Sed0019930 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTATACTGTTATTTTATACGAGTTCGGAGCAAATTTTAGATTTGGATCCAAATTATAAAATGTATTTTGTAATATATTCAAACCAATAAAATGTTATCAATTATTTACTATTAACATAATGCTATAAAATAAATTTAGAGGTTTAAATGTCATTTTTGTTCTCTAAACTCTTTATTATTATTATTATTATTTTCATTCCTAAACTTTAATTAAAAATGTTTATTTTTCATTTTGGTGTTCTTTAATTTTTAAAATGTCAATGATAGTCTTTAGTTTTTTTTAAACAATAATTTTAGTCCTTGCTGTATTATTTTTCCATCTAGCCTTCAAACTTCACAATAATGTTTGCTCTTGATAGCATACATTCTAAAGTTGTTAAAGTTAAAAGGACCAATATTTTTTAATAGAAAAATTCCAAAGACAAATAAATATTTATACGTTCAAATATAAAATAATAGAATTTATTTTAAAGTTTTTGGATCAAAATGAATATTTTTGATAAATTTAATTAGAGACAGAATGGAACATATAAAAGTCAGATTTTATTTTATACTATTGTATAGGAAATGTTTATTTTTAACCAAATGGAATGAGTTTATTACCTAAGACAGTATTTATTAAAGTTCATATTTTTAGACGGAAAGAGTTAATAACTTAGCGGTTTCATTGTTCTCATATTATTTGAAGGTAGTAGTGTGGCTTATGTAGAGTTTGCTAAAAATTTAGAGAATTTACTATCAGCAGCACATTCTACCTCTTGTATTATATTTGTAGCATAACTTTTAAAATAATTCATCTATAACATATTTATTTCTATCACTCACCTAGTGATAGAACTCAATTTAAATTTCTATCACTGATAGAAAACTTAAGCAGTGATAGAATGAGTCTATCATTTATTGAATTCTATCACTAATAGAACTCAACAAGTGATAGAAGTCAATTTGGATTTTCTGCCACAAATGAAATTATTTTAGATTTTGTGCTATAGATGGAAATATTTTGCCATTTTTTGTTATACATGCAAAATCCCCAAAAATTTATGATATGAACCCATAACCTCTTGGATTATAAATTTTTTTATTTATAGCTACACCATTCCAACCATAATTTTTACTGTTTATAATTGTTGGTGAATAAAATATGTAGAAGTTAGTTATTTATGTGTTAATAATGAAACTATGAGTTAAATGTATGACCAGACAAAAAGAATCACATCATTTACATATATTTAGTTATTACTACATACTTAATTCGTCAGAAATCATGAACAATGAACTACTTTATCAAATTAATAAAGACTAATTAGAAAGAACTGAGTCATACTTGCATGATATATGATTTGTTAATTAAGAAGTTACAAGTTCAAATTCTCCATCCAAAATTTAATGAAATAAAATCATAAAAACTAAGACCCCGTTTGGTAATTATATAGTTTTTTTTCTTCTAAATTTTGGTTTGATTTCTATAAATAAGTAAGATGTAGAAATCCATGTAAAAGAAAATATATGATATGGTAGTTGTCATAGACTTAAATTTTTTTAAAAAAAACAAAAAACAAAATGATTATCAGACCTAAATTATATTCTAACTTTCTCAAAATTAAAGAGACTAAATTCTTGTTCTATAACGAGGTCCAATTAGTTACGAAACAAAGTTAGTATATACCTTTTTATCATCCATCAAACTTCCAAGTTATATATATATATATATATATATTTGGAAATGCAAAGTTCCAAGTTTGTAAGTAGTTAATTCTCAACTCATTTTCATAATCTCCTAAAATTACTATATCTATGTCTTTTGGTAATTTCCATATATATGGCTCTTGAACCTCCCCATCTCATTGGTTTTTTCTTCCTCAAACTCTAAAACCAACAAACACCACTAAAGAAAAAAAGGCAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAAGAAAAGAATTAAAAAGCTAAGGAAAGGGGGTCTCCATCATCTCCAAAGTTAAAGAAAAGGAGATTGCTTTTTGGAGACAAAGTGACAGAGCATCACCAAAACCTATTATTCCTCCAAACACACCCTTCCATGTGCTATTTAACAACATTCTCTTGTTTTTTCCTCCCTACCCTTTTTCACTTTCCCCCCCTAAGATTTCTTTTTCACCCCTTTTCCCCTTGTCCTTTTCCCCCTTCCCCAATTATTCCCCCAAATCTCATCCCCCCTTTTGTAATCATTTACCAATTCAACCAACCCTAAAATATATTACTAATTATTATTATTATTTCAATTTCATTCACATATCACCCGAATCCGACACACTCTACCTCAATCATATATTCCTTTCCCTTTCCCTCTCTCCTATATATACTCCCAACCAAACCCTTTTCCTTTAACAATTTCAAAAAAAAAAAAAACCACACATTATTCCTTAGTATTATTGTTTTGTTTTTGTGTTCTTGTTGTGTTTTTCAATGGGTAGGCATGAATCTAACCATGACCCATCTCTTGTTGTTCATTCCTCTATTGCTCTTCTTCAAGAGAGATTTAGACAACTTCAGAAAGTTAAGGAGATGAGAGAGGAGAGGGAGCTTCTTAGATTGATTTCTCTTTCAAACCCCAAAAAACATGCCTTGTTCAATGCTTGTGTCCTTCTTGACCCTTCCGTTGCACGGTTTTTCCCCCATAACGAGTTGATGACGACGACAACGACGAAGACAACGACAATGTCAAGTTTGCCTCAAACGTCTCTAGCGCTCTGGCCTACATCGCCTAAGCTCGACAGTGACGTGCCACCATTGATGAACTTGTGGCCGATGGATAACACTACTAGTACTACTACTACTACTTCGTCGTCGTGTGATAGCGCCATCTCATTGATTAGTAAACTAGATCATGAGTCAGACTCGGATACCGATGTCGATACTTCTCTTCACTTGTAA ATGTCTATACTGTTATTTTATACGAGTTCGGAGCAAATTTTAGATTTGGATCCAAATTATAAAATAAATCCATGTAAAAGAAAATATATGATATGGCATGAATCTAACCATGACCCATCTCTTGTTGTTCATTCCTCTATTGCTCTTCTTCAAGAGAGATTTAGACAACTTCAGAAAGTTAAGGAGATGAGAGAGGAGAGGGAGCTTCTTAGATTGATTTCTCTTTCAAACCCCAAAAAACATGCCTTGTTCAATGCTTGTGTCCTTCTTGACCCTTCCGTTGCACGGTTTTTCCCCCATAACGAGTTGATGACGACGACAACGACGAAGACAACGACAATGTCAAGTTTGCCTCAAACGTCTCTAGCGCTCTGGCCTACATCGCCTAAGCTCGACAGTGACGTGCCACCATTGATGAACTTGTGGCCGATGGATAACACTACTAGTACTACTACTACTACTTCGTCGTCGTGTGATAGCGCCATCTCATTGATTAGTAAACTAGATCATGAGTCAGACTCGGATACCGATGTCGATACTTCTCTTCACTTGTAA ATGTCTATACTGTTATTTTATACGAGTTCGGAGCAAATTTTAGATTTGGATCCAAATTATAAAATAAATCCATGTAAAAGAAAATATATGATATGGCATGAATCTAACCATGACCCATCTCTTGTTGTTCATTCCTCTATTGCTCTTCTTCAAGAGAGATTTAGACAACTTCAGAAAGTTAAGGAGATGAGAGAGGAGAGGGAGCTTCTTAGATTGATTTCTCTTTCAAACCCCAAAAAACATGCCTTGTTCAATGCTTGTGTCCTTCTTGACCCTTCCGTTGCACGGTTTTTCCCCCATAACGAGTTGATGACGACGACAACGACGAAGACAACGACAATGTCAAGTTTGCCTCAAACGTCTCTAGCGCTCTGGCCTACATCGCCTAAGCTCGACAGTGACGTGCCACCATTGATGAACTTGTGGCCGATGGATAACACTACTAGTACTACTACTACTACTTCGTCGTCGTGTGATAGCGCCATCTCATTGATTAGTAAACTAGATCATGAGTCAGACTCGGATACCGATGTCGATACTTCTCTTCACTTGTAA MSILLFYTSSEQILDLDPNYKINPCKRKYMIWHESNHDPSLVVHSSIALLQERFRQLQKVKEMREERELLRLISLSNPKKHALFNACVLLDPSVARFFPHNELMTTTTTKTTTMSSLPQTSLALWPTSPKLDSDVPPLMNLWPMDNTTSTTTTTSSSCDSAISLISKLDHESDSDTDVDTSLHL Homology
BLAST of Sed0019930 vs. NCBI nr
Match: KAG6594702.1 (hypothetical protein SDJN03_11255, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 193.4 bits (490), Expect = 1.8e-45 Identity = 116/162 (71.60%), Postives = 125/162 (77.16%), Query Frame = 0
BLAST of Sed0019930 vs. NCBI nr
Match: TYK12991.1 (hypothetical protein E5676_scaffold255G005880 [Cucumis melo var. makuwa]) HSP 1 Score: 127.1 bits (318), Expect = 1.6e-25 Identity = 97/196 (49.49%), Postives = 122/196 (62.24%), Query Frame = 0
BLAST of Sed0019930 vs. NCBI nr
Match: KGN49044.1 (hypothetical protein Csa_002770 [Cucumis sativus]) HSP 1 Score: 115.5 bits (288), Expect = 4.7e-22 Identity = 88/198 (44.44%), Postives = 121/198 (61.11%), Query Frame = 0
BLAST of Sed0019930 vs. NCBI nr
Match: XP_003594274.1 (uncharacterized protein LOC11415654 [Medicago truncatula] >AES64525.1 hypothetical protein MTR_2g026510 [Medicago truncatula] >RHN72667.1 hypothetical protein MtrunA17_Chr2g0290261 [Medicago truncatula]) HSP 1 Score: 80.5 bits (197), Expect = 1.7e-11 Identity = 67/158 (42.41%), Postives = 90/158 (56.96%), Query Frame = 0
BLAST of Sed0019930 vs. NCBI nr
Match: XP_027338230.1 (uncharacterized protein LOC113852189 [Abrus precatorius]) HSP 1 Score: 79.0 bits (193), Expect = 4.9e-11 Identity = 67/157 (42.68%), Postives = 85/157 (54.14%), Query Frame = 0
BLAST of Sed0019930 vs. ExPASy TrEMBL
Match: A0A5D3CME5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005880 PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 7.6e-26 Identity = 97/196 (49.49%), Postives = 122/196 (62.24%), Query Frame = 0
BLAST of Sed0019930 vs. ExPASy TrEMBL
Match: A0A0A0KJS5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511110 PE=4 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 2.3e-22 Identity = 88/198 (44.44%), Postives = 121/198 (61.11%), Query Frame = 0
BLAST of Sed0019930 vs. ExPASy TrEMBL
Match: G7IPB5 (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=11415654 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 8.1e-12 Identity = 67/158 (42.41%), Postives = 90/158 (56.96%), Query Frame = 0
BLAST of Sed0019930 vs. ExPASy TrEMBL
Match: A0A6P3ZU56 (uncharacterized protein LOC107415217 OS=Ziziphus jujuba OX=326968 GN=LOC107415217 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 3.1e-11 Identity = 63/161 (39.13%), Postives = 92/161 (57.14%), Query Frame = 0
BLAST of Sed0019930 vs. ExPASy TrEMBL
Match: A0A6A1WA09 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR2G019940 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 4.0e-11 Identity = 69/156 (44.23%), Postives = 88/156 (56.41%), Query Frame = 0
BLAST of Sed0019930 vs. TAIR 10
Match: AT4G16447.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 47.8 bits (112), Expect = 1.1e-05 Identity = 50/145 (34.48%), Postives = 66/145 (45.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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