Sed0019890 (gene) Chayote v1

Overview
NameSed0019890
Typegene
OrganismSechium edule (Chayote v1)
DescriptionDNA mismatch repair protein
LocationLG11: 836729 .. 847320 (+)
RNA-Seq ExpressionSed0019890
SyntenySed0019890
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCCCTTCAAAAAACAAAATGTTGAGAACAAAACCTTCAAATCCTCTCCAATGGAGGCGCCTCTCTCCTCCTCCTCTTCCTCCCTCACCTTCTCCACTCCTCTAATGGCGACGTCGGCACCGCCTTACATATTCCCCGCCGTATTCTCAGAAGAATTCCAAAATCAATTTTAGAATTTCGGTTTCGAATTTAGGGTTTTGAGATTTGTTTGTTTGGTATTAGATACTGTGTCATTCAATATGGAATCTTGAAATTTATTGATTCTGATATCATATTAAATAGTATGAACATTAATCTCAAAATTAATCGAAAACGAGAGAGGAATGAGTTGTCAACATTTTTTTATATGACTCACTCTTTCAATATCCTAAGATTTTTTTTTTTATTTTTATTGTTTAAGAGTGTGACATTCGATGTGAGATCCTAAGATGGTACTTCTTTTAGTCGAATATCGACTTAGATTTACTATTTCTATAATATATTAGACAATGTCCAATTGATTAACGAGAGAAAAAAAAAGTAGTCTACTTTTCTTATATATTGCCGAGAAATATCCCTCTCAGCCTCCGTTTGTTGCAGCGACAGCCTGTTTGGGCGACAATTTGAGCGAGTTCCCGACGAGCAATTTGTTTGCGGCGGCGGGAGATGGGATATGGGAGAACGGGGCGGCGTGCGGGAGGCAGTGTATTACGTAAGGTGTTTCAGTGCGTCGGAGCCGGAGGCGTGCGTGCCGGATCAGACGGTTCAGATCACCATTGTTGATTATGCTTTGCAGACGGAACCACCATGGCTTTGTCCACCAACGCGTTTAATGCCATTGTTAATACCTCCGTTTCTGTTGCCCAAGTTACCGTTGAATTTCAACAGTAATTTTCGATCTCTCTTCTTTTATTATCTTATTTATTGATGATTCTGCATTTTTATTAAAATATCATTTGAGTTTGAAATATTTGTTCTATTTGGCCATTAATTTTTCACAATTTAATTTTGGCTAAACTATAGAAAATGCCCTTATACTATGAGAGTTGTGTAAAAAATGCCCTTGAACTTTGAAAAGTTTCAAAAATACCCTCAAAATTTAATTTTAGTTTAAAAAATACCCTTGCAGTTAAATTTGGATGGAAACCGTTAAAATTTAGTTTAAAAAATACCCCTAAACTTTGAAAATATTTCACAAATGCCCTTAAACTTTAAAAATAATTAAAATACCCTCGACTTAAAAAAAAAATTAAAAATATCATCGTCAATAACTTTTAGATAAAAAAGTATTATACTTTTATTTGAATAGTATTCTCGATCTTTTAAAAACTTAAAAAAAATATATTCTTATTTAAAAAATATTTTTTTCTCTATTCAAATGCATTTTCTCCAAAAAAAAAATTAACGAAAATAAATATATTATTAGCCTTTAAATAACAATGACCAAACAAGTTTCAAAATTAAAAATCTATAATAATAATCATAACTCTTTAAAGATAATTTATAATTGAATTTAGGGATTTTAACTTGAATTTATTTAAATAATATAATTACTTATTTGTGATCTGAAACTAAATTAATTGACGATGAGTATGCGGTTTTCATCCAAATTTAACATTGTCGATAACTTTTGGATAAAAAAAAAATTACGTATTTTGTTTAAAAGTGTCAATATTGTACCCTTAAAAAACTCTAAAAATTATTCTTACGTAAAATAGTTATTCTTTATTCATATCTTTTTTCGCCATGAAAATAAATATGTTATTAACATTTCAATAATAATGTGACCAAAAAAAAGTTCTAAAATTCTAAATCATAATCATCATTCATAATTTTTCTTTAAAAAGTTGCTGTCAGGATGAATTTTGGCATGAATGAATATTTTGAGGTAGAGATTTATTCAATTATTCAAAATTTAAAGATAATTTATTATGTATATTATATATATATATACTTATTTGAATTTAATAAAAAAATTTCGATACAATATTAAAATAGCATGAGATTTTCATTTCATAATCAATTGACAATGAAAGAGTAATTCATCGCTAAGAAGTATGTCACATTTGATTTCAAAAAAAAAAAAGAGGTATGTCACATTTTCAATGTGAGATTTTCAACACAATTTTTTTTTAGTACTTGCTCAACACAATTCAAGTTTAAACAATTAATATTTATATAAAAATAATTCATAAGTTATAAATACAAAAGTAAAATTTATCTTTACGAGCACAATTAAATATTTATGATATTATTGAAACAAAATGTTAACATTTTCATTATTATTTTATATTTTTTAAGATTAAAGGTATTTTTGAAACATCTTGCAAGTTTAGGGGCATTTTCGAAACATAATACAAGTTTAAGAGTATTTTTGAAACCAAACTTTAACGGTTTCCATCCAACTTTAACGGTGAGGGCATTTTTAAAACTTTTGTTAAAGTTTAGGGGTAATTTTGAAACTTTTAAAAGTTTAGGGGCATTTTTGACACAAACACCATAGTATAGAGGCATTTTCTATAATTTAGCCTTTAATTTTAATATTTAAATTTGAGGTTTGTTTTATTTTATAAAAAAAAAGTTTAAAATCGGTCAATAAAGAAGATTTTTGTTTAAATTACTTTTTTTTCTATAAATTTTAGAAATATTTTCACATTTAAAGTTATTAATATTATTGAAATAATTTTTCTTATTGATATTAAATTCAAATTTATCATCTTTTCAAAAAAAAAAAAATCAAATTTATCATGTATATTCATTTAAATTTTTTTAAAGTAAAAAAATTAAATTTTAGACATTTAAAAGCAGGGATTAAAATGTAACAACTTTAAATTTCAAAACTAAAGTTTGGATTTTTAAATTTTAGAACCAAAATAAAATAAATTTCAAATTTTAACATGAAAATGATATTTTAATATTTATTTATTTTTCTAGGAATCTGGGTTTTTGATTGCTGAAGCAAAGCAAGTTTTTGGTTGGAAAAAGGCGTGTTTGGAACTTTGAAAATAATTTTTTTAATGAAAGTGGGAAAACTGTAGTTTAAATTACTAAATTTTATTTTTGTATTGTTTGATTGGTTTATAAATTTGAGGATTTTATAATTTTTTTTTTTGAGAATAAGGATAAATTATTTTCATTTATGGTACAAAATTAAAATTAATAAATCATAGTAAGAAATATAAAATGAGTTCTATCACTAGAATTCAATCAGAATAATTTCATTTTATCATTGGTTGAATTCATAAAAAATAATGTGCTATACGTAAAAAAAGAGGTATAGATTACTAATATATAACCAAAAAAAAAAAATTATGAATGAAACTATTATCCAAAGTTTTGCTTATTTATTTATTTTTAAAGTGCCAGAAATTAAACTGAGGAACACGTACGGTTTATAATTAAAAGGCTCTAACTCTCTTCAGAAAAATTAAAAAAAAATCCTGAAAATTGAAATAAATATAAATAATATTTTAATGGTGCAAATGTTTTGTTCGGTTGCAGGGTATAAATTGTACAGATTTGAAGATGTTGAATTTGATTCAATAGGAAACAAGAACCCACCAAGATGTGAGTGAAGTTTTCTTCATATAAAAATGTGATTTAGATTATTGCAACTTCCTGTTTTTTAAATTCTAATATAAATAGCATAATTTCTCAATGCTATATGTAACCAAATTTATGTAATCAATGAGAAATTAAATAGTATATATATATATATGTCATTCTTATCTATAATTTATTAAATAGAAATTAAATTTATGTAACCTTTTTTATTTCGATTTGGGTGTGAGTAAAAAACCTTCTTATCTATAATTATTGTGTTTTTTCAACATTTCTTTCACTAGTATTACTCATGTTCGACTTGAAGGAGAAAGTTTTGGAGGGCCTTTCCCGATTTTGTGCTAATTTCGCCTCCAATTCCTTGTCTTAAGGATGTGTTTGAACTATAAAAAATTATTCTCCTTAATAATCACGTTTTTCAAAACATCATTTTTTTCGTTCACCTCTCAATTACTTTTCATTCTCCCTACAATAACTTTTTATACATAACATCACTATTTTTCACTTTTATCTTATCCATTATTTTATTTTTTCTCAGAATCATTCACTCCCTTAAACATATTGTTGGTTACAATTGTAACTCATTTTTTAAAATAGTTTATTCATGGCATATTTTGTCAAAAATTCTTATTCTATCATTATTATACTTCTATCAGTTCTATTGATAGATTTTGAATGATTGAACCGTGCAAATTGATAGACTTCAATCGATTTTGAGTGATTGAATAGTGCAAACTGATAAACTTCAATCGATTTTGAGTTATTGAACAATGCAAATTGATAGATTTCAATTGTTTTTGTGCTCCAAATGATTAAGTTTTGGAATTGTGCTATACATGTAATTATTTTATTTATTTTAATATACATGCAAAATCTCAAAAAAAAAAAAAAAAACAAACAAACAAACAAACTTGTTGAATTCAAATTGTTTGCTTGTTTTTTTTTCAAATCGTATTGATGGTGCTATTTCCCAAAATTATTATAAATGTAAAAAACTTTAAAGTATTTATATTTATAGTCATTACTACGTTTTAATACGATATTAATATTCATTAATAAAATATCTTTTTTTTGAAAGGTTCATTAATAAAATATTACATATTATTAATATAGTATTATAAGAATGTATGTATAAATATTCATCGGTGACTAAATTTGCTAATTTTTTAAATAGTGATTATTCATAAATATTGTTTAGATTTAATTAATCTAGTTTGTTTATATATAAATAACCAGTAAACAGTTACAACTGCATAAAATAGATTCTCAACAACTCAAACCAGTTTAATTAGGCAATTCTTAATGTGAACTCCCTAACCTGATCACCACATCACTGGAAAAGTTTTAGTTTTTGTTATATTTATAATGCAAAATTTAGAAGTTTTTGAAGATGCTCCAATGGAATTGGTCCCCAAATTTCTCTTCAGACCATGGTTCGAGCTAATAAACACATTGTCAGTCTTTTAATTTTTTTTATTATTATTTTCTGAATTCTCTTCCTTCGTTAATTAGTTTCATTTGTGTTTAATTTCCTCTTATTTTTTTTAATTCGCCTTTTATTGTATTTATTTATAAAAGCTTCATTTTTTGTTTCTTTTCCTCTATTTTATTCTTTTAACTATAACTATATTTTCCATTCTTCTTGTATATATTTTCTTTTCATTTTTTTTTTGTGTGTTTTAAAAATTTGTTTTTTATCAATTTTAAATATAGAGAAAATTGTAGTTTGGACTTTAAAATATACATGTTAGGATTCCAAATTCGTTTGTTTTTTGAAAATGCCACGTAGGCTTATTTTGTTATCCCATTAGTTTTCGTCGTTAGTGGTTAGGAAGTTAATAACCGCCTCTAATCACACTATATAACATTAAGTGAATAATTAAGTTTGAATCAAATTCAAAATCATGGAGTTCGCGGGTAATCTTCCGATTTCCTCCGAGACCGAAGCCGAGAAATCTTGTGCGGCGGCGATCGGAGCGGAGGAATGTTACGCGGCGGCGATCGAAGTGGAGAAATGTTGCGCGGCGGCGATCGGAGCGGAGAAATGTTGCGCAGCAGCGATGGAAGCGGAAAAATCTTGCGAGGCGGCGATCGGAGTGGAGAAATGTTGTGTGGCGGCGAACGAAGCGGAGAAATGTTGTGCAGCGGCGATCGAAGCCGAGAAATGTTGCGCAGCGGCGATCGAAGCCGAGAAATGTTGCACGGCGGCGTTCGGAGCAGAGAAATGTTGCTCGGCGGCGATCGAAGCGGAGAAGAACGCCGAGAAGAGTTGCTGCACTGAAAACTCTGAAATGGTTCCCATCGAAGCAGCATCTGCAATCGAACTCAAGAAGAATGGCAAGCACTGTTGCGACTCTGAAAAGCTTCCCGCAGCAGCGATGGAAGCCACGAAGAAGTCTTCCGAGGAGTCCGATGATGCTACTGAAACTCCCCGTGGCTACTGCGTCCGATGTGAGAAAGGGTGCCGGCAGCGCTACTGCCCATGCTTTAAGGATGGGAGGCCTTGCAATCATAGGTGTACCTGCGTCAATTGTGAAAATCATCCAAGGGGTCCTCCACGTCAAGAGTAGGTGATACAGATTTATTCAATTCTTTGCTGCCTTAAAAACACAGATAGATGATCCTATCCTTTTCTTTTTTGTCATATAGAATGTGGATATAGAATTTTTTTTGTCAAATAGCCATTGAAATTGTAATATACCTATTCTTCACTATTGGACACAGATGGAATTGAAATTGAAATGGGATATTTCCCTTTCTTGTTTTTGGTACAATTGGGTGTTTGTTGGATTTCTATTGAACCTTTAGTTTTAATCAAGTGAGAAATTAGTTTTGGTTTTGGTTTGGTGCATCTTTATCTTGATTGAATCTTCAGGTTTGCTATCTTCAGTGGATTCTCAAGTCTTTTGGTTGATGAAACTAGGTTTCTGCTATACAGTTTTATGGAATTTGACAACTTTGTATGGTAAAATTTATGCTTACAATGTAAAATTCTCAGTATTAGAAACTTTTTTAGGTGAGTTTGATTCAAGGCATTTTTCTCATTCTTTGTGTTGTGGTGGGTGGTGTTTGCTTAAATTGTCAAAAAGTTGTTTTAGAGTACCAAAAACAACTCTGTTTCAAATTGCTCCCAATCTTTTGGAGACTACTCTTGCATCACTAATCCCATTGCATGTGGTTGAATGAACTTATGTTTCTCAAGACTTGGACTAGATGCCATTGTGTTGTTGTAGATTCATCATATAAAATGTGTTAGTTTACGACCGACTTATCGACCCCTAGTTCAAATTTGGCATGCTTGTGATCTATTTAATCTCAATTTTCAACCATTGCTCTATGTAAGGGAACTTGACAAGATCCTTGGTGGTGATGATATTTAAGGTTTCGAGTCGAGTTACTTTGTTTGGTTGTTCCAGTCCAGACTCTTAGCTCGAGTATTTAGTTTGCAGCTTTAGATTTATAATTAGGTTTGTTAGTCAGTAAGCTCACTTAGTAGGAGGTGTTGGACTGGTTCTATCGAAGATGATGCTTCCTGTGCTGCTGCTCTGGGCGCTCTCTTGATGCAAGTAGGCAATTCGAATTCTTCATTTTTGCGTTTTTGTTATCTGCTTTTGCAAATTTGTTAGTAATATGTACAATTTTTGGTTTCTCTAGGTGTCTCCAAAGGAGATACTATATGAAGCTAGAGGTGAAAATCTTTCCTCTCCACCATGAACTTTAAGTTTTCATTTATTTGATTAATATGTTTATTTTTGTCCAACTTTACCTCAACTTCAACAATTTAATTTTTTGCAGGGTTATCTAAAGAAACACATAAGGTTCTCAAGAAAGTAGTCGCGAATGGGTTGGTTCTTTTTGCATCTTTATAATTATTATTAAGAAACTTATTTTGATGATTAAGTTACTTCAATTCCTACTAGTTACTTTACTCGTTGCTAGTACTAGCTACTAATTCGATCATTGAGACCTCGTTTGATAACCATTTTGTTTTTGAAATTTAAGCCTACAACAACGAACCCTACCATAGCTTTTTTCTTATTTGGATATCTATATCTTACCTATATTTTAATAAACAAAACCAAAATTTGGAAACAAAAAAAGTAGCTTTCAAAAGCTTGTTTTTGTTTTGAAATTTGGTTAGTATTCATCTACTTTCTCAAGGAAAGATAGATATATTGTAGGAAAAATGGAACACATGGTAGAAAATTTGAGTAGAAATAGACTTAAATTTCATAAAACAAAAAAAAAAACCAAATGGTTATCAAACGTGGCCTAAGTTACTGCAATGCTATCAGGTTTAAATTGCAAGAGATTGACCTTTGGTGAACAGAAGTGCATCTTATCTGTGTTTTGACGTTATTGCTTTGGATTGACCATTAGTTTCTAGAGCATCTCTTATGTTAGTATATTAATAAAATAAATGTGTTGAATCACTATCACTTGGAGACCGGAGAGTTCACTTTTATGTTTTGTTTACTCCAGTCCATTTTAGTACCATACCAATTGTAAAATTTGTTGAACTAATCAATAGTATTACAACTATATTTGAATCAGGATTTCAAAAAAAAAAAACTATATTTGAATCATAAAGGGAAGTTCCTTTATGGTTTTGATAATTTTGGTTACATGAAGTTTGGGGTAGAATAGTCTGAATTTGTATGATATGTGCTTGGCTTGTAAAGGAAATAGATTTTAGCATGAGTGTGGTTTGAGGATTCATAATTTGTAATTTGTAATTGTTAAAATGCAGTATAAATAGTTGATTTCATAAGATCAAGTGTAGGAAACTAATGTTTTGGGAGAAGTAAATTCATTTACCAAATGTAGGCTTGACATATTAATACTAGGTTGAACATAACTCACTCTCTTTATTTATTTTTTATTCTTTCTGTACTTGTGAATGTTTGTATCAGTTTATGCATACCTCGACTATTTTCCATGGATAGCTCATCTCCCTCTCTTTGTTAATGTTTGAATTTGTACGTTGTGTACACAGATTTGTAAGAAATCTGATGCCAAAGGATTGATGATGCTGTTCAAAAGCTTGTTGCTCGTGGATAAGGATGTTGAGATTTCTGTCGTTTTGTTCATCATGTTTGTGTGCTATTTATATTTTGAGTATTTAAGGTGAGGCTAACACATTTTTGTGACGATCCTTATGAAGATGTAAAGTTGATCGAATCGAGCAGTTGGAATCTTCGGATCAAACAAAAACCCGAGGTGCAAATTCTGTAAGTATGCCACTTCAGATAATACACAAATGTGTTCGCCTTGTTTTTCATTTTTTGTTTATGAAATTTAAGCCTACAACTACCACCTTACTATACATTTTTCTTTATTTGGATATCTACATCTTACCTATATTTTAATAAACAAAACCAAAATTTGTAAACAAAAAAAAGTAGCTTCCAAAAAGTTGTTTATGTTTTTGATATTTGGTTAAAATTTTCCTACTTTCTTAAGGAAAGATAGATACATTGTAGGAAAGATAGATACATTGTAGGAAAGATGGAGCACATGATAGGAAATTTGAATAGAAATAGGCTTAAATTTCATAAACTAAAAAACAAAAAACAAAATGATTATCAAACAGGACCTAAGTTATGCAAATCTATTTGCACTGTTTGAGTGTTTATATTTATATCAAGATGATTTTTAAATTTGGATTTTCAATTTTTTCAAAAGAGTTCCATTGTTCTGCATCTGGATGACACATCAACTTAATTTCTGACTTGTTACCTGTGGATTGCAGGTGATACCTAGGAAATTAGTACAGGTTATCACTCCATCAACCAAGGAAGAAGAATTGGAATTGATGCTGTTCATTTGCTTGCCATCAAAGAGGTACTAAAAGTAGAAATGATCTAATTCTTGTATGTATTTGTATTTGGACTTGTTAGAAACATGACGATTGTGGTTCTTGATATAATTTAGGCCCCGTTTGATAACCATTTTGTTTTTTGTTTATGAAATTTAAGCCTATTTTTATTCAAATTTTCTACCATGTGCTCCATCTTTCCTACAATGTATACATCTTTCCTTAAGAAAGTAGGAGAATACTAGCCAAATTTCAAAAACATAAACAAGTTTTTGGAAGCTACTTTTTTTTGTTTACAAATTTTGATTTTGTTTATTAAAATATAGGTAAGATGTAGATATCCAAATAAGGAAAAAGGTATAATAAGGTAGTTGTTGTAGACTTAAATTTCATAAACAAAAAACGAAAAACTAAATGGTTATCAAACGGGGCCTTAACTTCTCCTTTTCTCTTTCAGTTATGAGTTAGAGGCACATTTATTCTTCTTCTCTGTTTTCTTAGAAAAAATTTATAAGTTTTCGCTTGTTGAGAAATTCACAGTTAATCAACAGTTGAAGAATCTATTTTGTGGTTTTAATATTTCAAAAAAAAAAAAAAAAACCATTTCTAGTCTCATTTTGGATAAGAAAGTTACTTTAGATGATGAGGTTGAAAAAATTAGAGTATGATGAAGCTACATTGACCATATGCTTCATTGTAATTTTTCACTAGGAGAGCTGTGGGCTGGATAATAATTCTATAGAATATGGTCAAGAAGCCTTTGGTGAACCAAAAGGTTATGCATTTGATCCATTGTGACATTCTACTAAGGAATTAATTTCCTAGGAGTTTTCTTGACTGTCAAATATTGTAGAATTAGGCGGCTTGTTCTGTTAGGATAGTCGAAGCGCCTGTAAGTTGATCCGGATACTCATAGATAAAAAAAAACCGTGGGAACTTCATCTTAAACACTATGTCATCATATCTTTACCAGGCTTAAAATGTTTATTTTTACTCTTATTTGTAATCTCTTGACAGAACAGAACCATGATGGTGGATTCTAATGCTAAAAGGCTCTCTATTCTGATCAAGTTATTTGTAGAGAAAGCCACTGAATGGTCTGAAGTACTTCATGCCCTCAATTGCATTGATTTTTTCATCATTCCATTGCAGAAATCGTGTCTCGAGAGTAATGTCGATGCCCCAGATACTTTCAACAATGAATTCCGAGATTATGGCCATAGACAGAAGTAG

mRNA sequence

CTTCCCTTCAAAAAACAAAATGTTGAGAACAAAACCTTCAAATCCTCTCCAATGGAGGCGCCTCTCTCCTCCTCCTCTTCCTCCCTCACCTTCTCCACTCCTCTAATGGCGACGTCGGCACCGCCTTACATATTCCCCGCCGTATTCTCAGAAGAATTCCAAAATCAATTTTAGAATTTCGGTTTCGAATTTAGGGTTTTGAGATTTGTTTGTTTGGTATTAGATACTGTGTCATTCAATATGGAATCTTGAAATTTATTGATTCTGATATCATATTAAATAGTATGAACATTAATCTCAAAATTAATCGAAAACGAGAGAGGAATGAGTTGTCAACATTTTTTTATATGACTCACTCTTTCAATATCCTAAGATTTTTTTTTTTATTTTTATTGTTTAAGAGTGTGACATTCGATGTGAGATCCTAAGATGGTACTTCTTTTAGTCGAATATCGACTTAGATTTACTATTTCTATAATATATTAGACAATGTCCAATTGATTAACGAGAGAAAAAAAAAGTAGTCTACTTTTCTTATATATTGCCGAGAAATATCCCTCTCAGCCTCCGTTTGTTGCAGCGACAGCCTGTTTGGGCGACAATTTGAGCGAGTTCCCGACGAGCAATTTGTTTGCGGCGGCGGGAGATGGGATATGGGAGAACGGGGCGGCGTGCGGGAGGCAGTGTATTACGTAAGGTGTTTCAGTGCGTCGGAGCCGGAGGCGTGCGTGCCGGATCAGACGGTTCAGATCACCATTGTTGATTATGCTTTGCAGACGGAACCACCATGGCTTTGTCCACCAACGCGTTTAATGCCATTGTTAATACCTCCGTTTCTGTTGCCCAAGTTACCGTTGAATTTCAACAGGTATAAATTGTACAGATTTGAAGATGTTGAATTTGATTCAATAGGAAACAAGAACCCACCAAGATTTCGCGGGTAATCTTCCGATTTCCTCCGAGACCGAAGCCGAGAAATCTTGTGCGGCGGCGATCGGAGCGGAGGAATGTTACGCGGCGGCGATCGAAGTGGAGAAATGTTGCGCGGCGGCGATCGGAGCGGAGAAATGTTGCGCAGCAGCGATGGAAGCGGAAAAATCTTGCGAGGCGGCGATCGGAGTGGAGAAATGTTGTGTGGCGGCGAACGAAGCGGAGAAATGTTGTGCAGCGGCGATCGAAGCCGAGAAATGTTGCGCAGCGGCGATCGAAGCCGAGAAATGTTGCACGGCGGCGTTCGGAGCAGAGAAATGTTGCTCGGCGGCGATCGAAGCGGAGAAGAACGCCGAGAAGAGTTGCTGCACTGAAAACTCTGAAATGGTTCCCATCGAAGCAGCATCTGCAATCGAACTCAAGAAGAATGGCAAGCACTGTTGCGACTCTGAAAAGCTTCCCGCAGCAGCGATGGAAGCCACGAAGAAGTCTTCCGAGGAGTCCGATGATGCTACTGAAACTCCCCGTGGCTACTGCGTCCGATGTGAGAAAGGGTGCCGGCAGCGCTACTGCCCATGCTTTAAGGATGGGAGGCCTTGCAATCATAGGTGTACCTGCGTCAATTGTGAAAATCATCCAAGGGGTCCTCCACGTCAAGAGTTTGCTATCTTCAGTGGATTCTCAAGTCTTTTGGTTGATGAAACTAGGTTTCTGCTATACAGTTTTATGGAATTTGACAACTTTGTATGGAGGTGTTGGACTGGTTCTATCGAAGATGATGCTTCCTGTGCTGCTGCTCTGGGCGCTCTCTTGATGCAAATTTGTAAGAAATCTGATGCCAAAGGATTGATGATGCTGTTCAAAAGCTTGTTGCTCGTGGATAAGGATGTTGAGATTTCTGTCGTTTTGTTCATCATATGTAAAGTTGATCGAATCGAGCAGTTGGAATCTTCGGATCAAACAAAAACCCGAGGTGCAAATTCTGTGATACCTAGGAAATTAGTACAGGTTATCACTCCATCAACCAAGGAAGAAGAATTGGAATTGATGCTGTTCATTTGCTTGCCATCAAAGAGAACCATGATGGTGGATTCTAATGCTAAAAGGCTCTCTATTCTGATCAAGTTATTTGTAGAGAAAGCCACTGAATGGTCTGAAGTACTTCATGCCCTCAATTGCATTGATTTTTTCATCATTCCATTGCAGAAATCGTGTCTCGAGAGTAATGTCGATGCCCCAGATACTTTCAACAATGAATTCCGAGATTATGGCCATAGACAGAAGTAG

Coding sequence (CDS)

ATGGAAGCGGAAAAATCTTGCGAGGCGGCGATCGGAGTGGAGAAATGTTGTGTGGCGGCGAACGAAGCGGAGAAATGTTGTGCAGCGGCGATCGAAGCCGAGAAATGTTGCGCAGCGGCGATCGAAGCCGAGAAATGTTGCACGGCGGCGTTCGGAGCAGAGAAATGTTGCTCGGCGGCGATCGAAGCGGAGAAGAACGCCGAGAAGAGTTGCTGCACTGAAAACTCTGAAATGGTTCCCATCGAAGCAGCATCTGCAATCGAACTCAAGAAGAATGGCAAGCACTGTTGCGACTCTGAAAAGCTTCCCGCAGCAGCGATGGAAGCCACGAAGAAGTCTTCCGAGGAGTCCGATGATGCTACTGAAACTCCCCGTGGCTACTGCGTCCGATGTGAGAAAGGGTGCCGGCAGCGCTACTGCCCATGCTTTAAGGATGGGAGGCCTTGCAATCATAGGTGTACCTGCGTCAATTGTGAAAATCATCCAAGGGGTCCTCCACGTCAAGAGTTTGCTATCTTCAGTGGATTCTCAAGTCTTTTGGTTGATGAAACTAGGTTTCTGCTATACAGTTTTATGGAATTTGACAACTTTGTATGGAGGTGTTGGACTGGTTCTATCGAAGATGATGCTTCCTGTGCTGCTGCTCTGGGCGCTCTCTTGATGCAAATTTGTAAGAAATCTGATGCCAAAGGATTGATGATGCTGTTCAAAAGCTTGTTGCTCGTGGATAAGGATGTTGAGATTTCTGTCGTTTTGTTCATCATATGTAAAGTTGATCGAATCGAGCAGTTGGAATCTTCGGATCAAACAAAAACCCGAGGTGCAAATTCTGTGATACCTAGGAAATTAGTACAGGTTATCACTCCATCAACCAAGGAAGAAGAATTGGAATTGATGCTGTTCATTTGCTTGCCATCAAAGAGAACCATGATGGTGGATTCTAATGCTAAAAGGCTCTCTATTCTGATCAAGTTATTTGTAGAGAAAGCCACTGAATGGTCTGAAGTACTTCATGCCCTCAATTGCATTGATTTTTTCATCATTCCATTGCAGAAATCGTGTCTCGAGAGTAATGTCGATGCCCCAGATACTTTCAACAATGAATTCCGAGATTATGGCCATAGACAGAAGTAG

Protein sequence

MEAEKSCEAAIGVEKCCVAANEAEKCCAAAIEAEKCCAAAIEAEKCCTAAFGAEKCCSAAIEAEKNAEKSCCTENSEMVPIEAASAIELKKNGKHCCDSEKLPAAAMEATKKSSEESDDATETPRGYCVRCEKGCRQRYCPCFKDGRPCNHRCTCVNCENHPRGPPRQEFAIFSGFSSLLVDETRFLLYSFMEFDNFVWRCWTGSIEDDASCAAALGALLMQICKKSDAKGLMMLFKSLLLVDKDVEISVVLFIICKVDRIEQLESSDQTKTRGANSVIPRKLVQVITPSTKEEELELMLFICLPSKRTMMVDSNAKRLSILIKLFVEKATEWSEVLHALNCIDFFIIPLQKSCLESNVDAPDTFNNEFRDYGHRQK
Homology
[Close]
BLAST of Sed0019890 vs. NCBI nr
Match: XP_022999426.1 (DNA mismatch repair protein MSH7 [Cucurbita maxima])

HSP 1 Score: 68.2 bits (165), Expect = 1.8e-07
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = 0 

Query: 257 KVDRIEQLESSDQTKTRGANSVIPRKLVQVITPSTK 293
           KV RIEQLESSDQTKTRGANSVIPRKLVQV+TPSTK
Sbjct: 344 KVGRIEQLESSDQTKTRGANSVIPRKLVQVVTPSTK 379

[Close]
BLAST of Sed0019890 vs. NCBI nr
Match: XP_022999426.1 (DNA mismatch repair protein MSH7 [Cucurbita maxima])

HSP 1 Score: 59.7 bits (143), Expect = 6.3e-05
Identity = 27/34 (79.41%), Postives = 32/34 (94.12%), Query Frame = 0 

Query: 311 MVDSNAKRLSILIKLFVEKATEWSEVLHALNCID 345
           + DS+A+RLSILI+LFVEKATEW EV+HALNCID
Sbjct: 738 VTDSDAERLSILIELFVEKATEWCEVIHALNCID 771


HSP 2 Score: 68.2 bits (165), Expect = 1.8e-07
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = 0 

Query: 257 KVDRIEQLESSDQTKTRGANSVIPRKLVQVITPSTK 293
           KV RIEQLESSDQTKTRGANSVIPRKLVQV+TPSTK
Sbjct: 344 KVGRIEQLESSDQTKTRGANSVIPRKLVQVVTPSTK 379

[Close]
BLAST of Sed0019890 vs. NCBI nr
Match: XP_023547322.1 (DNA mismatch repair protein MSH7-like [Cucurbita pepo subsp. pepo] >XP_023547323.1 DNA mismatch repair protein MSH7-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 59.7 bits (143), Expect = 6.3e-05
Identity = 27/34 (79.41%), Postives = 32/34 (94.12%), Query Frame = 0 

Query: 311 MVDSNAKRLSILIKLFVEKATEWSEVLHALNCID 345
           + DS+A+RLSILI+LFVEKATEW EV+HALNCID
Sbjct: 738 VTDSDAERLSILIELFVEKATEWCEVIHALNCID 771


HSP 2 Score: 68.2 bits (165), Expect = 1.8e-07
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = 0 

Query: 257 KVDRIEQLESSDQTKTRGANSVIPRKLVQVITPSTK 293
           KV RIEQLESSDQTKTRGANSVIPRKLVQV+TPSTK
Sbjct: 344 KVGRIEQLESSDQTKTRGANSVIPRKLVQVVTPSTK 379

[Close]
BLAST of Sed0019890 vs. NCBI nr
Match: KAG7030424.1 (DNA mismatch repair protein MSH7, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 59.7 bits (143), Expect = 6.3e-05
Identity = 27/34 (79.41%), Postives = 32/34 (94.12%), Query Frame = 0 

Query: 311 MVDSNAKRLSILIKLFVEKATEWSEVLHALNCID 345
           + DS+A+RLSILI+LFVEKATEW EV+HALNCID
Sbjct: 738 VTDSDAERLSILIELFVEKATEWCEVIHALNCID 771


HSP 2 Score: 68.2 bits (165), Expect = 1.8e-07
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = 0 

Query: 257 KVDRIEQLESSDQTKTRGANSVIPRKLVQVITPSTK 293
           KV RIEQLESSDQTKTRGANSVIPRKLVQV+TPSTK
Sbjct: 344 KVGRIEQLESSDQTKTRGANSVIPRKLVQVVTPSTK 379

[Close]
BLAST of Sed0019890 vs. NCBI nr
Match: KAG6599446.1 (DNA mismatch repair protein MSH7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 59.7 bits (143), Expect = 6.3e-05
Identity = 27/34 (79.41%), Postives = 32/34 (94.12%), Query Frame = 0 

Query: 311 MVDSNAKRLSILIKLFVEKATEWSEVLHALNCID 345
           + DS+A+RLSILI+LFVEKATEW EV+HALNCID
Sbjct: 738 VTDSDAERLSILIELFVEKATEWCEVIHALNCID 771


HSP 2 Score: 68.2 bits (165), Expect = 1.8e-07
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = 0 

Query: 257 KVDRIEQLESSDQTKTRGANSVIPRKLVQVITPSTK 293
           KV RIEQLESSDQTKTRGANSVIPRKLVQV+TPSTK
Sbjct: 344 KVGRIEQLESSDQTKTRGANSVIPRKLVQVVTPSTK 379

[Close]
BLAST of Sed0019890 vs. ExPASy Swiss-Prot
Match: Q9SMV7 (DNA mismatch repair protein MSH7 OS=Arabidopsis thaliana OX=3702 GN=MSH7 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.7e-08
Identity = 29/38 (76.32%), Postives = 33/38 (86.84%), Query Frame = 0 

Query: 257 KVDRIEQLESSDQTKTRGANSVIPRKLVQVITPSTKEE 295
           KV RIEQLE+SDQ K RGAN++IPRKLVQV+TPST  E
Sbjct: 343 KVGRIEQLETSDQAKARGANTIIPRKLVQVLTPSTASE 380


HSP 2 Score: 50.8 bits (120), Expect = 3.8e-05
Identity = 19/34 (55.88%), Postives = 30/34 (88.24%), Query Frame = 0 

Query: 311 MVDSNAKRLSILIKLFVEKATEWSEVLHALNCID 345
           + D NA+ L+ILI+LF+E+AT+WSEV+H ++C+D
Sbjct: 737 VTDENAETLTILIELFIERATQWSEVIHTISCLD 770

[Close]
BLAST of Sed0019890 vs. ExPASy TrEMBL
Match: A0A6J1G406 (DNA mismatch repair protein OS=Cucurbita moschata OX=3662 GN=LOC111450579 PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 8.6e-08
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = 0 

Query: 257 KVDRIEQLESSDQTKTRGANSVIPRKLVQVITPSTK 293
           KV RIEQLESSDQTKTRGANSVIPRKLVQV+TPSTK
Sbjct: 344 KVGRIEQLESSDQTKTRGANSVIPRKLVQVVTPSTK 379

[Close]
BLAST of Sed0019890 vs. ExPASy TrEMBL
Match: A0A6J1G406 (DNA mismatch repair protein OS=Cucurbita moschata OX=3662 GN=LOC111450579 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.0e-05
Identity = 27/34 (79.41%), Postives = 32/34 (94.12%), Query Frame = 0 

Query: 311 MVDSNAKRLSILIKLFVEKATEWSEVLHALNCID 345
           + DS+A+RLSILI+LFVEKATEW EV+HALNCID
Sbjct: 738 VTDSDAERLSILIELFVEKATEWCEVIHALNCID 771


HSP 2 Score: 68.2 bits (165), Expect = 8.6e-08
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = 0 

Query: 257 KVDRIEQLESSDQTKTRGANSVIPRKLVQVITPSTK 293
           KV RIEQLESSDQTKTRGANSVIPRKLVQV+TPSTK
Sbjct: 344 KVGRIEQLESSDQTKTRGANSVIPRKLVQVVTPSTK 379

[Close]
BLAST of Sed0019890 vs. ExPASy TrEMBL
Match: A0A6J1KCZ8 (DNA mismatch repair protein OS=Cucurbita maxima OX=3661 GN=LOC111493803 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.0e-05
Identity = 27/34 (79.41%), Postives = 32/34 (94.12%), Query Frame = 0 

Query: 311 MVDSNAKRLSILIKLFVEKATEWSEVLHALNCID 345
           + DS+A+RLSILI+LFVEKATEW EV+HALNCID
Sbjct: 738 VTDSDAERLSILIELFVEKATEWCEVIHALNCID 771


HSP 2 Score: 67.4 bits (163), Expect = 1.5e-07
Identity = 32/36 (88.89%), Postives = 35/36 (97.22%), Query Frame = 0 

Query: 257 KVDRIEQLESSDQTKTRGANSVIPRKLVQVITPSTK 293
           KV R+EQLESSDQTKTRGANSVIPRKL+QV+TPSTK
Sbjct: 344 KVGRVEQLESSDQTKTRGANSVIPRKLIQVVTPSTK 379

[Close]
BLAST of Sed0019890 vs. ExPASy TrEMBL
Match: A0A6J1DYJ9 (DNA mismatch repair protein OS=Momordica charantia OX=3673 GN=LOC111024229 PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 8.0e-06
Identity = 28/34 (82.35%), Postives = 33/34 (97.06%), Query Frame = 0 

Query: 311 MVDSNAKRLSILIKLFVEKATEWSEVLHALNCID 345
           + DS+A+RLSILI+LFVEKATEWSEV+HALNCID
Sbjct: 737 VTDSDAERLSILIELFVEKATEWSEVIHALNCID 770


HSP 2 Score: 63.9 bits (154), Expect = 1.6e-06
Identity = 31/38 (81.58%), Postives = 35/38 (92.11%), Query Frame = 0 

Query: 257 KVDRIEQLESSDQTKTRGANSVIPRKLVQVITPSTKEE 295
           KV R+EQLES+DQTK+RGANSVIPRKLVQV TPSTK +
Sbjct: 344 KVGRVEQLESADQTKSRGANSVIPRKLVQVTTPSTKAD 381

[Close]
BLAST of Sed0019890 vs. ExPASy TrEMBL
Match: A0A5D3CFZ1 (DNA mismatch repair protein MSH7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00200 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.0e-05
Identity = 27/34 (79.41%), Postives = 32/34 (94.12%), Query Frame = 0 

Query: 311 MVDSNAKRLSILIKLFVEKATEWSEVLHALNCID 345
           + DS A+RLSILI+LFVEKATEWS+V+HALNCID
Sbjct: 738 VTDSGAERLSILIELFVEKATEWSKVIHALNCID 771


HSP 2 Score: 63.9 bits (154), Expect = 1.6e-06
Identity = 31/38 (81.58%), Postives = 35/38 (92.11%), Query Frame = 0 

Query: 257 KVDRIEQLESSDQTKTRGANSVIPRKLVQVITPSTKEE 295
           KV R+EQLES+DQTK+RGANSVIPRKLVQV TPSTK +
Sbjct: 344 KVGRVEQLESADQTKSRGANSVIPRKLVQVTTPSTKAD 381

[Close]
BLAST of Sed0019890 vs. TAIR 10
Match: AT3G24495.1 (MUTS homolog 7 )

HSP 1 Score: 60.8 bits (146), Expect = 2.6e-09
Identity = 29/38 (76.32%), Postives = 33/38 (86.84%), Query Frame = 0 

Query: 257 KVDRIEQLESSDQTKTRGANSVIPRKLVQVITPSTKEE 295
           KV RIEQLE+SDQ K RGAN++IPRKLVQV+TPST  E
Sbjct: 343 KVGRIEQLETSDQAKARGANTIIPRKLVQVLTPSTASE 380


HSP 2 Score: 50.8 bits (120), Expect = 2.7e-06
Identity = 19/34 (55.88%), Postives = 30/34 (88.24%), Query Frame = 0 

Query: 311 MVDSNAKRLSILIKLFVEKATEWSEVLHALNCID 345
           + D NA+ L+ILI+LF+E+AT+WSEV+H ++C+D
Sbjct: 737 VTDENAETLTILIELFIERATQWSEVIHTISCLD 770

The following BLAST results are available for this feature:
BLAST of Sed0019890 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022999426.11.8e-0794.44DNA mismatch repair protein MSH7 [Cucurbita maxima][more]
XP_022999426.16.3e-0579.41DNA mismatch repair protein MSH7 [Cucurbita maxima][more]
XP_023547322.16.3e-0579.41DNA mismatch repair protein MSH7-like [Cucurbita pepo subsp. pepo] >XP_023547323... [more]
KAG7030424.16.3e-0579.41DNA mismatch repair protein MSH7, partial [Cucurbita argyrosperma subsp. argyros... [more]
KAG6599446.16.3e-0579.41DNA mismatch repair protein MSH7, partial [Cucurbita argyrosperma subsp. sororia... [more]

Pages

BLAST of Sed0019890 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SMV73.7e-0876.32DNA mismatch repair protein MSH7 OS=Arabidopsis thaliana OX=3702 GN=MSH7 PE=1 SV... [more]
BLAST of Sed0019890 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1G4068.6e-0894.44DNA mismatch repair protein OS=Cucurbita moschata OX=3662 GN=LOC111450579 PE=3 S... [more]
A0A6J1G4063.0e-0579.41DNA mismatch repair protein OS=Cucurbita moschata OX=3662 GN=LOC111450579 PE=3 S... [more]
A0A6J1KCZ83.0e-0579.41DNA mismatch repair protein OS=Cucurbita maxima OX=3661 GN=LOC111493803 PE=3 SV=... [more]
A0A6J1DYJ98.0e-0682.35DNA mismatch repair protein OS=Momordica charantia OX=3673 GN=LOC111024229 PE=3 ... [more]
A0A5D3CFZ13.0e-0579.41DNA mismatch repair protein MSH7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]

Pages

BLAST of Sed0019890 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G24495.12.6e-0976.32MUTS homolog 7 [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033467Tesmin/TSO1-like CXC domainSMARTSM01114CXC_2coord: 123..164
e-value: 0.003
score: 18.2
IPR005172CRC domainPFAMPF03638TCRcoord: 131..161
e-value: 3.3E-5
score: 24.1

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0019890.1Sed0019890.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0036297 interstrand cross-link repair
biological_process GO:0043570 maintenance of DNA repeat elements
biological_process GO:0000710 meiotic mismatch repair
biological_process GO:0045910 negative regulation of DNA recombination
biological_process GO:0006290 pyrimidine dimer repair
cellular_component GO:0032301 MutSalpha complex
molecular_function GO:0005524 ATP binding
molecular_function GO:0008094 ATP-dependent activity, acting on DNA
molecular_function GO:0000400 four-way junction DNA binding
molecular_function GO:0032405 MutLalpha complex binding
molecular_function GO:0032357 oxidized purine DNA binding
molecular_function GO:0032143 single thymine insertion binding