Sed0019877 (gene) Chayote v1

Overview


Name	Sed0019877
Type	gene
Organism	Sechium edule (Chayote v1)
Description	DEAD-box ATP-dependent RNA helicase 36
Location	LG01: 5700691 .. 5705549 (-)
RNA-Seq Expression	Sed0019877
Synteny	Sed0019877

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTGCCCTAATTGAACCGGTTAGATTTTGGTGGTGGCCGCCATCGCCAACACTTCAACATAAGAATAAAGAGATCAATCAGTGAAGCAATCAAAATTCTGCTGCAATTTTCGTTGAATTGTTGTTTATCAGCTCCAATTCCATGGATCAAGAAGTGACCGTCGACGAGAATTTCCCACTCTTCTCAAAATCCCACCGGAAAAACAACAAACCATCCCCAAAACCTACCGGCGCCGCCGTTTCCACCGCCGTCGACACCATCGTTGCGAACAAAACCCCCATTCAGATTGAGAAACACACAGAACTCACCTCTGAATCCACCGACGACGTCACATTCGCCGATCTCGGCTTATCGGAGTGGATCGTCGAGACCTGCAAGGAATTGGCTATGAAGAAGCCGACGGCGGTGCAAACCCACTGCATCCCGAAGATTCTGGCGGGGCTGGACGTGCTCGGTCTTGCGCAAACTGGGAGTGGGAAGACTGCTGCGTTTGCGTTGCCGATTCTTCAACGCCTTTCCGAGACCCCTTTTGGGGTATTTGCGTTGGTGATTACTCCCACTAGGGAGTTGGCTTATCAATTGGCTGAGCAGTTTAGGGCTCTTGGTTCTTGCTTGAATTTGCGGTGCTCTGTTATTGTTGGAGGAATGAATATGTTGAACCAGACGCAGAGTTTGTTGAAGAGACCTCATATTGTTGTTGCAACTCCTGGGAGAGTTAAGGTTTTGCTGGAGGAGAATCCTGACATCCCTCTCATCTTCTCGAGGACTAAGGTTTGTTCATTTTGTTCTTTGTTTCTTTTTAGCTTCTTTTGTTCTAGTAGTTCTATTTAATTTGAATGTGATGAGGAATTAGGTGTTGGAGGATTGATGGGTAATGCATTCCTAAAAGAAATATCAGTTTCCAAAAGTGGAAAAAATGTCATCCATGTTCTAACATGGGTTTAATAGCTGCTTGGGGCCTCCAAGGTATGCTCCCTTGGAGGTCTAAGCTTCGAGACCCATGAGTTGAGCTTAATTGTAAAATGTCTCTTGGGTCCGGGCCTTGGGACAGGTGTGAGTGTCCATGGGTATATGAGAGCGAAGCTCCAATTCTAACAGCTAAGGGGTGGTGCGGTGGTTGAAGGTTAGGGTTTGAAGGTGTGTTCCCCTAAGGTTCAAGGTTCGAGATTGACTTGTGATATTAATTTGTAGACAACTCTCATGTCTCCATTCATTTGATGTCTCCCAGTGCCTGGCCGAGGGACAGGTGTGGTTATCGTAGTATAGTGGAGCGAATCTCCGAAAAAATAGCCAAGCATTTGTCAATATACGATCAGTCTTGTTGGTAACTGAGATGAGAGGAAACTTTCGTTTCAAAATGGTTAAGTTAAAACCGAAGAGAAGAACACAACAATGCAAGCGTCGTTTCTTTTTCTTGTGTGTGAAAAAGCTAAAATTGAAGAAGTCCATTCGTTGTTTCACAGTTGCTTGTCTTGCTCCTATTGTTCAAGTTCTTATAGCTGGATTAGCCCATAGCCTTTTAGAATATGATATACTTTGCAAATGTATGCTAAATTGCTGGTGTTCTTAACTTTTTATTGATATTTTTATACTTCAGTTCCTCATTCTAGATGAAGCTGATAGAGTATTGGATGTTGGCTTTGAAGAGGAGTTGAAAGTAATCTTTCAATGCTTGCCACGTAACCGACAAACTCTATTATTCTCTGCAACAATGACAAAGGATCTGGAAACATTGCTTGAGCTTTCTGCAAACAAGGCTTACTTTTACGAGGCTTATGAAGGTTTCAAGACAGTTGATATGTTAAAGCAGCAATATGTATTTATTCCAAAGAATGTGAAGGATGTCTACCTACTACATATTTTGTCTAAAATGGAAGACATGGGTATTCGATCAGCAATCATATTTACACAAACTTGCAAGTATGACTTTTTTTTGGCCTTTACCTCCTCATTGTTCCCTCTCTCTCTCTCTCACTATTTACTTTTTCTACAACTGTATGCAGAATTTGTCACCATTTAGGTTTGTTACTTGAAGAACTTGATCAGGAGATGGTGGCTTTGCATTCATTCAAGTCACAGGCTGAGAGGCTTTCTGCACTTTATCGATTCAAATCAGGACGTGTTCCTGTATTGCTTGCAACTGATGTTGCCAGTCGGGGTTTGGACATTCCAACGGTTGATCTCGTTATCAATTACGATATTCCAAGGTAGGCTTTAATTGATTTCACACGCGCCTAAGATGAAGTTTTATAAGAATGTTGGTGCCATAAATTTAATGACACTTTAATACAGGTTTCCCAGAGATTATGTTCACCGTGTAGGGCGTACTGCAAGAGCAGGTAGAGGTGGATTGGCTGTGAGCTTTATTACCCAGGTGTGCGTTTCTAAAATGGTGGACAATTTTAACTAACTCCATATGTTTCTTGGAGATGAGATCATCAACAAATGTTAAAATTTTCGTTTTTGAAATTGTTTTTCATTTAATGTGGATAGTAATTGATCGTGGGTTGGCCTACTAGTCAATTAAGGGGCTTGTAGTTTTGTAAAATTGGAATTATTAAATTGTTTATGGTGCGTTTGGAGCACCGGTTTGGTTATTATAGACGGAAGGTTATGATAAACGGTGAGTTATGATAAACGGTGGTTTATTATAAATGGTGTTTGAGGGGCAAGTTATTATAACAAGAATTATGATAAACGGTGTTTGAGGGACTGGTTATGTAACAAAAAGTAATATATGTAAGGTGTAGATAAACGGGCACATAGGTTTAGATAAACTGGCATTAGGTAACCACCGTTTACATAAACTCGGCCGTTTACATAAACGGGGGCCCAAACACACCCTTAGAGATCATACTTCTGTGGCCACCTATCTAGGAATTAATTTTCTACGAATTATCTCTACAACTAAATGTAGTAGATTGAGACGATTGTCCTATTAGAATGGATGAAATGCGCTTAAGCTGAACACTTAATGGATATAAAAAGATGGAGTGAATAGTAACTTTGTATCAATAAGCTGCATTATACTAATGATAGATTAGTTTTAAAAGAAACTTGTAATGTTTAAGCGGATTTGTAACTGGTCTACATTATAATGCTTCTCTTGCAATTGAATAATCTACCATGGTATACATGCAGGAAAGTAGCAAGTTGCTAATGTTTTTGTTTTCATCTCTTTAAGCAAGTGTTTTTCCTTGGACTTCCTGTTTTTTTTACCTTTGATAAATGCCGATTCGGTTTGCAGAATGATGTGGAGCTTATTCATGAAATAGAGGCCAATCTAGGAAAACAATTGGAGTCTTTTGAATGCAAGGAAGATGAGGTGCTTGAGAATATTACAAAAGTAAGTTCTGAATGCTCTGGCTTTTTTCGCCCAATTTGAGAACAGAACTTTGAATTTGTGAATCAAATTTTCGGCGTGTTATATGTTATTTGCCCTTTGAACTTTCATAACTTATCTCATCTGAGTAGTTAACTTCTGCATGCGGACTTCCTTCTGATTTCCCTTAAAAAGTTGGAAACATAACATGTAGGGTTCACTTCTTTCTTACCACGAGCCGAATCATGCTAACTTGGAAAATCGAATTCCTGCACTCTAGTTCAATACATTATGCGTATTCATGGTGTCCACCTACCTAAGAAATAATTTTTTAGAAGTTTCCTTAACATCCAAATGTTGTATAGTCAAGCAGTATGTTTTGTGGGAATAGTCGAGGTGCACGTAAATTGGTCTGGGCACTCACGAGTCACGGATATAAAAAGAATAGTCATGGGCATGATAATATCTTTTCTCGAACAAATCGTTCTAGAGAAGGGATCAGTTTTTTTAGTGTTTTAAGGCTTATGGGATGAATCCTGTAAGCTATGGTTGTTTGCAATTATTTTCCGTAATCTGGTAAGCCTAGAAACTTGTTTCTGTCAAAAGCTTATGAATTGTTTAGCTCTCTGGTTGCATCGGTCATTTTACAGCTGAAATACAAGTTTGGACCGAACAGTAGAGATGCCACATTGGTACGATAGGACACAGCTCGAACAGCTCTCTACCGCTGTTTATGCATGAAATGACTATATTACTAAAACTTCTATAGATTAAAATACGAATGCCTCAACGTTCGGGCGGGCATTTGTTGTCAGCATATCAGAAGCGCATTGAGTTTAATTTAGCTTGGAATGTTGGTATGCAGGTTTACAAGGCTAGACGTGTAGCAGCAATGAAAATGGTGGATGATGGATTTGAGGAGAAAGTGAAAGAACGAAAGGAACAGAAACTAAAAACATTGTCTGAGAAAGGGTTATTGAAGAAAAAAAACAGCAGAAAGAGAAGAAGAGAAAAAACTTCCAAGGCAGTTGTATGAAAATCTCACCCACTTCATTGGAGTTGTATGAAAGAAAAAAAAAACACCCACTTCAATTTTTGTTTTGTTGACTTAAGAATTTGAAGCTTTGCTCCTCTAAACCGGGAGGCACGACTTCAAAATTTTGATGTTTCATATTTAACACTTCTGTAATTATTTCCTAGGGGCTTAATTTATTTTTGTAGAGTGACATTCGAGTGGGGTTCTTAGCTTTTTGTTTCTACTTTTCTGTAAAATGTTAATGTTTCAACGTAATTTTTTTTTTCTGAATTAAAAAACAATGGAATGGGGGGTTGTTGATTTTGAATACATGACATATTCGTGACATCTTGGTTAATGGACAAACAATGTGCAATAGATCTTTGTTAAAATTTTAAAATTTTTTGTTATAACTCTGATTTTGTTTTTAATTGTTTATATTCGTTTTATTTTTTTGCTCTTTAGGAGGAGAATATTTCTAATGTGGATTTTATGTTAGAGAACAGAATAATGAATTTGAT

mRNA sequence

TTTTGCCCTAATTGAACCGGTTAGATTTTGGTGGTGGCCGCCATCGCCAACACTTCAACATAAGAATAAAGAGATCAATCAGTGAAGCAATCAAAATTCTGCTGCAATTTTCGTTGAATTGTTGTTTATCAGCTCCAATTCCATGGATCAAGAAGTGACCGTCGACGAGAATTTCCCACTCTTCTCAAAATCCCACCGGAAAAACAACAAACCATCCCCAAAACCTACCGGCGCCGCCGTTTCCACCGCCGTCGACACCATCGTTGCGAACAAAACCCCCATTCAGATTGAGAAACACACAGAACTCACCTCTGAATCCACCGACGACGTCACATTCGCCGATCTCGGCTTATCGGAGTGGATCGTCGAGACCTGCAAGGAATTGGCTATGAAGAAGCCGACGGCGGTGCAAACCCACTGCATCCCGAAGATTCTGGCGGGGCTGGACGTGCTCGGTCTTGCGCAAACTGGGAGTGGGAAGACTGCTGCGTTTGCGTTGCCGATTCTTCAACGCCTTTCCGAGACCCCTTTTGGGGTATTTGCGTTGGTGATTACTCCCACTAGGGAGTTGGCTTATCAATTGGCTGAGCAGTTTAGGGCTCTTGGTTCTTGCTTGAATTTGCGGTGCTCTGTTATTGTTGGAGGAATGAATATGTTGAACCAGACGCAGAGTTTGTTGAAGAGACCTCATATTGTTGTTGCAACTCCTGGGAGAGTTAAGGTTTTGCTGGAGGAGAATCCTGACATCCCTCTCATCTTCTCGAGGACTAAGTTCCTCATTCTAGATGAAGCTGATAGAGTATTGGATGTTGGCTTTGAAGAGGAGTTGAAAGTAATCTTTCAATGCTTGCCACGTAACCGACAAACTCTATTATTCTCTGCAACAATGACAAAGGATCTGGAAACATTGCTTGAGCTTTCTGCAAACAAGGCTTACTTTTACGAGGCTTATGAAGGTTTCAAGACAGTTGATATGTTAAAGCAGCAATATGTATTTATTCCAAAGAATGTGAAGGATGTCTACCTACTACATATTTTGTCTAAAATGGAAGACATGGGTATTCGATCAGCAATCATATTTACACAAACTTGCAAAATTTGTCACCATTTAGGTTTGTTACTTGAAGAACTTGATCAGGAGATGGTGGCTTTGCATTCATTCAAGTCACAGGCTGAGAGGCTTTCTGCACTTTATCGATTCAAATCAGGACGTGTTCCTGTATTGCTTGCAACTGATGTTGCCAGTCGGGGTTTGGACATTCCAACGGTTGATCTCGTTATCAATTACGATATTCCAAGGTTTCCCAGAGATTATGTTCACCGTGTAGGGCGTACTGCAAGAGCAGGTAGAGGTGGATTGGCTGTGAGCTTTATTACCCAGAATGATGTGGAGCTTATTCATGAAATAGAGGCCAATCTAGGAAAACAATTGGAGTCTTTTGAATGCAAGGAAGATGAGGTGCTTGAGAATATTACAAAAGTTTACAAGGCTAGACGTGTAGCAGCAATGAAAATGGTGGATGATGGATTTGAGGAGAAAGTGAAAGAACGAAAGGAACAGAAACTAAAAACATTGTCTGAGAAAGGGTTATTGAAGAAAAAAAACAGCAGAAAGAGAAGAAGAGAAAAAACTTCCAAGGCAGTTGTATGAAAATCTCACCCACTTCATTGGAGTTGTATGAAAGAAAAAAAAAACACCCACTTCAATTTTTGTTTTGTTGACTTAAGAATTTGAAGCTTTGCTCCTCTAAACCGGGAGGCACGACTTCAAAATTTTGATGTTTCATATTTAACACTTCTGTAATTATTTCCTAGGGGCTTAATTTATTTTTGTAGAGTGACATTCGAGTGGGGTTCTTAGCTTTTTGTTTCTACTTTTCTGTAAAATGTTAATGTTTCAACGTAATTTTTTTTTTCTGAATTAAAAAACAATGGAATGGGGGGTTGTTGATTTTGAATACATGACATATTCGTGACATCTTGGTTAATGGACAAACAATGTGCAATAGATCTTTGTTAAAATTTTAAAATTTTTTGTTATAACTCTGATTTTGTTTTTAATTGTTTATATTCGTTTTATTTTTTTGCTCTTTAGGAGGAGAATATTTCTAATGTGGATTTTATGTTAGAGAACAGAATAATGAATTTGAT

Coding sequence (CDS)

ATGGATCAAGAAGTGACCGTCGACGAGAATTTCCCACTCTTCTCAAAATCCCACCGGAAAAACAACAAACCATCCCCAAAACCTACCGGCGCCGCCGTTTCCACCGCCGTCGACACCATCGTTGCGAACAAAACCCCCATTCAGATTGAGAAACACACAGAACTCACCTCTGAATCCACCGACGACGTCACATTCGCCGATCTCGGCTTATCGGAGTGGATCGTCGAGACCTGCAAGGAATTGGCTATGAAGAAGCCGACGGCGGTGCAAACCCACTGCATCCCGAAGATTCTGGCGGGGCTGGACGTGCTCGGTCTTGCGCAAACTGGGAGTGGGAAGACTGCTGCGTTTGCGTTGCCGATTCTTCAACGCCTTTCCGAGACCCCTTTTGGGGTATTTGCGTTGGTGATTACTCCCACTAGGGAGTTGGCTTATCAATTGGCTGAGCAGTTTAGGGCTCTTGGTTCTTGCTTGAATTTGCGGTGCTCTGTTATTGTTGGAGGAATGAATATGTTGAACCAGACGCAGAGTTTGTTGAAGAGACCTCATATTGTTGTTGCAACTCCTGGGAGAGTTAAGGTTTTGCTGGAGGAGAATCCTGACATCCCTCTCATCTTCTCGAGGACTAAGTTCCTCATTCTAGATGAAGCTGATAGAGTATTGGATGTTGGCTTTGAAGAGGAGTTGAAAGTAATCTTTCAATGCTTGCCACGTAACCGACAAACTCTATTATTCTCTGCAACAATGACAAAGGATCTGGAAACATTGCTTGAGCTTTCTGCAAACAAGGCTTACTTTTACGAGGCTTATGAAGGTTTCAAGACAGTTGATATGTTAAAGCAGCAATATGTATTTATTCCAAAGAATGTGAAGGATGTCTACCTACTACATATTTTGTCTAAAATGGAAGACATGGGTATTCGATCAGCAATCATATTTACACAAACTTGCAAAATTTGTCACCATTTAGGTTTGTTACTTGAAGAACTTGATCAGGAGATGGTGGCTTTGCATTCATTCAAGTCACAGGCTGAGAGGCTTTCTGCACTTTATCGATTCAAATCAGGACGTGTTCCTGTATTGCTTGCAACTGATGTTGCCAGTCGGGGTTTGGACATTCCAACGGTTGATCTCGTTATCAATTACGATATTCCAAGGTTTCCCAGAGATTATGTTCACCGTGTAGGGCGTACTGCAAGAGCAGGTAGAGGTGGATTGGCTGTGAGCTTTATTACCCAGAATGATGTGGAGCTTATTCATGAAATAGAGGCCAATCTAGGAAAACAATTGGAGTCTTTTGAATGCAAGGAAGATGAGGTGCTTGAGAATATTACAAAAGTTTACAAGGCTAGACGTGTAGCAGCAATGAAAATGGTGGATGATGGATTTGAGGAGAAAGTGAAAGAACGAAAGGAACAGAAACTAAAAACATTGTCTGAGAAAGGGTTATTGAAGAAAAAAAACAGCAGAAAGAGAAGAAGAGAAAAAACTTCCAAGGCAGTTGTATGA

Protein sequence

MDQEVTVDENFPLFSKSHRKNNKPSPKPTGAAVSTAVDTIVANKTPIQIEKHTELTSESTDDVTFADLGLSEWIVETCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQRLSETPFGVFALVITPTRELAYQLAEQFRALGSCLNLRCSVIVGGMNMLNQTQSLLKRPHIVVATPGRVKVLLEENPDIPLIFSRTKFLILDEADRVLDVGFEEELKVIFQCLPRNRQTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHILSKMEDMGIRSAIIFTQTCKICHHLGLLLEELDQEMVALHSFKSQAERLSALYRFKSGRVPVLLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDVELIHEIEANLGKQLESFECKEDEVLENITKVYKARRVAAMKMVDDGFEEKVKERKEQKLKTLSEKGLLKKKNSRKRRREKTSKAVV

Homology

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BLAST of Sed0019877 vs. NCBI nr
Match: XP_022149766.1 (DEAD-box ATP-dependent RNA helicase 36 [Momordica charantia])

HSP 1 Score: 858.6 bits (2217), Expect = 2.7e-245
Identity = 442/499 (88.58%), Postives = 476/499 (95.39%), Query Frame = 0


Query: 1   MDQEVTVDENFPLFSKSHRKNNKPSPKPTGAAVSTAVDTIVANKTPIQIEKHTELTSEST 60
           MD+EVTVDENFPLF+KSHRK +KPS  PTG  VST V+TI A+K P+Q+EK T+L + ST
Sbjct: 1   MDEEVTVDENFPLFAKSHRKKHKPSQNPTGGPVSTIVETI-ASKKPLQVEKSTDLATTST 60

Query: 61  DDVTFADLGLSEWIVETCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALP 120
           ++VTFADLGLSEWIV TCKELAM+KPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALP
Sbjct: 61  NNVTFADLGLSEWIVRTCKELAMRKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALP 120

Query: 121 ILQRLSETPFGVFALVITPTRELAYQLAEQFRALGSCLNLRCSVIVGGMNMLNQTQSLLK 180
           ILQRLSETPFGVFALV+TPTRELAYQLAEQFRALGS L+LRCSV+VGGM+MLNQ QSLLK
Sbjct: 121 ILQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLHLRCSVVVGGMDMLNQAQSLLK 180

Query: 181 RPHIVVATPGRVKVLLEENPDIPLIFSRTKFLILDEADRVLDVGFEEELKVIFQCLPRNR 240
           RPHIV+ATPGRVKVLLEENPDIPL+FS+TKFL+LDEADRVLDVGFEEELKVIFQCLPRNR
Sbjct: 181 RPHIVIATPGRVKVLLEENPDIPLVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNR 240

Query: 241 QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHILS 300
           QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTV+MLKQQYVFIPKNVKDVYLLHILS
Sbjct: 241 QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVEMLKQQYVFIPKNVKDVYLLHILS 300

Query: 301 KMEDMGIRSAIIFTQTCKICHHLGLLLEELDQEMVALHSFKSQAERLSALYRFKSGRVPV 360
           KMEDMGIRSAIIF QTC+ CH LGLLLEELDQE+ ALHSFKSQ++RL+ALYRFKSG+VPV
Sbjct: 301 KMEDMGIRSAIIFVQTCRSCHLLGLLLEELDQEVAALHSFKSQSQRLAALYRFKSGQVPV 360

Query: 361 LLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDVELIH 420
           LLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDVELIH
Sbjct: 361 LLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDVELIH 420

Query: 421 EIEANLGKQLESFECKEDEVLENITKVYKARRVAAMKMVDDGFEEKVKERKEQKLKTLSE 480
           EIEA +GKQLE+FECKE+EVLENITKVYKARRVAAMKMVDDGFEEKVKERK+QK KTL+E
Sbjct: 421 EIEAVVGKQLENFECKENEVLENITKVYKARRVAAMKMVDDGFEEKVKERKKQKQKTLAE 480

Query: 481 KGLLKKKNSRKRRREKTSK 500
           KGLLKKK   K+RREKTS+
Sbjct: 481 KGLLKKKKRSKKRREKTSE 498

[Close]

BLAST of Sed0019877 vs. NCBI nr
Match: KAG6605347.1 (DEAD-box ATP-dependent RNA helicase 36, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035305.1 DEAD-box ATP-dependent RNA helicase 36 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 858.2 bits (2216), Expect = 3.5e-245
Identity = 448/500 (89.60%), Postives = 477/500 (95.40%), Query Frame = 0


Query: 1   MDQEVTVDENFPLFSKSHRKNNKPSPK-PTGAAVSTAVDTIVANKTPIQIEKHTELTSES 60
           MDQEVTVDENFPLFSKSHRK +KPS K PT AAVST+VD   A K PIQIEK TELT++S
Sbjct: 1   MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAAVSTSVDN-TAEKAPIQIEKSTELTTKS 60

Query: 61  TDDVTFADLGLSEWIVETCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFAL 120
           T +VTFADLGLSEWIV+TCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFAL
Sbjct: 61  T-NVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFAL 120

Query: 121 PILQRLSETPFGVFALVITPTRELAYQLAEQFRALGSCLNLRCSVIVGGMNMLNQTQSLL 180
           PILQ+LSETPFGVFALV+TPTRELAYQLAEQFRALGS LNLRCSV+VGGM+MLNQTQSLL
Sbjct: 121 PILQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLL 180

Query: 181 KRPHIVVATPGRVKVLLEENPDIPLIFSRTKFLILDEADRVLDVGFEEELKVIFQCLPRN 240
           KRPHIV+ATPGRVKVLLEENPDIP +FS+TKFL+LDEADRVLDVGFEEELKVIF+CLPRN
Sbjct: 181 KRPHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRN 240

Query: 241 RQTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIL 300
           RQTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHI+
Sbjct: 241 RQTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIM 300

Query: 301 SKMEDMGIRSAIIFTQTCKICHHLGLLLEELDQEMVALHSFKSQAERLSALYRFKSGRVP 360
           SKM+DMG+RSAIIF  TCK CHHLGLLLEELDQ++ ALHSFKSQ+ERL+ALYRFKSG+ P
Sbjct: 301 SKMKDMGVRSAIIFVHTCKSCHHLGLLLEELDQDVAALHSFKSQSERLAALYRFKSGQAP 360

Query: 361 VLLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDVELI 420
           VLLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGR GLAVSFITQNDVELI
Sbjct: 361 VLLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRHGLAVSFITQNDVELI 420

Query: 421 HEIEANLGKQLESFECKEDEVLENITKVYKARRVAAMKMVDDGFEEKVKERKEQKLKTLS 480
           HEIEANLGK+LE FECKE+EVLEN+TKVYKARRVAAMKMVDDGFEEKVKERK+QK KTL+
Sbjct: 421 HEIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKTLA 480

Query: 481 EKGLLKKKNSRKRRREKTSK 500
           EKGLLKK+ SRKRRREK SK
Sbjct: 481 EKGLLKKR-SRKRRREKASK 497

[Close]

BLAST of Sed0019877 vs. NCBI nr
Match: XP_022947338.1 (DEAD-box ATP-dependent RNA helicase 36 [Cucurbita moschata] >XP_022947339.1 DEAD-box ATP-dependent RNA helicase 36 [Cucurbita moschata])

HSP 1 Score: 854.0 bits (2205), Expect = 6.6e-244
Identity = 447/500 (89.40%), Postives = 475/500 (95.00%), Query Frame = 0


Query: 1   MDQEVTVDENFPLFSKSHRKNNKPSPK-PTGAAVSTAVDTIVANKTPIQIEKHTELTSES 60
           MDQEVTVDENFPLFSKSHRK +KPS K PT AAVS AVD   A K PIQIEK TELT++S
Sbjct: 1   MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAAVSAAVDN-TAEKAPIQIEKSTELTTKS 60

Query: 61  TDDVTFADLGLSEWIVETCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFAL 120
           T +VTFADLGLSEWIV+TCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFAL
Sbjct: 61  T-NVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFAL 120

Query: 121 PILQRLSETPFGVFALVITPTRELAYQLAEQFRALGSCLNLRCSVIVGGMNMLNQTQSLL 180
           PILQ+LSETPFGVFALV+TPTRELAYQLAEQFRALGS LNLRCSV+VGGM+MLNQTQSLL
Sbjct: 121 PILQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLL 180

Query: 181 KRPHIVVATPGRVKVLLEENPDIPLIFSRTKFLILDEADRVLDVGFEEELKVIFQCLPRN 240
           KRPHIV+ATPGRVKVLLEENPDIP +FS+TKFL+LDEADRVLDVGFEEELKVIF+CLPRN
Sbjct: 181 KRPHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRN 240

Query: 241 RQTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIL 300
           RQTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHI+
Sbjct: 241 RQTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIM 300

Query: 301 SKMEDMGIRSAIIFTQTCKICHHLGLLLEELDQEMVALHSFKSQAERLSALYRFKSGRVP 360
           SKM+DMG+RSAIIF  TCK CHHLGLLL ELDQ++VALHSFKSQ+ERL+ALYRFKSG+ P
Sbjct: 301 SKMKDMGVRSAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSGQAP 360

Query: 361 VLLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDVELI 420
           VLLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGR GLAVSFITQNDVELI
Sbjct: 361 VLLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRHGLAVSFITQNDVELI 420

Query: 421 HEIEANLGKQLESFECKEDEVLENITKVYKARRVAAMKMVDDGFEEKVKERKEQKLKTLS 480
           HEIEANLGK+LE FECKE+EVLEN+TKVYKARRVAAMKMVDDGFEEKVKERK+QK K L+
Sbjct: 421 HEIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKILA 480

Query: 481 EKGLLKKKNSRKRRREKTSK 500
           EKGLLKK+ SRKRRREK SK
Sbjct: 481 EKGLLKKR-SRKRRREKASK 497

[Close]

BLAST of Sed0019877 vs. NCBI nr
Match: XP_038900331.1 (DEAD-box ATP-dependent RNA helicase 36 [Benincasa hispida])

HSP 1 Score: 851.7 bits (2199), Expect = 3.3e-243
Identity = 439/499 (87.98%), Postives = 475/499 (95.19%), Query Frame = 0


Query: 1   MDQEVTVDENFPLFSKSHRKNNKPSPKPTGAAVSTAVDTIVANKTPIQIEKHTELTSEST 60
           MD+EV +DENFPLFSKSHRK +KPS  PTGA +S AV+   A K  +QIEK TEL+++ST
Sbjct: 1   MDREVIIDENFPLFSKSHRKKHKPSENPTGAPISPAVEN-NAPKKSLQIEKSTELSTKST 60

Query: 61  DDVTFADLGLSEWIVETCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALP 120
           ++VTFADLGLSEWIV+TCKEL MKKPTAVQTHCIPKILAGLDVLG+AQTGSGKTAAFALP
Sbjct: 61  NNVTFADLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALP 120

Query: 121 ILQRLSETPFGVFALVITPTRELAYQLAEQFRALGSCLNLRCSVIVGGMNMLNQTQSLLK 180
           ILQRLSETPFGVFALV+TPTRELAYQLAEQFRALGSCLNLRCSV+VGGM+ML+QTQSLLK
Sbjct: 121 ILQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLSQTQSLLK 180

Query: 181 RPHIVVATPGRVKVLLEENPDIPLIFSRTKFLILDEADRVLDVGFEEELKVIFQCLPRNR 240
           RPHIV+ATPGRVKVLLEENPDIP++FS+TKFL+LDEADRVLDVGFEEELKVIFQCLP +R
Sbjct: 181 RPHIVIATPGRVKVLLEENPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPHSR 240

Query: 241 QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHILS 300
           QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPK+VKD+YLLHILS
Sbjct: 241 QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHILS 300

Query: 301 KMEDMGIRSAIIFTQTCKICHHLGLLLEELDQEMVALHSFKSQAERLSALYRFKSGRVPV 360
           KMEDMGIRSAIIF QTCK CH LGLLLE LDQE+ ALHSFKSQ+ERL+ALYRFKSG+VPV
Sbjct: 301 KMEDMGIRSAIIFVQTCKSCHMLGLLLEALDQEVAALHSFKSQSERLAALYRFKSGQVPV 360

Query: 361 LLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDVELIH 420
           LLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDV+LIH
Sbjct: 361 LLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDVQLIH 420

Query: 421 EIEANLGKQLESFECKEDEVLENITKVYKARRVAAMKMVDDGFEEKVKERKEQKLKTLSE 480
           EIEANLGKQLE+FECKE+EVLENITKVYKAR VA MKMVDDGFEEKVKERK+QKLKTL+E
Sbjct: 421 EIEANLGKQLENFECKENEVLENITKVYKARHVAKMKMVDDGFEEKVKERKKQKLKTLAE 480

Query: 481 KGLLKKKNSRKRRREKTSK 500
           KGLLKK+N RK R+EKTSK
Sbjct: 481 KGLLKKRNKRK-RKEKTSK 497

[Close]

BLAST of Sed0019877 vs. NCBI nr
Match: XP_023534745.1 (DEAD-box ATP-dependent RNA helicase 36 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 848.6 bits (2191), Expect = 2.8e-242
Identity = 443/499 (88.78%), Postives = 470/499 (94.19%), Query Frame = 0


Query: 1   MDQEVTVDENFPLFSKSHRKNNKPSPKPTGAAVSTAVDTIVANKTPIQIEKHTELTSEST 60
           MDQEVTVDENFPLFSKSHRK +KPS K   AAV        A K PIQ+EK TELT++ST
Sbjct: 1   MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAVDN-----TAEKAPIQVEKSTELTTKST 60

Query: 61  DDVTFADLGLSEWIVETCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALP 120
            +VTFADLGLSEWIV+TCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALP
Sbjct: 61  -NVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALP 120

Query: 121 ILQRLSETPFGVFALVITPTRELAYQLAEQFRALGSCLNLRCSVIVGGMNMLNQTQSLLK 180
           ILQ+LSETPFGVFALV+TPTRELAYQLAEQFRALGS LNLRCSV+VGGM+MLNQTQSLLK
Sbjct: 121 ILQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLK 180

Query: 181 RPHIVVATPGRVKVLLEENPDIPLIFSRTKFLILDEADRVLDVGFEEELKVIFQCLPRNR 240
           RPHIV+ATPGRVKVLLEENPDIP +FS+TKFL+LDEADRVLDVGFEEELKVIF+CLPRNR
Sbjct: 181 RPHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNR 240

Query: 241 QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHILS 300
           QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHI+S
Sbjct: 241 QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMS 300

Query: 301 KMEDMGIRSAIIFTQTCKICHHLGLLLEELDQEMVALHSFKSQAERLSALYRFKSGRVPV 360
           KM+DMGIRSAIIF  TCK CHHLGLLLEELDQ++ ALHSFKSQ+ERLSALYRFKSG+ PV
Sbjct: 301 KMKDMGIRSAIIFVHTCKSCHHLGLLLEELDQDVAALHSFKSQSERLSALYRFKSGQAPV 360

Query: 361 LLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDVELIH 420
           LLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGR GLAVSFITQNDVELIH
Sbjct: 361 LLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRHGLAVSFITQNDVELIH 420

Query: 421 EIEANLGKQLESFECKEDEVLENITKVYKARRVAAMKMVDDGFEEKVKERKEQKLKTLSE 480
           EIEANLGK+LE FECKE+EVLEN+TKVYKARRVAAMKMVDDGFEEKVKERK+QK KTL+E
Sbjct: 421 EIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKTLAE 480

Query: 481 KGLLKKKNSRKRRREKTSK 500
           KGLLKK+ SRKRRREK SK
Sbjct: 481 KGLLKKR-SRKRRREKASK 492

[Close]

BLAST of Sed0019877 vs. ExPASy Swiss-Prot
Match: Q9SA27 (DEAD-box ATP-dependent RNA helicase 36 OS=Arabidopsis thaliana OX=3702 GN=RH36 PE=2 SV=1)

HSP 1 Score: 624.8 bits (1610), Expect = 8.6e-178
Identity = 327/497 (65.79%), Postives = 399/497 (80.28%), Query Frame = 0


Query: 3   QEVTVDE--NFPLFSKSHRKNNKPSPKPTGAAVSTAVDTIVANKTPIQIEKHT--ELTSE 62
           +E T +E     + SKS RKN K         V+     + +++   Q EK T    +S+
Sbjct: 2   EEPTPEEEGGITIMSKS-RKNPK-------TVVNIQSQKLDSDQNTPQFEKFTNPNPSSD 61

Query: 63  STDDVTFADLGLSEWIVETCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFA 122
           +T    F  LGL+EW VETCKEL M+KPT VQTHC+PKILAG DVLGLAQTGSGKTAAFA
Sbjct: 62  TTSATNFEGLGLAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFA 121

Query: 123 LPILQRLSETPFGVFALVITPTRELAYQLAEQFRALGSCLNLRCSVIVGGMNMLNQTQSL 182
           LPIL RL+E P+GVFALV+TPTRELA+QLAEQF+ALGSCLNLRCSVIVGGM+ML QT SL
Sbjct: 122 LPILHRLAEDPYGVFALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSL 181

Query: 183 LKRPHIVVATPGRVKVLLEENPDIPLIFSRTKFLILDEADRVLDVGFEEELKVIFQCLPR 242
           + RPHIV+ TPGR+KVLLE NPD+P +FSRTKFL+LDEADRVLDVGF++EL+ IFQCLP+
Sbjct: 182 VSRPHIVITTPGRIKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCLPK 241

Query: 243 NRQTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHI 302
           +RQTLLFSATMT +L+ LLE S+NKAYFYEAYEG KTVD L QQ++F  K+ K++YL+HI
Sbjct: 242 SRQTLLFSATMTSNLQALLEHSSNKAYFYEAYEGLKTVDTLTQQFIFEDKDAKELYLVHI 301

Query: 303 LSKMEDMGIRSAIIFTQTCKICHHLGLLLEELDQEMVALHSFKSQAERLSALYRFKSGRV 362
           LS+MED GIRSA+IF  TC+ C  L L+L+EL+ E +A+HS  SQ+ RLSAL +FKSG+V
Sbjct: 302 LSQMEDKGIRSAMIFVSTCRTCQRLSLMLDELEVENIAMHSLNSQSMRLSALSKFKSGKV 361

Query: 363 PVLLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDVEL 422
           P+LLATDVASRGLDIPTVDLVINYDIPR PRDYVHRVGRTARAGRGGLAVS IT+ DV+L
Sbjct: 362 PILLATDVASRGLDIPTVDLVINYDIPRDPRDYVHRVGRTARAGRGGLAVSIITETDVKL 421

Query: 423 IHEIEANLGKQLESFECKEDEVLENITKVYKARRVAAMKMVDDGFEEKVKERKEQKLKTL 482
           IH+IE  +GK++E +  K       +TKV KA+RVA MKM+D+GFE+KVK+R++ K KTL
Sbjct: 422 IHKIEEEVGKKMEPYNKKVITDSLEVTKVSKAKRVAMMKMLDNGFEDKVKDRRKLKRKTL 481

Query: 483 SEKGLLKKKNSRKRRRE 496
           ++KGLLKK+  R++  E
Sbjct: 482 ADKGLLKKRGKRQKSTE 490

[Close]

BLAST of Sed0019877 vs. ExPASy Swiss-Prot
Match: Q8L4E9 (DEAD-box ATP-dependent RNA helicase 36 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0633500 PE=3 SV=1)

HSP 1 Score: 517.7 bits (1332), Expect = 1.5e-145
Identity = 268/474 (56.54%), Postives = 349/474 (73.63%), Query Frame = 0


Query: 24  PSPKPTGAAVSTAVDTIVANKTPIQIEKHTELTSESTDDVTFADLGLSEWIVETCKELAM 83
           P+P P+ A      D+  A    +      +  + +    TFA+LGLS+W+V+ C  L M
Sbjct: 39  PNPSPSPAIEPDLRDSDEAPAAAVTEHAGDDAAAAAVPS-TFAELGLSQWLVDVCDSLGM 98

Query: 84  KKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQRLSETPFGVFALVITPTREL 143
           + PTAVQ  CIP+ L G DVLG+A+TGSGKTAAFALPIL RL E P+GV AL + PTREL
Sbjct: 99  RVPTAVQRRCIPRALEGRDVLGIAETGSGKTAAFALPILHRLGEDPYGVAALALAPTREL 158

Query: 144 AYQLAEQFRALGSCLNLRCSVIVGGMNMLNQTQSLLKRPHIVVATPGRVKVLLEENPDIP 203
           A QLAEQFRALG+ L LRC   +GG + L Q + L +RPH+VVATPGR+  L+ ++PD+ 
Sbjct: 159 AAQLAEQFRALGAPLGLRCLAAIGGFDSLGQAKGLARRPHVVVATPGRIATLINDDPDLA 218

Query: 204 LIFSRTKFLILDEADRVLDVGFEEELKVIFQCLPRNRQTLLFSATMTKDLETLLELSANK 263
            +F+RTKFL+LDEADRVLD+ FEE+L+VIF  LP+ RQT LFSAT++ +L +LLELS N 
Sbjct: 219 KVFARTKFLVLDEADRVLDINFEEDLRVIFGSLPKKRQTFLFSATISDNLRSLLELSGNN 278

Query: 264 AYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHILSKMEDMGIRSAIIFTQTCKICHHL 323
           +YF+EAYEGFKTVD LKQ Y+ +P + K++YL ++LSKM +  IRS I+F  TC+ C +L
Sbjct: 279 SYFFEAYEGFKTVDTLKQLYIHVPPDAKELYLFYLLSKMNEDNIRSVIVFVSTCRTCQYL 338

Query: 324 GLLLEELDQEMVALHSFKSQAERLSALYRFKSGRVPVLLATDVASRGLDIPTVDLVINYD 383
             LLEEL    V+LHS K Q+ RL+AL+ FKS +VPVLLATDVASRGLDI TVDLVINYD
Sbjct: 339 DFLLEELGHPAVSLHSHKPQSRRLAALHNFKSSKVPVLLATDVASRGLDIQTVDLVINYD 398

Query: 384 IPRFPRDYVHRVGRTARAGRGGLAVSFI-TQNDVELIHEIEANLGKQLESFECKEDEVLE 443
           +PR+PRDY+HRVGRTARA RGGL++SFI TQ D+ L+HEIE  +GKQL +++ +  +V +
Sbjct: 399 VPRYPRDYIHRVGRTARATRGGLSISFITTQRDIRLLHEIEDVVGKQLGAYDGEMRDVNK 458

Query: 444 NITKVYKARRVAAMKMVDDGFEEKVKERKEQKLKTLSEKGLLKKKNSRKRRREK 497
           + TKV+KARR+A MKM D+G E+KV+ RKEQK          K+   RKR+ ++
Sbjct: 459 DATKVFKARRLANMKMADEGHEDKVQARKEQK----------KRAQERKRKHDE 501

[Close]

BLAST of Sed0019877 vs. ExPASy Swiss-Prot
Match: Q9Y6V7 (Probable ATP-dependent RNA helicase DDX49 OS=Homo sapiens OX=9606 GN=DDX49 PE=1 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 1.9e-108
Identity = 219/451 (48.56%), Postives = 300/451 (66.52%), Query Frame = 0


Query: 65  FADLGLSEWIVETCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQR 124
           FA+LGLS W+VE C++L +K+PT VQ  CIP IL G D LG A+TGSGKTAAF LPILQ+
Sbjct: 4   FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63

Query: 125 LSETPFGVFALVITPTRELAYQLAEQFRALGSCLNLRCSVIVGGMNMLNQTQSLLKRPHI 184
           LSE P+G+F LV+TPTRELAYQ+AEQFR LG  L L+  +IVGGM+M+ Q   L ++PH+
Sbjct: 64  LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHV 123

Query: 185 VVATPGRVKVLLEENPDIPLIFSRTKFLILDEADRVLDVG---FEEELKVIFQCLPRNRQ 244
           V+ATPGR+   L  +    +   + +FL++DEADR+L+ G   F  +L+ I   +P  RQ
Sbjct: 124 VIATPGRLADHLRSSNTFSI--KKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVPARRQ 183

Query: 245 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHILSK 304
           TLLFSAT+T  L  L  L+ N+ +F+EA     TV+ L Q+Y+ +P+ VKD YL+H++ +
Sbjct: 184 TLLFSATLTDTLRELQGLATNQPFFWEAQAPVSTVEQLDQRYLLVPEKVKDAYLVHLIQR 243

Query: 305 MEDMGIR-SAIIFTQTCKICHHLGLLLEELDQEMVALHSFKSQAERLSALYRFKSGRVPV 364
            +D     S IIFT TCK C  L ++L +     VALHS   Q ER +AL +FKS    +
Sbjct: 244 FQDEHEDWSIIIFTNTCKTCQILCMMLRKFSFPTVALHSMMKQKERFAALAKFKSSIYRI 303

Query: 365 LLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDVELIH 424
           L+ATDVASRGLDIPTV +VIN++ P  P+ Y+HRVGRTARAGR G A++ +TQ D+ L+H
Sbjct: 304 LIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDIHLVH 363

Query: 425 EIEANLGKQLESFECKEDEVLENITKVYKARRVAAMKMVDDGFEEKVKERKEQKL----- 484
            IE  + K+LE F  +E EVL+ +T+V   RR   +K+    F+EK +  K ++L     
Sbjct: 364 AIEEQIKKKLEEFSVEEAEVLQILTQVNVVRRECEIKLEAAHFDEKKEINKRKQLILEGK 423

Query: 485 ------KTLSEKGLLKKKNSR-KRRREKTSK 500
                 K  +E   +K+KN R K + E+T K
Sbjct: 424 DPDLEAKRKAELAKIKQKNRRFKEKVEETLK 452

[Close]

BLAST of Sed0019877 vs. ExPASy Swiss-Prot
Match: Q4FZF3 (Probable ATP-dependent RNA helicase DDX49 OS=Mus musculus OX=10090 GN=Ddx49 PE=2 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 6.1e-107
Identity = 213/450 (47.33%), Postives = 298/450 (66.22%), Query Frame = 0


Query: 65  FADLGLSEWIVETCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQR 124
           FA++GLS W+VE C++L +K+PT VQ  CIP IL G D LG A+TGSGKTAAF LPILQ+
Sbjct: 4   FAEIGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63

Query: 125 LSETPFGVFALVITPTRELAYQLAEQFRALGSCLNLRCSVIVGGMNMLNQTQSLLKRPHI 184
           LSE P+G+F LV+TPTRELAYQ+AEQFR LG  L L+  +IVGGM+M+ Q   L ++PH+
Sbjct: 64  LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHV 123

Query: 185 VVATPGRVKVLLEENPDIPLIFSRTKFLILDEADRVLDVG---FEEELKVIFQCLPRNRQ 244
           V+ATPGR+   L  +    +   + +FL++DEADR+L+ G   F  +L+ I   +P  RQ
Sbjct: 124 VIATPGRLADHLRSSNTFNM--KKIQFLVMDEADRLLEQGCTDFTTDLETILAAVPARRQ 183

Query: 245 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHILSK 304
           TLLFSAT+T  L+ L  L+ N+ +F+EA    +TV+ L Q+Y+ +P+ VKD YL+H++  
Sbjct: 184 TLLFSATLTDTLKELQGLATNEPFFWEAQATVRTVEQLDQRYLLVPEKVKDAYLVHLVQT 243

Query: 305 MED-MGIRSAIIFTQTCKICHHLGLLLEELDQEMVALHSFKSQAERLSALYRFKSGRVPV 364
            +D +   S IIFT TCK C  L ++L + +   VALHS   Q ER +AL +FKS    +
Sbjct: 244 FQDQLEDCSIIIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAALAKFKSSIYRI 303

Query: 365 LLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDVELIH 424
           L+ATDVASRGLDIPTV +VIN++ P  P+ Y+HRVGRTARAGR G A++ +TQ D+ L+H
Sbjct: 304 LIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDIHLLH 363

Query: 425 EIEANLGKQLESFECKEDEVLENITKVYKARRVAAMKMVDDGFEEK---------VKERK 484
            IE  + +QL     +E EVL+ +T+V   RR   +K+    F+EK         + E K
Sbjct: 364 AIEEQIKQQLAELVVEEAEVLQILTQVNVVRRECEIKLEASHFDEKKEINKRKQMILEGK 423

Query: 485 EQKLKTLSEKGLLKKKNSRKRRREKTSKAV 502
           +  L+   +  L K K   +R +EK  + +
Sbjct: 424 DPDLEAKRKAELAKIKQQNRRFKEKVGQTL 451

[Close]

BLAST of Sed0019877 vs. ExPASy Swiss-Prot
Match: Q55BR9 (Probable ATP-dependent RNA helicase ddx49 OS=Dictyostelium discoideum OX=44689 GN=ddx49 PE=3 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 1.1e-103
Identity = 212/444 (47.75%), Postives = 292/444 (65.77%), Query Frame = 0


Query: 62  DVTFADLGLSEWIVETCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPI 121
           D TF +LGL+ W+V  CK+L  K P+ +Q + IP+IL G D++  A+TGSGKTA+FA+PI
Sbjct: 3   DKTFEELGLTTWLVANCKQLGFKAPSNIQANTIPEILKGRDIIASAKTGSGKTASFAIPI 62

Query: 122 LQRLSETPFGVFALVITPTRELAYQLAEQFRALGSCLNLRCSVIVGGMNMLNQTQSLLKR 181
           L +LSE P+GVFA+++TPTRELA Q+ EQF A+G+ +N+ CSV++GG++ + Q   L KR
Sbjct: 63  LNQLSEDPYGVFAVILTPTRELAVQIGEQFNAIGAPMNVNCSVVIGGIDNVTQALILDKR 122

Query: 182 PHIVVATPGRVKVLLEENPDIPLIFSRTKFLILDEADRVLDVGFEEELKVIFQCL--PRN 241
           PHI+VATPGR+   L     I L F   KFL+LDEADR+L   FE E+  I + L  P  
Sbjct: 123 PHIIVATPGRLASHLNNGLKIALKF--CKFLVLDEADRLLGEDFELEIASILEHLPPPEK 182

Query: 242 RQTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIL 301
           RQTLLFSATMTK+L  L  ++ NK + +E    + TVD LKQ+Y+++P   KD YL++IL
Sbjct: 183 RQTLLFSATMTKNLTKLDSIALNKPFIFEDNSKYDTVDTLKQEYIYMPAPTKDCYLVYIL 242

Query: 302 SKMEDMGIRSAIIFTQTCKICHHLGLLLEELDQEMVALHSFKSQAERLSALYRFKSGRVP 361
            K E     SAI+F   C     +  +L +LD   V+LHSF  Q  RL+AL  FKSG+V 
Sbjct: 243 KKHEG---SSAIVFVNNCYAVEAVKGMLNKLDIPSVSLHSFLDQKSRLAALKTFKSGKVK 302

Query: 362 VLLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDVELI 421
           VL+ATDVASRGLDIP V +VINY +    +DY+HRVGRTAR GR G A+SFIT +DV LI
Sbjct: 303 VLVATDVASRGLDIPDVQIVINYKLSNSSKDYIHRVGRTARFGRSGRAISFITPHDVSLI 362

Query: 422 HEIEANLGKQLESFECKEDEVLENITKVYKARRVAAMKMVDDGFEEKVKERK------EQ 481
             IE  + KQLE ++  +DEV  ++ +   AR++  + + +  F  K KER+      ++
Sbjct: 363 KGIEEIIKKQLELYKTDDDEVFRHLKEASTARKIVEIHLDEIEFGVKQKERRTERNELQK 422

Query: 482 KLKTLSEKGLLKKKNSRKRRREKT 498
           +LK ++ K   +  N+      KT
Sbjct: 423 QLKEVNNKEKFENNNNDNNNNNKT 441

[Close]

BLAST of Sed0019877 vs. ExPASy TrEMBL
Match: A0A6J1D9D5 (DEAD-box ATP-dependent RNA helicase 36 OS=Momordica charantia OX=3673 GN=LOC111018118 PE=3 SV=1)

HSP 1 Score: 858.6 bits (2217), Expect = 1.3e-245
Identity = 442/499 (88.58%), Postives = 476/499 (95.39%), Query Frame = 0


Query: 1   MDQEVTVDENFPLFSKSHRKNNKPSPKPTGAAVSTAVDTIVANKTPIQIEKHTELTSEST 60
           MD+EVTVDENFPLF+KSHRK +KPS  PTG  VST V+TI A+K P+Q+EK T+L + ST
Sbjct: 1   MDEEVTVDENFPLFAKSHRKKHKPSQNPTGGPVSTIVETI-ASKKPLQVEKSTDLATTST 60

Query: 61  DDVTFADLGLSEWIVETCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALP 120
           ++VTFADLGLSEWIV TCKELAM+KPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALP
Sbjct: 61  NNVTFADLGLSEWIVRTCKELAMRKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALP 120

Query: 121 ILQRLSETPFGVFALVITPTRELAYQLAEQFRALGSCLNLRCSVIVGGMNMLNQTQSLLK 180
           ILQRLSETPFGVFALV+TPTRELAYQLAEQFRALGS L+LRCSV+VGGM+MLNQ QSLLK
Sbjct: 121 ILQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLHLRCSVVVGGMDMLNQAQSLLK 180

Query: 181 RPHIVVATPGRVKVLLEENPDIPLIFSRTKFLILDEADRVLDVGFEEELKVIFQCLPRNR 240
           RPHIV+ATPGRVKVLLEENPDIPL+FS+TKFL+LDEADRVLDVGFEEELKVIFQCLPRNR
Sbjct: 181 RPHIVIATPGRVKVLLEENPDIPLVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNR 240

Query: 241 QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHILS 300
           QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTV+MLKQQYVFIPKNVKDVYLLHILS
Sbjct: 241 QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVEMLKQQYVFIPKNVKDVYLLHILS 300

Query: 301 KMEDMGIRSAIIFTQTCKICHHLGLLLEELDQEMVALHSFKSQAERLSALYRFKSGRVPV 360
           KMEDMGIRSAIIF QTC+ CH LGLLLEELDQE+ ALHSFKSQ++RL+ALYRFKSG+VPV
Sbjct: 301 KMEDMGIRSAIIFVQTCRSCHLLGLLLEELDQEVAALHSFKSQSQRLAALYRFKSGQVPV 360

Query: 361 LLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDVELIH 420
           LLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDVELIH
Sbjct: 361 LLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDVELIH 420

Query: 421 EIEANLGKQLESFECKEDEVLENITKVYKARRVAAMKMVDDGFEEKVKERKEQKLKTLSE 480
           EIEA +GKQLE+FECKE+EVLENITKVYKARRVAAMKMVDDGFEEKVKERK+QK KTL+E
Sbjct: 421 EIEAVVGKQLENFECKENEVLENITKVYKARRVAAMKMVDDGFEEKVKERKKQKQKTLAE 480

Query: 481 KGLLKKKNSRKRRREKTSK 500
           KGLLKKK   K+RREKTS+
Sbjct: 481 KGLLKKKKRSKKRREKTSE 498

[Close]

BLAST of Sed0019877 vs. ExPASy TrEMBL
Match: A0A6J1G6B4 (DEAD-box ATP-dependent RNA helicase 36 OS=Cucurbita moschata OX=3662 GN=LOC111451228 PE=3 SV=1)

HSP 1 Score: 854.0 bits (2205), Expect = 3.2e-244
Identity = 447/500 (89.40%), Postives = 475/500 (95.00%), Query Frame = 0


Query: 1   MDQEVTVDENFPLFSKSHRKNNKPSPK-PTGAAVSTAVDTIVANKTPIQIEKHTELTSES 60
           MDQEVTVDENFPLFSKSHRK +KPS K PT AAVS AVD   A K PIQIEK TELT++S
Sbjct: 1   MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAAVSAAVDN-TAEKAPIQIEKSTELTTKS 60

Query: 61  TDDVTFADLGLSEWIVETCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFAL 120
           T +VTFADLGLSEWIV+TCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFAL
Sbjct: 61  T-NVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFAL 120

Query: 121 PILQRLSETPFGVFALVITPTRELAYQLAEQFRALGSCLNLRCSVIVGGMNMLNQTQSLL 180
           PILQ+LSETPFGVFALV+TPTRELAYQLAEQFRALGS LNLRCSV+VGGM+MLNQTQSLL
Sbjct: 121 PILQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLL 180

Query: 181 KRPHIVVATPGRVKVLLEENPDIPLIFSRTKFLILDEADRVLDVGFEEELKVIFQCLPRN 240
           KRPHIV+ATPGRVKVLLEENPDIP +FS+TKFL+LDEADRVLDVGFEEELKVIF+CLPRN
Sbjct: 181 KRPHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRN 240

Query: 241 RQTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIL 300
           RQTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHI+
Sbjct: 241 RQTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIM 300

Query: 301 SKMEDMGIRSAIIFTQTCKICHHLGLLLEELDQEMVALHSFKSQAERLSALYRFKSGRVP 360
           SKM+DMG+RSAIIF  TCK CHHLGLLL ELDQ++VALHSFKSQ+ERL+ALYRFKSG+ P
Sbjct: 301 SKMKDMGVRSAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSGQAP 360

Query: 361 VLLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDVELI 420
           VLLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGR GLAVSFITQNDVELI
Sbjct: 361 VLLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRHGLAVSFITQNDVELI 420

Query: 421 HEIEANLGKQLESFECKEDEVLENITKVYKARRVAAMKMVDDGFEEKVKERKEQKLKTLS 480
           HEIEANLGK+LE FECKE+EVLEN+TKVYKARRVAAMKMVDDGFEEKVKERK+QK K L+
Sbjct: 421 HEIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKILA 480

Query: 481 EKGLLKKKNSRKRRREKTSK 500
           EKGLLKK+ SRKRRREK SK
Sbjct: 481 EKGLLKKR-SRKRRREKASK 497

[Close]

BLAST of Sed0019877 vs. ExPASy TrEMBL
Match: A0A6J1L281 (DEAD-box ATP-dependent RNA helicase 36 OS=Cucurbita maxima OX=3661 GN=LOC111499736 PE=3 SV=1)

HSP 1 Score: 843.2 bits (2177), Expect = 5.7e-241
Identity = 441/499 (88.38%), Postives = 471/499 (94.39%), Query Frame = 0


Query: 1   MDQEVTVDENFPLFSKSHRKNNKPSPKPTGAAVSTAVDTIVANKTPIQIEKHTELTSEST 60
           MDQEVTVDENFPLFSKSHRK +KPS K       TAVD   A K PIQIEK TELT++ST
Sbjct: 1   MDQEVTVDENFPLFSKSHRKTHKPSLKN-----PTAVDN-TAQKAPIQIEKSTELTTKST 60

Query: 61  DDVTFADLGLSEWIVETCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALP 120
            +VTFADLGLSEWIV+TCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALP
Sbjct: 61  -NVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALP 120

Query: 121 ILQRLSETPFGVFALVITPTRELAYQLAEQFRALGSCLNLRCSVIVGGMNMLNQTQSLLK 180
           ILQ+LSETPFGVFALV+TPTRELAYQLAEQFRALGS LNLRCSV+VGGM+MLNQTQSLLK
Sbjct: 121 ILQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLK 180

Query: 181 RPHIVVATPGRVKVLLEENPDIPLIFSRTKFLILDEADRVLDVGFEEELKVIFQCLPRNR 240
           RPHIV+ATPGRVKVLLEENPDIP +FS+TKFL+LDEADRVLDVGFEEELKVIF+CLPRNR
Sbjct: 181 RPHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNR 240

Query: 241 QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHILS 300
           QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQY+F+PKNVKDVYLLHI+S
Sbjct: 241 QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYIFLPKNVKDVYLLHIMS 300

Query: 301 KMEDMGIRSAIIFTQTCKICHHLGLLLEELDQEMVALHSFKSQAERLSALYRFKSGRVPV 360
           KM+DMG+RSAIIF  TCK CHHLGLLLEELDQ++ ALHSFKSQ+ERL+ALYRFKSG+ PV
Sbjct: 301 KMKDMGVRSAIIFVHTCKSCHHLGLLLEELDQDVAALHSFKSQSERLAALYRFKSGQAPV 360

Query: 361 LLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDVELIH 420
           LLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGR GLAVSFITQNDVELIH
Sbjct: 361 LLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRHGLAVSFITQNDVELIH 420

Query: 421 EIEANLGKQLESFECKEDEVLENITKVYKARRVAAMKMVDDGFEEKVKERKEQKLKTLSE 480
           EIEANLGK+LE FECKE+EVLEN+TKVYKARRVAAMKMVDDGFEEKVKERK+QK KTL+E
Sbjct: 421 EIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKTLAE 480

Query: 481 KGLLKKKNSRKRRREKTSK 500
           KGLLKK+ SRKRRREK SK
Sbjct: 481 KGLLKKR-SRKRRREKGSK 491

[Close]

BLAST of Sed0019877 vs. ExPASy TrEMBL
Match: A0A5D3CBL8 (DEAD-box ATP-dependent RNA helicase 36 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3734G00060 PE=3 SV=1)

HSP 1 Score: 842.0 bits (2174), Expect = 1.3e-240
Identity = 435/497 (87.53%), Postives = 467/497 (93.96%), Query Frame = 0


Query: 1   MDQEVTVDENFPLFSKSHRKNNKPSPKPTGAAVSTAVDTIVANKTPIQIEKHTELTSEST 60
           MDQEV VD NFPLFSK HRK +KPS  PT A  +      +A K+ +QIEK TELT++ST
Sbjct: 1   MDQEVIVDANFPLFSKPHRKKHKPSENPTAAVEN------IAPKSSLQIEKSTELTTKST 60

Query: 61  DDVTFADLGLSEWIVETCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALP 120
           ++VTF+DLGLSEWIV+TCKEL MKKPTAVQTHCIPKILAGLDVLG+AQTGSGKTAAFALP
Sbjct: 61  NNVTFSDLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALP 120

Query: 121 ILQRLSETPFGVFALVITPTRELAYQLAEQFRALGSCLNLRCSVIVGGMNMLNQTQSLLK 180
           ILQRLSETPFGVFALV+TPTRELAYQLAEQFRALGSCLNLRCSV+VGGM+ML+QTQSLLK
Sbjct: 121 ILQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLSQTQSLLK 180

Query: 181 RPHIVVATPGRVKVLLEENPDIPLIFSRTKFLILDEADRVLDVGFEEELKVIFQCLPRNR 240
           RPHIV+ATPGRVKVLLEENPDIP++FS+TKFL+LDEADRVLDVGFEEELKVIFQCLPRNR
Sbjct: 181 RPHIVIATPGRVKVLLEENPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNR 240

Query: 241 QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHILS 300
           QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPK+VKD+YLLHILS
Sbjct: 241 QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHILS 300

Query: 301 KMEDMGIRSAIIFTQTCKICHHLGLLLEELDQEMVALHSFKSQAERLSALYRFKSGRVPV 360
           KMEDMGIRSAIIF QTCK CH LGLLLE LDQE+ ALHSFKSQ+ERL+ALYRFKSG+VPV
Sbjct: 301 KMEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSFKSQSERLAALYRFKSGQVPV 360

Query: 361 LLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDVELIH 420
           LLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDV LIH
Sbjct: 361 LLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDVHLIH 420

Query: 421 EIEANLGKQLESFECKEDEVLENITKVYKARRVAAMKMVDDGFEEKVKERKEQKLKTLSE 480
           EIEANLGKQLE FECKE+EVLENITKVYKAR VA MKMVDDGFEEKVKERK+QKLKTL+E
Sbjct: 421 EIEANLGKQLEIFECKENEVLENITKVYKARHVAKMKMVDDGFEEKVKERKKQKLKTLAE 480

Query: 481 KGLLKKKNSRKRRREKT 498
           KGLLKK+N R RR+EKT
Sbjct: 481 KGLLKKRNKR-RRKEKT 490

[Close]

BLAST of Sed0019877 vs. ExPASy TrEMBL
Match: A0A1S3C309 (DEAD-box ATP-dependent RNA helicase 36 OS=Cucumis melo OX=3656 GN=LOC103496288 PE=3 SV=1)

HSP 1 Score: 842.0 bits (2174), Expect = 1.3e-240
Identity = 435/497 (87.53%), Postives = 467/497 (93.96%), Query Frame = 0


Query: 1   MDQEVTVDENFPLFSKSHRKNNKPSPKPTGAAVSTAVDTIVANKTPIQIEKHTELTSEST 60
           MDQEV VD NFPLFSK HRK +KPS  PT A  +      +A K+ +QIEK TELT++ST
Sbjct: 1   MDQEVIVDANFPLFSKPHRKKHKPSENPTAAVEN------IAPKSSLQIEKSTELTTKST 60

Query: 61  DDVTFADLGLSEWIVETCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALP 120
           ++VTF+DLGLSEWIV+TCKEL MKKPTAVQTHCIPKILAGLDVLG+AQTGSGKTAAFALP
Sbjct: 61  NNVTFSDLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALP 120

Query: 121 ILQRLSETPFGVFALVITPTRELAYQLAEQFRALGSCLNLRCSVIVGGMNMLNQTQSLLK 180
           ILQRLSETPFGVFALV+TPTRELAYQLAEQFRALGSCLNLRCSV+VGGM+ML+QTQSLLK
Sbjct: 121 ILQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLSQTQSLLK 180

Query: 181 RPHIVVATPGRVKVLLEENPDIPLIFSRTKFLILDEADRVLDVGFEEELKVIFQCLPRNR 240
           RPHIV+ATPGRVKVLLEENPDIP++FS+TKFL+LDEADRVLDVGFEEELKVIFQCLPRNR
Sbjct: 181 RPHIVIATPGRVKVLLEENPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNR 240

Query: 241 QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHILS 300
           QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPK+VKD+YLLHILS
Sbjct: 241 QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHILS 300

Query: 301 KMEDMGIRSAIIFTQTCKICHHLGLLLEELDQEMVALHSFKSQAERLSALYRFKSGRVPV 360
           KMEDMGIRSAIIF QTCK CH LGLLLE LDQE+ ALHSFKSQ+ERL+ALYRFKSG+VPV
Sbjct: 301 KMEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSFKSQSERLAALYRFKSGQVPV 360

Query: 361 LLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDVELIH 420
           LLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDV LIH
Sbjct: 361 LLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDVHLIH 420

Query: 421 EIEANLGKQLESFECKEDEVLENITKVYKARRVAAMKMVDDGFEEKVKERKEQKLKTLSE 480
           EIEANLGKQLE FECKE+EVLENITKVYKAR VA MKMVDDGFEEKVKERK+QKLKTL+E
Sbjct: 421 EIEANLGKQLEIFECKENEVLENITKVYKARHVAKMKMVDDGFEEKVKERKKQKLKTLAE 480

Query: 481 KGLLKKKNSRKRRREKT 498
           KGLLKK+N R RR+EKT
Sbjct: 481 KGLLKKRNKR-RRKEKT 490

[Close]

BLAST of Sed0019877 vs. TAIR 10
Match: AT1G16280.1 (RNA helicase 36 )

HSP 1 Score: 624.8 bits (1610), Expect = 6.1e-179
Identity = 327/497 (65.79%), Postives = 399/497 (80.28%), Query Frame = 0


Query: 3   QEVTVDE--NFPLFSKSHRKNNKPSPKPTGAAVSTAVDTIVANKTPIQIEKHT--ELTSE 62
           +E T +E     + SKS RKN K         V+     + +++   Q EK T    +S+
Sbjct: 2   EEPTPEEEGGITIMSKS-RKNPK-------TVVNIQSQKLDSDQNTPQFEKFTNPNPSSD 61

Query: 63  STDDVTFADLGLSEWIVETCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFA 122
           +T    F  LGL+EW VETCKEL M+KPT VQTHC+PKILAG DVLGLAQTGSGKTAAFA
Sbjct: 62  TTSATNFEGLGLAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFA 121

Query: 123 LPILQRLSETPFGVFALVITPTRELAYQLAEQFRALGSCLNLRCSVIVGGMNMLNQTQSL 182
           LPIL RL+E P+GVFALV+TPTRELA+QLAEQF+ALGSCLNLRCSVIVGGM+ML QT SL
Sbjct: 122 LPILHRLAEDPYGVFALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSL 181

Query: 183 LKRPHIVVATPGRVKVLLEENPDIPLIFSRTKFLILDEADRVLDVGFEEELKVIFQCLPR 242
           + RPHIV+ TPGR+KVLLE NPD+P +FSRTKFL+LDEADRVLDVGF++EL+ IFQCLP+
Sbjct: 182 VSRPHIVITTPGRIKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCLPK 241

Query: 243 NRQTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHI 302
           +RQTLLFSATMT +L+ LLE S+NKAYFYEAYEG KTVD L QQ++F  K+ K++YL+HI
Sbjct: 242 SRQTLLFSATMTSNLQALLEHSSNKAYFYEAYEGLKTVDTLTQQFIFEDKDAKELYLVHI 301

Query: 303 LSKMEDMGIRSAIIFTQTCKICHHLGLLLEELDQEMVALHSFKSQAERLSALYRFKSGRV 362
           LS+MED GIRSA+IF  TC+ C  L L+L+EL+ E +A+HS  SQ+ RLSAL +FKSG+V
Sbjct: 302 LSQMEDKGIRSAMIFVSTCRTCQRLSLMLDELEVENIAMHSLNSQSMRLSALSKFKSGKV 361

Query: 363 PVLLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDVEL 422
           P+LLATDVASRGLDIPTVDLVINYDIPR PRDYVHRVGRTARAGRGGLAVS IT+ DV+L
Sbjct: 362 PILLATDVASRGLDIPTVDLVINYDIPRDPRDYVHRVGRTARAGRGGLAVSIITETDVKL 421

Query: 423 IHEIEANLGKQLESFECKEDEVLENITKVYKARRVAAMKMVDDGFEEKVKERKEQKLKTL 482
           IH+IE  +GK++E +  K       +TKV KA+RVA MKM+D+GFE+KVK+R++ K KTL
Sbjct: 422 IHKIEEEVGKKMEPYNKKVITDSLEVTKVSKAKRVAMMKMLDNGFEDKVKDRRKLKRKTL 481

Query: 483 SEKGLLKKKNSRKRRRE 496
           ++KGLLKK+  R++  E
Sbjct: 482 ADKGLLKKRGKRQKSTE 490

[Close]

BLAST of Sed0019877 vs. TAIR 10
Match: AT5G60990.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 343.6 bits (880), Expect = 2.7e-94
Identity = 197/449 (43.88%), Postives = 285/449 (63.47%), Query Frame = 0


Query: 64  TFADLGLSEWIVETCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQ 123
           TFA+LG+ E +V+ C+ L  K P+ +Q   +P  L G DV+GLAQTGSGKT AFA+PILQ
Sbjct: 10  TFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPILQ 69

Query: 124 RLSETPF------------GVFALVITPTRELAYQLAEQFRALGSCLNLRCSVIVGGMNM 183
            L E  +              FA V++PTRELA Q+AEQF ALG+ ++LRC+V+VGG++ 
Sbjct: 70  ALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGIDR 129

Query: 184 LNQTQSLLKRPHIVVATPGRVKVLLEENPDIPLIFSRTKFLILDEADRVLDVGFEEELKV 243
           + QT +L KRPH++VATPGR+   + +     L     K+L+LDEADR+L+  FE+ L  
Sbjct: 130 MQQTIALGKRPHVIVATPGRLWDHMSDTKGFSL--KSLKYLVLDEADRLLNEDFEKSLNQ 189

Query: 244 IFQCLPRNRQTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVK 303
           I + +P  R+T LFSATMTK +  L           EA   + TVD LKQQY F+    K
Sbjct: 190 ILEEIPLERKTFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQYRFVAAKYK 249

Query: 304 DVYLLHILSKMEDMGIRSAIIFTQTCKICHHLGLLLEELDQEMVALHSFKSQAERLSALY 363
           D YL++ILS+M +    +++IFT+TC     L L+L  L    + +    +Q++RL AL 
Sbjct: 250 DCYLVYILSEMPE---STSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGALN 309

Query: 364 RFKSGRVPVLLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFI 423
           +FK+G   +L+ TDVASRGLDIP+VD+VINYDIP   +DY+HRVGRTARAGR G+ +S +
Sbjct: 310 KFKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISLV 369

Query: 424 TQNDVELIHEIEANLGKQLESFECKEDEVLENITKVYKARRVAAMKMVDDGFEEKVKERK 483
            Q ++E   +IE  +GK+L  +  +EDEVL  + +V +A++++AM M + G  ++  E  
Sbjct: 370 NQYELEWYIQIEKLIGKKLPEYPAEEDEVLSLLERVAEAKKLSAMNMKESGGRKRRGEDD 429

Query: 484 EQKLKTLSEKGLLKKKNSRKRRREKTSKA 501
           E+  + L   G  K + +++R   K  K+
Sbjct: 430 EESERFL---GGNKDRGNKERGGNKDKKS 450

[Close]

BLAST of Sed0019877 vs. TAIR 10
Match: AT4G16630.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 246.1 bits (627), Expect = 5.9e-65
Identity = 165/435 (37.93%), Postives = 236/435 (54.25%), Query Frame = 0


Query: 64  TFADLGLSEWIVETCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQ 123
           TF +L LS  ++  C+ L  KKPT +Q  CIP  L G D+   A TGSGKTAAFALP L+
Sbjct: 168 TFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLE 227

Query: 124 RLSETPFGVFA---LVITPTRELAYQLAEQFRALGSCLNLRCSVIVGGMNMLNQTQSLLK 183
           RL   P  VFA   L++TPTRELA Q+    + L    +++C +IVGG+++  Q   L  
Sbjct: 228 RLLFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVLRS 287

Query: 184 RPHIVVATPGRVKVLLEENPDIPLIFSRTKFLILDEADRVLDVGFEEELKVIFQCLPRNR 243
            P IVVATPGR+   L  +  + L       LILDEADR+L  GF  E+  + +  P+ R
Sbjct: 288 MPDIVVATPGRMIDHLRNSMSVDL--DDLAVLILDEADRLLQTGFATEITELVRLCPKRR 347

Query: 244 QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHILS 303
           QT+LFSATMT++++ L++LS NK     A    +    L ++ V I +  +      +LS
Sbjct: 348 QTMLFSATMTEEVKELVKLSLNKPLRLSADPSARRPPGLTEEVVRIRRTREANQEAVLLS 407

Query: 304 KMEDMGIRSAIIFTQTCKICHHLGLLLEELDQEMVALHSFKSQAERLSALYRFKSGRVPV 363
                     IIF+ T +  H L +L      +   LH   +QA+RL +L  F+   V  
Sbjct: 408 LCTRTFKSKVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQAQRLDSLELFRKQEVDF 467

Query: 364 LLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDVELIH 423
           L+ATDVA+RGLDI  V  VINY  PR    YVHRVGRTARAGR G AV+F+T +D  L+ 
Sbjct: 468 LIATDVAARGLDIIGVQTVINYACPREIDSYVHRVGRTARAGREGYAVTFVTDSDRSLLK 527

Query: 424 EIEANLGKQLESFECKEDEVLENITKVYKARRVAAMKMVDDGFEEKVKERKEQKLKTLSE 483
            I   +G +L+S    E  ++         +    +  ++D +   +   ++++    +E
Sbjct: 528 VIAKKVGSKLKSRVIPEQSIV---------KWSQIIDEMEDQYSAVISAERDERALRKAE 587

Query: 484 KGLLKKKNSRKRRRE 496
               K +N  + R E
Sbjct: 588 MEFAKAENMLEHRDE 591

[Close]

BLAST of Sed0019877 vs. TAIR 10
Match: AT1G20920.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 224.9 bits (572), Expect = 1.4e-58
Identity = 145/411 (35.28%), Postives = 224/411 (54.50%), Query Frame = 0


Query: 69  GLSEWIVETCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQRLSET 128
           GL+  I++T K+L  +KP  +QT  +P I++G D +G+A+TGSGKT  F LP+L+ + + 
Sbjct: 535 GLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQ 594

Query: 129 P-----FGVFALVITPTRELAYQLAEQFRALGSCLNLRCSVIVGGMNMLNQTQSLLKRPH 188
           P      G   LV+ PTREL  Q+    R     L +RC  + GG  +  Q   L +   
Sbjct: 595 PPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTE 654

Query: 189 IVVATPGRVKVLLEENPDIPLIFSRTKFLILDEADRVLDVGFEEELKVIFQCLPRNRQTL 248
           IVV TPGR+  +L  +        R  FL++DEADR+ D+GFE ++  I Q +   RQT+
Sbjct: 655 IVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTV 714

Query: 249 LFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFI-PKNVKDVYLLHILSKM 308
           LFSAT  + +ETL     NK    +   G   V+    Q V + P++ + + LL +L + 
Sbjct: 715 LFSATFPRQVETLARKVLNKPVEIQV-GGRSVVNKDITQLVEVRPESDRFLRLLELLGEW 774

Query: 309 EDMGIRSAIIFTQTCKICHHLGLLLEELDQEMVALHSFKSQAERLSALYRFKSGRVPVLL 368
            + G    ++F Q+ + C  L   + +     ++LH  K Q +R S +  FK+    +L+
Sbjct: 775 SEKG--KILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNLLI 834

Query: 369 ATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDVELIHEI 428
           AT VA+RGLD+  ++LV+N+D P    DYVHRVGRT RAGR G AV+FI+++D +   ++
Sbjct: 835 ATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKYAPDL 894

Query: 429 EANLGKQLESFECKEDEVLENITKVYKARRVAAMKMVDDGFEEKVKERKEQ 474
                  +++ E  E  V ++            +K + DGF  KVK+  EQ
Sbjct: 895 -------VKALELSEQPVPDD------------LKALADGFMVKVKQGIEQ 923

[Close]

BLAST of Sed0019877 vs. TAIR 10
Match: AT1G20920.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 224.9 bits (572), Expect = 1.4e-58
Identity = 145/411 (35.28%), Postives = 224/411 (54.50%), Query Frame = 0


Query: 69  GLSEWIVETCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQRLSET 128
           GL+  I++T K+L  +KP  +QT  +P I++G D +G+A+TGSGKT  F LP+L+ + + 
Sbjct: 197 GLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQ 256

Query: 129 P-----FGVFALVITPTRELAYQLAEQFRALGSCLNLRCSVIVGGMNMLNQTQSLLKRPH 188
           P      G   LV+ PTREL  Q+    R     L +RC  + GG  +  Q   L +   
Sbjct: 257 PPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTE 316

Query: 189 IVVATPGRVKVLLEENPDIPLIFSRTKFLILDEADRVLDVGFEEELKVIFQCLPRNRQTL 248
           IVV TPGR+  +L  +        R  FL++DEADR+ D+GFE ++  I Q +   RQT+
Sbjct: 317 IVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTV 376

Query: 249 LFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFI-PKNVKDVYLLHILSKM 308
           LFSAT  + +ETL     NK    +   G   V+    Q V + P++ + + LL +L + 
Sbjct: 377 LFSATFPRQVETLARKVLNKPVEIQV-GGRSVVNKDITQLVEVRPESDRFLRLLELLGEW 436

Query: 309 EDMGIRSAIIFTQTCKICHHLGLLLEELDQEMVALHSFKSQAERLSALYRFKSGRVPVLL 368
            + G    ++F Q+ + C  L   + +     ++LH  K Q +R S +  FK+    +L+
Sbjct: 437 SEKG--KILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNLLI 496

Query: 369 ATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDVELIHEI 428
           AT VA+RGLD+  ++LV+N+D P    DYVHRVGRT RAGR G AV+FI+++D +   ++
Sbjct: 497 ATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKYAPDL 556

Query: 429 EANLGKQLESFECKEDEVLENITKVYKARRVAAMKMVDDGFEEKVKERKEQ 474
                  +++ E  E  V ++            +K + DGF  KVK+  EQ
Sbjct: 557 -------VKALELSEQPVPDD------------LKALADGFMVKVKQGIEQ 585

The following BLAST results are available for this feature:

BLAST of Sed0019877 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149766.1	2.7e-245	88.58	DEAD-box ATP-dependent RNA helicase 36 [Momordica charantia]	[more]
KAG6605347.1	3.5e-245	89.60	DEAD-box ATP-dependent RNA helicase 36, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_022947338.1	6.6e-244	89.40	DEAD-box ATP-dependent RNA helicase 36 [Cucurbita moschata] >XP_022947339.1 DEAD...	[more]
XP_038900331.1	3.3e-243	87.98	DEAD-box ATP-dependent RNA helicase 36 [Benincasa hispida]	[more]
XP_023534745.1	2.8e-242	88.78	DEAD-box ATP-dependent RNA helicase 36 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0019877 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SA27	8.6e-178	65.79	DEAD-box ATP-dependent RNA helicase 36 OS=Arabidopsis thaliana OX=3702 GN=RH36 P...	[more]
Q8L4E9	1.5e-145	56.54	DEAD-box ATP-dependent RNA helicase 36 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q9Y6V7	1.9e-108	48.56	Probable ATP-dependent RNA helicase DDX49 OS=Homo sapiens OX=9606 GN=DDX49 PE=1 ...	[more]
Q4FZF3	6.1e-107	47.33	Probable ATP-dependent RNA helicase DDX49 OS=Mus musculus OX=10090 GN=Ddx49 PE=2...	[more]
Q55BR9	1.1e-103	47.75	Probable ATP-dependent RNA helicase ddx49 OS=Dictyostelium discoideum OX=44689 G...	[more]

BLAST of Sed0019877 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D9D5	1.3e-245	88.58	DEAD-box ATP-dependent RNA helicase 36 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1G6B4	3.2e-244	89.40	DEAD-box ATP-dependent RNA helicase 36 OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1L281	5.7e-241	88.38	DEAD-box ATP-dependent RNA helicase 36 OS=Cucurbita maxima OX=3661 GN=LOC1114997...	[more]
A0A5D3CBL8	1.3e-240	87.53	DEAD-box ATP-dependent RNA helicase 36 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3C309	1.3e-240	87.53	DEAD-box ATP-dependent RNA helicase 36 OS=Cucumis melo OX=3656 GN=LOC103496288 P...	[more]

BLAST of Sed0019877 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G16280.1	6.1e-179	65.79	RNA helicase 36	[more]
AT5G60990.1	2.7e-94	43.88	DEA(D/H)-box RNA helicase family protein	[more]
AT4G16630.1	5.9e-65	37.93	DEA(D/H)-box RNA helicase family protein	[more]
AT1G20920.1	1.4e-58	35.28	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT1G20920.2	1.4e-58	35.28	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 82..282 e-value: 5.3E-51 score: 185.4
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 94..267 score: 30.767086
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 321..402 e-value: 9.9E-29 score: 111.4
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 295..402 e-value: 4.6E-26 score: 91.3
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 294..424 score: 19.606293
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 273..423 e-value: 2.9E-43 score: 149.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 33..268 e-value: 5.4E-70 score: 237.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 131..413
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 87..256 e-value: 2.7E-43 score: 147.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	PANTHER	PTHR24031:SF240	ATP-DEPENDENT RNA HELICASE DDX49-RELATED	coord: 62..416
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 62..416
None	No IPR available	CDD	cd18787	SF2_C_DEAD	coord: 279..411 e-value: 8.05013E-52 score: 168.455
None	No IPR available	CDD	cd17955	DEADc_DDX49	coord: 65..268 e-value: 1.03938E-119 score: 344.978
IPR000629	ATP-dependent RNA helicase DEAD-box, conserved site	PROSITE	PS00039	DEAD_ATP_HELICASE	coord: 213..221
IPR014014	RNA helicase, DEAD-box type, Q motif	PROSITE	PS51195	Q_MOTIF	coord: 63..91 score: 10.552991

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0019877.1	Sed0019877.1	mRNA
Sed0019877.2	Sed0019877.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009561	megagametogenesis
biological_process	GO:0009791	post-embryonic development
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005634	nucleus
cellular_component	GO:0090406	pollen tube
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003724	RNA helicase activity