Sed0019798 (gene) Chayote v1

Overview


Name	Sed0019798
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Nuclear transcription factor Y subunit
Location	LG05: 12159514 .. 12169770 (+)
RNA-Seq Expression	Sed0019798
Synteny	Sed0019798

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTTGCATGGGATTTTTTTTGTTTAGAGAATGGAGTGAAATTGAGATCTTATGCCGGTGTTATGTTTGTTGTCTGCATGTGGGGATTATTATGGTCCTTGCACTCCTCAGTTGCTGAATTTTGATTGTTTGAGTCAATTTTAGCGGCGCCCATCTCTGGAACTTGTTTTTTCTGTTTTCTTGTTTGATTTGCATGTGGTTCAAATGAGGTTGGAATGTCAGTCCTCCCAAAACAGAGTTATTGAACTCTTTTAGTTATCCCTACCCCTTTGCATGTGGATCGTTGGTATGCAAGATACTGACTTATTGGCTGGAGTGTTTTGCAGGAGTCATTCATATTTCATACATCTTTCAAAAGTTGTAAGTGTGATATAAAAAGGTCCTATTATATTTTTTAGTCTAGCATGAAAATAGGAGTGTAATAAGATAGAAAAAAATGGTTTCAAACCTAGGCATGGAAAAAAATTGAGTTTCTTTCAACATTAGTAAAATTTTGTTTAAGTTTTGAATTAAATATTAGGGATGATCTTGGATTTCTGTTCTATGTTGGTTAGAATTTAGATACTTTCAGTGTTTTCAAAGCGCAAGGCGCAATGCAAGGCGATACTCTCTTTGATCTCCTCAAAGCGAGAGGCGATAAAAAGGCGAGGTCCGAGTGAAGAGAGGCGCATTTATAAATTGATAATAAAACATATGTGTATTCCCAAAAGATTTCAAATTCATATGGAAAAATATTAAAAAGTAAAAAATAAAAGAATAATAAATCACAAAAATTATGTTATTATAAGATATACCCTACTATTAAATTATTATTTGTATAAAAAATTGAAGTTAACTGAAAGTATAAAAAAAATAAAGATTCTACGTCAAATAAGTCAAATAACTCAAATAAACAGACACATATATTTGAAATAACAATTAAACAAATTCAGTATCTTTAATAAAGACTTTGCATAGTTGTTGGACTTCTTCATAAACTAATTCTAGGTTCTTTTTGTGGATATTAAGTTAGGATATTGATAAATAAATAAAACTTTAACAAGGCGCACACTTTTGCCTGAGGCGAAGGCGATGCAGCCTGGTTGAAGGAGCTCGCCTTTGCTACGATAGTGGCGCAATACCTACTTATGTAGTTATGTATATGGCCAGTGCAAGGCGATGCCGATGGCTATAGGCGAGGAAAGGCGATGGTCTTGAAAACACTGGATACGTTACACCTATGTCTCTTCGAAGTTGAAAAGTTAGAAGTTCCAAAATGTGATTTAGCCGACGTCTGTAAAATATTCCCGCTTTCAAAATTCTACAAGCAAAAAATTGAAATTTACTTGGTTTCCATCTTCCTAATCATCAAACTCATTGATGATTATTAACAAGCTTTGCTTTGAAGACTTGAAGAAATTAAAGGTGTAGAGCGTTTTACTTTTAGTGATATGCCTCATTCAAGCGAATAATGAGCAATGCTCAGCACAGGGGTTGGATTGAGTTGAAGTATACTAAAAAAGAGTTAGATAATCATAAATGGAAAGAACTATAAAACATTGTTAATTGTAAGGATGGCATTTGTTGCTGTTTGAGGTTAAACCTAAGAAATCAAACTATTCTCCCTTTTTTTCAAAATGGATTAATGAATTTGGATGATTTCTAAAGTTTTGTTTTTTAGCGAATGATGCTTCATTTTTCCTCTTTTCTTTTGACGACACTTTTTTCAATGTTGTTATCATCGATTCTTCTGTTTGTTCAACTTTGGTTCTGCACGGTCTGTGTACTCTACTGGACTTCATCCTTTTATCTTTCTAACTCGTATATTTGTTAAGAAGGTATGCAGTCAAAGTCAAAAAGTGTGAATCAACTTGAATCTGAACCACCAAATATGCAGCAGACTAGTTATTCTGACCCTTGGTGGCGTAGTATTGGGTACAATCCTATCTCCTCGTCAGCAGCAGGAGGAAATGTGTCTAATTCGCCATCACTGGAGTGCACTAATGGTGCTTCAGAATCTAATGATGGCCAGTCAATGTCAAATGATAATTTGACTGAAGACGATGATGACACCACAAAAGATTCACAAGGTATATCCCTCAATCAACTAGGTGCTTTTGCTTGCTTAATCATGTTGTGGTTCAAAGAAACGGGTTTGTTATGAACAATAAAATTACTGTACGTTATCTTGAAAGCTGAGGGCAGTGTAACCTTATGGGATTGTTAACAAATATGTTATTATCAAATTCAGCTCCAAGTTATGGGCAAGGACAGCACAACAGTCAGCTTGCTGTTTCTACTGCACCTACAGTGCATGGTGGATGTCTCACACAACCACCTCAGCTTGAACTTGTAGGCCACTCTATTGTGAGTTCCTTTGTTATATTTTGATTTATTTCTTTCTTATTTTATAGACATTGGCTTTTTGAAACACGTCAGATTTAAGATGCTTATGAATTTGGTGGGCTTACTAGTTTTTGTTAAATCCTTTTTTAGGCATGTGCATCAAACCCGTATCAGGACCCTTATTATGCTGGAATGATGGCTGTTTATGGTCATCAACCTATGGTATGTAGGATAAAATCATAAAAGATCAGGTGATGGTATGAATACACACACATATATACATATCTTACTTTAGGTATATATTTTACACCTGGTGGAGTAATTTTGATAGTTCTTGTACTTTTTTGTTTGTTTGTTTTTTTTTTTTTTCCTTTTGATTTCTTTTTCAATTTTTCAGGAATTTCGTTGTTTCTGGTACAGATTTTCACTTTTGCTAACTTTCTTTGAAGTAAAAATAAAATAGCATGAGTATCTGGAGGACTGAATGGAAATTTTCAGTTTCTTTGAAGAGGTCGTAGTGTGATTATTGTAGCATCTCTGCCTGTAATTTTTTTTATTTCTTTTTTCTGGGCACAATGAAAAGATCATATTTCCAGGATGTTTGTGGTCATTGTGGATTGTTGTCAATTTTTCCTGGTACATAAGAATTAGGTTTGCCCCTGACAATTACTTCTTATGGTAGGTTTATCCTCCTTTTCTTGGAATGTCACATGCTAGAATGGCTTTGCCCCTGGAGGTGACACAGGAGCCAGTTTTTGTGAATGCGAAACAATATCAAGGCATTCTAAGAAGAAGACAAGCACGTGCTAAAGCAGAGGTTGAGAACAAACTGATAAAAGTTAGAAAGGTACAACTGCTATTCAAAAGTTAGATAACTGTCCTTCATATACTAGAGGTCGTCTCTTATACTTGTTAAGGTAGGTGGGAATCTAGTATCATTTTTCTTAATTGTATTATATTTTTTATGAAGTTCATTCTGATACGATCCGGTTTATTATTAGTATTTATTTAGTTATTAGTATTTAATTGTTATTTTTTATTTTAATTGTAATGGTCATTTATGGATTATTAGTCTTTTATTATTAAATTAGGTTATTATTAGGTTTACTTAGTGGCTAGGGTTTAGGTTTATAAATAGGAAATGTTAGATCATTGTTAGGTATTGGAAATAGTTGTTGTCTTTTGTATTCTAGCTCCAAGGGAGATTCTCTCTAGAGATTTATCAATAAAAAGTGACACATTCTATCATTTTGGTATCAGAGCCGTTTACTGATTCGGGAATGGTCTCGACTAGGATGGAAACAAGGATTCACGAATGCGAAGGAAAGTCAGTCTATTTGTTGAATAAGCAACGAGAATTGGAAGCAAAGATGGAAGCAATGGAGGAGCGGTTAGGGAAAATGATTGATTCGAAATTCGAGAAACTTAATTTGAAATTCGAGCAGATGAACTGTTATTTTCAGATTTTGTTATAGAGCGAATCTTGGACAACCGATTACCAAAACAAGCACTGTTGACAAGGGAAAAGGGATTTCGATCCATGTTGATGTGAAAGGCTCCAGCGCGGCTGATGCGACAGGGGGTTCGGGCTCGGCGGTAGAAGCAGTAAAAGCGGCGGTGAGCTCGGCGATGGGCACATGGTCACGGGTTTGAGCGGGGGAGGGCGCACAGGCACAAGCATGGGCTTCGGCTTGGGCATGGGCTTGGGCTCGGGGGTTGCAGATGGGGGGCACGGCTGCGGGGTCGGGCGTGGGATGGGGCTCTGGTGGGACGGATGGTGGGCGCGGCTGCAAGTGCGGGCTAGGGCTGGGGCTCGAGTTGCGAGGAAGGCTGGTGCGGCTATATCTGGGGTGCGGGTAGGGACAGCGTGCGCGACTGGGGTGTGGGCTCAGAGTTGTGTTGCGCTGGCAGACCAGGTCGAGCAGAGCTGACTGGACCAAGCTGGTCAGGGTTGGCTAGTTTAGACCGGAGGGAGGGGGGGTTGAATGGACCATTTGACGGGAGAAACTTGAGGGGACCAGATGGCGATCGTCATGGAGATTTTAGGTTCAATCGGAGGGGCGATAGATTTCTGGAGGAGAGAAGGGTGCACACCGGCTATAATAGACCGTTAGCGCATGATGGTTGGAACGAATGTAGTTGGGGTGACAATTTCTGAAATACGGGATGTGAATGTGGGCGGGGAGGAGAAGAGAGGTTTGAGCGGGGAGGACGGAGAGCAGCGGGAAAGGAGGGACCAGTGAGTAACAAGAGATTTAGAAAGTTGGAGATGCCGGTTTTCAAGGGTCTTGCCGATGAGAATCCGATGGGGTGGTTAAGCCGGGTTGAGCGATACTTTCTGGTAAATAAATTGACTGAATTTGAAGCGGTGGATGCAGTGGGGTTGTGCTTGGAAGGAGAGGCGTTAGAACGACTTCAGTATGAGGAGGACCAAGCCCCCTTTCGTTCTAGGAACGAATTCAAGGACTTGTTAGAGCGTTTCCAACCGACTTTACAAGCAAACAAGTATGCAAATTTTATGAGTTTAAAGTAGGTAGGAACGGTGAAAGAATGTCGTCGGTTGTTTGAGTGCTATGCTAGAGGAATGCGTGATATAAGTGCAAGCGCAATAGAGGGAAAATGGGAAAGTGGCTTGAAGGAGGAAATACAGAGCGCAATGCGTAAACTTCGACCAGTAGGCATCGAGGATAAAATGTTGATGGCTCAGGTGATTGAGGATGATTTTGTTTTACAGGTTGCCAAGAACGGGGGATGTAATTCTGCAACGCTCAAGTCTGAAATAGGGACGACAGTTTCAAGACCTGACGATCCAGAAAGTTCTTCCACCAAGACTACAACCGTTACTCTGATGTTTTTAAAACACTCACTGAAGCGTAAATTCGAGCACGAAAGGACAAGGGGTTATGCTTCCGCTGTGATGAACGGTTTGTGCCGGGGCATCGTTGTCAGAAGAAAGAGCTCCTGGCCTTGGATGTGTGGGTCGTTCGGGATACAAACGATTACCAGGATGCCGGTGCAAAGATTTTTCTCCAGAGGACGGAATTGTGGAAGATGGCTTCGGAGATGGAACACCTTGAGGACAAGTTGGCTCTTTGGGGGGAAGTATTGATACGATCCGAGCCATCTATTATTAGTATCTATATAGTTATTAGTATTTAATTGTTATTTGTTATTTTAATTGTAATGGTCATTTATGGATTATTAGTCTTTTATTATTAAATTAGGTTATTATTAGGTTTACTTGGGGGTAAGTTAGAGGCTAGGTTTTAGGTTTATAAATAGGAGATGTTAGGTCATTGTTAGGTATTGAAAATAGTTGTTGTCTTTTGTACTCTGGCTTTAAGGGAGATTCTCTCTAGAGATTTATCAATAAAAAGTGATAGATTCTATCACATTCTTCTCTATACTGCAAATTTGATTAGGCACTTGTAAAATTCTCTTACTGAGTAGTGAGTACTTTTTACTCACTGTTTAATGACCATAAACATGTGAGTGAAGGGCAAGTAAAAAATTATTTTGTTGTGATGGACAATGAAGTGGATGTACTCACGTAGATTTTTTAAAATAGGTATAAACTTTTCTTTTCAGTGGTGATTTTCTTGGGAATATAACTTGATTTATCCATTCTACTTTTACTTGCATATGTTGGATTATGGTATCATTATTGCCGAATTGATTACCTTGAAAAGGATTTTTCTAATAATCAGATCAGATTCAATGGAAGTAAGAAGAAACCTAAGATTGCAAGCTCAAACTTATTATAAGAATTCTCGAGTGCTAAGATGATTTTTTTATCACTGGGAATTGGAGTTTTGTCCCAATACATACCGGGGTGTGGCACAAGTCCCTACACTCGGACCGGAATATAACAAAGGGATTTTACAATTAAGTTCACTTGTGGATTCGGTTCCCTTGAGTCTTCAACACCTTATTTCAATACCTTACCAGACTGATACAATTATACAGAGTAGAAAAGTAACATGTAAGACTAGAGGTTGTCAACTAAAGGTAAAATTATAATAAACTGTCTCCAATTCTATATATACAGCTCTGAATTGTCAGCTAGCTCTTCCCATTTCCCGGTTCGTGAATCAAAGCCTTTAAGGTTTTAACTCTGAGCCTTCTTTTACCTTTCATGTTGAGTATGTGGTTACTATGTATGGTTGTAACGACCCGACCCGAAAGGGGTTCTAAAATAGGCCGTTACCTCAATGCATGCATACAAATCTGCAGAAAATTTGCAAGATGGTGTTCGGATTCTAAGTAAAAACTAAAACATAAAACATCCATTTAAAAATCAACATCATTTCCTCAAACTCATCCCTGTTTCCAAGCACTGCTCCAAGACAAATACATTTACAAAACTTACTCTGATCAGAGATTTATTTAAAACATACAAGCTTTACAATAGTGCTAGAATCCGGAAATACATTCAGAAAACACCCTAGGGCTCCGTGCCCAACTACATGCATTCAGAGAACATTTAGATCATAACATAAACATAAGACTCAGAGTTGAACAACGGGTTTCCATGATCACAGCTCCTCCTCCAGCCATCCTGTCTCGCACCATGGTTACCTGTGGAAAAACCACCAAAATAAGGGTGAGTAACGAATTACTCAGTAAGAATCCCCAACCGAGGTACAATACGATATAATCAGTCATCTAGTACCAAAGCATGCAAGCAAACAGCTACCAACACAGATCATAGCTCAACGAGCTCATAAAGAAAGATCTGGAGTCATCGGAAGTCTCCTACTTCCAGCCTAAGGATTGGATACACTGACCAATCCAGGGACATCACCGAGGTATCTTTCACTCGGGGGGAATACACTGATCCCAAGAATGTCCTCAAGGGCCTCCTTGCCCTTCAACTAATCTGGACTTACGGGAGAGTACCCGAAGTCCGGCTCTAACGGAAGGAATGGTGTACTCACGACATTAGCCCGGGAGCTCTCCGACCGAAGAACTAATGCGTGTGCGCGCTGCACCGCATGCTTTCGCAACCGCGTAAATGCGGGGCCTAAGGGCAAACTACGCGGGCGGTATGCATGCCTATGACTCGGAAGAGGTGTCACCGATCACGATGGCGCGAGGCCCCCTGGCGCCATCTCATGGCAAAGATGATCCACCGACTGAAGCTAAGAACCGGCCAGGCGGGCTTACACCGATGGCGGGTTCCGCTCTAGCAGAGCTACAAACTAGGCTTATGCCGCGGGGGTAGCTAACTCCACAACCGGCGGGTCGGGGAAGCAAGATACGTTATCTCGCGCACACTTTACTCCCGATCAGTGGGGACAAAGTACGTTATGTCCGCTCAGCCTCTAGATGATGACAAACCCTACAACTCTATCTAAGAGTACAGAGTAAAAATCAATGATTCCTGGCTAGCAAACAATGACCGACATCAAACACATTACCTACCATGATACTACGAGCTTAAGCAGGAATCATAAGCATGCTGGCAGAACAAACCTAGCATGGCACTAACATGTAAAATCAGACAAACATGCTAGCAAGAATTCAATCAAACACCGCTTCTATCTCTAACATGCTCATAATAAACAAAAAAAAACAAGGCATATCATGAAAAATATCGCAGGGCCCACACAACTCCGGTAAGAAATCCTTACCTGGTCGGAAGACAACAACACACAATAAAATTAACTGCGATCGAACCCGAGCAACCTATAGCGAGCCAAACAAACACATCAATAATCAAACAATAGGCCTAAATAATAATAAAATAAACAGGGCTCGGCTCGGGAGCAACCAAACAATAGGCCTAAATAATAATAAAATAAACAGGGCTCGGCTCGGGAGCAACTCACGAGGCGCGGCTGACACGCGAACGAGCCACCGCCGCACGGGCTAGGCAAAAGGCGGGCGAGAGCGCAGGTCGGGCATTGGGCGCGCGGCGGACGGCGACATGTGATGCGCGCGCGCGGCGGCAAGATGGGGACAACGCCGCGGCGCGAGCGACACACGACGCGACGGCTCGGCCTTTGGCGACACGGCGCAGAGCGAGACTGGCGACACTGCGCGGCGGCCGGCGGGCGAAGCTTGGTGGCAGCGACGCGACGACCGGCGCGCGAGGCGACACGGACCAGGGCGAGGACGCGCGACACGGAACAGTGCAGGGAGACTCAAGTGCGGACGGACACGAGCTGGGCGAGGCTCGGGCTGGCGACCTGGGCGACGCGAGCAGGGGCTGGGGCGACACTGTGCGACGCGGCTGGGCAGTTGGGGCTCGGGCTTGGGCGACGCTGGCACGACCTGGGCAGGGCGGGGCTTGGGCTGGCTGGGCTGGGTGGGGGAGCGGGCTGGCTGGGCGAGCTCGGGCTAGATGGGCGAGCGGGCTGGCTGGGCTAGCTCGGGCTGGCTGGGTTGGGCGAGCCAAGGGGCTGGGTCGGGCTAGGTGGGGGCTAGCTCGGGGAGAGAGGTTGAGAGAGAGAGAGAGAAAATGGATTTTGGGAAAAAAAAAAAAGAAAATGGGAAATAAAAAGGAAAAATGGGAAAAAGGGAAAAATGGGATTTTATCTCATTTTTCCATACTTATCCAAATTTTAAAACCTCAAAAATCCTTAAAATCCCATTTCCCGGCTTCCTCCTTCGAGACCCGACCGAAGCAACCTTTTCCAATAAACAAACTCACTTAAATCCAACTCCCAAATCAACACTGAGGGCCCGGGCTCGAATCCCAAAAGAAACACCCAAACAACCATCACTTTGCCAAAGCCCAAAATACAACCGAGCATCCAACCGACTAGCCCAAACATCTCGGGACTCGCAATCCACAACAAACAAGCCTCGACAAAGGCAGGAGCTTCCTCGAAGCCCTGAAAACCACAAATCCTGCCCGGGGAGCCAAAAGACCAAAATACCCCTAAGGGTCACAACGGCTCTAAGACCCAACCAAACAACCGAATCTTGACCCGAAGGCACCTCGAAAACTGGAATAGGAAACTGGGCTGTTACAATGGTTGACTCAATAATTTAAAATTTGACTGAAGCGAAGCTTGTCTTTCTAAATTTCATGTCAAGGGGTGCGGTAACTGCAGAGGTTATAGTAACCTATCTCTAGTGCGTGCGTTTATGCGGAGGTTATTATAACATAGGATTTCATTATAATAGATGTTATATCTGGGCGAGAGGGTTATATAGTTAGGATGACTGATGAGGGGTTATTAGGTAACCCATTAGTTATGATATCTAGTGATTTAAACACACCCAACCTAAACCACCCTTAAATGGTGGCCCAAATGCCTAATAGTTAATTTATTATTAGTTGAAACAAATATATGGCTTGGCTGACTCGAGAATAGTTTTTTGAACACTGCTCTAACAGCGAGGGGATGGCTCGTTGTTGGTTTTGTATGCGTTATCGGAGTGATAACTTTCATTTCCTCTTTTCTTTTCTTTGTTCCTATCTGGGCAGATATTTTGCTATATGCGTGTATGTATGTTTTCGAAGTATTACTAATATTTAGTTAATGTTGAACAGCCATATCTTCATGAATCTCGTCACCAGCATGCCATGAGACGGGCAAGGGGTAGTGGTGGACGTTTTGCCAAGAAAAATGAAGCTAAATCTTCGAGCTCTGCTATGAAGAACAAGGAATTCGGTTCTGGTCAAGCTATGCCATCGCAGTCTGCTAGTTCATCTGGTTCTGAAGCTGTGCCTGGTGTCTTGACTGAAACCTGGAACTCTTCCAAGGGTCAACCTGAAGCAAGGGCTCAGTTTCATGAGGAATATGAAGCTCGTAGGTATGTGAATGACCGTAGCCATTTCCATAACTACGGTAGCTTCCAAGCTTCTTCTTCATACGCTTTACTTTCTGGTGAAAGAGGCGAAGATGGAGACTGTTCGGGACAGCAACGAGGAAGTATCTCAGAAAATCAGGCCGCACAGAGGCGTCTTGCCATCAAGTGA

mRNA sequence

CCTTGCATGGGATTTTTTTTGTTTAGAGAATGGAGTGAAATTGAGATCTTATGCCGGTGTTATGTTTGTTGTCTGCATGTGGGGATTATTATGGTCCTTGCACTCCTCAGTTGCTGAATTTTGATTGTTTGAGTCAATTTTAGCGGCGCCCATCTCTGGAACTTGTTTTTTCTGTTTTCTTGTTTGATTTGCATGTGGTTCAAATGAGGTTGGAATGTCAGTCCTCCCAAAACAGAGTTATTGAACTCTTTTAGTTATCCCTACCCCTTTGCATGTGGATCGTTGGTATGCAAGATACTGACTTATTGGCTGGAGTGTTTTGCAGGAGTCATTCATATTTCATACATCTTTCAAAAGTTAAGGTATGCAGTCAAAGTCAAAAAGTGTGAATCAACTTGAATCTGAACCACCAAATATGCAGCAGACTAGTTATTCTGACCCTTGGTGGCGTAGTATTGGGTACAATCCTATCTCCTCGTCAGCAGCAGGAGGAAATGTGTCTAATTCGCCATCACTGGAGTGCACTAATGGTGCTTCAGAATCTAATGATGGCCAGTCAATGTCAAATGATAATTTGACTGAAGACGATGATGACACCACAAAAGATTCACAAGCTCCAAGTTATGGGCAAGGACAGCACAACAGTCAGCTTGCTGTTTCTACTGCACCTACAGTGCATGGTGGATGTCTCACACAACCACCTCAGCTTGAACTTGTAGGCCACTCTATTGCATGTGCATCAAACCCGTATCAGGACCCTTATTATGCTGGAATGATGGCTGTTTATGGTCATCAACCTATGGTTTATCCTCCTTTTCTTGGAATGTCACATGCTAGAATGGCTTTGCCCCTGGAGGTGACACAGGAGCCAGTTTTTGTGAATGCGAAACAATATCAAGGCATTCTAAGAAGAAGACAAGCACGTGCTAAAGCAGAGGTTGAGAACAAACTGATAAAAGTTAGAAAGCCATATCTTCATGAATCTCGTCACCAGCATGCCATGAGACGGGCAAGGGGTAGTGGTGGACGTTTTGCCAAGAAAAATGAAGCTAAATCTTCGAGCTCTGCTATGAAGAACAAGGAATTCGGTTCTGGTCAAGCTATGCCATCGCAGTCTGCTAGTTCATCTGGTTCTGAAGCTGTGCCTGGTGTCTTGACTGAAACCTGGAACTCTTCCAAGGGTCAACCTGAAGCAAGGGCTCAGTTTCATGAGGAATATGAAGCTCGTAGGTATGTGAATGACCGTAGCCATTTCCATAACTACGGTAGCTTCCAAGCTTCTTCTTCATACGCTTTACTTTCTGGTGAAAGAGGCGAAGATGGAGACTGTTCGGGACAGCAACGAGGAAGTATCTCAGAAAATCAGGCCGCACAGAGGCGTCTTGCCATCAAGTGA

Coding sequence (CDS)

ATGCAGTCAAAGTCAAAAAGTGTGAATCAACTTGAATCTGAACCACCAAATATGCAGCAGACTAGTTATTCTGACCCTTGGTGGCGTAGTATTGGGTACAATCCTATCTCCTCGTCAGCAGCAGGAGGAAATGTGTCTAATTCGCCATCACTGGAGTGCACTAATGGTGCTTCAGAATCTAATGATGGCCAGTCAATGTCAAATGATAATTTGACTGAAGACGATGATGACACCACAAAAGATTCACAAGCTCCAAGTTATGGGCAAGGACAGCACAACAGTCAGCTTGCTGTTTCTACTGCACCTACAGTGCATGGTGGATGTCTCACACAACCACCTCAGCTTGAACTTGTAGGCCACTCTATTGCATGTGCATCAAACCCGTATCAGGACCCTTATTATGCTGGAATGATGGCTGTTTATGGTCATCAACCTATGGTTTATCCTCCTTTTCTTGGAATGTCACATGCTAGAATGGCTTTGCCCCTGGAGGTGACACAGGAGCCAGTTTTTGTGAATGCGAAACAATATCAAGGCATTCTAAGAAGAAGACAAGCACGTGCTAAAGCAGAGGTTGAGAACAAACTGATAAAAGTTAGAAAGCCATATCTTCATGAATCTCGTCACCAGCATGCCATGAGACGGGCAAGGGGTAGTGGTGGACGTTTTGCCAAGAAAAATGAAGCTAAATCTTCGAGCTCTGCTATGAAGAACAAGGAATTCGGTTCTGGTCAAGCTATGCCATCGCAGTCTGCTAGTTCATCTGGTTCTGAAGCTGTGCCTGGTGTCTTGACTGAAACCTGGAACTCTTCCAAGGGTCAACCTGAAGCAAGGGCTCAGTTTCATGAGGAATATGAAGCTCGTAGGTATGTGAATGACCGTAGCCATTTCCATAACTACGGTAGCTTCCAAGCTTCTTCTTCATACGCTTTACTTTCTGGTGAAAGAGGCGAAGATGGAGACTGTTCGGGACAGCAACGAGGAAGTATCTCAGAAAATCAGGCCGCACAGAGGCGTCTTGCCATCAAGTGA

Protein sequence

MQSKSKSVNQLESEPPNMQQTSYSDPWWRSIGYNPISSSAAGGNVSNSPSLECTNGASESNDGQSMSNDNLTEDDDDTTKDSQAPSYGQGQHNSQLAVSTAPTVHGGCLTQPPQLELVGHSIACASNPYQDPYYAGMMAVYGHQPMVYPPFLGMSHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEAKSSSSAMKNKEFGSGQAMPSQSASSSGSEAVPGVLTETWNSSKGQPEARAQFHEEYEARRYVNDRSHFHNYGSFQASSSYALLSGERGEDGDCSGQQRGSISENQAAQRRLAIK

Homology

[Close]

BLAST of Sed0019798 vs. NCBI nr
Match: XP_022995109.1 (nuclear transcription factor Y subunit A-1-like [Cucurbita maxima] >XP_022995110.1 nuclear transcription factor Y subunit A-1-like [Cucurbita maxima])

HSP 1 Score: 553.9 bits (1426), Expect = 9.7e-154
Identity = 300/346 (86.71%), Postives = 312/346 (90.17%), Query Frame = 0


Query: 1   MQSKSKSVNQLESEPPNMQQT-SYSDPWWRSIGYNPISSSAAGGNVSNSPSLECTNGASE 60
           MQSKSKSVNQ+ESEPPNMQQT SYS+PWWRSIGYNPI  SA GGNVSNSPSLECTNGASE
Sbjct: 1   MQSKSKSVNQVESEPPNMQQTGSYSEPWWRSIGYNPIYPSATGGNVSNSPSLECTNGASE 60

Query: 61  SNDGQSMSNDNLTE--DDDDTTKDSQAPSYGQGQHNSQLAVSTAPTVHGGCLTQPPQLEL 120
           SNDGQSMSN +L E  DDDDTTK++QA SYGQ QHN+Q AVSTAP VHGGC+TQPPQLEL
Sbjct: 61  SNDGQSMSNADLNEDDDDDDTTKETQAASYGQSQHNNQHAVSTAPRVHGGCITQPPQLEL 120

Query: 121 VGHSIACASNPYQDPYYAGMMAVYGHQPMVYPPFLGMSHARMALPLEVTQEPVFVNAKQY 180
           VGHSIACASN YQDPYYAG+MA YGHQPM YPPF+GM HARMALPLEV QEPVFVNAKQY
Sbjct: 121 VGHSIACASNQYQDPYYAGLMAAYGHQPMGYPPFIGMPHARMALPLEVAQEPVFVNAKQY 180

Query: 181 QGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEAKSSSSAMK 240
           QGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARG+GGRFAKKNEAKS SS MK
Sbjct: 181 QGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGTGGRFAKKNEAKSLSSTMK 240

Query: 241 NKEFGSGQAMPSQSASSSGSEAVPGVLTETWNSSKGQPEARAQFHEEYEARRYVNDRSHF 300
           NKE GSGQA+   S+SSSGSEAVPG LTETWNSS  Q EARAQ HE YEAR YVN  SHF
Sbjct: 241 NKESGSGQAI---SSSSSGSEAVPGALTETWNSSNSQQEARAQLHESYEARSYVNGNSHF 300

Query: 301 HNYGSFQASSSYALLSGERGEDGDCSGQQRGSISENQAAQRRLAIK 344
           HNY SFQA SSYALLSGERGEDGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 301 HNYSSFQA-SSYALLSGERGEDGDCSGQQRGSISENQAAQRRLAIK 342

[Close]

BLAST of Sed0019798 vs. NCBI nr
Match: XP_023533872.1 (nuclear transcription factor Y subunit A-1-like [Cucurbita pepo subsp. pepo] >XP_023533873.1 nuclear transcription factor Y subunit A-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 552.4 bits (1422), Expect = 2.8e-153
Identity = 299/346 (86.42%), Postives = 312/346 (90.17%), Query Frame = 0


Query: 1   MQSKSKSVNQLESEPPNMQQT-SYSDPWWRSIGYNPISSSAAGGNVSNSPSLECTNGASE 60
           MQ KSKSVNQ+ESEPPNMQQT SYS+PWWRSIGYNPIS SA GGNVSNSPSLECTNGASE
Sbjct: 1   MQFKSKSVNQVESEPPNMQQTGSYSEPWWRSIGYNPISPSATGGNVSNSPSLECTNGASE 60

Query: 61  SNDGQSMSNDNLTE--DDDDTTKDSQAPSYGQGQHNSQLAVSTAPTVHGGCLTQPPQLEL 120
           SNDGQSMSN +L E  DDDDTTK++QA SYGQGQHN+Q AVSTAP VHGGC+TQPPQLEL
Sbjct: 61  SNDGQSMSNADLNEDDDDDDTTKETQAASYGQGQHNNQHAVSTAPRVHGGCITQPPQLEL 120

Query: 121 VGHSIACASNPYQDPYYAGMMAVYGHQPMVYPPFLGMSHARMALPLEVTQEPVFVNAKQY 180
           VGHSIACASN YQDPYYAG+MA YGHQPM YPPF+GM HARMALPLEV QEPVFVNAKQY
Sbjct: 121 VGHSIACASNQYQDPYYAGLMAAYGHQPMGYPPFIGMPHARMALPLEVAQEPVFVNAKQY 180

Query: 181 QGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEAKSSSSAMK 240
           QGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARG+GGRFAKKNEAKS SS MK
Sbjct: 181 QGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGTGGRFAKKNEAKSLSSTMK 240

Query: 241 NKEFGSGQAMPSQSASSSGSEAVPGVLTETWNSSKGQPEARAQFHEEYEARRYVNDRSHF 300
           +KE GSGQA+   S+SSSGSEAVPG L ETWNSS  Q EARAQ HE YEAR YVN  SHF
Sbjct: 241 SKESGSGQAI---SSSSSGSEAVPGALAETWNSSNSQQEARAQLHESYEARSYVNGNSHF 300

Query: 301 HNYGSFQASSSYALLSGERGEDGDCSGQQRGSISENQAAQRRLAIK 344
           HNY SFQA SSYALLSGERGEDGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 301 HNYSSFQA-SSYALLSGERGEDGDCSGQQRGSISENQAAQRRLAIK 342

[Close]

BLAST of Sed0019798 vs. NCBI nr
Match: XP_022958505.1 (nuclear transcription factor Y subunit A-1-like [Cucurbita moschata] >XP_022958506.1 nuclear transcription factor Y subunit A-1-like [Cucurbita moschata] >KAG7035866.1 Nuclear transcription factor Y subunit A-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 548.5 bits (1412), Expect = 4.1e-152
Identity = 299/345 (86.67%), Postives = 312/345 (90.43%), Query Frame = 0


Query: 1   MQSKSKSVNQLESEPPNMQQT-SYSDPWWRSIGYNPISSSAAGGNVSNSPSLECTNGASE 60
           MQSKSKSVNQ+ESEPPNMQQT SYS+PWWRSIGYNPIS SA GGNVSNSPSLECTNGASE
Sbjct: 1   MQSKSKSVNQVESEPPNMQQTGSYSEPWWRSIGYNPISPSATGGNVSNSPSLECTNGASE 60

Query: 61  SNDGQSMSNDNLTE-DDDDTTKDSQAPSYGQGQHNSQLAVSTAPTVHGGCLTQPPQLELV 120
           SND QSMSN +L E DDDDTTK++QA SYGQGQHN+Q AVSTAP VHGGC+TQPPQLELV
Sbjct: 61  SND-QSMSNADLNEDDDDDTTKETQAASYGQGQHNNQHAVSTAPRVHGGCITQPPQLELV 120

Query: 121 GHSIACASNPYQDPYYAGMMAVYGHQPMVYPPFLGMSHARMALPLEVTQEPVFVNAKQYQ 180
           GHSIACASN YQDPYYAG+MA YGHQPM YPPF+GM HARMALPLEV QEPVFVNAKQYQ
Sbjct: 121 GHSIACASNQYQDPYYAGLMAAYGHQPMGYPPFIGMPHARMALPLEVAQEPVFVNAKQYQ 180

Query: 181 GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEAKSSSSAMKN 240
           GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARG+GGRFAKKNEAKS SS MK+
Sbjct: 181 GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGTGGRFAKKNEAKSLSSTMKS 240

Query: 241 KEFGSGQAMPSQSASSSGSEAVPGVLTETWNSSKGQPEARAQFHEEYEARRYVNDRSHFH 300
           KE GSGQA+   S+SSSGSEAVPG L ETWNSS  Q EARAQ HE YEAR YVN  SHFH
Sbjct: 241 KESGSGQAI---SSSSSGSEAVPGALAETWNSSNSQQEARAQLHESYEARSYVNGNSHFH 300

Query: 301 NYGSFQASSSYALLSGERGEDGDCSGQQRGSISENQAAQRRLAIK 344
           NY SFQA SSYALLSGERGEDGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 301 NYSSFQA-SSYALLSGERGEDGDCSGQQRGSISENQAAQRRLAIK 340

[Close]

BLAST of Sed0019798 vs. NCBI nr
Match: KAG6605918.1 (Nuclear transcription factor Y subunit A-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 548.5 bits (1412), Expect = 4.1e-152
Identity = 299/345 (86.67%), Postives = 312/345 (90.43%), Query Frame = 0


Query: 1   MQSKSKSVNQLESEPPNMQQT-SYSDPWWRSIGYNPISSSAAGGNVSNSPSLECTNGASE 60
           MQSKSKSVNQ+ESEPPNMQQT SYS+PWWRSIGYNPIS SA GGNVSNSPSLECTNGASE
Sbjct: 100 MQSKSKSVNQVESEPPNMQQTGSYSEPWWRSIGYNPISPSATGGNVSNSPSLECTNGASE 159

Query: 61  SNDGQSMSNDNLTE-DDDDTTKDSQAPSYGQGQHNSQLAVSTAPTVHGGCLTQPPQLELV 120
           SND QSMSN +L E DDDDTTK++QA SYGQGQHN+Q AVSTAP VHGGC+TQPPQLELV
Sbjct: 160 SND-QSMSNADLNEDDDDDTTKETQAASYGQGQHNNQHAVSTAPRVHGGCITQPPQLELV 219

Query: 121 GHSIACASNPYQDPYYAGMMAVYGHQPMVYPPFLGMSHARMALPLEVTQEPVFVNAKQYQ 180
           GHSIACASN YQDPYYAG+MA YGHQPM YPPF+GM HARMALPLEV QEPVFVNAKQYQ
Sbjct: 220 GHSIACASNQYQDPYYAGLMAAYGHQPMGYPPFIGMPHARMALPLEVAQEPVFVNAKQYQ 279

Query: 181 GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEAKSSSSAMKN 240
           GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARG+GGRFAKKNEAKS SS MK+
Sbjct: 280 GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGTGGRFAKKNEAKSLSSTMKS 339

Query: 241 KEFGSGQAMPSQSASSSGSEAVPGVLTETWNSSKGQPEARAQFHEEYEARRYVNDRSHFH 300
           KE GSGQA+   S+SSSGSEAVPG L ETWNSS  Q EARAQ HE YEAR YVN  SHFH
Sbjct: 340 KESGSGQAI---SSSSSGSEAVPGALAETWNSSNSQQEARAQLHESYEARSYVNGNSHFH 399

Query: 301 NYGSFQASSSYALLSGERGEDGDCSGQQRGSISENQAAQRRLAIK 344
           NY SFQA SSYALLSGERGEDGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 400 NYSSFQA-SSYALLSGERGEDGDCSGQQRGSISENQAAQRRLAIK 439

[Close]

BLAST of Sed0019798 vs. NCBI nr
Match: XP_022148721.1 (nuclear transcription factor Y subunit A-1-like [Momordica charantia] >XP_022148722.1 nuclear transcription factor Y subunit A-1-like [Momordica charantia] >XP_022148723.1 nuclear transcription factor Y subunit A-1-like [Momordica charantia] >XP_022148724.1 nuclear transcription factor Y subunit A-1-like [Momordica charantia] >XP_022148725.1 nuclear transcription factor Y subunit A-1-like [Momordica charantia] >XP_022148726.1 nuclear transcription factor Y subunit A-1-like [Momordica charantia])

HSP 1 Score: 547.7 bits (1410), Expect = 6.9e-152
Identity = 296/345 (85.80%), Postives = 308/345 (89.28%), Query Frame = 0


Query: 1   MQSKSKSVNQLESEPPNMQQT-SYSDPWWRSIGYNPISSSAAGGNVSNSPSLECTNGASE 60
           M SKSKSVNQLESEPPNMQQT SYS+PWWRSIGYNPIS  AAGGNVSNS SLECTNGASE
Sbjct: 1   MHSKSKSVNQLESEPPNMQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASE 60

Query: 61  SNDGQSMSNDNLT-EDDDDTTKDSQAPSYGQGQHNSQLAVSTAPTVHGGCLTQPPQLELV 120
           SN+GQSMSND+L  EDDDD TKDSQA SYGQ QHN+Q AVSTAPTVHGGC+TQPPQLELV
Sbjct: 61  SNEGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAVSTAPTVHGGCITQPPQLELV 120

Query: 121 GHSIACASNPYQDPYYAGMMAVYGHQPMVYPPFLGMSHARMALPLEVTQEPVFVNAKQYQ 180
           GH+IACASNPYQDPYY G+M  YGHQP+ YPPFLGM HARMALPLEVTQEPVFVNAKQYQ
Sbjct: 121 GHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ 180

Query: 181 GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEAKSSSSAMKN 240
           GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKK+E  SS S MK+
Sbjct: 181 GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKD 240

Query: 241 KEFGSGQAMPSQSASSSGSEAVPGVLTETWNSSKGQPEARAQFHEEYEARRYVNDRSHFH 300
           KE GSGQA+ S SASSSGSEAVP VL ETWNSS GQ EAR Q HE YEAR YVN  SHF 
Sbjct: 241 KECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGSSHFQ 300

Query: 301 NYGSFQASSSYALLSGERGEDGDCSGQQRGSISENQAAQRRLAIK 344
           NY SFQA SSYAL +GERGEDGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 301 NYSSFQA-SSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK 344

[Close]

BLAST of Sed0019798 vs. ExPASy Swiss-Prot
Match: Q9LXV5 (Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NFYA1 PE=2 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.5e-53
Identity = 141/280 (50.36%), Postives = 179/280 (63.93%), Query Frame = 0


Query: 1   MQSKSKSVNQLE--SEPPNMQQTSYSDPWWRSIGYNPISSSAAGGNVSNSPSLECTNGAS 60
           MQSK    N+ E  +     Q   Y++PWW++  +  +  +   G  SNS SL+C NG S
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-S 60

Query: 61  ESNDGQSMSNDN-LTEDDDDTTKDSQAPSYGQ-----GQHNSQLAVSTAPTVHGGCLTQP 120
           ESND  S S D  L  ++D T KDSQA +  +     G   +  A+S    +H   L QP
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIR-NMHDQPLVQP 120

Query: 121 PQLELVGHSIACASNPYQDPYYAGMMAVYGHQPMVYPPFLGMSHARMALPLEVTQEPVFV 180
           P  ELVGH IAC  NPYQDPYY G+M  YGHQ + + P+LGM   R ALPL++ QEPV+V
Sbjct: 121 P--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYV 180

Query: 181 NAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEAKSS 240
           NAKQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+E ++ 
Sbjct: 181 NAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEAG 240

Query: 241 SSA-MKNKEFGSGQAMPSQSASSSGSEAVPGVLTETWNSS 272
             A  +++E GS       + +SSGSE V     ET NSS
Sbjct: 241 EDAGGRDRERGS-------ATNSSGSEQVETDSNETLNSS 269

[Close]

BLAST of Sed0019798 vs. ExPASy Swiss-Prot
Match: Q945M9 (Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NFYA9 PE=1 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.0e-49
Identity = 153/350 (43.71%), Postives = 188/350 (53.71%), Query Frame = 0


Query: 1   MQSKSKS-VNQLESEPPNMQQTSYS--DPWWR-SIGYNPISSSAAGGNVSNSPSLECTNG 60
           M SKS S  N+++SE      +S +  +PW R +   N  SS  AG   S S +L     
Sbjct: 6   MHSKSDSGGNKVDSEVHGTVSSSINSLNPWHRAAAACNANSSVEAGDKSSKSIAL----- 65

Query: 61  ASESNDGQSMSN--DNLTEDDDDTTKDSQAPSYGQGQHNSQLAVSTAPTVHGGCLTQPPQ 120
           A ESN  +S SN  + + ++   TT    A  Y      S         +H G    PP 
Sbjct: 66  ALESNGSKSPSNRDNTVNKESQVTTSPQSAGDYSDKNQES---------LHHGITQPPPH 125

Query: 121 LELVGHSIACA-SNPYQDPYYAGMMAVYGHQPMVYPPFLGMSHARMALPLEVTQEPVFVN 180
            +LVGH++  A SNPYQDPYYAG+M  YGH P+ + P+ GM H+RM LP E+ QEPVFVN
Sbjct: 126 PQLVGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRMPLPPEMAQEPVFVN 185

Query: 181 AKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEAKSSS 240
           AKQYQ ILRRRQARAKAE+E KLIK RKPYLHESRHQHAMRR RG+GGRFAKK   ++S 
Sbjct: 186 AKQYQAILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRFAKKTNTEASK 245

Query: 241 SAMKNKEFGSGQAMPSQSASSSGSEAVPGVLTETWNSSKGQPEARAQFHEEYEARRYVND 300
              + K  G     PS S S  G         E WN     P+                 
Sbjct: 246 RKAEEKSNGHVTQSPSSSNSDQG---------EAWNGDYRTPQ----------------- 303

Query: 301 RSHFHNYGSFQASSSYALLSGERGEDGDCSGQQRGSISENQAAQRRLAIK 344
                  G    SS+Y     +R E+G+CSGQQ  S+S N  +Q RLAIK
Sbjct: 306 -------GDEMQSSAY-----KRREEGECSGQQWNSLSSNHPSQARLAIK 303

[Close]

BLAST of Sed0019798 vs. ExPASy Swiss-Prot
Match: Q8VY64 (Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NFYA4 PE=1 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 5.4e-22
Identity = 64/135 (47.41%), Postives = 81/135 (60.00%), Query Frame = 0


Query: 128 PYQDPYYAGMMAVYGHQPMVYP----PFLGMSHARMALPLEVTQEPVFVNAKQYQGILRR 187
           PY DPYY  + A   + P  YP      +GM    + L  +  +EPVFVNAKQY GILRR
Sbjct: 54  PYPDPYYRSVFAQQAYLPHPYPGVQLQLMGMQQPGVPLQCDAVEEPVFVNAKQYHGILRR 113

Query: 188 RQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEAKSSSSAMKNKEFGS 247
           RQ+RAK E  N+ IK +KPY+HESRH HA+RR RG GGRF     AK  +   K +E  +
Sbjct: 114 RQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFL---NAKKENGDHKEEEEAT 173

Query: 248 GQAMPSQSASSSGSE 259
                S+++SS  SE
Sbjct: 174 SDENTSEASSSLRSE 185

[Close]

BLAST of Sed0019798 vs. ExPASy Swiss-Prot
Match: Q84JP1 (Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NFYA7 PE=1 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 2.0e-21
Identity = 66/140 (47.14%), Postives = 86/140 (61.43%), Query Frame = 0


Query: 120 HSIACASNPYQDPYYAGMMAVYGHQPM--VYPPFLGMSHARMALPLEVTQEPVFVNAKQY 179
           +S+A    PY DPYY  + A    QP   V+   +G+    + LP +  +EPVFVNAKQY
Sbjct: 51  NSMAPGQYPYPDPYYRSIFAP-PPQPYTGVHLQLMGVQQQGVPLPSDAVEEPVFVNAKQY 110

Query: 180 QGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEAKSSSSAMK 239
            GILRRRQ+RA+ E +NK+IK RKPYLHESRH HA+RR RG GGRF    +         
Sbjct: 111 HGILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNAKKEDEHHEDSS 170

Query: 240 NKEFGSGQAMPSQSASSSGS 258
           ++E  +  A  S  A+SSG+
Sbjct: 171 HEEKSNLSAGKSAMAASSGT 189

[Close]

BLAST of Sed0019798 vs. ExPASy Swiss-Prot
Match: Q9SYH4 (Nuclear transcription factor Y subunit A-5 OS=Arabidopsis thaliana OX=3702 GN=NFYA5 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.9e-20
Identity = 75/206 (36.41%), Postives = 109/206 (52.91%), Query Frame = 0


Query: 63  GQSMSNDNLTEDDDDTTKDSQAPSYGQGQHNSQLAVSTAPTVHGGCLTQPPQLELVGHSI 122
           G S+ N+NL+             + G+   N   +++T+  V    +   P    +  S+
Sbjct: 82  GCSIVNNNLS---------GYIENLGKPIENYTKSITTSSMVSQDSVFPAPTSGQISWSL 141

Query: 123 ACAS----NPYQDPYYAGMMAVYGHQPMVYPPFLGMSHARMALPLEVTQ-EPVFVNAKQY 182
            CA     N +  P YA       H  M     +G+  +R+ LP  + + EP+FVNAKQY
Sbjct: 142 QCAETSHFNGFLAPEYASTPTALPHLEM-----MGLVSSRVPLPHHIQENEPIFVNAKQY 201

Query: 183 QGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEAKSSSSAMK 242
             ILRRR+ RAK E +NKLIK RKPYLHESRH HA++RARGSGGRF    + + SS+++ 
Sbjct: 202 HAILRRRKHRAKLEAQNKLIKCRKPYLHESRHLHALKRARGSGGRFLNTKKLQESSNSLC 261

Query: 243 NKEFGSGQ---AMPSQSASSSGSEAV 261
           + +  +GQ     P    S  GS ++
Sbjct: 262 SSQMANGQNFSMSPHGGGSGIGSSSI 273

[Close]

BLAST of Sed0019798 vs. ExPASy TrEMBL
Match: A0A6J1K375 (Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC111490751 PE=3 SV=1)

HSP 1 Score: 553.9 bits (1426), Expect = 4.7e-154
Identity = 300/346 (86.71%), Postives = 312/346 (90.17%), Query Frame = 0


Query: 1   MQSKSKSVNQLESEPPNMQQT-SYSDPWWRSIGYNPISSSAAGGNVSNSPSLECTNGASE 60
           MQSKSKSVNQ+ESEPPNMQQT SYS+PWWRSIGYNPI  SA GGNVSNSPSLECTNGASE
Sbjct: 1   MQSKSKSVNQVESEPPNMQQTGSYSEPWWRSIGYNPIYPSATGGNVSNSPSLECTNGASE 60

Query: 61  SNDGQSMSNDNLTE--DDDDTTKDSQAPSYGQGQHNSQLAVSTAPTVHGGCLTQPPQLEL 120
           SNDGQSMSN +L E  DDDDTTK++QA SYGQ QHN+Q AVSTAP VHGGC+TQPPQLEL
Sbjct: 61  SNDGQSMSNADLNEDDDDDDTTKETQAASYGQSQHNNQHAVSTAPRVHGGCITQPPQLEL 120

Query: 121 VGHSIACASNPYQDPYYAGMMAVYGHQPMVYPPFLGMSHARMALPLEVTQEPVFVNAKQY 180
           VGHSIACASN YQDPYYAG+MA YGHQPM YPPF+GM HARMALPLEV QEPVFVNAKQY
Sbjct: 121 VGHSIACASNQYQDPYYAGLMAAYGHQPMGYPPFIGMPHARMALPLEVAQEPVFVNAKQY 180

Query: 181 QGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEAKSSSSAMK 240
           QGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARG+GGRFAKKNEAKS SS MK
Sbjct: 181 QGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGTGGRFAKKNEAKSLSSTMK 240

Query: 241 NKEFGSGQAMPSQSASSSGSEAVPGVLTETWNSSKGQPEARAQFHEEYEARRYVNDRSHF 300
           NKE GSGQA+   S+SSSGSEAVPG LTETWNSS  Q EARAQ HE YEAR YVN  SHF
Sbjct: 241 NKESGSGQAI---SSSSSGSEAVPGALTETWNSSNSQQEARAQLHESYEARSYVNGNSHF 300

Query: 301 HNYGSFQASSSYALLSGERGEDGDCSGQQRGSISENQAAQRRLAIK 344
           HNY SFQA SSYALLSGERGEDGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 301 HNYSSFQA-SSYALLSGERGEDGDCSGQQRGSISENQAAQRRLAIK 342

[Close]

BLAST of Sed0019798 vs. ExPASy TrEMBL
Match: A0A6J1H3M1 (Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC111459713 PE=3 SV=1)

HSP 1 Score: 548.5 bits (1412), Expect = 2.0e-152
Identity = 299/345 (86.67%), Postives = 312/345 (90.43%), Query Frame = 0


Query: 1   MQSKSKSVNQLESEPPNMQQT-SYSDPWWRSIGYNPISSSAAGGNVSNSPSLECTNGASE 60
           MQSKSKSVNQ+ESEPPNMQQT SYS+PWWRSIGYNPIS SA GGNVSNSPSLECTNGASE
Sbjct: 1   MQSKSKSVNQVESEPPNMQQTGSYSEPWWRSIGYNPISPSATGGNVSNSPSLECTNGASE 60

Query: 61  SNDGQSMSNDNLTE-DDDDTTKDSQAPSYGQGQHNSQLAVSTAPTVHGGCLTQPPQLELV 120
           SND QSMSN +L E DDDDTTK++QA SYGQGQHN+Q AVSTAP VHGGC+TQPPQLELV
Sbjct: 61  SND-QSMSNADLNEDDDDDTTKETQAASYGQGQHNNQHAVSTAPRVHGGCITQPPQLELV 120

Query: 121 GHSIACASNPYQDPYYAGMMAVYGHQPMVYPPFLGMSHARMALPLEVTQEPVFVNAKQYQ 180
           GHSIACASN YQDPYYAG+MA YGHQPM YPPF+GM HARMALPLEV QEPVFVNAKQYQ
Sbjct: 121 GHSIACASNQYQDPYYAGLMAAYGHQPMGYPPFIGMPHARMALPLEVAQEPVFVNAKQYQ 180

Query: 181 GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEAKSSSSAMKN 240
           GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARG+GGRFAKKNEAKS SS MK+
Sbjct: 181 GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGTGGRFAKKNEAKSLSSTMKS 240

Query: 241 KEFGSGQAMPSQSASSSGSEAVPGVLTETWNSSKGQPEARAQFHEEYEARRYVNDRSHFH 300
           KE GSGQA+   S+SSSGSEAVPG L ETWNSS  Q EARAQ HE YEAR YVN  SHFH
Sbjct: 241 KESGSGQAI---SSSSSGSEAVPGALAETWNSSNSQQEARAQLHESYEARSYVNGNSHFH 300

Query: 301 NYGSFQASSSYALLSGERGEDGDCSGQQRGSISENQAAQRRLAIK 344
           NY SFQA SSYALLSGERGEDGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 301 NYSSFQA-SSYALLSGERGEDGDCSGQQRGSISENQAAQRRLAIK 340

[Close]

BLAST of Sed0019798 vs. ExPASy TrEMBL
Match: A0A6J1D691 (Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC111017316 PE=3 SV=1)

HSP 1 Score: 547.7 bits (1410), Expect = 3.4e-152
Identity = 296/345 (85.80%), Postives = 308/345 (89.28%), Query Frame = 0


Query: 1   MQSKSKSVNQLESEPPNMQQT-SYSDPWWRSIGYNPISSSAAGGNVSNSPSLECTNGASE 60
           M SKSKSVNQLESEPPNMQQT SYS+PWWRSIGYNPIS  AAGGNVSNS SLECTNGASE
Sbjct: 1   MHSKSKSVNQLESEPPNMQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASE 60

Query: 61  SNDGQSMSNDNLT-EDDDDTTKDSQAPSYGQGQHNSQLAVSTAPTVHGGCLTQPPQLELV 120
           SN+GQSMSND+L  EDDDD TKDSQA SYGQ QHN+Q AVSTAPTVHGGC+TQPPQLELV
Sbjct: 61  SNEGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAVSTAPTVHGGCITQPPQLELV 120

Query: 121 GHSIACASNPYQDPYYAGMMAVYGHQPMVYPPFLGMSHARMALPLEVTQEPVFVNAKQYQ 180
           GH+IACASNPYQDPYY G+M  YGHQP+ YPPFLGM HARMALPLEVTQEPVFVNAKQYQ
Sbjct: 121 GHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ 180

Query: 181 GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEAKSSSSAMKN 240
           GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKK+E  SS S MK+
Sbjct: 181 GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKD 240

Query: 241 KEFGSGQAMPSQSASSSGSEAVPGVLTETWNSSKGQPEARAQFHEEYEARRYVNDRSHFH 300
           KE GSGQA+ S SASSSGSEAVP VL ETWNSS GQ EAR Q HE YEAR YVN  SHF 
Sbjct: 241 KECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGSSHFQ 300

Query: 301 NYGSFQASSSYALLSGERGEDGDCSGQQRGSISENQAAQRRLAIK 344
           NY SFQA SSYAL +GERGEDGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 301 NYSSFQA-SSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK 344

[Close]

BLAST of Sed0019798 vs. ExPASy TrEMBL
Match: A0A6J1FTP1 (Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC111448699 PE=3 SV=1)

HSP 1 Score: 525.8 bits (1353), Expect = 1.4e-145
Identity = 289/345 (83.77%), Postives = 300/345 (86.96%), Query Frame = 0


Query: 1   MQSKSKSVNQLESEPPNMQQT-SYSDPWWRSIGYNPISSSAAGGNVSNSPSLECTNGASE 60
           MQSK +SVNQLESEPPNMQQT SYS+PWWRSIGYN IS  AAGGN+SNS SLEC NGASE
Sbjct: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNQISPPAAGGNLSNSTSLECPNGASE 60

Query: 61  SNDGQSMSNDNLTE-DDDDTTKDSQAPSYGQGQHNSQLAVSTAPTVHGGCLTQPPQLELV 120
           SNDG SMSND+L E DDDDTTKDS A SYGQ Q+NSQ AVS APTVHGGC+TQPPQLELV
Sbjct: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLELV 120

Query: 121 GHSIACASNPYQDPYYAGMMAVYGHQPMVYPPFLGMSHARMALPLEVTQEPVFVNAKQYQ 180
           GHSIACASN YQDPYYAG+MA YGHQP  YPPFLGM HARMALPLEVTQEPVFVNAKQYQ
Sbjct: 121 GHSIACASNLYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ 180

Query: 181 GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEAKSSSSAMKN 240
           GILRRRQARAKAEVENKLIK+RKPYLHESRHQHAMRRARGSGGRFAKKNE  SSSS MKN
Sbjct: 181 GILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKN 240

Query: 241 KEFGSGQAMPSQSASSSGSEAVPGVLTETWNSSKGQPEARAQFHEEYEARRYVNDRSHFH 300
           K+ GSGQA  S SA SSGSEA P  L ETWNSS GQ EAR Q HE Y+AR YVN    FH
Sbjct: 241 KDSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYKARSYVNGSEQFH 300

Query: 301 NYGSFQASSSYALLSGERGEDGDCSGQQRGSISENQAAQRRLAIK 344
           NY SFQA SSYAL SGERG+DGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 301 NYSSFQA-SSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 343

[Close]

BLAST of Sed0019798 vs. ExPASy TrEMBL
Match: A0A6J1JHB5 (Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC111484375 PE=3 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 1.8e-145
Identity = 289/345 (83.77%), Postives = 300/345 (86.96%), Query Frame = 0


Query: 1   MQSKSKSVNQLESEPPNMQQT-SYSDPWWRSIGYNPISSSAAGGNVSNSPSLECTNGASE 60
           MQSK +SVNQLESEPPNMQQT SYS+PWWRSIGYN ISS AAGGN+SNS SLEC NGASE
Sbjct: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISSPAAGGNLSNSTSLECPNGASE 60

Query: 61  SNDGQSMSNDNLTE-DDDDTTKDSQAPSYGQGQHNSQLAVSTAPTVHGGCLTQPPQLELV 120
           SNDG SMSND+L E DDDDTTKDS A SYGQ Q+N Q AVS APTVHGGC+TQPPQLELV
Sbjct: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNCQHAVSAAPTVHGGCITQPPQLELV 120

Query: 121 GHSIACASNPYQDPYYAGMMAVYGHQPMVYPPFLGMSHARMALPLEVTQEPVFVNAKQYQ 180
           GHSIACASN YQDPYYAG+MA YGHQP  YPPFLGM HARMALPLEVTQEPVFVNAKQYQ
Sbjct: 121 GHSIACASNLYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ 180

Query: 181 GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEAKSSSSAMKN 240
           GILRRRQARAKAEVENKLIK+RKPYLHESRHQHAMRRARGSGGRFAKKNE  SSSS +KN
Sbjct: 181 GILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTVKN 240

Query: 241 KEFGSGQAMPSQSASSSGSEAVPGVLTETWNSSKGQPEARAQFHEEYEARRYVNDRSHFH 300
           K+ GSGQA  S SA SSGSEA P  L ETWNSS GQ EAR Q HE YEAR YVN    FH
Sbjct: 241 KDSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYVNGSGQFH 300

Query: 301 NYGSFQASSSYALLSGERGEDGDCSGQQRGSISENQAAQRRLAIK 344
           NY SFQA SSYAL SGERG+DGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 301 NYSSFQA-SSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 343

[Close]

BLAST of Sed0019798 vs. TAIR 10
Match: AT5G12840.2 (nuclear factor Y, subunit A1 )

HSP 1 Score: 212.2 bits (539), Expect = 6.4e-55
Identity = 142/279 (50.90%), Postives = 178/279 (63.80%), Query Frame = 0


Query: 1   MQSKSKSVNQLE--SEPPNMQQTSYSDPWWRSIGYNPISSSAAGGNVSNSPSLECTNGAS 60
           MQSK    N+ E  +     Q   Y++PWW++  +  +  +   G  SNS SL+C NG S
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-S 60

Query: 61  ESNDGQSMSNDN-LTEDDDDTTKDSQAP----SYGQGQHNSQLAVSTAPTVHGGCLTQPP 120
           ESND  S S D  L  ++D T KDSQA     S   G   +  A+S    +H   L QPP
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSDNHGMEGNDPALSIR-NMHDQPLVQPP 120

Query: 121 QLELVGHSIACASNPYQDPYYAGMMAVYGHQPMVYPPFLGMSHARMALPLEVTQEPVFVN 180
             ELVGH IAC  NPYQDPYY G+M  YGHQ + + P+LGM   R ALPL++ QEPV+VN
Sbjct: 121 --ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVN 180

Query: 181 AKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEAKSSS 240
           AKQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+E ++  
Sbjct: 181 AKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEAGE 240

Query: 241 SA-MKNKEFGSGQAMPSQSASSSGSEAVPGVLTETWNSS 272
            A  +++E GS       + +SSGSE V     ET NSS
Sbjct: 241 DAGGRDRERGS-------ATNSSGSEQVETDSNETLNSS 268

[Close]

BLAST of Sed0019798 vs. TAIR 10
Match: AT5G12840.4 (nuclear factor Y, subunit A1 )

HSP 1 Score: 212.2 bits (539), Expect = 6.4e-55
Identity = 142/279 (50.90%), Postives = 178/279 (63.80%), Query Frame = 0


Query: 1   MQSKSKSVNQLE--SEPPNMQQTSYSDPWWRSIGYNPISSSAAGGNVSNSPSLECTNGAS 60
           MQSK    N+ E  +     Q   Y++PWW++  +  +  +   G  SNS SL+C NG S
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-S 60

Query: 61  ESNDGQSMSNDN-LTEDDDDTTKDSQAP----SYGQGQHNSQLAVSTAPTVHGGCLTQPP 120
           ESND  S S D  L  ++D T KDSQA     S   G   +  A+S    +H   L QPP
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSDNHGMEGNDPALSIR-NMHDQPLVQPP 120

Query: 121 QLELVGHSIACASNPYQDPYYAGMMAVYGHQPMVYPPFLGMSHARMALPLEVTQEPVFVN 180
             ELVGH IAC  NPYQDPYY G+M  YGHQ + + P+LGM   R ALPL++ QEPV+VN
Sbjct: 121 --ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVN 180

Query: 181 AKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEAKSSS 240
           AKQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+E ++  
Sbjct: 181 AKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEAGE 240

Query: 241 SA-MKNKEFGSGQAMPSQSASSSGSEAVPGVLTETWNSS 272
            A  +++E GS       + +SSGSE V     ET NSS
Sbjct: 241 DAGGRDRERGS-------ATNSSGSEQVETDSNETLNSS 268

[Close]

BLAST of Sed0019798 vs. TAIR 10
Match: AT5G12840.1 (nuclear factor Y, subunit A1 )

HSP 1 Score: 211.5 bits (537), Expect = 1.1e-54
Identity = 141/280 (50.36%), Postives = 179/280 (63.93%), Query Frame = 0


Query: 1   MQSKSKSVNQLE--SEPPNMQQTSYSDPWWRSIGYNPISSSAAGGNVSNSPSLECTNGAS 60
           MQSK    N+ E  +     Q   Y++PWW++  +  +  +   G  SNS SL+C NG S
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-S 60

Query: 61  ESNDGQSMSNDN-LTEDDDDTTKDSQAPSYGQ-----GQHNSQLAVSTAPTVHGGCLTQP 120
           ESND  S S D  L  ++D T KDSQA +  +     G   +  A+S    +H   L QP
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIR-NMHDQPLVQP 120

Query: 121 PQLELVGHSIACASNPYQDPYYAGMMAVYGHQPMVYPPFLGMSHARMALPLEVTQEPVFV 180
           P  ELVGH IAC  NPYQDPYY G+M  YGHQ + + P+LGM   R ALPL++ QEPV+V
Sbjct: 121 P--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYV 180

Query: 181 NAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEAKSS 240
           NAKQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+E ++ 
Sbjct: 181 NAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEAG 240

Query: 241 SSA-MKNKEFGSGQAMPSQSASSSGSEAVPGVLTETWNSS 272
             A  +++E GS       + +SSGSE V     ET NSS
Sbjct: 241 EDAGGRDRERGS-------ATNSSGSEQVETDSNETLNSS 269

[Close]

BLAST of Sed0019798 vs. TAIR 10
Match: AT5G12840.3 (nuclear factor Y, subunit A1 )

HSP 1 Score: 211.5 bits (537), Expect = 1.1e-54
Identity = 141/280 (50.36%), Postives = 179/280 (63.93%), Query Frame = 0


Query: 1   MQSKSKSVNQLE--SEPPNMQQTSYSDPWWRSIGYNPISSSAAGGNVSNSPSLECTNGAS 60
           MQSK    N+ E  +     Q   Y++PWW++  +  +  +   G  SNS SL+C NG S
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-S 60

Query: 61  ESNDGQSMSNDN-LTEDDDDTTKDSQAPSYGQ-----GQHNSQLAVSTAPTVHGGCLTQP 120
           ESND  S S D  L  ++D T KDSQA +  +     G   +  A+S    +H   L QP
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIR-NMHDQPLVQP 120

Query: 121 PQLELVGHSIACASNPYQDPYYAGMMAVYGHQPMVYPPFLGMSHARMALPLEVTQEPVFV 180
           P  ELVGH IAC  NPYQDPYY G+M  YGHQ + + P+LGM   R ALPL++ QEPV+V
Sbjct: 121 P--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYV 180

Query: 181 NAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEAKSS 240
           NAKQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+E ++ 
Sbjct: 181 NAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEAG 240

Query: 241 SSA-MKNKEFGSGQAMPSQSASSSGSEAVPGVLTETWNSS 272
             A  +++E GS       + +SSGSE V     ET NSS
Sbjct: 241 EDAGGRDRERGS-------ATNSSGSEQVETDSNETLNSS 269

[Close]

BLAST of Sed0019798 vs. TAIR 10
Match: AT3G20910.1 (nuclear factor Y, subunit A9 )

HSP 1 Score: 198.7 bits (504), Expect = 7.4e-51
Identity = 153/350 (43.71%), Postives = 188/350 (53.71%), Query Frame = 0


Query: 1   MQSKSKS-VNQLESEPPNMQQTSYS--DPWWR-SIGYNPISSSAAGGNVSNSPSLECTNG 60
           M SKS S  N+++SE      +S +  +PW R +   N  SS  AG   S S +L     
Sbjct: 6   MHSKSDSGGNKVDSEVHGTVSSSINSLNPWHRAAAACNANSSVEAGDKSSKSIAL----- 65

Query: 61  ASESNDGQSMSN--DNLTEDDDDTTKDSQAPSYGQGQHNSQLAVSTAPTVHGGCLTQPPQ 120
           A ESN  +S SN  + + ++   TT    A  Y      S         +H G    PP 
Sbjct: 66  ALESNGSKSPSNRDNTVNKESQVTTSPQSAGDYSDKNQES---------LHHGITQPPPH 125

Query: 121 LELVGHSIACA-SNPYQDPYYAGMMAVYGHQPMVYPPFLGMSHARMALPLEVTQEPVFVN 180
            +LVGH++  A SNPYQDPYYAG+M  YGH P+ + P+ GM H+RM LP E+ QEPVFVN
Sbjct: 126 PQLVGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRMPLPPEMAQEPVFVN 185

Query: 181 AKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEAKSSS 240
           AKQYQ ILRRRQARAKAE+E KLIK RKPYLHESRHQHAMRR RG+GGRFAKK   ++S 
Sbjct: 186 AKQYQAILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRFAKKTNTEASK 245

Query: 241 SAMKNKEFGSGQAMPSQSASSSGSEAVPGVLTETWNSSKGQPEARAQFHEEYEARRYVND 300
              + K  G     PS S S  G         E WN     P+                 
Sbjct: 246 RKAEEKSNGHVTQSPSSSNSDQG---------EAWNGDYRTPQ----------------- 303

Query: 301 RSHFHNYGSFQASSSYALLSGERGEDGDCSGQQRGSISENQAAQRRLAIK 344
                  G    SS+Y     +R E+G+CSGQQ  S+S N  +Q RLAIK
Sbjct: 306 -------GDEMQSSAY-----KRREEGECSGQQWNSLSSNHPSQARLAIK 303

The following BLAST results are available for this feature:

BLAST of Sed0019798 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022995109.1	9.7e-154	86.71	nuclear transcription factor Y subunit A-1-like [Cucurbita maxima] >XP_022995110...	[more]
XP_023533872.1	2.8e-153	86.42	nuclear transcription factor Y subunit A-1-like [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_022958505.1	4.1e-152	86.67	nuclear transcription factor Y subunit A-1-like [Cucurbita moschata] >XP_0229585...	[more]
KAG6605918.1	4.1e-152	86.67	Nuclear transcription factor Y subunit A-1, partial [Cucurbita argyrosperma subs...	[more]
XP_022148721.1	6.9e-152	85.80	nuclear transcription factor Y subunit A-1-like [Momordica charantia] >XP_022148...	[more]

BLAST of Sed0019798 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LXV5	1.5e-53	50.36	Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q945M9	1.0e-49	43.71	Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q8VY64	5.4e-22	47.41	Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q84JP1	2.0e-21	47.14	Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9SYH4	2.9e-20	36.41	Nuclear transcription factor Y subunit A-5 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of Sed0019798 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K375	4.7e-154	86.71	Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC1114907...	[more]
A0A6J1H3M1	2.0e-152	86.67	Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1D691	3.4e-152	85.80	Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1FTP1	1.4e-145	83.77	Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1JHB5	1.8e-145	83.77	Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC1114843...	[more]

BLAST of Sed0019798 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12840.2	6.4e-55	50.90	nuclear factor Y, subunit A1	[more]
AT5G12840.4	6.4e-55	50.90	nuclear factor Y, subunit A1	[more]
AT5G12840.1	1.1e-54	50.36	nuclear factor Y, subunit A1	[more]
AT5G12840.3	1.1e-54	50.36	nuclear factor Y, subunit A1	[more]
AT3G20910.1	7.4e-51	43.71	nuclear factor Y, subunit A9	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001289	Nuclear transcription factor Y subunit A	PRINTS	PR00616	CCAATSUBUNTB	coord: 169..191 score: 74.15 coord: 200..223 score: 81.94
IPR001289	Nuclear transcription factor Y subunit A	SMART	SM00521	cbf3	coord: 165..226 e-value: 2.3E-35 score: 133.5
IPR001289	Nuclear transcription factor Y subunit A	PFAM	PF02045	CBFB_NFYA	coord: 168..223 e-value: 1.9E-26 score: 92.4
IPR001289	Nuclear transcription factor Y subunit A	PANTHER	PTHR12632	TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED	coord: 30..334
IPR001289	Nuclear transcription factor Y subunit A	PROSITE	PS51152	NFYA_HAP2_2	coord: 166..226 score: 36.156738
None	No IPR available	GENE3D	6.10.250.2430		coord: 166..228 e-value: 3.0E-30 score: 106.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..68
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 226..261
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 312..343
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..95
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..261
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..220
None	No IPR available	PANTHER	PTHR12632:SF59	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-9	coord: 30..334
IPR018362	CCAAT-binding factor, conserved site	PROSITE	PS00686	NFYA_HAP2_1	coord: 171..191

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0019798.1	Sed0019798.1	mRNA
Sed0019798.2	Sed0019798.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity