPLLPSSNSTSNSSIHDEET 60

Query: 61  SQSSSRDSNNGGK----RKIRVLAKTPITER---RFRGVRQRKWGKWAAEIRDPFKRARI 120
           S +SS  +NNGGK      IRVL KT   ER   R+RGVRQRKWG+WAAEIRDPFKRAR+
Sbjct: 61  SHTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV 120

Query: 121 WLGTYNTAEEASRAYESKRLEFQTAMAAALKPP---EASHLLGF 140
           WLGTYNTAEEASRAYESKRLEFQ+AMAAA K P   + SH+LG+
Sbjct: 121 WLGTYNTAEEASRAYESKRLEFQSAMAAAPKSPTRFKGSHVLGY 164

[Close]

BLAST of Sed0019940 vs. TAIR 10
Match: AT1G68550.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 116.7 bits (291), Expect = 1.5e-26
Identity = 66/129 (51.16%), Postives = 86/129 (66.67%), Query Frame = 0


Query: 3   RKIRVICNDPDGTDSSSSENER----DESKSKRIIREIQFPNF--PSESSQSSSRDSNNG 62
           RK+R+I NDP  TD SSS+ E        K KRI+REI FP+     + S+SSS+DS   
Sbjct: 37  RKVRIIVNDPYATDDSSSDEEELKVPKPRKMKRIVREINFPSMEVSEQPSESSSQDSTK- 96

Query: 63  GKRKIRVLAKTPITERRFRGVRQRKWGKWAAEIRDPFKRARIWLGTYNTAEEASRAYESK 122
              KI V A   +  ++  GVRQRKWGKWAAEIRDP K+ R WLGT++T EEA++AY++K
Sbjct: 97  TDGKIAVSASPAVPRKKPVGVRQRKWGKWAAEIRDPIKKTRTWLGTFDTLEEAAKAYDAK 156

Query: 123 RLEFQTAMA 126
           +LEF   +A
Sbjct: 157 KLEFDAIVA 164

[Close]

BLAST of Sed0019940 vs. TAIR 10
Match: AT1G68550.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 116.7 bits (291), Expect = 1.5e-26
Identity = 66/129 (51.16%), Postives = 86/129 (66.67%), Query Frame = 0


Query: 3   RKIRVICNDPDGTDSSSSENER----DESKSKRIIREIQFPNF--PSESSQSSSRDSNNG 62
           RK+R+I NDP  TD SSS+ E        K KRI+REI FP+     + S+SSS+DS   
Sbjct: 37  RKVRIIVNDPYATDDSSSDEEELKVPKPRKMKRIVREINFPSMEVSEQPSESSSQDSTK- 96

Query: 63  GKRKIRVLAKTPITERRFRGVRQRKWGKWAAEIRDPFKRARIWLGTYNTAEEASRAYESK 122
              KI V A   +  ++  GVRQRKWGKWAAEIRDP K+ R WLGT++T EEA++AY++K
Sbjct: 97  TDGKIAVSASPAVPRKKPVGVRQRKWGKWAAEIRDPIKKTRTWLGTFDTLEEAAKAYDAK 156

Query: 123 RLEFQTAMA 126
           +LEF   +A
Sbjct: 157 KLEFDAIVA 164

[Close]

BLAST of Sed0019940 vs. TAIR 10
Match: AT3G25890.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 99.4 bits (246), Expect = 2.5e-21
Identity = 61/143 (42.66%), Postives = 78/143 (54.55%), Query Frame = 0


Query: 3   RKIRVICNDPDGTDSSSSENERDESKSKRIIREIQFP----NFPSESSQSSSRDSNNGGK 62
           RK+R + NDP  TD SSSE E    + KR + EI  P       +ES  S  ++SNN G 
Sbjct: 41  RKLRFVVNDPYATDYSSSEEEERSQRRKRYVCEIDLPFAQAATQAESESSYCQESNNNGV 100

Query: 63  RKIR---------------VLAKTPITERRFRGVRQRKWGKWAAEIRDPFKRARIWLGTY 122
            K +               V+ ++  T  +  GVRQRKWGKWAAEIR P  + R WLGTY
Sbjct: 101 SKTKISACSKKVLRSKASPVVGRSSTTVSKPVGVRQRKWGKWAAEIRHPITKVRTWLGTY 160

Query: 123 NTAEEASRAYESKRLEFQTAMAA 127
            T E+A+ AY +K+LEF    AA
Sbjct: 161 ETLEQAADAYATKKLEFDALAAA 183

[Close]

BLAST of Sed0019940 vs. TAIR 10
Match: AT3G25890.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 99.4 bits (246), Expect = 2.5e-21
Identity = 61/143 (42.66%), Postives = 78/143 (54.55%), Query Frame = 0


Query: 3   RKIRVICNDPDGTDSSSSENERDESKSKRIIREIQFP----NFPSESSQSSSRDSNNGGK 62
           RK+R + NDP  TD SSSE E    + KR + EI  P       +ES  S  ++SNN G 
Sbjct: 41  RKLRFVVNDPYATDYSSSEEEERSQRRKRYVCEIDLPFAQAATQAESESSYCQESNNNGV 100

Query: 63  RKIR---------------VLAKTPITERRFRGVRQRKWGKWAAEIRDPFKRARIWLGTY 122
            K +               V+ ++  T  +  GVRQRKWGKWAAEIR P  + R WLGTY
Sbjct: 101 SKTKISACSKKVLRSKASPVVGRSSTTVSKPVGVRQRKWGKWAAEIRHPITKVRTWLGTY 160

Query: 123 NTAEEASRAYESKRLEFQTAMAA 127
            T E+A+ AY +K+LEF    AA
Sbjct: 161 ETLEQAADAYATKKLEFDALAAA 183

[Close]

BLAST of Sed0019940 vs. TAIR 10
Match: AT4G23750.1 (cytokinin response factor 2 )

HSP 1 Score: 94.4 bits (233), Expect = 7.9e-20
Identity = 54/136 (39.71%), Postives = 77/136 (56.62%), Query Frame = 0


Query: 2   SRKIRVICNDPDGTDSSSSENERDES-------KSKRIIREIQFPNFPSESSQSSSRDSN 61
           +R +R+   DPD TDSSS + E +         + K+ + E+   +    +      +S 
Sbjct: 34  TRILRISVTDPDATDSSSDDEEEEHQRFVSKRRRVKKFVNEVYLDSGAVVTGSCGQMESK 93

Query: 62  NGGKRKIR--------VLAKTPIT-ERRFRGVRQRKWGKWAAEIRDPFKRARIWLGTYNT 121
              KR ++        V A T  T E++FRGVRQR WGKWAAEIRDP KR R+WLGTYNT
Sbjct: 94  KRQKRAVKSESTVSPVVSATTTTTGEKKFRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNT 153

The following BLAST results are available for this feature:

BLAST of Sed0019940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022980438.1	1.2e-49	75.00	ethylene-responsive transcription factor ERF118-like [Cucurbita maxima]	[more]
KAG7018844.1	2.0e-49	75.00	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
XP_022924585.1	3.4e-49	75.00	ethylene-responsive transcription factor ERF118-like [Cucurbita moschata] >XP_02...	[more]
XP_038877041.1	1.3e-48	74.07	ethylene-responsive transcription factor ERF118-like [Benincasa hispida]	[more]
KAA0049170.1	1.6e-46	69.51	ethylene-responsive transcription factor ERF118-like protein [Cucumis melo var. ...	[more]

BLAST of Sed0019940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CA27	2.1e-25	51.16	Ethylene-responsive transcription factor ERF118 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LUA2	3.5e-20	42.66	Ethylene-responsive transcription factor ERF119 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SUQ2	1.1e-18	39.71	Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana OX=3702 GN...	[more]
O82503	1.8e-16	38.24	Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9SUE3	4.0e-16	42.97	Ethylene-responsive transcription factor CRF4 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Sed0019940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IZB1	5.7e-50	75.00	ethylene-responsive transcription factor ERF118-like OS=Cucurbita maxima OX=3661...	[more]
A0A6J1EFF6	1.7e-49	75.00	ethylene-responsive transcription factor ERF118-like OS=Cucurbita moschata OX=36...	[more]
A0A5A7U186	7.7e-47	69.51	Ethylene-responsive transcription factor ERF118-like protein OS=Cucumis melo var...	[more]
A0A0A0L811	2.9e-46	69.51	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G133130 PE=...	[more]
A0A1S3AYM8	3.8e-46	68.90	ethylene-responsive transcription factor ERF118-like OS=Cucumis melo OX=3656 GN=...	[more]

BLAST of Sed0019940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68550.1	1.5e-26	51.16	Integrase-type DNA-binding superfamily protein	[more]
AT1G68550.2	1.5e-26	51.16	Integrase-type DNA-binding superfamily protein	[more]
AT3G25890.1	2.5e-21	42.66	Integrase-type DNA-binding superfamily protein	[more]
AT3G25890.2	2.5e-21	42.66	Integrase-type DNA-binding superfamily protein	[more]
AT4G23750.1	7.9e-20	39.71	cytokinin response factor 2	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 96..112 score: 62.14 coord: 74..85 score: 66.97
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 73..127 e-value: 7.8E-17 score: 71.9
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 73..119 e-value: 7.2E-12 score: 45.4
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 73..131 score: 20.151976
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 73..120 e-value: 9.02633E-22 score: 80.3935
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 72..128 e-value: 5.4E-18 score: 66.9
IPR017392	AP2/ERF transcription factor ERF/PTI6	PIRSF	PIRSF038123	PTI6	coord: 1..132 e-value: 1.4E-33 score: 114.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..54
None	No IPR available	PANTHER	PTHR31190:SF276	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF119-LIKE	coord: 1..126
IPR044808	Ethylene-responsive transcription factor	PANTHER	PTHR31190	DNA-BINDING DOMAIN	coord: 1..126
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 73..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0019940.1	Sed0019940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009873	ethylene-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity