Sed0019900 (gene) Chayote v1

Overview


Name	Sed0019900
Type	gene
Organism	Sechium edule (Chayote v1)
Description	pentatricopeptide repeat-containing protein PNM1, mitochondrial-like
Location	LG12: 31048727 .. 31051317 (+)
RNA-Seq Expression	Sed0019900
Synteny	Sed0019900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACCAAGTTTTCATTTTCCTTTCACTTCTTCAGAGCTCAATCGTCCGTAACAATGCCGCCATTAACGAATGTTCATCTTCGAAGATTCCTTATTCGATCTCTATCATCTTATTCTTCTTCTTCTTCACCTTCAAGATCTCTGAATGAAGCTACCAGAACTGTCGTTCTACATCGAAATCCGACCTCTGTTTTCCACCATTTCCGTCATCAAGGACCGGCGTTGAGGTTTTCAAATCCATTACAGCTTTCACTTTCTCATTCTTTCTTCTCCGATTCCGGCGAGAATGACGTGGATCAAACATCGCAGTCACTTGCGGCGGAGCTTCTCCGAGATCCGGATTTGGATCCTCTCCCCATTACGGAGCGTCTTCAACTCAGCTTTTCGCATATCAAACCGAATCCGGAGTTGGTGCTCAACACGCTCAATCTCGCATCGGAAGCTGGCCGGACGGTTTTAGGGTTTAACGACTGGTTAGTATCGAATCCTGACTTTAATCATACGGACGAGACTATATCGTATTTTGTCGATTATTTTGGTCGTAGAAAGGATTTCAATTCGATTCATGAAGTTCTTGCTAAGGGTTTAGGGGTTAGTGGGGATAAGACCCTGCAGTCGACTATTGATCGGTTCGCTCGTGCTGGGCGACACACGAAGCTGATATCGTTTTTTGAGACGATGGAGAAGAATTATGGGTTCAAGAGGGATAAGGAATCGCTCAGGATGGTGGTGGAGAAGCTTTGTGAGAATGGCTTTGCTAGCCATGCTGAGAAGGTGGTTAAAGACTTGGCGAATGAGTTTTTCCCTGATGAAGCTATTTGTGATACTCTGATCAAAGGATGGTGCGTTGATGAGAAGCTCGATGAGGCAAAGAGGCTGGCGGGTGAGATGTATAGGGGAGGGTTCGAGCTCGGGACACCGGCCTACAATGCTCTGCTTGACTGTGTTTGCAAGCTCTGTAGAAAGAAGGATCCGTTTAGGCTTCAATCTGAAGCTGAGGTAGTTTTAGTGGAAATGGATTATCGTGGGGTTCCACGGAATGGGGAAACTTTCAATGTGCTGATTAATAATCTGTGCAAGATTAGGAAAACTTCTGAAGCACTAAATTTATTTCATCGAATGGGGGAATGGGGTTGTCTTCCTGATGCTGAAACGTTTGTTATTTTGATTAAAAGTTTGTATCAAGCGGCGAGGACCGGAGAGGGGGATGAAATGATTGACAGGATGAGATCTTCGGGATATGGCGATGCACTTGATAAGAAGGCTTATTACGATTTTCTGAAGATTTTGTGTGGAATCGAGAGGATTGATCATGCTCTGATTGTTTTCGAAAAGATGAAGAATGACGGATGTGAACCTGGAATTAAGACATACGATCTATTGATGGGAAAATTCTGTGCACATAATCGTCTCGACAAAGCGAATTCACTCTATAATGAAGCTCAAAAACGGGGAGTGCCGGTTGTTTCGAAAGTATACAAGGTGGACCCAAGATATGTAGCGAAGCCAAAGGTAAAGAAGGCTGAGAAGAAGAGGGAGACATTGCCAGAGAAAATGGCGAGGAAGAGGAGACGATTGAAGCAAATTCGATTGAGTTTTGTCAAGAAGCCGAAAAAATCAATGCGTCGAGCATATTGATAACTTAATGTAGCATCAGATCTCTTGGAGTTTGCTTCCAAACTTGATGAATTCTTTTCTAGGACGTCCTCTGTTTTCATTTTCATCCGCCCCTCTTGCCTTCATGATAGCTAGCAGTTCAAATAAGATGTTTTTGTTTTTTTTCCTGTTTGTCACTGTGGCTCGAGCTGAAACAAATACAGGACAATGGCAGCTTTGATATGCCATTCCATTATTGGACAAACGAACACTCTCAAGTTTTGGTGGATCGAAATTTCAGGTCTGTTTAGGAAATTGTAACTTATATGAATATTGCACTATTGTTAATTTTCCCCTATTTTGACCATGGTATATTATCTAAATGAATATTGCATGTTCATATTTGACTAACTGAAGCTGATAGTGTGTGTATATATATTTTGATATCCTTGACCGATTGAACCAACTTACGCGCACCTGGACTTTGTCACGGATATGCTGTCTGACCCTACAACATGTAGGTGTAAAGAAATTGATAAGAAATTAATGTTGATAATACATTACTACTCGTTAGGTTCAATCCACTAAAACTTTCCACCCAGTAATTAATTTCTTAGATTTTTTTTTTGTCCTCAAAAGGTGGCACGGTGGTTGAAGATTTAAGCTTTTTAAGGTATGCTTCCTTCAAGATCTCAAGTTCGAGATTCACCTATGACATTATTCCTTTGATGTCTCTCTATGACATTATTCCTTTGATGTCTCTGGTGTCTGACCTAGAGGCAGACGTGGTAATTTGTTTCAAAAAAAAAATCTTAGAATTTTTTTTGATATCCAAATGTTATTTTCTTAGTAATCATTCCTCATAATGTTTTTGTTGAACAAGTTTGATCTTGTGCTCTCCATTCTGCCGATTATTGTTGTTTTACAGGCTTTAAGTGTGGAATGGCTGACCAAATGTGGAATGCTATCTGAAGAGAGCCATTCCAATCAGGCGAG

mRNA sequence

AAACCAAGTTTTCATTTTCCTTTCACTTCTTCAGAGCTCAATCGTCCGTAACAATGCCGCCATTAACGAATGTTCATCTTCGAAGATTCCTTATTCGATCTCTATCATCTTATTCTTCTTCTTCTTCACCTTCAAGATCTCTGAATGAAGCTACCAGAACTGTCGTTCTACATCGAAATCCGACCTCTGTTTTCCACCATTTCCGTCATCAAGGACCGGCGTTGAGGTTTTCAAATCCATTACAGCTTTCACTTTCTCATTCTTTCTTCTCCGATTCCGGCGAGAATGACGTGGATCAAACATCGCAGTCACTTGCGGCGGAGCTTCTCCGAGATCCGGATTTGGATCCTCTCCCCATTACGGAGCGTCTTCAACTCAGCTTTTCGCATATCAAACCGAATCCGGAGTTGGTGCTCAACACGCTCAATCTCGCATCGGAAGCTGGCCGGACGGTTTTAGGGTTTAACGACTGGTTAGTATCGAATCCTGACTTTAATCATACGGACGAGACTATATCGTATTTTGTCGATTATTTTGGTCGTAGAAAGGATTTCAATTCGATTCATGAAGTTCTTGCTAAGGGTTTAGGGGTTAGTGGGGATAAGACCCTGCAGTCGACTATTGATCGGTTCGCTCGTGCTGGGCGACACACGAAGCTGATATCGTTTTTTGAGACGATGGAGAAGAATTATGGGTTCAAGAGGGATAAGGAATCGCTCAGGATGGTGGTGGAGAAGCTTTGTGAGAATGGCTTTGCTAGCCATGCTGAGAAGGTGGTTAAAGACTTGGCGAATGAGTTTTTCCCTGATGAAGCTATTTGTGATACTCTGATCAAAGGATGGTGCGTTGATGAGAAGCTCGATGAGGCAAAGAGGCTGGCGGGTGAGATGTATAGGGGAGGGTTCGAGCTCGGGACACCGGCCTACAATGCTCTGCTTGACTGTGTTTGCAAGCTCTGTAGAAAGAAGGATCCGTTTAGGCTTCAATCTGAAGCTGAGGTAGTTTTAGTGGAAATGGATTATCGTGGGGTTCCACGGAATGGGGAAACTTTCAATGTGCTGATTAATAATCTGTGCAAGATTAGGAAAACTTCTGAAGCACTAAATTTATTTCATCGAATGGGGGAATGGGGTTGTCTTCCTGATGCTGAAACGTTTGTTATTTTGATTAAAAGTTTGTATCAAGCGGCGAGGACCGGAGAGGGGGATGAAATGATTGACAGGATGAGATCTTCGGGATATGGCGATGCACTTGATAAGAAGGCTTATTACGATTTTCTGAAGATTTTGTGTGGAATCGAGAGGATTGATCATGCTCTGATTGTTTTCGAAAAGATGAAGAATGACGGATGTGAACCTGGAATTAAGACATACGATCTATTGATGGGAAAATTCTGTGCACATAATCGTCTCGACAAAGCGAATTCACTCTATAATGAAGCTCAAAAACGGGGAGTGCCGGTTGTTTCGAAAGTATACAAGGTGGACCCAAGATATGTAGCGAAGCCAAAGGTAAAGAAGGCTGAGAAGAAGAGGGAGACATTGCCAGAGAAAATGGCGAGGAAGAGGAGACGATTGAAGCAAATTCGATTGAGTTTTGTCAAGAAGCCGAAAAAATCAATGCGTCGAGCATATTGATAACTTAATGTAGCATCAGATCTCTTGGAGTTTGCTTCCAAACTTGATGAATTCTTTTCTAGGACGTCCTCTGTTTTCATTTTCATCCGCCCCTCTTGCCTTCATGATAGCTAGCAGTTCAAATAAGATGTTTTTGTTTTTTTTCCTGTTTGTCACTGTGGCTCGAGCTGAAACAAATACAGGACAATGGCAGCTTTGATATGCCATTCCATTATTGGACAAACGAACACTCTCAAGTTTTGGTGGATCGAAATTTCAGGTCTGTTTAGGAAATTGTAACTTATATGAATATTGCACTATTGTTAATTTTCCCCTATTTTGACCATGGTATATTATCTAAATGAATATTGCATGTTCATATTTGACTAACTGAAGCTGATAGTGTGTGTATATATATTTTGATATCCTTGACCGATTGAACCAACTTACGCGCACCTGGACTTTGTCACGGATATGCTGTCTGACCCTACAACATGTGGCACGGTGGTTGAAGATTTAAGCTTTTTAAGGCTTTAAGTGTGGAATGGCTGACCAAATGTGGAATGCTATCTGAAGAGAGCCATTCCAATCAGGCGAG

Coding sequence (CDS)

ATGCCGCCATTAACGAATGTTCATCTTCGAAGATTCCTTATTCGATCTCTATCATCTTATTCTTCTTCTTCTTCACCTTCAAGATCTCTGAATGAAGCTACCAGAACTGTCGTTCTACATCGAAATCCGACCTCTGTTTTCCACCATTTCCGTCATCAAGGACCGGCGTTGAGGTTTTCAAATCCATTACAGCTTTCACTTTCTCATTCTTTCTTCTCCGATTCCGGCGAGAATGACGTGGATCAAACATCGCAGTCACTTGCGGCGGAGCTTCTCCGAGATCCGGATTTGGATCCTCTCCCCATTACGGAGCGTCTTCAACTCAGCTTTTCGCATATCAAACCGAATCCGGAGTTGGTGCTCAACACGCTCAATCTCGCATCGGAAGCTGGCCGGACGGTTTTAGGGTTTAACGACTGGTTAGTATCGAATCCTGACTTTAATCATACGGACGAGACTATATCGTATTTTGTCGATTATTTTGGTCGTAGAAAGGATTTCAATTCGATTCATGAAGTTCTTGCTAAGGGTTTAGGGGTTAGTGGGGATAAGACCCTGCAGTCGACTATTGATCGGTTCGCTCGTGCTGGGCGACACACGAAGCTGATATCGTTTTTTGAGACGATGGAGAAGAATTATGGGTTCAAGAGGGATAAGGAATCGCTCAGGATGGTGGTGGAGAAGCTTTGTGAGAATGGCTTTGCTAGCCATGCTGAGAAGGTGGTTAAAGACTTGGCGAATGAGTTTTTCCCTGATGAAGCTATTTGTGATACTCTGATCAAAGGATGGTGCGTTGATGAGAAGCTCGATGAGGCAAAGAGGCTGGCGGGTGAGATGTATAGGGGAGGGTTCGAGCTCGGGACACCGGCCTACAATGCTCTGCTTGACTGTGTTTGCAAGCTCTGTAGAAAGAAGGATCCGTTTAGGCTTCAATCTGAAGCTGAGGTAGTTTTAGTGGAAATGGATTATCGTGGGGTTCCACGGAATGGGGAAACTTTCAATGTGCTGATTAATAATCTGTGCAAGATTAGGAAAACTTCTGAAGCACTAAATTTATTTCATCGAATGGGGGAATGGGGTTGTCTTCCTGATGCTGAAACGTTTGTTATTTTGATTAAAAGTTTGTATCAAGCGGCGAGGACCGGAGAGGGGGATGAAATGATTGACAGGATGAGATCTTCGGGATATGGCGATGCACTTGATAAGAAGGCTTATTACGATTTTCTGAAGATTTTGTGTGGAATCGAGAGGATTGATCATGCTCTGATTGTTTTCGAAAAGATGAAGAATGACGGATGTGAACCTGGAATTAAGACATACGATCTATTGATGGGAAAATTCTGTGCACATAATCGTCTCGACAAAGCGAATTCACTCTATAATGAAGCTCAAAAACGGGGAGTGCCGGTTGTTTCGAAAGTATACAAGGTGGACCCAAGATATGTAGCGAAGCCAAAGGTAAAGAAGGCTGAGAAGAAGAGGGAGACATTGCCAGAGAAAATGGCGAGGAAGAGGAGACGATTGAAGCAAATTCGATTGAGTTTTGTCAAGAAGCCGAAAAAATCAATGCGTCGAGCATATTGA

Protein sequence

MPPLTNVHLRRFLIRSLSSYSSSSSPSRSLNEATRTVVLHRNPTSVFHHFRHQGPALRFSNPLQLSLSHSFFSDSGENDVDQTSQSLAAELLRDPDLDPLPITERLQLSFSHIKPNPELVLNTLNLASEAGRTVLGFNDWLVSNPDFNHTDETISYFVDYFGRRKDFNSIHEVLAKGLGVSGDKTLQSTIDRFARAGRHTKLISFFETMEKNYGFKRDKESLRMVVEKLCENGFASHAEKVVKDLANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTPAYNALLDCVCKLCRKKDPFRLQSEAEVVLVEMDYRGVPRNGETFNVLINNLCKIRKTSEALNLFHRMGEWGCLPDAETFVILIKSLYQAARTGEGDEMIDRMRSSGYGDALDKKAYYDFLKILCGIERIDHALIVFEKMKNDGCEPGIKTYDLLMGKFCAHNRLDKANSLYNEAQKRGVPVVSKVYKVDPRYVAKPKVKKAEKKRETLPEKMARKRRRLKQIRLSFVKKPKKSMRRAY

Homology

[Close]

BLAST of Sed0019900 vs. NCBI nr
Match: XP_038880042.1 (pentatricopeptide repeat-containing protein PNM1, mitochondrial [Benincasa hispida])

HSP 1 Score: 917.1 bits (2369), Expect = 6.7e-263
Identity = 451/527 (85.58%), Postives = 490/527 (92.98%), Query Frame = 0


Query: 1   MPPLTNVHLRRFLIRSLSSYSSSSSPSRSLNEATRTVVLHRNPTSVFHHFRHQGPALRFS 60
           MPPL  + LR   IRSLSS SS+     SLN+ +R V+LHRN TS+FHHFRH   ALR+S
Sbjct: 1   MPPLPYLQLRTLFIRSLSSPSST-----SLNDCSRNVLLHRNLTSLFHHFRHHEAALRYS 60

Query: 61  NPLQLSLSHSFFSDSGENDVDQTSQSLAAELLRDPDLDPLPITERLQLSFSHIKPNPELV 120
           +PL LSLSHSFFS+SG+ND+DQTSQSLA+ELL+DPDLDPLPIT+RLQLSFSH+KPNPELV
Sbjct: 61  SPLYLSLSHSFFSESGDNDLDQTSQSLASELLKDPDLDPLPITQRLQLSFSHVKPNPELV 120

Query: 121 LNTLNLASEAGRTVLGFNDWLVSNPDFNHTDETISYFVDYFGRRKDFNSIHEVLAKGLGV 180
           LNTLNL+SEAGRTVLGFN+WLVSNPDF+HTDETISYF+DYFGRRKDFN++HEVLAKGLG+
Sbjct: 121 LNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFIDYFGRRKDFNAVHEVLAKGLGI 180

Query: 181 SGDKTLQSTIDRFARAGRHTKLISFFETMEKNYGFKRDKESLRMVVEKLCENGFASHAEK 240
           SG KTL+S+IDRFARAGR TKLISFFETMEKNYG KRDKESLR+VVEKLCENGFASHAEK
Sbjct: 181 SGAKTLRSSIDRFARAGRSTKLISFFETMEKNYGLKRDKESLRLVVEKLCENGFASHAEK 240

Query: 241 VVKDLANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTPAYNALLDCVCK 300
           +VKDLANEFFPDEAICDTL+KGWCVD KLDEAKRLAGEMYRGGFELGT AYNALLDCVCK
Sbjct: 241 MVKDLANEFFPDEAICDTLVKGWCVDGKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCK 300

Query: 301 LCRKKDPFRLQSEAEVVLVEMDYRGVPRNGETFNVLINNLCKIRKTSEALNLFHRMGEWG 360
           LCRKKDPFRL SEAE +LVEMDYRGVPRN ETFNVLINNLCKIRKTS+A+NLFHRMGEWG
Sbjct: 301 LCRKKDPFRLHSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTSDAVNLFHRMGEWG 360

Query: 361 CLPDAETFVILIKSLYQAARTGEGDEMIDRMRSSGYGDALDKKAYYDFLKILCGIERIDH 420
           C P+AETF+ILIKSLYQAARTGEGDEMIDRMRS+GYGDALDKKAYY+FLKILCGIERIDH
Sbjct: 361 CHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYGDALDKKAYYEFLKILCGIERIDH 420

Query: 421 ALIVFEKMKNDGCEPGIKTYDLLMGKFCAHNRLDKANSLYNEAQKRGVPVVSKVYKVDPR 480
           AL+VF KMK DGCEPGIKTYDLLMGK CAHNRLDKANSL+NEAQKRGVPV  K Y+VDPR
Sbjct: 421 ALVVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDKANSLFNEAQKRGVPVTPKAYQVDPR 480

Query: 481 YVAKPKVKKAEKKRETLPEKMARKRRRLKQIRLSFVKKPKKSMRRAY 528
           YV KPKV K EKKRETLPEKMARKRRRLKQIRLSFVKKPKK+MRRA+
Sbjct: 481 YVKKPKVNKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKAMRRAF 522

[Close]

BLAST of Sed0019900 vs. NCBI nr
Match: XP_023531133.1 (pentatricopeptide repeat-containing protein PNM1, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 916.0 bits (2366), Expect = 1.5e-262
Identity = 455/529 (86.01%), Postives = 493/529 (93.19%), Query Frame = 0


Query: 1   MPPLTNVHLRRFLIRSL--SSYSSSSSPSRSLNEATRTVVLHRNPTSVFHHFRHQGPALR 60
           MPPL  +HLRRF IRSL  SSY S+SS S SLNEA+++VVL R+ TSVFHHFR QGPAL 
Sbjct: 1   MPPLPYLHLRRFFIRSLSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRQGPALG 60

Query: 61  FSNPLQLSLSHSFFSDSGENDVDQTSQSLAAELLRDPDLDPLPITERLQLSFSHIKPNPE 120
            S   QLSLSHSFFS+SGENDVDQ+SQSLAAELL+DPDLDPLPIT+RLQLSFSH+KPNPE
Sbjct: 61  CSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLSFSHVKPNPE 120

Query: 121 LVLNTLNLASEAGRTVLGFNDWLVSNPDFNHTDETISYFVDYFGRRKDFNSIHEVLAKGL 180
           LVLNTLNL+SEAGRTVLGFN+WL+SNPDF+HTDETISYFVDYFGRRKDFNSIHEVLAKG 
Sbjct: 121 LVLNTLNLSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGS 180

Query: 181 GVSGDKTLQSTIDRFARAGRHTKLISFFETMEKNYGFKRDKESLRMVVEKLCENGFASHA 240
           G+SG KTL+STIDRFARAGR TKL+SFFETMEKNYGFKRDKES+R+VVEKLCENG+ASHA
Sbjct: 181 GISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRIVVEKLCENGYASHA 240

Query: 241 EKVVKDLANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTPAYNALLDCV 300
           EK+VKDLA+EFFPDEAICD LI+GWCVDEK DEAKRLAGEMYRGGFELGT AYNALLDCV
Sbjct: 241 EKMVKDLAHEFFPDEAICDALIRGWCVDEKFDEAKRLAGEMYRGGFELGTTAYNALLDCV 300

Query: 301 CKLCRKKDPFRLQSEAEVVLVEMDYRGVPRNGETFNVLINNLCKIRKTSEALNLFHRMGE 360
           CKLCRKKDPF+LQSEAE +LVEMD RGVPRN ETFNVLINNLCKIRKT++ALNLFHRMGE
Sbjct: 301 CKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGE 360

Query: 361 WGCLPDAETFVILIKSLYQAARTGEGDEMIDRMRSSGYGDALDKKAYYDFLKILCGIERI 420
           WGC P+AETF+ILIKSLYQAARTGEGDEMIDRMRS+GY DALDKKAYY+FLKILCGIERI
Sbjct: 361 WGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERI 420

Query: 421 DHALIVFEKMKNDGCEPGIKTYDLLMGKFCAHNRLDKANSLYNEAQKRGVPVVSKVYKVD 480
           DHALIVF KMK DGCEPGIKTYDLLMGK CAHNRLD+ANSL+NEAQKRGVPV  K Y+V+
Sbjct: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVE 480

Query: 481 PRYVAKPKVKKAEKKRETLPEKMARKRRRLKQIRLSFVKKPKKSMRRAY 528
           PRY  KPKVKK EKKRETLPEKMARKRRRLKQIRLSFVKKPKK+MRRA+
Sbjct: 481 PRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKTMRRAF 529

[Close]

BLAST of Sed0019900 vs. NCBI nr
Match: XP_022933386.1 (pentatricopeptide repeat-containing protein PNM1, mitochondrial-like [Cucurbita moschata] >KAG6587594.1 Pentatricopeptide repeat-containing protein PNM1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021560.1 Pentatricopeptide repeat-containing protein PNM1, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 915.2 bits (2364), Expect = 2.5e-262
Identity = 455/529 (86.01%), Postives = 492/529 (93.01%), Query Frame = 0


Query: 1   MPPLTNVHLRRFLIRSL--SSYSSSSSPSRSLNEATRTVVLHRNPTSVFHHFRHQGPALR 60
           MPPL  +HLRRF IRSL  SSY S+SS S SLNEA+++VVL R+ TSVFHHFR QGPAL 
Sbjct: 1   MPPLPYLHLRRFFIRSLSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRQGPALG 60

Query: 61  FSNPLQLSLSHSFFSDSGENDVDQTSQSLAAELLRDPDLDPLPITERLQLSFSHIKPNPE 120
            S   QLSLSHSFFS+SGENDVDQ+SQSLAAELL+DPDLDPLPIT+RLQL FSH+KPNPE
Sbjct: 61  CSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLIFSHVKPNPE 120

Query: 121 LVLNTLNLASEAGRTVLGFNDWLVSNPDFNHTDETISYFVDYFGRRKDFNSIHEVLAKGL 180
           LVLNTLNL+SEAGRTVLGFN+WL+SNPDF+HTDETISYFVDYFGRRKDFNSIHEVLAKG 
Sbjct: 121 LVLNTLNLSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGS 180

Query: 181 GVSGDKTLQSTIDRFARAGRHTKLISFFETMEKNYGFKRDKESLRMVVEKLCENGFASHA 240
           G+SG KTL+STIDRFARAGR TKL+SFFETMEKNYGFKRDKES+RMVVEKLCENG+ASHA
Sbjct: 181 GISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRMVVEKLCENGYASHA 240

Query: 241 EKVVKDLANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTPAYNALLDCV 300
           EK+VKDLA+EFFPDEAICD LIKGWCVDEK DEAKRLAGEMYRGGFELGT AYNALLDCV
Sbjct: 241 EKMVKDLAHEFFPDEAICDALIKGWCVDEKFDEAKRLAGEMYRGGFELGTTAYNALLDCV 300

Query: 301 CKLCRKKDPFRLQSEAEVVLVEMDYRGVPRNGETFNVLINNLCKIRKTSEALNLFHRMGE 360
           CKLCRKKDPF+LQSEAE +LVEMD RGVPRN ETFNVLINNLCKIRKT++ALNLFHRMGE
Sbjct: 301 CKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGE 360

Query: 361 WGCLPDAETFVILIKSLYQAARTGEGDEMIDRMRSSGYGDALDKKAYYDFLKILCGIERI 420
           WGC P+AETF+ILIKSLYQAARTGEGDEMIDRMRS+GY DALDKKAYY+FLKILCGIERI
Sbjct: 361 WGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERI 420

Query: 421 DHALIVFEKMKNDGCEPGIKTYDLLMGKFCAHNRLDKANSLYNEAQKRGVPVVSKVYKVD 480
           DHALIVF KMK DGCEPGIKTYDLLMGK CAHNRLD+ANSL+NEAQKRGVPV  K Y+V+
Sbjct: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVE 480

Query: 481 PRYVAKPKVKKAEKKRETLPEKMARKRRRLKQIRLSFVKKPKKSMRRAY 528
           PRY  KPKVKK EKKRETLPEKMARKRRRLKQIRLSFVKKPK++MRRA+
Sbjct: 481 PRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKRTMRRAF 529

[Close]

BLAST of Sed0019900 vs. NCBI nr
Match: XP_022966044.1 (pentatricopeptide repeat-containing protein PNM1, mitochondrial-like [Cucurbita maxima] >XP_022966052.1 pentatricopeptide repeat-containing protein PNM1, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 914.8 bits (2363), Expect = 3.3e-262
Identity = 454/529 (85.82%), Postives = 493/529 (93.19%), Query Frame = 0


Query: 1   MPPLTNVHLRRFLIRSL--SSYSSSSSPSRSLNEATRTVVLHRNPTSVFHHFRHQGPALR 60
           MPPL  +HLRRF IRSL  SSY S+SS S SLNEA+++VVL R+ TSVFHHFR +GPAL 
Sbjct: 1   MPPLPYLHLRRFFIRSLSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRRGPALG 60

Query: 61  FSNPLQLSLSHSFFSDSGENDVDQTSQSLAAELLRDPDLDPLPITERLQLSFSHIKPNPE 120
            S   QLSLSHSFFS+SGENDVDQ+SQSLAAELL+DPDLDPLPIT+RLQL FSH+KPNPE
Sbjct: 61  CSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLCFSHVKPNPE 120

Query: 121 LVLNTLNLASEAGRTVLGFNDWLVSNPDFNHTDETISYFVDYFGRRKDFNSIHEVLAKGL 180
           L+LNTLN +SEAGRTVLGFN+WL+SNPDF+HTDETISYFVDYFGRRKDFNSIHEVLAKG 
Sbjct: 121 LILNTLNFSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGS 180

Query: 181 GVSGDKTLQSTIDRFARAGRHTKLISFFETMEKNYGFKRDKESLRMVVEKLCENGFASHA 240
           G+SG KTL+STIDRFARAGR TKL+SFFETMEKNYGFKRDKES+RMVVEKLCENG+ASHA
Sbjct: 181 GISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRMVVEKLCENGYASHA 240

Query: 241 EKVVKDLANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTPAYNALLDCV 300
           EK+VKDLA+EFFPDEAICDTLIKGWCV+EKLDEAKRLAGEMYRGGFELGT AYNALLDCV
Sbjct: 241 EKMVKDLAHEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 300

Query: 301 CKLCRKKDPFRLQSEAEVVLVEMDYRGVPRNGETFNVLINNLCKIRKTSEALNLFHRMGE 360
           CKLCRKKDPF+LQSEAE +LVEMD RGVPRN ETFNVLINNLCKIRKT++ALNLFHRMGE
Sbjct: 301 CKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGE 360

Query: 361 WGCLPDAETFVILIKSLYQAARTGEGDEMIDRMRSSGYGDALDKKAYYDFLKILCGIERI 420
           WGC P+AETF+ILIKSLYQAARTGEGDEMIDRMRS+GY DALDKKAYY+FLKILCGIERI
Sbjct: 361 WGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERI 420

Query: 421 DHALIVFEKMKNDGCEPGIKTYDLLMGKFCAHNRLDKANSLYNEAQKRGVPVVSKVYKVD 480
           DHALIVF KMK DGCEPGIKTYDLLMGK CAHNRLD+ANSL+NEAQKRGVPV  K Y+V+
Sbjct: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVE 480

Query: 481 PRYVAKPKVKKAEKKRETLPEKMARKRRRLKQIRLSFVKKPKKSMRRAY 528
           PRY  KPKVKK EKKRETLPEKMARKRRRLKQIRLSFVKKPKK+MRRA+
Sbjct: 481 PRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKTMRRAF 529

[Close]

BLAST of Sed0019900 vs. NCBI nr
Match: XP_008453300.1 (PREDICTED: pentatricopeptide repeat-containing protein PNM1, mitochondrial [Cucumis melo] >KAA0058007.1 pentatricopeptide repeat-containing protein PNM1 [Cucumis melo var. makuwa] >TYJ98230.1 pentatricopeptide repeat-containing protein PNM1 [Cucumis melo var. makuwa])

HSP 1 Score: 893.6 bits (2308), Expect = 7.9e-256
Identity = 440/527 (83.49%), Postives = 482/527 (91.46%), Query Frame = 0


Query: 1   MPPLTNVHLRRFLIRSLSSYSSSSSPSRSLNEATRTVVLHRNPTSVFHHFRHQGPALRFS 60
           MPPL  + LR   +RSL     SSS + SLN++ RTV+LHRN TS+FHHFRH G ALRFS
Sbjct: 1   MPPLPYLQLRSLFLRSL-----SSSSTNSLNDSARTVLLHRNLTSLFHHFRHHGAALRFS 60

Query: 61  NPLQLSLSHSFFSDSGENDVDQTSQSLAAELLRDPDLDPLPITERLQLSFSHIKPNPELV 120
           +PL LSLSHSF S+SG NDVDQTSQSLA+ELL+DPD DPLPIT+RLQLSFSH+KPNPELV
Sbjct: 61  SPLYLSLSHSFSSESGNNDVDQTSQSLASELLKDPDSDPLPITQRLQLSFSHVKPNPELV 120

Query: 121 LNTLNLASEAGRTVLGFNDWLVSNPDFNHTDETISYFVDYFGRRKDFNSIHEVLAKGLGV 180
            NTLNL+SEAGRTVLGFN+WLVSNPDF+HTDETISYFVDYFGRRKDFN++HEVLAKGLG+
Sbjct: 121 RNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNAVHEVLAKGLGI 180

Query: 181 SGDKTLQSTIDRFARAGRHTKLISFFETMEKNYGFKRDKESLRMVVEKLCENGFASHAEK 240
           +G KTL+S+I RFARAGR TKLISFFETMEKNYG KRDK+SLRMVVEKL ENGF SHAEK
Sbjct: 181 NGPKTLESSIHRFARAGRPTKLISFFETMEKNYGLKRDKKSLRMVVEKLSENGFGSHAEK 240

Query: 241 VVKDLANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTPAYNALLDCVCK 300
           +VKDLANEFFPDEAICDTLIKGWCV+EKLDEAKRLAGEMYRGGFELGT AYNALLDCVCK
Sbjct: 241 MVKDLANEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCK 300

Query: 301 LCRKKDPFRLQSEAEVVLVEMDYRGVPRNGETFNVLINNLCKIRKTSEALNLFHRMGEWG 360
           LCRKKDPFRL SEAE +LVEMD RGVPRN ETFNVLINNLCKIR+T++A+NLFHRMGEWG
Sbjct: 301 LCRKKDPFRLHSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRRTTDAVNLFHRMGEWG 360

Query: 361 CLPDAETFVILIKSLYQAARTGEGDEMIDRMRSSGYGDALDKKAYYDFLKILCGIERIDH 420
           C P+AETF+ILI+SLYQAARTGEGDEMIDRM+S GYGDALDKKAYY+F+KILCGIERIDH
Sbjct: 361 CHPNAETFLILIRSLYQAARTGEGDEMIDRMKSVGYGDALDKKAYYEFMKILCGIERIDH 420

Query: 421 ALIVFEKMKNDGCEPGIKTYDLLMGKFCAHNRLDKANSLYNEAQKRGVPVVSKVYKVDPR 480
           AL+VF KMK DGCEPGIKTYDLLMGK CAHNRLDKANSL+NEAQKRGVPV  K Y+VDP+
Sbjct: 421 ALVVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDKANSLFNEAQKRGVPVTPKAYQVDPK 480

Query: 481 YVAKPKVKKAEKKRETLPEKMARKRRRLKQIRLSFVKKPKKSMRRAY 528
           Y+ KPKVKK  KKRETLPEKMARKRRRLKQIRLSFVKKPKK MRRA+
Sbjct: 481 YMKKPKVKKVAKKRETLPEKMARKRRRLKQIRLSFVKKPKKGMRRAF 522

[Close]

BLAST of Sed0019900 vs. ExPASy Swiss-Prot
Match: Q9FME4 (Pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PNM1 PE=1 SV=1)

HSP 1 Score: 621.7 bits (1602), Expect = 7.6e-177
Identity = 319/532 (59.96%), Postives = 400/532 (75.19%), Query Frame = 0


Query: 1   MPP-LTNVHLRRFLIRSL---SSYSSSSSPSRSLNEATRTVVLHRNPTSVFHHFRHQGPA 60
           MPP L ++ LRR L+RS    SS ++  S  R ++       L  + +S+F  F    P+
Sbjct: 1   MPPSLPSLQLRRLLLRSFISSSSVNTLQSQPRIISSKPLFSPLPPSRSSIFSTF----PS 60

Query: 61  LRFSNPLQLSLSHSFFSDSGENDVDQTSQSLAAELLRDPDLDPLPITERLQLSFSHIKPN 120
             FS+           ++S   D ++ + S + EL  +PD +   I++R  LSFSHI PN
Sbjct: 61  RFFSSETN--------AESESLDSNEIALSFSKELTGNPDAESQTISQRFNLSFSHITPN 120

Query: 121 PELVLNTLNLASEAGRTVLGFNDWLVSNPDFNHTDETISYFVDYFGRRKDFNSIHEVLAK 180
           P+L+L TLNL+ EAGR  LGFN+WL SN +F+HTDET+S+FVDYFGRRKDF  + E+++K
Sbjct: 121 PDLILQTLNLSPEAGRAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKGMLEIISK 180

Query: 181 GLGVSGDKTLQSTIDRFARAGRHTKLISFFETMEKNYGFKRDKESLRMVVEKLCENGFAS 240
             G++G KTL+S IDR  RAGR  ++  FFE ME +YG KRDKESL +VV+KLCE G AS
Sbjct: 181 YKGIAGGKTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHAS 240

Query: 241 HAEKVVKDLANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTPAYNALLD 300
            AEK+VK+ ANE FPDE ICD LI GWC+ EKLDEA RLAGEM RGGFE+GT AYN +LD
Sbjct: 241 IAEKMVKNTANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLD 300

Query: 301 CVCKLCRKKDPFRLQSEAEVVLVEMDYRGVPRNGETFNVLINNLCKIRKTSEALNLFHRM 360
           CVCKLCRKKDPF+LQ E E VL+EM++RGVPRN ETFNVLINNLCKIR+T EA+ LF RM
Sbjct: 301 CVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRM 360

Query: 361 GEWGCLPDAETFVILIKSLYQAARTGEGDEMIDRMRSSGYGDALDKKAYYDFLKILCGIE 420
           GEWGC PDAET+++LI+SLYQAAR GEGDEMID+M+S+GYG+ L+KK YY FLKILCGIE
Sbjct: 361 GEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIE 420

Query: 421 RIDHALIVFEKMKNDGCEPGIKTYDLLMGKFCAHNRLDKANSLYNEAQKRGVPVVSKVYK 480
           R++HA+ VF+ MK +GC+PGIKTYDLLMGK CA+N+L +AN LY EA K+G+ V  K Y+
Sbjct: 421 RLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAVSPKEYR 480

Query: 481 VDPRYVAKPKVKKAE---KKRETLPEKMARKRRRLKQIRLSFVKKPKKSMRR 526
           VDPR++ K K K+ +   KKRETLPEK ARK++RLKQI +SFVKKP   MRR
Sbjct: 481 VDPRFM-KKKTKEVDSNVKKRETLPEKTARKKKRLKQINMSFVKKPHNKMRR 519

[Close]

BLAST of Sed0019900 vs. ExPASy Swiss-Prot
Match: Q9FLJ6 (Pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g61370 PE=2 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.9e-34
Identity = 101/417 (24.22%), Postives = 191/417 (45.80%), Query Frame = 0


Query: 113 IKPNPELVLNTLNLASE--AGRTVLGFNDWLVSNPDFNHTDETISYFVDYFGRRKDFNSI 172
           + P+  LV   +       + R +L F  W   +   +  D+  +Y +     +KD  ++
Sbjct: 63  VSPSSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAM 122

Query: 173 HEVLA---KGLGVSGDKTLQSTIDRFARAGRHTKLISFFETMEKNYGFKRDKESLRMVVE 232
             +L+   K       +T     +   + G+    I  F+ ++K +   +D  ++  ++ 
Sbjct: 123 QILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDK-FSCPQDGFTVTAIIS 182

Query: 233 KLCENGFASHAEKVVKDLANEFFPDE-AICDTLIKGWCVDEKLDEAKRLAGEMYRGGFEL 292
            LC  G    A  V+    +    +E ++  +L+ GW V   + EA+R+  +M   G   
Sbjct: 183 ALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITP 242

Query: 293 GTPAYNALLDCVCKLCRKKDPFRLQSEAEVVLVEMDYRGVPRNGETFNVLINNLCKIRKT 352
               +N+LL C+C+    ++P  L  EA  +++EM    +     ++N+L++ L + R+ 
Sbjct: 243 DLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRV 302

Query: 353 SEALNLFHRMGEWGCLPDAETFVILIKSLYQAARTGEGDEMIDRMRSSGYGDALDKKAYY 412
            E+  +  +M   GC PD  ++  +++ LY   R G+G++++D M   G+    ++K YY
Sbjct: 303 RESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRP--ERKFYY 362

Query: 413 DFLKILCGIERIDHALIVFEKMKNDGCEPGIKTYDLLMGKFCAHNRLDKANSLYNEAQKR 472
           D + +LCG+ER++ AL +FEKMK        + YDLL+ K C     +K   L+ EA   
Sbjct: 363 DLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALSI 422

Query: 473 GVPVVSKVYKVDPRY--VAKPKVKKAEKKRETLPEKMARKRRRLKQIRLSFVKKPKK 522
            V +   +  +DP    V KP   K E           +   R+ + +     KPK+
Sbjct: 423 DVTLSCSISLLDPSVTEVFKPMKMKEEAAMVDRRALNLKIHARMNKTKPKLKLKPKR 476

[Close]

BLAST of Sed0019900 vs. ExPASy Swiss-Prot
Match: Q9LUJ4 (Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22670 PE=2 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 2.6e-31
Identity = 93/354 (26.27%), Postives = 165/354 (46.61%), Query Frame = 0


Query: 107 QLSFSHIKPNPELVLNTLNLASEAGRTVLGFNDWLVSNPDFNHTDETISYFVDYFGRRKD 166
           +LS   +     LVL  L   S       GF  W  S   + H+  T +  VD  G+ ++
Sbjct: 122 ELSKCDVVVTESLVLQVLRRFSNGWNQAYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRN 181

Query: 167 FNSIHEVLAKGLGVSGDK-----TLQSTIDRFARAGRHTKLISFFETMEKNYGFKRDKES 226
           F+ + E++ +       K     T+   + R A++G++ K +  F  MEK+YG K D  +
Sbjct: 182 FDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIA 241

Query: 227 LRMVVEKLCENGFASHAEKVVKDLANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYR 286
           +  +++ L +     HA +V   L +   PD    + LI G+C   K D+A+ +   M  
Sbjct: 242 MNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKV 301

Query: 287 GGFELGTPAYNALLDCVCKLCRKKDPFRLQSEAEVVLVEMDYRGVPRNGETFNVLINNLC 346
             F      Y + ++  C    K+  FR  +E   +L EM   G   N  T+ +++++L 
Sbjct: 302 TEFTPDVVTYTSFVEAYC----KEGDFRRVNE---MLEEMRENGCNPNVVTYTIVMHSLG 361

Query: 347 KIRKTSEALNLFHRMGEWGCLPDAETFVILIKSLYQAARTGEGDEMIDRMRSSGYGDALD 406
           K ++ +EAL ++ +M E GC+PDA+ +  LI  L +  R  +  E+ + M + G     D
Sbjct: 362 KSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGV--RRD 421

Query: 407 KKAYYDFLKILCGIERIDHALIVFEKMKN---DGCEPGIKTYDLLMGKFCAHNR 453
              Y   +       R + AL + ++M++   + C P ++TY  L+ K C H +
Sbjct: 422 VLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLL-KMCCHKK 465

[Close]

BLAST of Sed0019900 vs. ExPASy Swiss-Prot
Match: P0C8A0 (Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana OX=3702 GN=At3g49730 PE=2 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 3.3e-31
Identity = 96/368 (26.09%), Postives = 158/368 (42.93%), Query Frame = 0


Query: 106 LQLSFSHIKPNPELVLNTLNLASEAGRTVLGFNDWLVSNPDFNHTDETISYFVDYFGRRK 165
           L L+ S I   P L++  L+   +AG     F  W    P + H+ E     V    + +
Sbjct: 86  LALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMR 145

Query: 166 DFNS----IHEVLAKGLGVSGDKTLQSTIDRFARAGRHTKLISFFETMEKNYGFKRDKES 225
            F +    I E+      +   +     + RFA A    K +   + M K YG + D+  
Sbjct: 146 QFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPK-YGLEPDEYV 205

Query: 226 LRMVVEKLCENGFASHAEKVVKDLANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYR 285
              +++ LC+NG    A KV +D+  +F P+     +L+ GWC + KL EAK +  +M  
Sbjct: 206 FGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKE 265

Query: 286 GGFELGTPAYNALLDCVCKLCRKKDPFRLQSEAEVVLVEMDYRGVPRNGETFNVLINNLC 345
            G E     +  LL       +  D + L +       +M  RG   N   + VLI  LC
Sbjct: 266 AGLEPDIVVFTNLLSGYAHAGKMADAYDLMN-------DMRKRGFEPNVNCYTVLIQALC 325

Query: 346 KIRK-TSEALNLFHRMGEWGCLPDAETFVILIKSLYQAARTGEGDEMIDRMRSSGYGDAL 405
           +  K   EA+ +F  M  +GC  D  T+  LI    +     +G  ++D MR  G   + 
Sbjct: 326 RTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPS- 385

Query: 406 DKKAYYDFLKILCGIERIDHALIVFEKMKNDGCEPGIKTYDLLMGKFCAHNRLDKANSLY 465
            +  Y   +      E+ +  L + EKMK  GC P +  Y++++   C    + +A  L+
Sbjct: 386 -QVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLW 443

Query: 466 NEAQKRGV 469
           NE +  G+
Sbjct: 446 NEMEANGL 443

[Close]

BLAST of Sed0019900 vs. ExPASy Swiss-Prot
Match: Q9C9A2 (Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g71060 PE=2 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 7.0e-29
Identity = 107/411 (26.03%), Postives = 181/411 (44.04%), Query Frame = 0


Query: 66  SLSHSFFSDSGE-----NDVDQTSQSLAAELLRDPDLDPLPITERLQLSFSHIKPNPELV 125
           +L  SF + S E     ND  Q ++ +   L +  D       E L L+ + +K +P L+
Sbjct: 43  TLYGSFHASSVETQVSANDASQDAERICKILTKFTDSK----VETL-LNEASVKLSPALI 102

Query: 126 LNTLNLASEAGRTVLGFNDWLVSNPDFNHTDETISYFVDYFGRRKDFNSIHEVL--AKGL 185
              L   S AG   L    W  +   F HT    +  ++  G+ K F  I  ++   K  
Sbjct: 103 EEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAK 162

Query: 186 GVSGDKTLQSTIDRFARAGRHTKLISFFETMEKNYGFKRDKESLRMVVEKLCENGFASHA 245
            +   +T      R+ARA +  + I  F  ME+ +GFK +      +++ L ++     A
Sbjct: 163 KLLSKETFALISRRYARARKVKEAIGAFHKMEE-FGFKMESSDFNRMLDTLSKSRNVGDA 222

Query: 246 EKVVKDLANE-FFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTPAYNALLDC 305
           +KV   +  + F PD      L++GW  +  L     +  EM   GFE    AY  +++ 
Sbjct: 223 QKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINA 282

Query: 306 VCKLCRKKDPFRLQSEAEVVLVEMDYRGVPRNGETFNVLINNLCKIRKTSEALNLFHRMG 365
            CK  + ++  R  +       EM+ R    +   F  LIN L   +K ++AL  F R  
Sbjct: 283 HCKAKKYEEAIRFFN-------EMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSK 342

Query: 366 EWGCLPDAETFVILIKSLYQAARTGEGDEMIDRMRSSGYGDALDKKAYYDFLKILCGIER 425
             G   +A T+  L+ +   + R  +  + +D MR  G G   + + Y   L  L  ++R
Sbjct: 343 SSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGP--NARTYDIILHHLIRMQR 402

Query: 426 IDHALIVFEKMKNDGCEPGIKTYDLLMGKFCAHNRLDKANSLYNEAQKRGV 469
              A  V++ M    CEP + TY++++  FC   RLD A  +++E + +GV
Sbjct: 403 SKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGV 435

[Close]

BLAST of Sed0019900 vs. ExPASy TrEMBL
Match: A0A6J1EYW9 (pentatricopeptide repeat-containing protein PNM1, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111440816 PE=4 SV=1)

HSP 1 Score: 915.2 bits (2364), Expect = 1.2e-262
Identity = 455/529 (86.01%), Postives = 492/529 (93.01%), Query Frame = 0


Query: 1   MPPLTNVHLRRFLIRSL--SSYSSSSSPSRSLNEATRTVVLHRNPTSVFHHFRHQGPALR 60
           MPPL  +HLRRF IRSL  SSY S+SS S SLNEA+++VVL R+ TSVFHHFR QGPAL 
Sbjct: 1   MPPLPYLHLRRFFIRSLSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRQGPALG 60

Query: 61  FSNPLQLSLSHSFFSDSGENDVDQTSQSLAAELLRDPDLDPLPITERLQLSFSHIKPNPE 120
            S   QLSLSHSFFS+SGENDVDQ+SQSLAAELL+DPDLDPLPIT+RLQL FSH+KPNPE
Sbjct: 61  CSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLIFSHVKPNPE 120

Query: 121 LVLNTLNLASEAGRTVLGFNDWLVSNPDFNHTDETISYFVDYFGRRKDFNSIHEVLAKGL 180
           LVLNTLNL+SEAGRTVLGFN+WL+SNPDF+HTDETISYFVDYFGRRKDFNSIHEVLAKG 
Sbjct: 121 LVLNTLNLSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGS 180

Query: 181 GVSGDKTLQSTIDRFARAGRHTKLISFFETMEKNYGFKRDKESLRMVVEKLCENGFASHA 240
           G+SG KTL+STIDRFARAGR TKL+SFFETMEKNYGFKRDKES+RMVVEKLCENG+ASHA
Sbjct: 181 GISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRMVVEKLCENGYASHA 240

Query: 241 EKVVKDLANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTPAYNALLDCV 300
           EK+VKDLA+EFFPDEAICD LIKGWCVDEK DEAKRLAGEMYRGGFELGT AYNALLDCV
Sbjct: 241 EKMVKDLAHEFFPDEAICDALIKGWCVDEKFDEAKRLAGEMYRGGFELGTTAYNALLDCV 300

Query: 301 CKLCRKKDPFRLQSEAEVVLVEMDYRGVPRNGETFNVLINNLCKIRKTSEALNLFHRMGE 360
           CKLCRKKDPF+LQSEAE +LVEMD RGVPRN ETFNVLINNLCKIRKT++ALNLFHRMGE
Sbjct: 301 CKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGE 360

Query: 361 WGCLPDAETFVILIKSLYQAARTGEGDEMIDRMRSSGYGDALDKKAYYDFLKILCGIERI 420
           WGC P+AETF+ILIKSLYQAARTGEGDEMIDRMRS+GY DALDKKAYY+FLKILCGIERI
Sbjct: 361 WGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERI 420

Query: 421 DHALIVFEKMKNDGCEPGIKTYDLLMGKFCAHNRLDKANSLYNEAQKRGVPVVSKVYKVD 480
           DHALIVF KMK DGCEPGIKTYDLLMGK CAHNRLD+ANSL+NEAQKRGVPV  K Y+V+
Sbjct: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVE 480

Query: 481 PRYVAKPKVKKAEKKRETLPEKMARKRRRLKQIRLSFVKKPKKSMRRAY 528
           PRY  KPKVKK EKKRETLPEKMARKRRRLKQIRLSFVKKPK++MRRA+
Sbjct: 481 PRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKRTMRRAF 529

[Close]

BLAST of Sed0019900 vs. ExPASy TrEMBL
Match: A0A6J1HLZ2 (pentatricopeptide repeat-containing protein PNM1, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111465769 PE=4 SV=1)

HSP 1 Score: 914.8 bits (2363), Expect = 1.6e-262
Identity = 454/529 (85.82%), Postives = 493/529 (93.19%), Query Frame = 0


Query: 1   MPPLTNVHLRRFLIRSL--SSYSSSSSPSRSLNEATRTVVLHRNPTSVFHHFRHQGPALR 60
           MPPL  +HLRRF IRSL  SSY S+SS S SLNEA+++VVL R+ TSVFHHFR +GPAL 
Sbjct: 1   MPPLPYLHLRRFFIRSLSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRRGPALG 60

Query: 61  FSNPLQLSLSHSFFSDSGENDVDQTSQSLAAELLRDPDLDPLPITERLQLSFSHIKPNPE 120
            S   QLSLSHSFFS+SGENDVDQ+SQSLAAELL+DPDLDPLPIT+RLQL FSH+KPNPE
Sbjct: 61  CSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLCFSHVKPNPE 120

Query: 121 LVLNTLNLASEAGRTVLGFNDWLVSNPDFNHTDETISYFVDYFGRRKDFNSIHEVLAKGL 180
           L+LNTLN +SEAGRTVLGFN+WL+SNPDF+HTDETISYFVDYFGRRKDFNSIHEVLAKG 
Sbjct: 121 LILNTLNFSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGS 180

Query: 181 GVSGDKTLQSTIDRFARAGRHTKLISFFETMEKNYGFKRDKESLRMVVEKLCENGFASHA 240
           G+SG KTL+STIDRFARAGR TKL+SFFETMEKNYGFKRDKES+RMVVEKLCENG+ASHA
Sbjct: 181 GISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRMVVEKLCENGYASHA 240

Query: 241 EKVVKDLANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTPAYNALLDCV 300
           EK+VKDLA+EFFPDEAICDTLIKGWCV+EKLDEAKRLAGEMYRGGFELGT AYNALLDCV
Sbjct: 241 EKMVKDLAHEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 300

Query: 301 CKLCRKKDPFRLQSEAEVVLVEMDYRGVPRNGETFNVLINNLCKIRKTSEALNLFHRMGE 360
           CKLCRKKDPF+LQSEAE +LVEMD RGVPRN ETFNVLINNLCKIRKT++ALNLFHRMGE
Sbjct: 301 CKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGE 360

Query: 361 WGCLPDAETFVILIKSLYQAARTGEGDEMIDRMRSSGYGDALDKKAYYDFLKILCGIERI 420
           WGC P+AETF+ILIKSLYQAARTGEGDEMIDRMRS+GY DALDKKAYY+FLKILCGIERI
Sbjct: 361 WGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERI 420

Query: 421 DHALIVFEKMKNDGCEPGIKTYDLLMGKFCAHNRLDKANSLYNEAQKRGVPVVSKVYKVD 480
           DHALIVF KMK DGCEPGIKTYDLLMGK CAHNRLD+ANSL+NEAQKRGVPV  K Y+V+
Sbjct: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVE 480

Query: 481 PRYVAKPKVKKAEKKRETLPEKMARKRRRLKQIRLSFVKKPKKSMRRAY 528
           PRY  KPKVKK EKKRETLPEKMARKRRRLKQIRLSFVKKPKK+MRRA+
Sbjct: 481 PRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKTMRRAF 529

[Close]

BLAST of Sed0019900 vs. ExPASy TrEMBL
Match: A0A5A7UTF6 (Pentatricopeptide repeat-containing protein PNM1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold346G00020 PE=4 SV=1)

HSP 1 Score: 893.6 bits (2308), Expect = 3.8e-256
Identity = 440/527 (83.49%), Postives = 482/527 (91.46%), Query Frame = 0


Query: 1   MPPLTNVHLRRFLIRSLSSYSSSSSPSRSLNEATRTVVLHRNPTSVFHHFRHQGPALRFS 60
           MPPL  + LR   +RSL     SSS + SLN++ RTV+LHRN TS+FHHFRH G ALRFS
Sbjct: 1   MPPLPYLQLRSLFLRSL-----SSSSTNSLNDSARTVLLHRNLTSLFHHFRHHGAALRFS 60

Query: 61  NPLQLSLSHSFFSDSGENDVDQTSQSLAAELLRDPDLDPLPITERLQLSFSHIKPNPELV 120
           +PL LSLSHSF S+SG NDVDQTSQSLA+ELL+DPD DPLPIT+RLQLSFSH+KPNPELV
Sbjct: 61  SPLYLSLSHSFSSESGNNDVDQTSQSLASELLKDPDSDPLPITQRLQLSFSHVKPNPELV 120

Query: 121 LNTLNLASEAGRTVLGFNDWLVSNPDFNHTDETISYFVDYFGRRKDFNSIHEVLAKGLGV 180
            NTLNL+SEAGRTVLGFN+WLVSNPDF+HTDETISYFVDYFGRRKDFN++HEVLAKGLG+
Sbjct: 121 RNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNAVHEVLAKGLGI 180

Query: 181 SGDKTLQSTIDRFARAGRHTKLISFFETMEKNYGFKRDKESLRMVVEKLCENGFASHAEK 240
           +G KTL+S+I RFARAGR TKLISFFETMEKNYG KRDK+SLRMVVEKL ENGF SHAEK
Sbjct: 181 NGPKTLESSIHRFARAGRPTKLISFFETMEKNYGLKRDKKSLRMVVEKLSENGFGSHAEK 240

Query: 241 VVKDLANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTPAYNALLDCVCK 300
           +VKDLANEFFPDEAICDTLIKGWCV+EKLDEAKRLAGEMYRGGFELGT AYNALLDCVCK
Sbjct: 241 MVKDLANEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCK 300

Query: 301 LCRKKDPFRLQSEAEVVLVEMDYRGVPRNGETFNVLINNLCKIRKTSEALNLFHRMGEWG 360
           LCRKKDPFRL SEAE +LVEMD RGVPRN ETFNVLINNLCKIR+T++A+NLFHRMGEWG
Sbjct: 301 LCRKKDPFRLHSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRRTTDAVNLFHRMGEWG 360

Query: 361 CLPDAETFVILIKSLYQAARTGEGDEMIDRMRSSGYGDALDKKAYYDFLKILCGIERIDH 420
           C P+AETF+ILI+SLYQAARTGEGDEMIDRM+S GYGDALDKKAYY+F+KILCGIERIDH
Sbjct: 361 CHPNAETFLILIRSLYQAARTGEGDEMIDRMKSVGYGDALDKKAYYEFMKILCGIERIDH 420

Query: 421 ALIVFEKMKNDGCEPGIKTYDLLMGKFCAHNRLDKANSLYNEAQKRGVPVVSKVYKVDPR 480
           AL+VF KMK DGCEPGIKTYDLLMGK CAHNRLDKANSL+NEAQKRGVPV  K Y+VDP+
Sbjct: 421 ALVVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDKANSLFNEAQKRGVPVTPKAYQVDPK 480

Query: 481 YVAKPKVKKAEKKRETLPEKMARKRRRLKQIRLSFVKKPKKSMRRAY 528
           Y+ KPKVKK  KKRETLPEKMARKRRRLKQIRLSFVKKPKK MRRA+
Sbjct: 481 YMKKPKVKKVAKKRETLPEKMARKRRRLKQIRLSFVKKPKKGMRRAF 522

[Close]

BLAST of Sed0019900 vs. ExPASy TrEMBL
Match: A0A1S3BVC3 (pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494058 PE=4 SV=1)

HSP 1 Score: 893.6 bits (2308), Expect = 3.8e-256
Identity = 440/527 (83.49%), Postives = 482/527 (91.46%), Query Frame = 0


Query: 1   MPPLTNVHLRRFLIRSLSSYSSSSSPSRSLNEATRTVVLHRNPTSVFHHFRHQGPALRFS 60
           MPPL  + LR   +RSL     SSS + SLN++ RTV+LHRN TS+FHHFRH G ALRFS
Sbjct: 1   MPPLPYLQLRSLFLRSL-----SSSSTNSLNDSARTVLLHRNLTSLFHHFRHHGAALRFS 60

Query: 61  NPLQLSLSHSFFSDSGENDVDQTSQSLAAELLRDPDLDPLPITERLQLSFSHIKPNPELV 120
           +PL LSLSHSF S+SG NDVDQTSQSLA+ELL+DPD DPLPIT+RLQLSFSH+KPNPELV
Sbjct: 61  SPLYLSLSHSFSSESGNNDVDQTSQSLASELLKDPDSDPLPITQRLQLSFSHVKPNPELV 120

Query: 121 LNTLNLASEAGRTVLGFNDWLVSNPDFNHTDETISYFVDYFGRRKDFNSIHEVLAKGLGV 180
            NTLNL+SEAGRTVLGFN+WLVSNPDF+HTDETISYFVDYFGRRKDFN++HEVLAKGLG+
Sbjct: 121 RNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNAVHEVLAKGLGI 180

Query: 181 SGDKTLQSTIDRFARAGRHTKLISFFETMEKNYGFKRDKESLRMVVEKLCENGFASHAEK 240
           +G KTL+S+I RFARAGR TKLISFFETMEKNYG KRDK+SLRMVVEKL ENGF SHAEK
Sbjct: 181 NGPKTLESSIHRFARAGRPTKLISFFETMEKNYGLKRDKKSLRMVVEKLSENGFGSHAEK 240

Query: 241 VVKDLANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTPAYNALLDCVCK 300
           +VKDLANEFFPDEAICDTLIKGWCV+EKLDEAKRLAGEMYRGGFELGT AYNALLDCVCK
Sbjct: 241 MVKDLANEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCK 300

Query: 301 LCRKKDPFRLQSEAEVVLVEMDYRGVPRNGETFNVLINNLCKIRKTSEALNLFHRMGEWG 360
           LCRKKDPFRL SEAE +LVEMD RGVPRN ETFNVLINNLCKIR+T++A+NLFHRMGEWG
Sbjct: 301 LCRKKDPFRLHSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRRTTDAVNLFHRMGEWG 360

Query: 361 CLPDAETFVILIKSLYQAARTGEGDEMIDRMRSSGYGDALDKKAYYDFLKILCGIERIDH 420
           C P+AETF+ILI+SLYQAARTGEGDEMIDRM+S GYGDALDKKAYY+F+KILCGIERIDH
Sbjct: 361 CHPNAETFLILIRSLYQAARTGEGDEMIDRMKSVGYGDALDKKAYYEFMKILCGIERIDH 420

Query: 421 ALIVFEKMKNDGCEPGIKTYDLLMGKFCAHNRLDKANSLYNEAQKRGVPVVSKVYKVDPR 480
           AL+VF KMK DGCEPGIKTYDLLMGK CAHNRLDKANSL+NEAQKRGVPV  K Y+VDP+
Sbjct: 421 ALVVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDKANSLFNEAQKRGVPVTPKAYQVDPK 480

Query: 481 YVAKPKVKKAEKKRETLPEKMARKRRRLKQIRLSFVKKPKKSMRRAY 528
           Y+ KPKVKK  KKRETLPEKMARKRRRLKQIRLSFVKKPKK MRRA+
Sbjct: 481 YMKKPKVKKVAKKRETLPEKMARKRRRLKQIRLSFVKKPKKGMRRAF 522

[Close]

BLAST of Sed0019900 vs. ExPASy TrEMBL
Match: A0A6J1C4U6 (pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111007404 PE=4 SV=1)

HSP 1 Score: 879.0 bits (2270), Expect = 9.8e-252
Identity = 441/529 (83.36%), Postives = 480/529 (90.74%), Query Frame = 0


Query: 1   MPPLTNVHLRRFLIRSLSSYSSSS--SPSRSLNEATRTVVLHRNPTSVFHHFRHQGPALR 60
           M PL  ++LRR  IRSLSS SS S  S S S NE TR+V+LHRN TS FHHF H G ALR
Sbjct: 1   MTPLLYLYLRRHFIRSLSSSSSLSACSSSSSFNERTRSVLLHRNLTSPFHHFGHNGAALR 60

Query: 61  FSNPLQLSLSHSFFSDSGENDVDQTSQSLAAELLRDPDLDPLPITERLQLSFSHIKPNPE 120
           F++  QLS+SHSF S+SG +  DQTSQSLA+ELL+D D DPLPIT+RL+LSFSH+KPNPE
Sbjct: 61  FNSLSQLSISHSFSSESGHS--DQTSQSLASELLKDADSDPLPITKRLELSFSHVKPNPE 120

Query: 121 LVLNTLNLASEAGRTVLGFNDWLVSNPDFNHTDETISYFVDYFGRRKDFNSIHEVLAKGL 180
           LVLNTLNL+SEAGRTVLGFN+WLVSNPDF+HTD+TISYFVDYFGRRKDFN+IHEVL KG 
Sbjct: 121 LVLNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDDTISYFVDYFGRRKDFNAIHEVLVKGY 180

Query: 181 GVSGDKTLQSTIDRFARAGRHTKLISFFETMEKNYGFKRDKESLRMVVEKLCENGFASHA 240
           GVSG KTL+S+IDR  RAGR TK +SFFE MEK+YGFKRDKESLRMVVEKLCENG ASHA
Sbjct: 181 GVSGAKTLRSSIDRLVRAGRPTKAVSFFEKMEKDYGFKRDKESLRMVVEKLCENGCASHA 240

Query: 241 EKVVKDLANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTPAYNALLDCV 300
           EK+VKDLANEFFPDEA+CD LIKGWCVD KLDEAKRLAGEMYRGGFELGT AYNALLDCV
Sbjct: 241 EKMVKDLANEFFPDEAMCDVLIKGWCVDGKLDEAKRLAGEMYRGGFELGTMAYNALLDCV 300

Query: 301 CKLCRKKDPFRLQSEAEVVLVEMDYRGVPRNGETFNVLINNLCKIRKTSEALNLFHRMGE 360
           CK+CRKKDPFRLQSEAE +LVEMDYRGVPRN ETFNVLINNLCKIRKTS+A+NLF RMGE
Sbjct: 301 CKICRKKDPFRLQSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTSDAVNLFRRMGE 360

Query: 361 WGCLPDAETFVILIKSLYQAARTGEGDEMIDRMRSSGYGDALDKKAYYDFLKILCGIERI 420
           WGCLP+AETF+ILI+SLYQAART EGDEMIDRMRS+GYGDALDKKAYY+FLKILCGIERI
Sbjct: 361 WGCLPNAETFLILIRSLYQAARTAEGDEMIDRMRSAGYGDALDKKAYYEFLKILCGIERI 420

Query: 421 DHALIVFEKMKNDGCEPGIKTYDLLMGKFCAHNRLDKANSLYNEAQKRGVPVVSKVYKVD 480
           DHALIVF KMK DGCEPGIKTYDLLMGKFCAHNRLDKANSL+NEAQ+ GVPV  K Y+VD
Sbjct: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKFCAHNRLDKANSLFNEAQRTGVPVAPKAYQVD 480

Query: 481 PRYVAKPKVKKAEKKRETLPEKMARKRRRLKQIRLSFVKKPKKSMRRAY 528
           PRYV KPKVKKAEKKRETLPEKMARKRRRLKQIRLSFVKKPKK+MRRA+
Sbjct: 481 PRYVKKPKVKKAEKKRETLPEKMARKRRRLKQIRLSFVKKPKKAMRRAF 527

[Close]

BLAST of Sed0019900 vs. TAIR 10
Match: AT5G60960.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 621.7 bits (1602), Expect = 5.4e-178
Identity = 319/532 (59.96%), Postives = 400/532 (75.19%), Query Frame = 0


Query: 1   MPP-LTNVHLRRFLIRSL---SSYSSSSSPSRSLNEATRTVVLHRNPTSVFHHFRHQGPA 60
           MPP L ++ LRR L+RS    SS ++  S  R ++       L  + +S+F  F    P+
Sbjct: 1   MPPSLPSLQLRRLLLRSFISSSSVNTLQSQPRIISSKPLFSPLPPSRSSIFSTF----PS 60

Query: 61  LRFSNPLQLSLSHSFFSDSGENDVDQTSQSLAAELLRDPDLDPLPITERLQLSFSHIKPN 120
             FS+           ++S   D ++ + S + EL  +PD +   I++R  LSFSHI PN
Sbjct: 61  RFFSSETN--------AESESLDSNEIALSFSKELTGNPDAESQTISQRFNLSFSHITPN 120

Query: 121 PELVLNTLNLASEAGRTVLGFNDWLVSNPDFNHTDETISYFVDYFGRRKDFNSIHEVLAK 180
           P+L+L TLNL+ EAGR  LGFN+WL SN +F+HTDET+S+FVDYFGRRKDF  + E+++K
Sbjct: 121 PDLILQTLNLSPEAGRAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKGMLEIISK 180

Query: 181 GLGVSGDKTLQSTIDRFARAGRHTKLISFFETMEKNYGFKRDKESLRMVVEKLCENGFAS 240
             G++G KTL+S IDR  RAGR  ++  FFE ME +YG KRDKESL +VV+KLCE G AS
Sbjct: 181 YKGIAGGKTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHAS 240

Query: 241 HAEKVVKDLANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTPAYNALLD 300
            AEK+VK+ ANE FPDE ICD LI GWC+ EKLDEA RLAGEM RGGFE+GT AYN +LD
Sbjct: 241 IAEKMVKNTANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLD 300

Query: 301 CVCKLCRKKDPFRLQSEAEVVLVEMDYRGVPRNGETFNVLINNLCKIRKTSEALNLFHRM 360
           CVCKLCRKKDPF+LQ E E VL+EM++RGVPRN ETFNVLINNLCKIR+T EA+ LF RM
Sbjct: 301 CVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRM 360

Query: 361 GEWGCLPDAETFVILIKSLYQAARTGEGDEMIDRMRSSGYGDALDKKAYYDFLKILCGIE 420
           GEWGC PDAET+++LI+SLYQAAR GEGDEMID+M+S+GYG+ L+KK YY FLKILCGIE
Sbjct: 361 GEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIE 420

Query: 421 RIDHALIVFEKMKNDGCEPGIKTYDLLMGKFCAHNRLDKANSLYNEAQKRGVPVVSKVYK 480
           R++HA+ VF+ MK +GC+PGIKTYDLLMGK CA+N+L +AN LY EA K+G+ V  K Y+
Sbjct: 421 RLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAVSPKEYR 480

Query: 481 VDPRYVAKPKVKKAE---KKRETLPEKMARKRRRLKQIRLSFVKKPKKSMRR 526
           VDPR++ K K K+ +   KKRETLPEK ARK++RLKQI +SFVKKP   MRR
Sbjct: 481 VDPRFM-KKKTKEVDSNVKKRETLPEKTARKKKRLKQINMSFVKKPHNKMRR 519

[Close]

BLAST of Sed0019900 vs. TAIR 10
Match: AT5G61370.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 148.7 bits (374), Expect = 1.3e-35
Identity = 101/417 (24.22%), Postives = 191/417 (45.80%), Query Frame = 0


Query: 113 IKPNPELVLNTLNLASE--AGRTVLGFNDWLVSNPDFNHTDETISYFVDYFGRRKDFNSI 172
           + P+  LV   +       + R +L F  W   +   +  D+  +Y +     +KD  ++
Sbjct: 63  VSPSSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAM 122

Query: 173 HEVLA---KGLGVSGDKTLQSTIDRFARAGRHTKLISFFETMEKNYGFKRDKESLRMVVE 232
             +L+   K       +T     +   + G+    I  F+ ++K +   +D  ++  ++ 
Sbjct: 123 QILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDK-FSCPQDGFTVTAIIS 182

Query: 233 KLCENGFASHAEKVVKDLANEFFPDE-AICDTLIKGWCVDEKLDEAKRLAGEMYRGGFEL 292
            LC  G    A  V+    +    +E ++  +L+ GW V   + EA+R+  +M   G   
Sbjct: 183 ALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITP 242

Query: 293 GTPAYNALLDCVCKLCRKKDPFRLQSEAEVVLVEMDYRGVPRNGETFNVLINNLCKIRKT 352
               +N+LL C+C+    ++P  L  EA  +++EM    +     ++N+L++ L + R+ 
Sbjct: 243 DLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRV 302

Query: 353 SEALNLFHRMGEWGCLPDAETFVILIKSLYQAARTGEGDEMIDRMRSSGYGDALDKKAYY 412
            E+  +  +M   GC PD  ++  +++ LY   R G+G++++D M   G+    ++K YY
Sbjct: 303 RESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRP--ERKFYY 362

Query: 413 DFLKILCGIERIDHALIVFEKMKNDGCEPGIKTYDLLMGKFCAHNRLDKANSLYNEAQKR 472
           D + +LCG+ER++ AL +FEKMK        + YDLL+ K C     +K   L+ EA   
Sbjct: 363 DLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALSI 422

Query: 473 GVPVVSKVYKVDPRY--VAKPKVKKAEKKRETLPEKMARKRRRLKQIRLSFVKKPKK 522
            V +   +  +DP    V KP   K E           +   R+ + +     KPK+
Sbjct: 423 DVTLSCSISLLDPSVTEVFKPMKMKEEAAMVDRRALNLKIHARMNKTKPKLKLKPKR 476

[Close]

BLAST of Sed0019900 vs. TAIR 10
Match: AT3G49730.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 137.9 bits (346), Expect = 2.4e-32
Identity = 96/368 (26.09%), Postives = 158/368 (42.93%), Query Frame = 0


Query: 106 LQLSFSHIKPNPELVLNTLNLASEAGRTVLGFNDWLVSNPDFNHTDETISYFVDYFGRRK 165
           L L+ S I   P L++  L+   +AG     F  W    P + H+ E     V    + +
Sbjct: 86  LALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMR 145

Query: 166 DFNS----IHEVLAKGLGVSGDKTLQSTIDRFARAGRHTKLISFFETMEKNYGFKRDKES 225
            F +    I E+      +   +     + RFA A    K +   + M K YG + D+  
Sbjct: 146 QFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPK-YGLEPDEYV 205

Query: 226 LRMVVEKLCENGFASHAEKVVKDLANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYR 285
              +++ LC+NG    A KV +D+  +F P+     +L+ GWC + KL EAK +  +M  
Sbjct: 206 FGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKE 265

Query: 286 GGFELGTPAYNALLDCVCKLCRKKDPFRLQSEAEVVLVEMDYRGVPRNGETFNVLINNLC 345
            G E     +  LL       +  D + L +       +M  RG   N   + VLI  LC
Sbjct: 266 AGLEPDIVVFTNLLSGYAHAGKMADAYDLMN-------DMRKRGFEPNVNCYTVLIQALC 325

Query: 346 KIRK-TSEALNLFHRMGEWGCLPDAETFVILIKSLYQAARTGEGDEMIDRMRSSGYGDAL 405
           +  K   EA+ +F  M  +GC  D  T+  LI    +     +G  ++D MR  G   + 
Sbjct: 326 RTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPS- 385

Query: 406 DKKAYYDFLKILCGIERIDHALIVFEKMKNDGCEPGIKTYDLLMGKFCAHNRLDKANSLY 465
            +  Y   +      E+ +  L + EKMK  GC P +  Y++++   C    + +A  L+
Sbjct: 386 -QVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLW 443

Query: 466 NEAQKRGV 469
           NE +  G+
Sbjct: 446 NEMEANGL 443

[Close]

BLAST of Sed0019900 vs. TAIR 10
Match: AT1G71060.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 130.2 bits (326), Expect = 4.9e-30
Identity = 107/411 (26.03%), Postives = 181/411 (44.04%), Query Frame = 0


Query: 66  SLSHSFFSDSGE-----NDVDQTSQSLAAELLRDPDLDPLPITERLQLSFSHIKPNPELV 125
           +L  SF + S E     ND  Q ++ +   L +  D       E L L+ + +K +P L+
Sbjct: 43  TLYGSFHASSVETQVSANDASQDAERICKILTKFTDSK----VETL-LNEASVKLSPALI 102

Query: 126 LNTLNLASEAGRTVLGFNDWLVSNPDFNHTDETISYFVDYFGRRKDFNSIHEVL--AKGL 185
              L   S AG   L    W  +   F HT    +  ++  G+ K F  I  ++   K  
Sbjct: 103 EEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAK 162

Query: 186 GVSGDKTLQSTIDRFARAGRHTKLISFFETMEKNYGFKRDKESLRMVVEKLCENGFASHA 245
            +   +T      R+ARA +  + I  F  ME+ +GFK +      +++ L ++     A
Sbjct: 163 KLLSKETFALISRRYARARKVKEAIGAFHKMEE-FGFKMESSDFNRMLDTLSKSRNVGDA 222

Query: 246 EKVVKDLANE-FFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTPAYNALLDC 305
           +KV   +  + F PD      L++GW  +  L     +  EM   GFE    AY  +++ 
Sbjct: 223 QKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINA 282

Query: 306 VCKLCRKKDPFRLQSEAEVVLVEMDYRGVPRNGETFNVLINNLCKIRKTSEALNLFHRMG 365
            CK  + ++  R  +       EM+ R    +   F  LIN L   +K ++AL  F R  
Sbjct: 283 HCKAKKYEEAIRFFN-------EMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSK 342

Query: 366 EWGCLPDAETFVILIKSLYQAARTGEGDEMIDRMRSSGYGDALDKKAYYDFLKILCGIER 425
             G   +A T+  L+ +   + R  +  + +D MR  G G   + + Y   L  L  ++R
Sbjct: 343 SSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGP--NARTYDIILHHLIRMQR 402

Query: 426 IDHALIVFEKMKNDGCEPGIKTYDLLMGKFCAHNRLDKANSLYNEAQKRGV 469
              A  V++ M    CEP + TY++++  FC   RLD A  +++E + +GV
Sbjct: 403 SKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGV 435

[Close]

BLAST of Sed0019900 vs. TAIR 10
Match: AT3G62540.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 122.5 bits (306), Expect = 1.0e-27
Identity = 90/403 (22.33%), Postives = 173/403 (42.93%), Query Frame = 0


Query: 102 ITERLQLSFSHIKPNPELVLNTLNLASEAGRTVLGFNDWLVSNPDFNHTDETISYFVDYF 161
           + + ++L  SH     +L++  L     A +    F  W      F H   T +  +   
Sbjct: 151 VLDEMKLDLSH-----DLIVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSIL 210

Query: 162 GRRKDFNSIHEVLAKGLGVSGDKTLQS---TIDRFARAGRHTKLISFFETMEKNYGFKRD 221
            + + F ++  VL + +G  G  T+++    +  FA A    K +  FE M+K Y FK  
Sbjct: 211 AKTRQFETMVSVLEE-MGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKK-YKFKIG 270

Query: 222 KESLRMVVEKLCENGFASHAEKVVKDLANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGE 281
            E++  +++ L        A+ +   L   F P+      L+ GWC    L EA R+  +
Sbjct: 271 VETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWND 330

Query: 282 MYRGGFELGTPAYNALLDCVCKLCRKKDPFRLQSEAEVVLVEMDYRGVPRNGETFNVLIN 341
           M   G +    A+N +L+ + +  +K D  +L          M  +G   N  ++ ++I 
Sbjct: 331 MIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKL-------FHVMKSKGPCPNVRSYTIMIR 390

Query: 342 NLCKIRKTSEALNLFHRMGEWGCLPDAETFVILIKSLYQAARTGEGDEMIDRMRSSGYGD 401
           + CK      A+  F  M + G  PDA  +  LI       +     E++  M+  G+  
Sbjct: 391 DFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPP 450

Query: 402 ALDKKAYYDFLKILCGIERIDHALIVFEKMKNDGCEPGIKTYDLLMGKFCAHNRLDKANS 461
             D K Y   +K++   +  +H   ++ KM  +  EP I T++++M  +      +   +
Sbjct: 451 --DGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRA 510

Query: 462 LYNEAQKRGVPVVSKVYKVDPR-YVAKPKVKKAEKKRETLPEK 501
           +++E  K+G+      Y V  R  +++ K ++A +  E + +K
Sbjct: 511 VWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDK 537

The following BLAST results are available for this feature:

BLAST of Sed0019900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880042.1	6.7e-263	85.58	pentatricopeptide repeat-containing protein PNM1, mitochondrial [Benincasa hispi...	[more]
XP_023531133.1	1.5e-262	86.01	pentatricopeptide repeat-containing protein PNM1, mitochondrial-like [Cucurbita ...	[more]
XP_022933386.1	2.5e-262	86.01	pentatricopeptide repeat-containing protein PNM1, mitochondrial-like [Cucurbita ...	[more]
XP_022966044.1	3.3e-262	85.82	pentatricopeptide repeat-containing protein PNM1, mitochondrial-like [Cucurbita ...	[more]
XP_008453300.1	7.9e-256	83.49	PREDICTED: pentatricopeptide repeat-containing protein PNM1, mitochondrial [Cucu...	[more]

BLAST of Sed0019900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FME4	7.6e-177	59.96	Pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Arabidopsis t...	[more]
Q9FLJ6	1.9e-34	24.22	Pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Arabidop...	[more]
Q9LUJ4	2.6e-31	26.27	Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidop...	[more]
P0C8A0	3.3e-31	26.09	Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana OX...	[more]
Q9C9A2	7.0e-29	26.03	Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidop...	[more]

BLAST of Sed0019900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EYW9	1.2e-262	86.01	pentatricopeptide repeat-containing protein PNM1, mitochondrial-like OS=Cucurbit...	[more]
A0A6J1HLZ2	1.6e-262	85.82	pentatricopeptide repeat-containing protein PNM1, mitochondrial-like OS=Cucurbit...	[more]
A0A5A7UTF6	3.8e-256	83.49	Pentatricopeptide repeat-containing protein PNM1 OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3BVC3	3.8e-256	83.49	pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Cucumis melo ...	[more]
A0A6J1C4U6	9.8e-252	83.36	pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Momordica cha...	[more]

BLAST of Sed0019900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60960.1	5.4e-178	59.96	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G61370.1	1.3e-35	24.22	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G49730.1	2.4e-32	26.09	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G71060.1	4.9e-30	26.03	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G62540.1	1.0e-27	22.33	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 419..447 e-value: 5.3E-4 score: 20.0
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 332..365 e-value: 1.5E-8 score: 32.3 coord: 439..469 e-value: 0.0016 score: 16.5
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 332..375 e-value: 3.3E-12 score: 46.4
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 258..283 e-value: 0.73 score: 10.2
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 252..286 score: 9.097937
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 401..435 score: 9.580234
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 436..470 score: 9.317163
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 329..363 score: 11.849223
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 306..395 e-value: 2.2E-14 score: 55.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 396..523 e-value: 2.9E-11 score: 45.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 150..305 e-value: 8.2E-19 score: 69.6
None	No IPR available	PANTHER	PTHR47932	ATPASE EXPRESSION PROTEIN 3	coord: 48..526
None	No IPR available	PANTHER	PTHR47932:SF13	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PNM1, MITOCHONDRIAL	coord: 48..526

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0019900.1	Sed0019900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding