Sed0019889 (gene) Chayote v1

Overview


Name	Sed0019889
Type	gene
Organism	Sechium edule (Chayote v1)
Description	NHL domain-containing protein
Location	LG08: 806954 .. 807445 (+)
RNA-Seq Expression	Sed0019889
Synteny	Sed0019889

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCGAATACAGATCTAGAAGAGCCTCCTCCTTGCGAAGCGGAGAAACCCAATTCTCTATTGCCGACCACCTCCTGCGGTTGTTACCGGCTATCATGCTTCGGATCTCGCCGGGAAACCGCCGGAGCGCCGTCGTGGTGGGAGCGGGTTAGGGCATCGCAAGCTCACGGCGAAGGGCGCTGGTGGCTGCGAGGCGTTAGGGTTCTTTTGAAGCTCCGAGAATGGTCGGAGATCGTGGCTGGACCGAGATGGAAGACTTTCATCCGCCGATTTAATCGGAATCGGAGCGGCGGCGGCGGTGCTAGGGTTGGGAAATTTCAATACGATCCGTTGAGTTACGCTATGAATTTCGACGAAGGTTCGGGGCAGATAGGGGAATTGGAGGACGATATGGACGATTACAGTGGATTTCGGAACTTCTCTGCTCGTTACGCTTCGATTCCGGCGCCGTTGAAGACCGGAGTAATCACCACCGCCACCGTCGCGTAA

mRNA sequence

ATGGCGGCGAATACAGATCTAGAAGAGCCTCCTCCTTGCGAAGCGGAGAAACCCAATTCTCTATTGCCGACCACCTCCTGCGGTTGTTACCGGCTATCATGCTTCGGATCTCGCCGGGAAACCGCCGGAGCGCCGTCGTGGTGGGAGCGGGTTAGGGCATCGCAAGCTCACGGCGAAGGGCGCTGGTGGCTGCGAGGCGTTAGGGTTCTTTTGAAGCTCCGAGAATGGTCGGAGATCGTGGCTGGACCGAGATGGAAGACTTTCATCCGCCGATTTAATCGGAATCGGAGCGGCGGCGGCGGTGCTAGGGTTGGGAAATTTCAATACGATCCGTTGAGTTACGCTATGAATTTCGACGAAGGTTCGGGGCAGATAGGGGAATTGGAGGACGATATGGACGATTACAGTGGATTTCGGAACTTCTCTGCTCGTTACGCTTCGATTCCGGCGCCGTTGAAGACCGGAGTAATCACCACCGCCACCGTCGCGTAA

Coding sequence (CDS)

ATGGCGGCGAATACAGATCTAGAAGAGCCTCCTCCTTGCGAAGCGGAGAAACCCAATTCTCTATTGCCGACCACCTCCTGCGGTTGTTACCGGCTATCATGCTTCGGATCTCGCCGGGAAACCGCCGGAGCGCCGTCGTGGTGGGAGCGGGTTAGGGCATCGCAAGCTCACGGCGAAGGGCGCTGGTGGCTGCGAGGCGTTAGGGTTCTTTTGAAGCTCCGAGAATGGTCGGAGATCGTGGCTGGACCGAGATGGAAGACTTTCATCCGCCGATTTAATCGGAATCGGAGCGGCGGCGGCGGTGCTAGGGTTGGGAAATTTCAATACGATCCGTTGAGTTACGCTATGAATTTCGACGAAGGTTCGGGGCAGATAGGGGAATTGGAGGACGATATGGACGATTACAGTGGATTTCGGAACTTCTCTGCTCGTTACGCTTCGATTCCGGCGCCGTTGAAGACCGGAGTAATCACCACCGCCACCGTCGCGTAA

Protein sequence

MAANTDLEEPPPCEAEKPNSLLPTTSCGCYRLSCFGSRRETAGAPSWWERVRASQAHGEGRWWLRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGGGARVGKFQYDPLSYAMNFDEGSGQIGELEDDMDDYSGFRNFSARYASIPAPLKTGVITTATVA

Homology

[Close]

BLAST of Sed0019889 vs. NCBI nr
Match: XP_038878924.1 (uncharacterized protein LOC120071012 [Benincasa hispida])

HSP 1 Score: 270.8 bits (691), Expect = 7.8e-69
Identity = 127/155 (81.94%), Postives = 136/155 (87.74%), Query Frame = 0


Query: 3   ANTDLEEPPPCEAEKPNSLLPTTSCGCYRLSCFGSRRETAGAPSWWERVRASQAHGEGRW 62
           A TD+EE  PCEA+K NSLLPT  CGC+RLSCFGSRR     PSWWER+RASQ H EGRW
Sbjct: 2   AFTDVEEESPCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERLRASQVHSEGRW 61

Query: 63  WLRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRS--GGGGARVGKFQYDPLSYAMNFDE 122
           W RGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRS  GGGG R GKFQYDPLSYAMNFDE
Sbjct: 62  WARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGGGGGVRAGKFQYDPLSYAMNFDE 121

Query: 123 GSGQIGELEDDMDDYSGFRNFSARYASIPAPLKTG 156
           GS QIGEL+DD+DD++G+RNFSARYASIPAPLKTG
Sbjct: 122 GSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTG 156

[Close]

BLAST of Sed0019889 vs. NCBI nr
Match: KAG6587481.1 (hypothetical protein SDJN03_16046, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 268.5 bits (685), Expect = 3.9e-68
Identity = 127/151 (84.11%), Postives = 133/151 (88.08%), Query Frame = 0


Query: 9   EPPPCEAEKPNSLLPTTSCGCYRLSCFGSRRETAGAPSWWERVRASQAHGEGRWWLRGVR 68
           E PPCEA+K NSLLPTTSCGC RLSCFGSRR TAG PSWWER+RAS+ H EGRWW RGVR
Sbjct: 7   EEPPCEADKSNSLLPTTSCGCSRLSCFGSRRTTAGGPSWWERIRASEVHNEGRWWARGVR 66

Query: 69  VLLKLREWSEIVAGPRWKTFIRRFNRNRSGG-GGARVGKFQYDPLSYAMNFDEGSGQIGE 128
           VLLKLREWSEIVAGPRWKTFIRRFNRNRSG    AR GKFQYDPLSYAMNFDEGSGQIGE
Sbjct: 67  VLLKLREWSEIVAGPRWKTFIRRFNRNRSGATAAARPGKFQYDPLSYAMNFDEGSGQIGE 126

Query: 129 LEDDMDDYSGFRNFSARYASIPAPLKTGVIT 159
           L+DD+DD+SGFRNFSARYASIP  LKT   T
Sbjct: 127 LDDDIDDFSGFRNFSARYASIPGSLKTAGTT 157

[Close]

BLAST of Sed0019889 vs. NCBI nr
Match: XP_022928159.1 (uncharacterized protein LOC111435061 [Cucurbita moschata] >XP_023530985.1 uncharacterized protein LOC111793374 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 268.5 bits (685), Expect = 3.9e-68
Identity = 127/152 (83.55%), Postives = 133/152 (87.50%), Query Frame = 0


Query: 8   EEPPPCEAEKPNSLLPTTSCGCYRLSCFGSRRETAGAPSWWERVRASQAHGEGRWWLRGV 67
           EEPP CEA+K NSLLPTTSCGC RLSCFGSRR  AG PSWWER+RAS+ H EGRWW RGV
Sbjct: 7   EEPPSCEADKSNSLLPTTSCGCSRLSCFGSRRTAAGGPSWWERIRASEVHNEGRWWARGV 66

Query: 68  RVLLKLREWSEIVAGPRWKTFIRRFNRNRSGG-GGARVGKFQYDPLSYAMNFDEGSGQIG 127
           RVLLKLREWSEIVAGPRWKTFIRRFNRNRSG    AR GKFQYDPLSYAMNFDEGSGQIG
Sbjct: 67  RVLLKLREWSEIVAGPRWKTFIRRFNRNRSGATAAARPGKFQYDPLSYAMNFDEGSGQIG 126

Query: 128 ELEDDMDDYSGFRNFSARYASIPAPLKTGVIT 159
           EL+DD+DD+SGFRNFSARYASIP  LKT   T
Sbjct: 127 ELDDDIDDFSGFRNFSARYASIPGSLKTAGTT 158

[Close]

BLAST of Sed0019889 vs. NCBI nr
Match: XP_023003975.1 (uncharacterized protein LOC111497423 [Cucurbita maxima])

HSP 1 Score: 268.5 bits (685), Expect = 3.9e-68
Identity = 127/152 (83.55%), Postives = 133/152 (87.50%), Query Frame = 0


Query: 8   EEPPPCEAEKPNSLLPTTSCGCYRLSCFGSRRETAGAPSWWERVRASQAHGEGRWWLRGV 67
           EEPP CEA+K NSLLPTTSC C RLSCFGSRR  AG PSWWER+RAS+ H EGRWW RGV
Sbjct: 7   EEPPSCEADKSNSLLPTTSCSCSRLSCFGSRRTAAGGPSWWERIRASEVHNEGRWWARGV 66

Query: 68  RVLLKLREWSEIVAGPRWKTFIRRFNRNRSGG-GGARVGKFQYDPLSYAMNFDEGSGQIG 127
           RVLLKLREWSEIVAGPRWKTFIRRFNRNRSG    AR GKFQYDPLSYAMNFDEGSGQIG
Sbjct: 67  RVLLKLREWSEIVAGPRWKTFIRRFNRNRSGATAAARPGKFQYDPLSYAMNFDEGSGQIG 126

Query: 128 ELEDDMDDYSGFRNFSARYASIPAPLKTGVIT 159
           EL+DD+DD+SGFRNFSARYASIP  LKTG  T
Sbjct: 127 ELDDDIDDFSGFRNFSARYASIPGSLKTGGTT 158

[Close]

BLAST of Sed0019889 vs. NCBI nr
Match: KAG7021468.1 (putative alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 268.5 bits (685), Expect = 3.9e-68
Identity = 127/152 (83.55%), Postives = 133/152 (87.50%), Query Frame = 0


Query: 8   EEPPPCEAEKPNSLLPTTSCGCYRLSCFGSRRETAGAPSWWERVRASQAHGEGRWWLRGV 67
           EEPP CEA+K NSLLPTTSCGC RLSCFGSRR  AG PSWWER+RAS+ H EGRWW RGV
Sbjct: 162 EEPPSCEADKSNSLLPTTSCGCSRLSCFGSRRTAAGGPSWWERIRASEVHNEGRWWARGV 221

Query: 68  RVLLKLREWSEIVAGPRWKTFIRRFNRNRSGG-GGARVGKFQYDPLSYAMNFDEGSGQIG 127
           RVLLKLREWSEIVAGPRWKTFIRRFNRNRSG    AR GKFQYDPLSYAMNFDEGSGQIG
Sbjct: 222 RVLLKLREWSEIVAGPRWKTFIRRFNRNRSGATAAARPGKFQYDPLSYAMNFDEGSGQIG 281

Query: 128 ELEDDMDDYSGFRNFSARYASIPAPLKTGVIT 159
           EL+DD+DD+SGFRNFSARYASIP  LKT   T
Sbjct: 282 ELDDDIDDFSGFRNFSARYASIPGSLKTAGTT 313

[Close]

BLAST of Sed0019889 vs. ExPASy TrEMBL
Match: A0A6J1KTA4 (uncharacterized protein LOC111497423 OS=Cucurbita maxima OX=3661 GN=LOC111497423 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 1.9e-68
Identity = 127/152 (83.55%), Postives = 133/152 (87.50%), Query Frame = 0


Query: 8   EEPPPCEAEKPNSLLPTTSCGCYRLSCFGSRRETAGAPSWWERVRASQAHGEGRWWLRGV 67
           EEPP CEA+K NSLLPTTSC C RLSCFGSRR  AG PSWWER+RAS+ H EGRWW RGV
Sbjct: 7   EEPPSCEADKSNSLLPTTSCSCSRLSCFGSRRTAAGGPSWWERIRASEVHNEGRWWARGV 66

Query: 68  RVLLKLREWSEIVAGPRWKTFIRRFNRNRSGG-GGARVGKFQYDPLSYAMNFDEGSGQIG 127
           RVLLKLREWSEIVAGPRWKTFIRRFNRNRSG    AR GKFQYDPLSYAMNFDEGSGQIG
Sbjct: 67  RVLLKLREWSEIVAGPRWKTFIRRFNRNRSGATAAARPGKFQYDPLSYAMNFDEGSGQIG 126

Query: 128 ELEDDMDDYSGFRNFSARYASIPAPLKTGVIT 159
           EL+DD+DD+SGFRNFSARYASIP  LKTG  T
Sbjct: 127 ELDDDIDDFSGFRNFSARYASIPGSLKTGGTT 158

[Close]

BLAST of Sed0019889 vs. ExPASy TrEMBL
Match: A0A6J1EK25 (uncharacterized protein LOC111435061 OS=Cucurbita moschata OX=3662 GN=LOC111435061 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 1.9e-68
Identity = 127/152 (83.55%), Postives = 133/152 (87.50%), Query Frame = 0


Query: 8   EEPPPCEAEKPNSLLPTTSCGCYRLSCFGSRRETAGAPSWWERVRASQAHGEGRWWLRGV 67
           EEPP CEA+K NSLLPTTSCGC RLSCFGSRR  AG PSWWER+RAS+ H EGRWW RGV
Sbjct: 7   EEPPSCEADKSNSLLPTTSCGCSRLSCFGSRRTAAGGPSWWERIRASEVHNEGRWWARGV 66

Query: 68  RVLLKLREWSEIVAGPRWKTFIRRFNRNRSGG-GGARVGKFQYDPLSYAMNFDEGSGQIG 127
           RVLLKLREWSEIVAGPRWKTFIRRFNRNRSG    AR GKFQYDPLSYAMNFDEGSGQIG
Sbjct: 67  RVLLKLREWSEIVAGPRWKTFIRRFNRNRSGATAAARPGKFQYDPLSYAMNFDEGSGQIG 126

Query: 128 ELEDDMDDYSGFRNFSARYASIPAPLKTGVIT 159
           EL+DD+DD+SGFRNFSARYASIP  LKT   T
Sbjct: 127 ELDDDIDDFSGFRNFSARYASIPGSLKTAGTT 158

[Close]

BLAST of Sed0019889 vs. ExPASy TrEMBL
Match: A0A5D3BK38 (Putative Serine/arginine repetitive matrix protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001870 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 1.0e-66
Identity = 123/160 (76.88%), Postives = 133/160 (83.12%), Query Frame = 0


Query: 4   NTDLEEPPPCEAEKPNSLLPTTSCGCYRLSCFGSRRETAGAPSWWERVRASQAHGEGRWW 63
           + D EE P CEA+K NSLLPT  CGC+RLSCFGSRR     PSWWER+RASQ H EGRWW
Sbjct: 5   DVDQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSEGRWW 64

Query: 64  LRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRS--------GGGGARVGKFQYDPLSYA 123
            RGV+V+LKLREWSEIVAGPRWKTFIRRFNRNRS        GG G R GKFQYDPLSYA
Sbjct: 65  ARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGGGGGGSGVRAGKFQYDPLSYA 124

Query: 124 MNFDEGSGQIGELEDDMDDYSGFRNFSARYASIPAPLKTG 156
           MNFDEGS QIGEL+DDMDD++G+RNFSARYASIPAPLKTG
Sbjct: 125 MNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTG 164

[Close]

BLAST of Sed0019889 vs. ExPASy TrEMBL
Match: A0A6J1E188 (uncharacterized protein LOC111429865 OS=Cucurbita moschata OX=3662 GN=LOC111429865 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 1.0e-66
Identity = 123/157 (78.34%), Postives = 133/157 (84.71%), Query Frame = 0


Query: 3   ANTDLEEPPPCEAEKPNSLLPTTSCGCYRLSCFGSRRETAGAPSWWERVRASQAHGEGRW 62
           A  D EEPPPCE +  NSLLPTT CGC+RLSC   RR  A  PSWWER+RASQ H EGRW
Sbjct: 2   AYPDAEEPPPCEVDNSNSLLPTTRCGCFRLSCLEFRRAVAVGPSWWERIRASQVHSEGRW 61

Query: 63  WLRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGGGA-RVGKFQYDPLSYAMNFDEG 122
           W RGVRV+LK+REWSEIVAGPRWKTFIRRFNRNR+GG GA R GKFQYDPLSYAMNFDEG
Sbjct: 62  WARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGAGAGRPGKFQYDPLSYAMNFDEG 121

Query: 123 SGQIGELEDDMDDYSGFRNFSARYASIPAPLKTGVIT 159
           S QIGEL+DD DD++G+RNFSARYASIPAPLKTG  T
Sbjct: 122 SRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTT 158

[Close]

BLAST of Sed0019889 vs. ExPASy TrEMBL
Match: A0A1S3BVG0 (uncharacterized protein LOC103493921 OS=Cucumis melo OX=3656 GN=LOC103493921 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 1.0e-66
Identity = 123/160 (76.88%), Postives = 133/160 (83.12%), Query Frame = 0


Query: 4   NTDLEEPPPCEAEKPNSLLPTTSCGCYRLSCFGSRRETAGAPSWWERVRASQAHGEGRWW 63
           + D EE P CEA+K NSLLPT  CGC+RLSCFGSRR     PSWWER+RASQ H EGRWW
Sbjct: 5   DVDQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSEGRWW 64

Query: 64  LRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRS--------GGGGARVGKFQYDPLSYA 123
            RGV+V+LKLREWSEIVAGPRWKTFIRRFNRNRS        GG G R GKFQYDPLSYA
Sbjct: 65  ARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGGGGGGSGVRAGKFQYDPLSYA 124

Query: 124 MNFDEGSGQIGELEDDMDDYSGFRNFSARYASIPAPLKTG 156
           MNFDEGS QIGEL+DDMDD++G+RNFSARYASIPAPLKTG
Sbjct: 125 MNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTG 164

[Close]

BLAST of Sed0019889 vs. TAIR 10
Match: AT3G01430.1 (BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT5G14890.1); Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 108.6 bits (270), Expect = 4.8e-24
Identity = 65/173 (37.57%), Postives = 94/173 (54.34%), Query Frame = 0


Query: 8   EEPPPCEAEKPN----SLLPTTSCGCYRLSCFGSRR-ETAGAPSWWERV-RASQAHGEGR 67
           + PP  E +  +    +L     C C+ + C  S +  T G   WW+R+    +   + R
Sbjct: 4   QSPPIAEVDATDDMHEALFAKRGC-CFLMPCLASSQPSTRGGSVWWQRITTVDKLEPDER 63

Query: 68  WWLRGVRVLLKLREWSEIVAGPRWKTFIRRFNR-NRSGGGGARV---------------- 127
           WW+RG R   ++REWSE+VAGPRWKT+IRRF R N  GGGG RV                
Sbjct: 64  WWIRGWR---RMREWSELVAGPRWKTYIRRFGRSNCCGGGGGRVGNSSGGCGGGAMPNRS 123

Query: 128 ---GKFQYDPLSYAMNFDEGSGQIGELEDDMDDYSGFRNFSARYASIPAPLKT 155
              GKF+YD LSY++NFD+G+ Q G  +D+      +R++S R+A+   P+ T
Sbjct: 124 SDQGKFRYDQLSYSLNFDDGN-QTGHFDDEFP----YRDYSMRFAAPSLPVST 167

[Close]

BLAST of Sed0019889 vs. TAIR 10
Match: AT5G62865.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48020.1). )

HSP 1 Score: 107.5 bits (267), Expect = 1.1e-23
Identity = 67/134 (50.00%), Postives = 81/134 (60.45%), Query Frame = 0


Query: 27  CGCYRLSCFGSRRETAGAPSWWERVRA------SQAHG-EGRWWLRGVRVLLKLREWSEI 86
           C C+  S   SR  TA   S W R+R       S  HG E RWW   +R  LK+REWSEI
Sbjct: 20  CCCFP-SFRRSRSSTAVGYSSWGRIRTVDDSNHSGDHGDEPRWW---IRASLKIREWSEI 79

Query: 87  VAGPRWKTFIRRFNRN-RSGGGGARVGKFQYDPLSYAMNFDEGSGQIGELEDDMDDY--- 146
           VAGPRWKTFIRRFNR+ R G       KFQYDPLSY++NFD+        +D+ D+Y   
Sbjct: 80  VAGPRWKTFIRRFNRDPRRGRDWDASEKFQYDPLSYSLNFDD--------DDEEDEYVGL 139

Query: 147 SGFRNFSARYASIP 150
            G R+FS R+AS+P
Sbjct: 140 GGLRSFSTRFASVP 141

[Close]

BLAST of Sed0019889 vs. TAIR 10
Match: AT3G48020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62865.1); Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 107.1 bits (266), Expect = 1.4e-23
Identity = 63/137 (45.99%), Postives = 79/137 (57.66%), Query Frame = 0


Query: 14  EAEKPNSLLPTTSCGCYRLSCFGSRRETAGAPSWWERVRASQAHGEGRWWLRGVRVLLKL 73
           E  + N LL  +SC      C      T    SWW+R+  +  H E RWW   VR  LK+
Sbjct: 2   EVGQANPLLGESSC------C-----STTVKSSWWQRIHRNN-HQEPRWW---VRAFLKI 61

Query: 74  REWSEIVAGPRWKTFIRRFNRN-RSGGGGARVGKFQYDPLSYAMNFDEGSGQIGELEDDM 133
           REWSEIVAGPRWKTFIRRFNR+ R G       KF+YDP+SY ++F++        +DD 
Sbjct: 62  REWSEIVAGPRWKTFIRRFNRDPRRGQDWDDSDKFRYDPVSYTLSFEDEDKD----DDDE 119

Query: 134 DDYSGFRNFSARYASIP 150
               G R+FS RYAS+P
Sbjct: 122 AGVGGVRSFSMRYASVP 119

[Close]

BLAST of Sed0019889 vs. TAIR 10
Match: AT5G14890.1 (NHL domain-containing protein )

HSP 1 Score: 104.0 bits (258), Expect = 1.2e-22
Identity = 57/135 (42.22%), Postives = 79/135 (58.52%), Query Frame = 0


Query: 29  CYRLSCFGSRRETAGAPS-WWERVR-ASQAHGEGRWWLRGVRVLLKLREWSEIVAGPRWK 88
           C+ L C GS + +    S WW+R+R   +   + RWW+ G    +K+REWSEIVAGP+WK
Sbjct: 611 CFILPCLGSSQPSGPNGSVWWQRIRTVDKLEPDERWWVSG---WMKMREWSEIVAGPKWK 670

Query: 89  TFIRRFNRNRSGGGGARVG-------KFQYDPLSYAMNFDEGSGQIGELEDDMDDYSGFR 148
           TFIRRF RN    GG   G        F+YD  SY++NFD+G  Q G  ED+      +R
Sbjct: 671 TFIRRFGRNHCCNGGIDGGCNRPEHVSFRYDSWSYSLNFDDGK-QTGHFEDEFP----YR 730

Query: 149 NFSARYASIPAPLKT 155
           ++S R+A+   P+ T
Sbjct: 731 DYSMRFAAPSLPVST 737

[Close]

BLAST of Sed0019889 vs. TAIR 10
Match: AT5G25240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 49.7 bits (117), Expect = 2.6e-06
Identity = 36/98 (36.73%), Postives = 44/98 (44.90%), Query Frame = 0


Query: 27  CGCYRLSCFGSRRETAGAPSWWERVRAS---QAHGEGRWWLRGVRVLLKLREWSEIVAGP 86
           CGC     F   R   G      R   S   Q    G W   G   L  L+E SE +AGP
Sbjct: 20  CGCGYFRSFSFTRWRRGDDESRSRGGWSGCLQEERRGNW---GSEKLKGLKEISEKIAGP 79

Query: 87  RWKTFIRRFNRNRSGGGGARVGKFQYDPLSYAMNFDEG 122
           +WK FIR F+  R      R   F YD  +Y++NFD+G
Sbjct: 80  KWKNFIRSFSSGRK--KMRRDVDFTYDLKNYSLNFDDG 112

The following BLAST results are available for this feature:

BLAST of Sed0019889 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878924.1	7.8e-69	81.94	uncharacterized protein LOC120071012 [Benincasa hispida]	[more]
KAG6587481.1	3.9e-68	84.11	hypothetical protein SDJN03_16046, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022928159.1	3.9e-68	83.55	uncharacterized protein LOC111435061 [Cucurbita moschata] >XP_023530985.1 unchar...	[more]
XP_023003975.1	3.9e-68	83.55	uncharacterized protein LOC111497423 [Cucurbita maxima]	[more]
KAG7021468.1	3.9e-68	83.55	putative alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10 [Cucurbita ar...	[more]

BLAST of Sed0019889 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0019889 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KTA4	1.9e-68	83.55	uncharacterized protein LOC111497423 OS=Cucurbita maxima OX=3661 GN=LOC111497423...	[more]
A0A6J1EK25	1.9e-68	83.55	uncharacterized protein LOC111435061 OS=Cucurbita moschata OX=3662 GN=LOC1114350...	[more]
A0A5D3BK38	1.0e-66	76.88	Putative Serine/arginine repetitive matrix protein 2 OS=Cucumis melo var. makuwa...	[more]
A0A6J1E188	1.0e-66	78.34	uncharacterized protein LOC111429865 OS=Cucurbita moschata OX=3662 GN=LOC1114298...	[more]
A0A1S3BVG0	1.0e-66	76.88	uncharacterized protein LOC103493921 OS=Cucumis melo OX=3656 GN=LOC103493921 PE=...	[more]

BLAST of Sed0019889 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01430.1	4.8e-24	37.57	BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:...	[more]
AT5G62865.1	1.1e-23	50.00	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G48020.1	1.4e-23	45.99	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G14890.1	1.2e-22	42.22	NHL domain-containing protein	[more]
AT5G25240.1	2.6e-06	36.73	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR47076	NHL DOMAIN PROTEIN	coord: 13..154
None	No IPR available	PANTHER	PTHR47076:SF9	BNAA06G16930D PROTEIN	coord: 13..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0019889.1	Sed0019889.1	mRNA