Sed0019896 (gene) Chayote v1

Overview


Name	Sed0019896
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Location	LG07: 440623 .. 442023 (-)
RNA-Seq Expression	Sed0019896
Synteny	Sed0019896

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACCAACCGAATAAAGCGCGTGAATGTTGGTCTCCACCACACCTTCCCGCCTTTGTCTCACAGATCCATCCATCCATCCACCAGCACTTCTCAATTCAATTCTCCATTCAATCCTAATCCTAATTTTCATTTTGTCCGTTTCTCAAATTGATTCATGGCGGATTTGAAACCGCCGCTCCGGAAGCCCCCTGGCTACAAGGATCCAGACGCCTCCACCATCGCCGCGTTCGCCGTAGAGCCCTTTCCGGCCTCGAAGCCCCCGCCCGCCAGAAACAAGCCTCGCATCCCTGCCTCGTACAAGCCCAAGAAGAGGAAACGCAACTGCTGCAGGATCTGCTGCTGCGTCCTCTGTTTCGTCATTCTATTCCTGGTCGTCGTCGTGGCCCTTGCGGCCGCCCTCTTCTACCTCCTCTTCGACCCCAAGCTCCCCGTCTTCCACCTCCTCTCCTTCCGGATCTCCTCCTTCAAGGTCTCCGCCAAGCCCGACGGATCCTACCTTGCCGCCCAGGTCTCCCTTCGCGTCGAGTTTAACAACCCCAACGACTGCCTCGGGATTCGATACAACAACATTGTGTATGATGTTACGGTGGGGCAGGGGACGGAGTTCGGGCGACGGGAGCTGGCAGGGTTCACACAGGGGAGGAAGAGTACAACCACCGTTAAGGCGGATGCCACCGTAAGGGATAAGATGGTCGGGGTGGAGGACGCAACCAAGCTCATGCCGACTTATCAGACTAAGGCGATGAAGGTGAAAGTGGAGGCAGAGACGGCGGTGGGAGTGCTAGTTCAGGGCTTGGAGGTTGGTCCCGTCGCCGTCAAATTGGATTGCCAAACTACATTGAACAGTATCGAGGCTGGTAATATGCCTCAATGCAACATCAATTTCCTCAGATGGTACGTGTGTAGGTTGTTCATTTTCTTTTTCAATTCAATATACAAATCTTATTAAATTAATAATGTATACAATATCATTTCCTTTTCTCCACCCACCAAACACATAACCTATTATCCTTACTTACACTCACCATTCTTCTTGCTTGTACAATTTATAGTTTCCTTATCGTGGGTTTATTTTTCTTTTTATTGCAGGATCAATATACGTGGATGACATTTTCTTCAAAGACAATTATATTCACTTAAAAAAGGATAATCATTTTCGCTTTTTTTTTTTTAAAAAAAATTTATATTGGATGGAAATTTTTACACATTGATTTGTATTGATAAGTATAATTATATTTTAGGAAGTTAAAATAATTTATTTTAACTCTATACATCAATGCTGTTGTCGACATGTGAAGTATAAGAGGAAAAAAAAATGTAGTGATGCAATGGGTGTGTTTATATCTAAAGTTTGGATGATTGTAATTATAATGTAAAAAGAATGGAGTTTGATTTTGAAAA

mRNA sequence

GACCAACCGAATAAAGCGCGTGAATGTTGGTCTCCACCACACCTTCCCGCCTTTGTCTCACAGATCCATCCATCCATCCACCAGCACTTCTCAATTCAATTCTCCATTCAATCCTAATCCTAATTTTCATTTTGTCCGTTTCTCAAATTGATTCATGGCGGATTTGAAACCGCCGCTCCGGAAGCCCCCTGGCTACAAGGATCCAGACGCCTCCACCATCGCCGCGTTCGCCGTAGAGCCCTTTCCGGCCTCGAAGCCCCCGCCCGCCAGAAACAAGCCTCGCATCCCTGCCTCGTACAAGCCCAAGAAGAGGAAACGCAACTGCTGCAGGATCTGCTGCTGCGTCCTCTGTTTCGTCATTCTATTCCTGGTCGTCGTCGTGGCCCTTGCGGCCGCCCTCTTCTACCTCCTCTTCGACCCCAAGCTCCCCGTCTTCCACCTCCTCTCCTTCCGGATCTCCTCCTTCAAGGTCTCCGCCAAGCCCGACGGATCCTACCTTGCCGCCCAGGTCTCCCTTCGCGTCGAGTTTAACAACCCCAACGACTGCCTCGGGATTCGATACAACAACATTGTGTATGATGTTACGGTGGGGCAGGGGACGGAGTTCGGGCGACGGGAGCTGGCAGGGTTCACACAGGGGAGGAAGAGTACAACCACCGTTAAGGCGGATGCCACCGTAAGGGATAAGATGGTCGGGGTGGAGGACGCAACCAAGCTCATGCCGACTTATCAGACTAAGGCGATGAAGGTGAAAGTGGAGGCAGAGACGGCGGTGGGAGTGCTAGTTCAGGGCTTGGAGGTTGGTCCCGTCGCCGTCAAATTGGATTGCCAAACTACATTGAACAGTATCGAGGCTGGTAATATGCCTCAATGCAACATCAATTTCCTCAGATGGATCAATATACGTGGATGACATTTTCTTCAAAGACAATTATATTCACTTAAAAAAGGATAATCATTTTCGCTTTTTTTTTTTTAAAAAAAATTTATATTGGATGGAAATTTTTACACATTGATTTGTATTGATAAGTATAATTATATTTTAGGAAGTTAAAATAATTTATTTTAACTCTATACATCAATGCTGTTGTCGACATGTGAAGTATAAGAGGAAAAAAAAATGTAGTGATGCAATGGGTGTGTTTATATCTAAAGTTTGGATGATTGTAATTATAATGTAAAAAGAATGGAGTTTGATTTTGAAAA

Coding sequence (CDS)

ATGGCGGATTTGAAACCGCCGCTCCGGAAGCCCCCTGGCTACAAGGATCCAGACGCCTCCACCATCGCCGCGTTCGCCGTAGAGCCCTTTCCGGCCTCGAAGCCCCCGCCCGCCAGAAACAAGCCTCGCATCCCTGCCTCGTACAAGCCCAAGAAGAGGAAACGCAACTGCTGCAGGATCTGCTGCTGCGTCCTCTGTTTCGTCATTCTATTCCTGGTCGTCGTCGTGGCCCTTGCGGCCGCCCTCTTCTACCTCCTCTTCGACCCCAAGCTCCCCGTCTTCCACCTCCTCTCCTTCCGGATCTCCTCCTTCAAGGTCTCCGCCAAGCCCGACGGATCCTACCTTGCCGCCCAGGTCTCCCTTCGCGTCGAGTTTAACAACCCCAACGACTGCCTCGGGATTCGATACAACAACATTGTGTATGATGTTACGGTGGGGCAGGGGACGGAGTTCGGGCGACGGGAGCTGGCAGGGTTCACACAGGGGAGGAAGAGTACAACCACCGTTAAGGCGGATGCCACCGTAAGGGATAAGATGGTCGGGGTGGAGGACGCAACCAAGCTCATGCCGACTTATCAGACTAAGGCGATGAAGGTGAAAGTGGAGGCAGAGACGGCGGTGGGAGTGCTAGTTCAGGGCTTGGAGGTTGGTCCCGTCGCCGTCAAATTGGATTGCCAAACTACATTGAACAGTATCGAGGCTGGTAATATGCCTCAATGCAACATCAATTTCCTCAGATGGATCAATATACGTGGATGA

Protein sequence

MADLKPPLRKPPGYKDPDASTIAAFAVEPFPASKPPPARNKPRIPASYKPKKRKRNCCRICCCVLCFVILFLVVVVALAAALFYLLFDPKLPVFHLLSFRISSFKVSAKPDGSYLAAQVSLRVEFNNPNDCLGIRYNNIVYDVTVGQGTEFGRRELAGFTQGRKSTTTVKADATVRDKMVGVEDATKLMPTYQTKAMKVKVEAETAVGVLVQGLEVGPVAVKLDCQTTLNSIEAGNMPQCNINFLRWINIRG

Homology

[Close]

BLAST of Sed0019896 vs. NCBI nr
Match: XP_022960198.1 (NDR1/HIN1-like protein 6 [Cucurbita moschata] >XP_023515084.1 NDR1/HIN1-like protein 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 352.1 bits (902), Expect = 4.1e-93
Identity = 180/254 (70.87%), Postives = 211/254 (83.07%), Query Frame = 0


Query: 1   MAD--LKPPLRKPPGYKDPDASTIAAFAVEPFPASKPPPARNKPRIPASYKPKKRKRNCC 60
           MAD  LKPPL++PPGYKDP AS  +A      P SKPP ARNKPR+P SYKPKKRK +CC
Sbjct: 1   MADSPLKPPLQRPPGYKDPSASGSSA----SIPVSKPPAARNKPRLPTSYKPKKRKSSCC 60

Query: 61  RICCCVLCFVILFLVVVVALAAALFYLLFDPKLPVFHLLSFRISSFKVSAKPDGSYLAAQ 120
           R+CCCV CF+ILFL+VVV+LA ALFYL+FDPKLP+FHLL+FRISSFKV+  PDGSYL AQ
Sbjct: 61  RLCCCVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQ 120

Query: 121 VSLRVEFNNPNDCLGIRYNNIVYDVTVGQGTEFGRRELAGFTQGRKSTTTVKADATVRDK 180
           VS+RVEF NPND L I+Y  I YDV VGQ  EFG+REL GFTQGR+STTTVKAD+ V+ K
Sbjct: 121 VSIRVEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGK 180

Query: 181 MVGVEDATKLMPTYQTKAMKVKVEAETAVGVLVQGLEVGPVAVKLDCQTTLNSIEAGNMP 240
           M+GVED+T+L+  YQ+KAM+VKVEA TAVGV+ QG  VGP+ VKLDC++ L +IEAG+MP
Sbjct: 181 MLGVEDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDMP 240

Query: 241 QCNINFLRWINIRG 253
            CNIN LRWINIRG
Sbjct: 241 TCNINLLRWINIRG 250

[Close]

BLAST of Sed0019896 vs. NCBI nr
Match: XP_023005046.1 (NDR1/HIN1-like protein 13 [Cucurbita maxima])

HSP 1 Score: 351.7 bits (901), Expect = 5.4e-93
Identity = 180/254 (70.87%), Postives = 211/254 (83.07%), Query Frame = 0


Query: 1   MAD--LKPPLRKPPGYKDPDASTIAAFAVEPFPASKPPPARNKPRIPASYKPKKRKRNCC 60
           MAD  LKPPL++PPGYKDP AS  +A      P SKPP ARNKPR+P SYKPKKRK +CC
Sbjct: 85  MADSPLKPPLQRPPGYKDPSASGSSA----SIPVSKPPAARNKPRLPTSYKPKKRKSSCC 144

Query: 61  RICCCVLCFVILFLVVVVALAAALFYLLFDPKLPVFHLLSFRISSFKVSAKPDGSYLAAQ 120
           R+CCCV CF+ILFL+VVV+LA ALFYL+FDPKLP+FHLL+FRISSFKV+  PDGSYL AQ
Sbjct: 145 RLCCCVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQ 204

Query: 121 VSLRVEFNNPNDCLGIRYNNIVYDVTVGQGTEFGRRELAGFTQGRKSTTTVKADATVRDK 180
           VS+RVEF NPND L IRY  I YDV VGQ  EFG+REL GFTQ R+STTTVKAD+ V+ K
Sbjct: 205 VSIRVEFKNPNDKLAIRYGKIEYDVMVGQAAEFGQRELQGFTQARRSTTTVKADSGVKGK 264

Query: 181 MVGVEDATKLMPTYQTKAMKVKVEAETAVGVLVQGLEVGPVAVKLDCQTTLNSIEAGNMP 240
           M+GVED+T+L+  YQ+KAM+VKVEA TAVGV+ QG  VGP++VKLDC++ L +IEAG+MP
Sbjct: 265 MLGVEDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPISVKLDCESKLKNIEAGDMP 324

Query: 241 QCNINFLRWINIRG 253
            CNIN LRWINIRG
Sbjct: 325 TCNINLLRWINIRG 334

[Close]

BLAST of Sed0019896 vs. NCBI nr
Match: KAG6592899.1 (NDR1/HIN1-like protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 348.2 bits (892), Expect = 5.9e-92
Identity = 178/253 (70.36%), Postives = 210/253 (83.00%), Query Frame = 0


Query: 1   MAD--LKPPLRKPPGYKDPDASTIAAFAVEPFPASKPPPARNKPRIPASYKPKKRKRNCC 60
           MAD  LKPPL++PPGYKDP AS  +A      P SKPP ARNKPR+P SYKPKKRK +CC
Sbjct: 1   MADSPLKPPLQRPPGYKDPSASGSSA----SIPVSKPPAARNKPRLPTSYKPKKRKSSCC 60

Query: 61  RICCCVLCFVILFLVVVVALAAALFYLLFDPKLPVFHLLSFRISSFKVSAKPDGSYLAAQ 120
           R+CCCV CF+ILFL+VVV+LA ALFYL+FDPKLP+FHLL+FRISSFKV+  PDGSYL AQ
Sbjct: 61  RLCCCVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQ 120

Query: 121 VSLRVEFNNPNDCLGIRYNNIVYDVTVGQGTEFGRRELAGFTQGRKSTTTVKADATVRDK 180
           VS+RVEF NPND L I+Y  I YDV VGQ  EFG+REL GFTQGR+STTTVKAD+ V+ K
Sbjct: 121 VSIRVEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGK 180

Query: 181 MVGVEDATKLMPTYQTKAMKVKVEAETAVGVLVQGLEVGPVAVKLDCQTTLNSIEAGNMP 240
           M+GVED+T+L+  YQ+KAM+VKVEA TAVGV+ QG  VGP+ VKLDC++ L +IEAG+MP
Sbjct: 181 MLGVEDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDMP 240

Query: 241 QCNINFLRWINIR 252
            CNIN LRWINI+
Sbjct: 241 TCNINLLRWINIQ 249

[Close]

BLAST of Sed0019896 vs. NCBI nr
Match: XP_008445748.1 (PREDICTED: uncharacterized protein LOC103488682 [Cucumis melo])

HSP 1 Score: 340.9 bits (873), Expect = 9.5e-90
Identity = 172/254 (67.72%), Postives = 208/254 (81.89%), Query Frame = 0


Query: 1   MADL--KPPLRKPPGYKDPDASTIAAFAVEPFPASKPPPARNKPRIPASYKPKKRKRNCC 60
           MADL  KPPL+KPPGYKD   +  ++ +        PPP R+KPR+P+SYKPKKRKRNCC
Sbjct: 1   MADLPMKPPLQKPPGYKDHHTAATSSSSASTV-THLPPPPRSKPRLPSSYKPKKRKRNCC 60

Query: 61  RICCCVLCFVILFLVVVVALAAALFYLLFDPKLPVFHLLSFRISSFKVSAKPDGSYLAAQ 120
           R CCC+ CF+ILFL+VV ALA ALFYL++DPKLPVFHLL+FRIS+FKVSA PDGS+L AQ
Sbjct: 61  RTCCCIFCFLILFLIVVAALALALFYLIYDPKLPVFHLLAFRISTFKVSATPDGSFLDAQ 120

Query: 121 VSLRVEFNNPNDCLGIRYNNIVYDVTVGQGTEFGRRELAGFTQGRKSTTTVKADATVRDK 180
           VS+RVEF NPND L I+Y  I YDV VGQ TEFGRRELAGFTQ R+STTTVKA+A V++K
Sbjct: 121 VSIRVEFKNPNDKLSIKYGKIEYDVMVGQATEFGRRELAGFTQDRRSTTTVKAEAAVKNK 180

Query: 181 MVGVEDATKLMPTYQTKAMKVKVEAETAVGVLVQGLEVGPVAVKLDCQTTLNSIEAGNMP 240
           M+ VED  +L+  +Q+KA++VKVEAETAVGV++QG  +GP+ VKLDC+T L +IE G+MP
Sbjct: 181 MLAVEDGARLLSKFQSKALEVKVEAETAVGVVIQGWGLGPITVKLDCETKLKNIEGGDMP 240

Query: 241 QCNINFLRWINIRG 253
            CNIN LRWINIRG
Sbjct: 241 ICNINLLRWINIRG 253

[Close]

BLAST of Sed0019896 vs. NCBI nr
Match: XP_038886533.1 (NDR1/HIN1-like protein 6 [Benincasa hispida])

HSP 1 Score: 340.5 bits (872), Expect = 1.2e-89
Identity = 171/248 (68.95%), Postives = 207/248 (83.47%), Query Frame = 0


Query: 5   KPPLRKPPGYKDPDASTIAAFAVEPFPASKPPPARNKPRIPASYKPKKRKRNCCRICCCV 64
           KPPL+KPPGYKDP+ S  ++ +  P     PP  RNKPR+P+SYKPK+R+RNCCR CCCV
Sbjct: 8   KPPLQKPPGYKDPNPSGSSSTSSAP---HLPPATRNKPRLPSSYKPKRRRRNCCRTCCCV 67

Query: 65  LCFVILFLVVVVALAAALFYLLFDPKLPVFHLLSFRISSFKVSAKPDGSYLAAQVSLRVE 124
            CF+ILFL+VV ALA ALFYL++DPKLPVFHLL+FRISSFKVSA PDGS+L AQVS+RVE
Sbjct: 68  FCFLILFLIVVAALAIALFYLIYDPKLPVFHLLAFRISSFKVSATPDGSFLDAQVSIRVE 127

Query: 125 FNNPNDCLGIRYNNIVYDVTVGQGTEFGRRELAGFTQGRKSTTTVKADATVRDKMVGVED 184
           F NPND L IRY  I YDVTVGQ T+FGRRELAGFTQGR+STTTVKA+A V++KM+ VED
Sbjct: 128 FKNPNDKLAIRYGAIEYDVTVGQSTDFGRRELAGFTQGRRSTTTVKAEAAVKNKMLAVED 187

Query: 185 ATKLMPTYQTKAMKVKVEAETAVGVLVQGLEVGPVAVKLDCQTTLNSIEAGNMPQCNINF 244
             +L+  +Q+K+M+VKVEAET VGV++QG  +GP+ VKLDC++ L +IE G+MP CNIN 
Sbjct: 188 GARLLSRFQSKSMEVKVEAETTVGVVLQGWGLGPINVKLDCESKLKNIEDGDMPICNINL 247

Query: 245 LRWINIRG 253
           LRWINIRG
Sbjct: 248 LRWINIRG 252

[Close]

BLAST of Sed0019896 vs. ExPASy Swiss-Prot
Match: Q8LD98 (NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 4.0e-06
Identity = 57/232 (24.57%), Postives = 99/232 (42.67%), Query Frame = 0


Query: 15  KDPDASTIAAFA---------VEPFPASKPPPARNKPRIPASYKPKKRKRNCCRICCCVL 74
           +DP+A+T    A          E    SK P  +   R      PKKR+  CCR  C   
Sbjct: 11  QDPEAATARPTAPLVPRGSSRSEHGDPSKVPLNQRPQRFVPLAPPKKRRSCCCRCFCYTF 70

Query: 75  CFVILFLVVVVALAAALFYLLFDPKLPVFHLLSFRISSFKVSAKPDGSYLAAQVSLRVEF 134
           CF++L LVV V  +  + YL+F PKLP + +   +++ F ++     S L    ++ +  
Sbjct: 71  CFLLL-LVVAVGASIGILYLVFKPKLPDYSIDRLQLTRFALN---QDSSLTTAFNVTITA 130

Query: 135 NNPNDCLGIRYNNIVYDVTVGQGTEFGRRELAGFTQGRKSTTTVKADATVRDKMVGVEDA 194
            NPN+ +GI Y +           +     L  F QG ++TT +  + T + +       
Sbjct: 131 KNPNEKIGIYYEDGSKITVWYMEHQLSNGSLPKFYQGHENTTVIYVEMTGQTQNASGLRT 190

Query: 195 TKLMPTYQTKAMKVKVEAETAVGVLVQGLEVGPVAVKLDCQTTLNSIEAGNM 238
           T      +T  + +++     V V    L++  V   + C   ++S+   N+
Sbjct: 191 TLEEQQQRTGNIPLRIRVNQPVRVKFGKLKLFEVRFLVRCGVFVDSLATNNV 238

[Close]

BLAST of Sed0019896 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 8.2e-04
Identity = 44/139 (31.65%), Postives = 67/139 (48.20%), Query Frame = 0


Query: 33  SKPPPARNKPRIPASYKPKKRKRNCCRICCCVLCF--VILFLVVVVALAAALFYLLFDPK 92
           S PPPA      P  Y  +   R C   CC +  F  VI+ L+V++ +AA +F+L+  P+
Sbjct: 15  SVPPPA------PKGYYRRGHGRGCG--CCLLSLFVKVIISLIVILGVAALIFWLIVRPR 74

Query: 93  LPVFHLLSFRISSFKVSAKPDGSYLAAQVSLRVEFNNPNDCLGIRYNNIVYDVTVGQGTE 152
              FH+    ++ F     PD + L   ++L V   NPN  +G+ Y+ I       +G  
Sbjct: 75  AIKFHVTDASLTRFD-HTSPD-NILRYNLALTVPVRNPNKRIGLYYDRIEAHAYY-EGKR 134

Query: 153 FGRRELAGFTQGRKSTTTV 170
           F    L  F QG K+TT +
Sbjct: 135 FSTITLTPFYQGHKNTTVL 142

[Close]

BLAST of Sed0019896 vs. ExPASy TrEMBL
Match: A0A6J1H856 (NDR1/HIN1-like protein 6 OS=Cucurbita moschata OX=3662 GN=LOC111461008 PE=4 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 2.0e-93
Identity = 180/254 (70.87%), Postives = 211/254 (83.07%), Query Frame = 0


Query: 1   MAD--LKPPLRKPPGYKDPDASTIAAFAVEPFPASKPPPARNKPRIPASYKPKKRKRNCC 60
           MAD  LKPPL++PPGYKDP AS  +A      P SKPP ARNKPR+P SYKPKKRK +CC
Sbjct: 1   MADSPLKPPLQRPPGYKDPSASGSSA----SIPVSKPPAARNKPRLPTSYKPKKRKSSCC 60

Query: 61  RICCCVLCFVILFLVVVVALAAALFYLLFDPKLPVFHLLSFRISSFKVSAKPDGSYLAAQ 120
           R+CCCV CF+ILFL+VVV+LA ALFYL+FDPKLP+FHLL+FRISSFKV+  PDGSYL AQ
Sbjct: 61  RLCCCVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQ 120

Query: 121 VSLRVEFNNPNDCLGIRYNNIVYDVTVGQGTEFGRRELAGFTQGRKSTTTVKADATVRDK 180
           VS+RVEF NPND L I+Y  I YDV VGQ  EFG+REL GFTQGR+STTTVKAD+ V+ K
Sbjct: 121 VSIRVEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGK 180

Query: 181 MVGVEDATKLMPTYQTKAMKVKVEAETAVGVLVQGLEVGPVAVKLDCQTTLNSIEAGNMP 240
           M+GVED+T+L+  YQ+KAM+VKVEA TAVGV+ QG  VGP+ VKLDC++ L +IEAG+MP
Sbjct: 181 MLGVEDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGDMP 240

Query: 241 QCNINFLRWINIRG 253
            CNIN LRWINIRG
Sbjct: 241 TCNINLLRWINIRG 250

[Close]

BLAST of Sed0019896 vs. ExPASy TrEMBL
Match: A0A6J1KTU7 (NDR1/HIN1-like protein 13 OS=Cucurbita maxima OX=3661 GN=LOC111498155 PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 2.6e-93
Identity = 180/254 (70.87%), Postives = 211/254 (83.07%), Query Frame = 0


Query: 1   MAD--LKPPLRKPPGYKDPDASTIAAFAVEPFPASKPPPARNKPRIPASYKPKKRKRNCC 60
           MAD  LKPPL++PPGYKDP AS  +A      P SKPP ARNKPR+P SYKPKKRK +CC
Sbjct: 85  MADSPLKPPLQRPPGYKDPSASGSSA----SIPVSKPPAARNKPRLPTSYKPKKRKSSCC 144

Query: 61  RICCCVLCFVILFLVVVVALAAALFYLLFDPKLPVFHLLSFRISSFKVSAKPDGSYLAAQ 120
           R+CCCV CF+ILFL+VVV+LA ALFYL+FDPKLP+FHLL+FRISSFKV+  PDGSYL AQ
Sbjct: 145 RLCCCVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQ 204

Query: 121 VSLRVEFNNPNDCLGIRYNNIVYDVTVGQGTEFGRRELAGFTQGRKSTTTVKADATVRDK 180
           VS+RVEF NPND L IRY  I YDV VGQ  EFG+REL GFTQ R+STTTVKAD+ V+ K
Sbjct: 205 VSIRVEFKNPNDKLAIRYGKIEYDVMVGQAAEFGQRELQGFTQARRSTTTVKADSGVKGK 264

Query: 181 MVGVEDATKLMPTYQTKAMKVKVEAETAVGVLVQGLEVGPVAVKLDCQTTLNSIEAGNMP 240
           M+GVED+T+L+  YQ+KAM+VKVEA TAVGV+ QG  VGP++VKLDC++ L +IEAG+MP
Sbjct: 265 MLGVEDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPISVKLDCESKLKNIEAGDMP 324

Query: 241 QCNINFLRWINIRG 253
            CNIN LRWINIRG
Sbjct: 325 TCNINLLRWINIRG 334

[Close]

BLAST of Sed0019896 vs. ExPASy TrEMBL
Match: A0A1S3BDG3 (uncharacterized protein LOC103488682 OS=Cucumis melo OX=3656 GN=LOC103488682 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 4.6e-90
Identity = 172/254 (67.72%), Postives = 208/254 (81.89%), Query Frame = 0


Query: 1   MADL--KPPLRKPPGYKDPDASTIAAFAVEPFPASKPPPARNKPRIPASYKPKKRKRNCC 60
           MADL  KPPL+KPPGYKD   +  ++ +        PPP R+KPR+P+SYKPKKRKRNCC
Sbjct: 1   MADLPMKPPLQKPPGYKDHHTAATSSSSASTV-THLPPPPRSKPRLPSSYKPKKRKRNCC 60

Query: 61  RICCCVLCFVILFLVVVVALAAALFYLLFDPKLPVFHLLSFRISSFKVSAKPDGSYLAAQ 120
           R CCC+ CF+ILFL+VV ALA ALFYL++DPKLPVFHLL+FRIS+FKVSA PDGS+L AQ
Sbjct: 61  RTCCCIFCFLILFLIVVAALALALFYLIYDPKLPVFHLLAFRISTFKVSATPDGSFLDAQ 120

Query: 121 VSLRVEFNNPNDCLGIRYNNIVYDVTVGQGTEFGRRELAGFTQGRKSTTTVKADATVRDK 180
           VS+RVEF NPND L I+Y  I YDV VGQ TEFGRRELAGFTQ R+STTTVKA+A V++K
Sbjct: 121 VSIRVEFKNPNDKLSIKYGKIEYDVMVGQATEFGRRELAGFTQDRRSTTTVKAEAAVKNK 180

Query: 181 MVGVEDATKLMPTYQTKAMKVKVEAETAVGVLVQGLEVGPVAVKLDCQTTLNSIEAGNMP 240
           M+ VED  +L+  +Q+KA++VKVEAETAVGV++QG  +GP+ VKLDC+T L +IE G+MP
Sbjct: 181 MLAVEDGARLLSKFQSKALEVKVEAETAVGVVIQGWGLGPITVKLDCETKLKNIEGGDMP 240

Query: 241 QCNINFLRWINIRG 253
            CNIN LRWINIRG
Sbjct: 241 ICNINLLRWINIRG 253

[Close]

BLAST of Sed0019896 vs. ExPASy TrEMBL
Match: A0A0A0KCD8 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G042460 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 1.1e-88
Identity = 171/254 (67.32%), Postives = 207/254 (81.50%), Query Frame = 0


Query: 1   MAD--LKPPLRKPPGYKDPDASTIAAFAVEPFPASKPPPARNKPRIPASYKPKKRKRNCC 60
           MAD  LKPPL+KPPGYKD + +  ++ +        PPP R KPR P+SYKPKKRKRNCC
Sbjct: 1   MADLPLKPPLQKPPGYKDHNTTATSSSSAST-ATHLPPPLRPKPRPPSSYKPKKRKRNCC 60

Query: 61  RICCCVLCFVILFLVVVVALAAALFYLLFDPKLPVFHLLSFRISSFKVSAKPDGSYLAAQ 120
           R CCC+ CF+ILFL+VV ALA ALFYLL+DPKLPVFHLL+FRISSFKVS  PDGS+L +Q
Sbjct: 61  RTCCCIFCFLILFLIVVAALALALFYLLYDPKLPVFHLLAFRISSFKVSTTPDGSFLDSQ 120

Query: 121 VSLRVEFNNPNDCLGIRYNNIVYDVTVGQGTEFGRRELAGFTQGRKSTTTVKADATVRDK 180
           VS+RVEF NPN+ L I+Y  I YDVTVGQ TEFGRRELAGFTQGR+STTTVKA+A V++K
Sbjct: 121 VSIRVEFKNPNEKLSIKYGKIEYDVTVGQATEFGRRELAGFTQGRRSTTTVKAEAAVKNK 180

Query: 181 MVGVEDATKLMPTYQTKAMKVKVEAETAVGVLVQGLEVGPVAVKLDCQTTLNSIEAGNMP 240
           M+ VED  +L+  +Q+KA++VKVEAET VGV+VQG  +GP+ VKLDC++ L +I+ G+MP
Sbjct: 181 MLAVEDGGRLLSKFQSKALEVKVEAETEVGVVVQGWGLGPITVKLDCESKLKNIDGGDMP 240

Query: 241 QCNINFLRWINIRG 253
            CNIN LRWINIRG
Sbjct: 241 TCNINLLRWINIRG 253

[Close]

BLAST of Sed0019896 vs. ExPASy TrEMBL
Match: A0A5D3DEK8 (Protein YLS9 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold482G00040 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 6.8e-86
Identity = 166/248 (66.94%), Postives = 202/248 (81.45%), Query Frame = 0


Query: 1   MADL--KPPLRKPPGYKDPDASTIAAFAVEPFPASKPPPARNKPRIPASYKPKKRKRNCC 60
           MADL  KPPL+KPPGYKD   +  ++ +        PPP R+KPR+P+SYKPKKRKRNCC
Sbjct: 1   MADLPMKPPLQKPPGYKDHHTAATSSSSASTV-THLPPPPRSKPRLPSSYKPKKRKRNCC 60

Query: 61  RICCCVLCFVILFLVVVVALAAALFYLLFDPKLPVFHLLSFRISSFKVSAKPDGSYLAAQ 120
           R CCC+ CF+ILFL+VV ALA ALFYL++DPKLPVFHLL+FRIS+FKVSA PDGS+L AQ
Sbjct: 61  RTCCCIFCFLILFLIVVAALALALFYLIYDPKLPVFHLLAFRISTFKVSATPDGSFLDAQ 120

Query: 121 VSLRVEFNNPNDCLGIRYNNIVYDVTVGQGTEFGRRELAGFTQGRKSTTTVKADATVRDK 180
           VS+RVEF NPND L I+Y  I YDV VGQ TEFGRRELAGFTQ R+STTTVKA+A V++K
Sbjct: 121 VSIRVEFKNPNDKLSIKYGKIEYDVMVGQATEFGRRELAGFTQDRRSTTTVKAEAAVKNK 180

Query: 181 MVGVEDATKLMPTYQTKAMKVKVEAETAVGVLVQGLEVGPVAVKLDCQTTLNSIEAGNMP 240
           M+ VED  +L+  +Q+KA++VKVEAETAVGV++QG  +GP+ VKLDC+T L +IE G+MP
Sbjct: 181 MLAVEDGARLLSKFQSKALEVKVEAETAVGVVIQGWGLGPITVKLDCETKLKNIEGGDMP 240

Query: 241 QCNINFLR 247
            CNIN LR
Sbjct: 241 ICNINLLR 247

[Close]

BLAST of Sed0019896 vs. TAIR 10
Match: AT2G46300.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 182.2 bits (461), Expect = 5.2e-46
Identity = 104/262 (39.69%), Postives = 160/262 (61.07%), Query Frame = 0


Query: 1   MAD--LKPPLRKPPGYKDPDASTIAAFAVEPFPASKPPPARNKPR-----IPASYKPKKR 60
           MAD  + P L+KPPGY+DP+ S+         P   PPP + +P      +P SY+PKK+
Sbjct: 1   MADYQMNPVLQKPPGYRDPNMSS---------PPPPPPPIQQQPMRKAVPMPTSYRPKKK 60

Query: 61  KRNCCRICCCVLCFVILFLVVVVALAAALFYLLFDPKLPVFHLLSFRISSFKVSAKPDGS 120
           +R+CCR CCC +C  ++  + ++ +  A+FYL FDPKLP F L SFR+  FK++  PDG+
Sbjct: 61  RRSCCRFCCCCICITLVLFIFLLLVGTAVFYLWFDPKLPTFSLASFRLDGFKLADDPDGA 120

Query: 121 YLAAQVSLRVEFNNPNDCLGIRYNNIVYDVTVGQG---TEFGRRELAGFTQGRKSTTTVK 180
            L+A    RVE  NPN  L   Y N   D++VG G   T  G   + GF QG K++T+VK
Sbjct: 121 SLSATAVARVEMKNPNSKLVFYYGNTAVDLSVGSGNDETGMGETTMNGFRQGPKNSTSVK 180

Query: 181 ADATVRDKMVGVEDATKLMPTYQTKAMKVKVEAETAVGVLVQGLEVGPVAVKLDC-QTTL 240
            + TV++++V    A +L   +Q+K + + V A+T VG+ V G+++G +AV L C   +L
Sbjct: 181 VETTVKNQLVERGLAKRLAAKFQSKDLVINVVAKTKVGLGVGGIKIGMLAVNLRCGGVSL 240

Query: 241 NSIEAGNMPQCNINFLRWINIR 252
           N ++  + P+C +N L+W+ I+
Sbjct: 241 NKLDT-DSPKCILNTLKWVTIQ 252

[Close]

BLAST of Sed0019896 vs. TAIR 10
Match: AT4G01110.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G01453.1); Has 273 Blast hits to 272 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 273; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 112.1 bits (279), Expect = 6.7e-25
Identity = 81/256 (31.64%), Postives = 131/256 (51.17%), Query Frame = 0


Query: 4   LKPPLRKPPGYKDPDASTIAAFAVEPFPAS--KPPPARNKPRIPASYKP-KKRKRNCCRI 63
           LKP L+KPPGY++  +            +S  + PP   K  IPA++ P KKR+ + CR+
Sbjct: 7   LKPVLQKPPGYRELHSQPQTPLGSSSSSSSMLRRPP---KHAIPAAFYPTKKRQWSRCRV 66

Query: 64  CCCVLCFVILFLVVVVALAAALFYLLFDPKLPVFHLLSFRISSFKVSAKPDG---SYLAA 123
            CC +C  +  +++++ L  ++F+L + P+LPV  L SFR+S+F  S    G   S L A
Sbjct: 67  FCCCVCITVAIVILLLILTVSVFFLYYSPRLPVVRLSSFRVSNFNFSGGKAGDGLSQLTA 126

Query: 124 QVSLRVEFNNPNDCLGIRYNNIVYDVTVGQG---TEFGRRELAGFTQGRKSTTTVKADAT 183
           + + R++F NPN  L   Y N+   V+VG+    T  G  ++ GF +   + T V     
Sbjct: 127 EATARLDFRNPNGKLRYYYGNVDVAVSVGEDDFETSLGSTKVKGFVEKPGNRTVVIVPIK 186

Query: 184 VRDKMVGVEDATKLMPTYQTKAMKVKVEAETAVGVLVQGLEVGPVAVKLDCQTTLNSIEA 243
           V+ + V      +L    ++K + VKV A+T VG+ V   ++  V V + C         
Sbjct: 187 VKKQQVDDPTVKRLRADMKSKKLVVKVMAKTKVGLGVGRRKIVTVGVTISCGGVRLQTLD 246

Query: 244 GNMPQCNINFLRWINI 251
             M +C I  L+WI +
Sbjct: 247 SKMSKCTIKMLKWIKL 259

[Close]

BLAST of Sed0019896 vs. TAIR 10
Match: AT1G01453.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 110.9 bits (276), Expect = 1.5e-24
Identity = 83/254 (32.68%), Postives = 129/254 (50.79%), Query Frame = 0


Query: 4   LKPPLRKPPGYKDPDASTIAAFAVEPFPASKPPPARNKPRIPASYKPKKRKRNCCRICCC 63
           L+P L+KPPG++D      A     P   +  P  R +P  PA    KKR+ + CR+ CC
Sbjct: 20  LQPALQKPPGFRDQQNQPSA----PPSGTATLPRRRPRPIHPAD---KKRRCSFCRVFCC 79

Query: 64  VLCFVILFLVVVVALAAALFYLLFDPKLPVFHLLSFRISSFKVS--AKPDG-SYLAAQVS 123
            +C +   +++++ +A A+F+L + PKLPV  L SF+IS+F  S     DG S+L+A  +
Sbjct: 80  CVCILFAVILLLILIAVAVFFLWYSPKLPVVRLASFKISNFNFSDGKSDDGWSFLSADTT 139

Query: 124 LRVEFNNPNDCLGIRYNNIVYDVTVGQ---GTEFGRRELAGFTQGRKSTTTVKADATVRD 183
             ++F NPN  L   Y +    V +G+    T     ++ GF +   + T V    TVR 
Sbjct: 140 SVLDFRNPNGKLTFYYGDTDVAVILGEKDFETNLESTKVKGFIEKPGNRTAVIVPTTVRK 199

Query: 184 KMVGVEDATKLMPTYQTKAMKVKVEAETAVGVLVQGLEVGPVAVKLDCQTTLNSIEAGNM 243
           + V    A +L    ++K + V V A+T VG+ V   ++  V V L C   +       M
Sbjct: 200 RQVDDPTAKRLQVELKSKKLLVTVTAKTKVGLAVGSRKIVTVGVSLRCGGVILQTLDSKM 259

Query: 244 PQCNINFLRWINIR 252
            QC I  L+WI +R
Sbjct: 260 AQCTIKMLKWIKLR 266

[Close]

BLAST of Sed0019896 vs. TAIR 10
Match: AT1G01453.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 106.3 bits (264), Expect = 3.7e-23
Identity = 81/250 (32.40%), Postives = 126/250 (50.40%), Query Frame = 0


Query: 4   LKPPLRKPPGYKDPDASTIAAFAVEPFPASKPPPARNKPRIPASYKPKKRKRNCCRICCC 63
           L+P L+KPPG++D      A     P   +  P  R +P  PA    KKR+ + CR+ CC
Sbjct: 20  LQPALQKPPGFRDQQNQPSA----PPSGTATLPRRRPRPIHPAD---KKRRCSFCRVFCC 79

Query: 64  VLCFVILFLVVVVALAAALFYLLFDPKLPVFHLLSFRISSFKVS--AKPDG-SYLAAQVS 123
            +C +   +++++ +A A+F+L + PKLPV  L SF+IS+F  S     DG S+L+A  +
Sbjct: 80  CVCILFAVILLLILIAVAVFFLWYSPKLPVVRLASFKISNFNFSDGKSDDGWSFLSADTT 139

Query: 124 LRVEFNNPNDCLGIRYNNIVYDVTVGQ---GTEFGRRELAGFTQGRKSTTTVKADATVRD 183
             ++F NPN  L   Y +    V +G+    T     ++ GF +   + T V    TVR 
Sbjct: 140 SVLDFRNPNGKLTFYYGDTDVAVILGEKDFETNLESTKVKGFIEKPGNRTAVIVPTTVRK 199

Query: 184 KMVGVEDATKLMPTYQTKAMKVKVEAETAVGVLVQGLEVGPVAVKLDCQTTLNSIEAGNM 243
           + V    A +L    ++K + V V A+T VG+ V   ++  V V L C   +       M
Sbjct: 200 RQVDDPTAKRLQVELKSKKLLVTVTAKTKVGLAVGSRKIVTVGVSLRCGGVILQTLDSKM 259

Query: 244 PQCNINFLRW 248
            QC I  L+W
Sbjct: 260 AQCTIKMLKW 262

[Close]

BLAST of Sed0019896 vs. TAIR 10
Match: AT1G17620.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 65.1 bits (157), Expect = 9.3e-11
Identity = 66/231 (28.57%), Postives = 110/231 (47.62%), Query Frame = 0


Query: 7   PLRKPPGYKDPDASTIAAFAVEPFPASKPPPAR-NKP--RIPASYKPKKRKRNCCRICCC 66
           P  KPP      A T        FPA+K      N+P  R PA  +     R CC  CCC
Sbjct: 8   PASKPPAIVGGGAPT----TNPTFPANKAQLYNANRPAYRPPAGRRRTSHTRGCCCRCCC 67

Query: 67  VLCFVILFLVVVVALAAALFYLLFDPKLPVFHLLSFRISSFKVSAKPDGSYLAAQVSLRV 126
              FVI+ L+++VA A+A+ YL++ P+ P F +   +IS+   ++      L   +SL V
Sbjct: 68  WTIFVIILLLLIVAAASAVVYLIYRPQRPSFTVSELKISTLNFTS---AVRLTTAISLSV 127

Query: 127 EFNNPNDCLGIRYNNIVYDVTVGQGTE-------FGRRELAGFTQGRKSTTTVKADATVR 186
              NPN  +G  Y+  V D+T+ + +         G+  +A F+ G+K+TTT+++     
Sbjct: 128 IARNPNKNVGFIYD--VTDITLYKASTGGDDDVVIGKGTIAAFSHGKKNTTTLRSTIGSP 187

Query: 187 DKMVGVEDATKLMPTYQT-KAMKVKVEAETAVGVLVQGLEVGPVAVKLDCQ 227
              +    A KL    +  KA+ +K+   + V V +  L+     +++ C+
Sbjct: 188 PDELDEISAGKLKGDLKAKKAVAIKIVLNSKVKVKMGALKTPKSGIRVTCE 229

The following BLAST results are available for this feature:

BLAST of Sed0019896 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022960198.1	4.1e-93	70.87	NDR1/HIN1-like protein 6 [Cucurbita moschata] >XP_023515084.1 NDR1/HIN1-like pro...	[more]
XP_023005046.1	5.4e-93	70.87	NDR1/HIN1-like protein 13 [Cucurbita maxima]	[more]
KAG6592899.1	5.9e-92	70.36	NDR1/HIN1-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_008445748.1	9.5e-90	67.72	PREDICTED: uncharacterized protein LOC103488682 [Cucumis melo]	[more]
XP_038886533.1	1.2e-89	68.95	NDR1/HIN1-like protein 6 [Benincasa hispida]	[more]

BLAST of Sed0019896 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LD98	4.0e-06	24.57	NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1	[more]
Q9SJ52	8.2e-04	31.65	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]

BLAST of Sed0019896 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H856	2.0e-93	70.87	NDR1/HIN1-like protein 6 OS=Cucurbita moschata OX=3662 GN=LOC111461008 PE=4 SV=1	[more]
A0A6J1KTU7	2.6e-93	70.87	NDR1/HIN1-like protein 13 OS=Cucurbita maxima OX=3661 GN=LOC111498155 PE=4 SV=1	[more]
A0A1S3BDG3	4.6e-90	67.72	uncharacterized protein LOC103488682 OS=Cucumis melo OX=3656 GN=LOC103488682 PE=...	[more]
A0A0A0KCD8	1.1e-88	67.32	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G042460 PE=4 ...	[more]
A0A5D3DEK8	6.8e-86	66.94	Protein YLS9 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Sed0019896 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G46300.1	5.2e-46	39.69	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT4G01110.1	6.7e-25	31.64	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G01453.1	1.5e-24	32.68	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G01453.2	3.7e-23	32.40	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G17620.1	9.3e-11	28.57	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 123..209 e-value: 6.6E-9 score: 36.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..49
None	No IPR available	PANTHER	PTHR31234	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 1..247
None	No IPR available	PANTHER	PTHR31234:SF35	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 1..247

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0019896.1	Sed0019896.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane