Sed0019738 (gene) Chayote v1

Overview


Name	Sed0019738
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein BPS1, chloroplastic-like
Location	LG09: 37682943 .. 37684365 (+)
RNA-Seq Expression	Sed0019738
Synteny	Sed0019738

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCAACATTAACGCTGATCGTCTCCTTTTGAATCTTCTTTAGCCGACCTTATATATAAACACTCAAAACCCCATTTCAGTTCTTCAAAATTCCATTTGTACTTTTTATGGCACTTTTACTTCAATCCATTCACAAGCTCTGTTCCAACAACCGCCACAGACACAAGCCTTCACCCTCTGTTTCTCATCTCCAATCCTTCATCTCCATAATCTCCTCTTCCCTCAACCAAATCCCATCGATTTCCGGCTCGAACTCGCTGTCGTTACAATGGCTTCTTCATCTTCTTCAAGCTCTCCCAACCCTCCATCAGGCCTTCGCGAAATTGGCCGCCGATTTGGATCATCCTGTTGCGAAATGGGGCGGCGATTTGGTTGATGGGTATTTGAATTACAGTCTGAATTTGCTTGATTTGCTCAATTCCGTGACTTTTTCGCTGACCCAATTGGCGCAATCGCGGGTTTTGCTCGCTTGCGCGTTGAATTCAGTGGCGGTTGCGAAGCCGATTGTGTTGATGAGGAGTTACAGAGGATTTGAAAACAGGGGAGTTTTGGGTGGTCGGAGAAAGGGCTGCTCCGGCGAGGAGTCGGCGATTTGGGAAGCTTTGGCGATAATGGAGGGGATTGGGTATTGGGTTTGTGGGGTTTTGATTTCTGGTTGTGAGGGGGATTCCGCGGCGTATTTCGAGATGAGGAATTTGGCAGCCGGCGTGGCGGTTCCGGCCTTCGCGGTGGTGGATTCAGTTGTGTTGAAGGTGGTTTCCGGGGAGGGGAGTGTGCCCGTAGAGGTGAAAGAGGTGAACGTTGCGGTGGCCGGAGTTGTTGGCGGCAGCGGAGAGGCGGCGGCGGCGGAGATGAGGAGGAGATTGGGAAGATTGGAGATGGCGGCGGAGAAATTGAAGAAGGAAGTGGATGGAACATTCTCGGAGGTTCTTGACGGAAGAAGTTGTTTGCTTGATACTTTTAGACAACAAAAATAAATTTGAGGATTAGTTTGTTTCAATTCTATAAAGAATAGAGAGAAGTTTAGGTGCTAGCGGGATAGTAAATATTTATTTCTATCCCGCCATATTTCTATACATTCAAGTAACATCTTTTCATTGTATTAATAATTTTCTTTTTTAAAATATAATTATTTTAAAGAATAAAATTATTGGTCCAATGAAAAGATGTCACGTGCCTGAATTGTAACAAATATTTGTTATTGAACTAGCACCCAAACTTCCCTCTAAAGAATGTAATGTTGATTTACCTTGTTTTTGTTTGATTTTTTTTTCCTTATTTGTTTGGAATTGTATAATGAATGTAATGTGGGAGACCAAAGATTTTGTATCATAAAATTATAAAATTGTAATATATGATGCTAACTAATCCCACAAGTTTCCTAAGAATTACTTTCATTCAAACAATTTGAAAAATGTGAAGAC

mRNA sequence

GTCAACATTAACGCTGATCGTCTCCTTTTGAATCTTCTTTAGCCGACCTTATATATAAACACTCAAAACCCCATTTCAGTTCTTCAAAATTCCATTTGTACTTTTTATGGCACTTTTACTTCAATCCATTCACAAGCTCTGTTCCAACAACCGCCACAGACACAAGCCTTCACCCTCTGTTTCTCATCTCCAATCCTTCATCTCCATAATCTCCTCTTCCCTCAACCAAATCCCATCGATTTCCGGCTCGAACTCGCTGTCGTTACAATGGCTTCTTCATCTTCTTCAAGCTCTCCCAACCCTCCATCAGGCCTTCGCGAAATTGGCCGCCGATTTGGATCATCCTGTTGCGAAATGGGGCGGCGATTTGGTTGATGGGTATTTGAATTACAGTCTGAATTTGCTTGATTTGCTCAATTCCGTGACTTTTTCGCTGACCCAATTGGCGCAATCGCGGGTTTTGCTCGCTTGCGCGTTGAATTCAGTGGCGGTTGCGAAGCCGATTGTGTTGATGAGGAGTTACAGAGGATTTGAAAACAGGGGAGTTTTGGGTGGTCGGAGAAAGGGCTGCTCCGGCGAGGAGTCGGCGATTTGGGAAGCTTTGGCGATAATGGAGGGGATTGGGTATTGGGTTTGTGGGGTTTTGATTTCTGGTTGTGAGGGGGATTCCGCGGCGTATTTCGAGATGAGGAATTTGGCAGCCGGCGTGGCGGTTCCGGCCTTCGCGGTGGTGGATTCAGTTGTGTTGAAGGTGGTTTCCGGGGAGGGGAGTGTGCCCGTAGAGGTGAAAGAGGTGAACGTTGCGGTGGCCGGAGTTGTTGGCGGCAGCGGAGAGGCGGCGGCGGCGGAGATGAGGAGGAGATTGGGAAGATTGGAGATGGCGGCGGAGAAATTGAAGAAGGAAGTGGATGGAACATTCTCGGAGGTTCTTGACGGAAGAAGTTGTTTGCTTGATACTTTTAGACAACAAAAATAAATTTGAGGATTAGTTTGTTTCAATTCTATAAAGAATAGAGAGAAGTTTAGGTGCTAGCGGGATAGTAAATATTTATTTCTATCCCGCCATATTTCTATACATTCAAGTAACATCTTTTCATTGTATTAATAATTTTCTTTTTTAAAATATAATTATTTTAAAGAATAAAATTATTGGTCCAATGAAAAGATGTCACGTGCCTGAATTGTAACAAATATTTGTTATTGAACTAGCACCCAAACTTCCCTCTAAAGAATGTAATGTTGATTTACCTTGTTTTTGTTTGATTTTTTTTTCCTTATTTGTTTGGAATTGTATAATGAATGTAATGTGGGAGACCAAAGATTTTGTATCATAAAATTATAAAATTGTAATATATGATGCTAACTAATCCCACAAGTTTCCTAAGAATTACTTTCATTCAAACAATTTGAAAAATGTGAAGAC

Coding sequence (CDS)

ATGGCACTTTTACTTCAATCCATTCACAAGCTCTGTTCCAACAACCGCCACAGACACAAGCCTTCACCCTCTGTTTCTCATCTCCAATCCTTCATCTCCATAATCTCCTCTTCCCTCAACCAAATCCCATCGATTTCCGGCTCGAACTCGCTGTCGTTACAATGGCTTCTTCATCTTCTTCAAGCTCTCCCAACCCTCCATCAGGCCTTCGCGAAATTGGCCGCCGATTTGGATCATCCTGTTGCGAAATGGGGCGGCGATTTGGTTGATGGGTATTTGAATTACAGTCTGAATTTGCTTGATTTGCTCAATTCCGTGACTTTTTCGCTGACCCAATTGGCGCAATCGCGGGTTTTGCTCGCTTGCGCGTTGAATTCAGTGGCGGTTGCGAAGCCGATTGTGTTGATGAGGAGTTACAGAGGATTTGAAAACAGGGGAGTTTTGGGTGGTCGGAGAAAGGGCTGCTCCGGCGAGGAGTCGGCGATTTGGGAAGCTTTGGCGATAATGGAGGGGATTGGGTATTGGGTTTGTGGGGTTTTGATTTCTGGTTGTGAGGGGGATTCCGCGGCGTATTTCGAGATGAGGAATTTGGCAGCCGGCGTGGCGGTTCCGGCCTTCGCGGTGGTGGATTCAGTTGTGTTGAAGGTGGTTTCCGGGGAGGGGAGTGTGCCCGTAGAGGTGAAAGAGGTGAACGTTGCGGTGGCCGGAGTTGTTGGCGGCAGCGGAGAGGCGGCGGCGGCGGAGATGAGGAGGAGATTGGGAAGATTGGAGATGGCGGCGGAGAAATTGAAGAAGGAAGTGGATGGAACATTCTCGGAGGTTCTTGACGGAAGAAGTTGTTTGCTTGATACTTTTAGACAACAAAAATAA

Protein sequence

MALLLQSIHKLCSNNRHRHKPSPSVSHLQSFISIISSSLNQIPSISGSNSLSLQWLLHLLQALPTLHQAFAKLAADLDHPVAKWGGDLVDGYLNYSLNLLDLLNSVTFSLTQLAQSRVLLACALNSVAVAKPIVLMRSYRGFENRGVLGGRRKGCSGEESAIWEALAIMEGIGYWVCGVLISGCEGDSAAYFEMRNLAAGVAVPAFAVVDSVVLKVVSGEGSVPVEVKEVNVAVAGVVGGSGEAAAAEMRRRLGRLEMAAEKLKKEVDGTFSEVLDGRSCLLDTFRQQK

Homology

[Close]

BLAST of Sed0019738 vs. NCBI nr
Match: XP_038896303.1 (protein BPS1, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 325.1 bits (832), Expect = 6.2e-85
Identity = 189/304 (62.17%), Postives = 223/304 (73.36%), Query Frame = 0


Query: 1   MALLLQSIHKLCS---NNRHRH--KPSPSVSHLQSFISIISSSLNQ-IPSISGSNSLSLQ 60
           M LLLQ+ +KLCS   N+ HR   K S SVS LQ+F   +SS LNQ + S S   SLS +
Sbjct: 1   MPLLLQTFNKLCSKLDNHHHRRGCKSSFSVSRLQAFEDDVSSCLNQLLLSTSDLKSLSFR 60

Query: 61  WLLHLLQAL-PTLHQAFAKLAADLDHPVAKWGGDLVDGYLNYSLNLLDLLNSVTFSLTQL 120
           WLL LLQ L P++HQAFAKL  DL++PV KWG DLVDGYLNYSLNLLDLLNS++FSL QL
Sbjct: 61  WLLQLLQGLIPSIHQAFAKLVVDLEYPVGKWGADLVDGYLNYSLNLLDLLNSISFSLAQL 120

Query: 121 AQSRVLLACALN--------SVAVAKPIVLMRSYRGFENRGVLGGRRKGCSGEESAIWEA 180
             SRV L+ AL+        +V+  KPIVL RS+ G E RG +  ++KGCS EE AI +A
Sbjct: 121 RNSRVSLSYALSLIQSSPLMAVSRLKPIVLKRSFEGSEIRGNVKDQKKGCSDEEWAIEKA 180

Query: 181 LAIMEGIGYWVCGVLISGCEGDSAAYFEMRNLAAGVAVPAFAVVDSVVLKVVSGEGSVPV 240
           LA MEG+GYWVCG+++SGCEGDS AYFEMR LAAGV VPAF V+DSV+  VVS +GSV  
Sbjct: 181 LATMEGLGYWVCGIVLSGCEGDSTAYFEMRRLAAGVTVPAFKVLDSVIFAVVSAKGSVLE 240

Query: 241 EVKEVNVAVAGVVGGSGEAAAAEMRRRLGRLEMAAEKLKKEVDGTFSEVLDGRSCLLDTF 290
           EV+EVN AVA ++GG G  A  EMRRRLGRLE   + + KEVDG FSEVLDGRS LLD F
Sbjct: 241 EVEEVNAAVAKIIGGGGGEAVEEMRRRLGRLEKTVDGMGKEVDGRFSEVLDGRSRLLDVF 300

[Close]

BLAST of Sed0019738 vs. NCBI nr
Match: KAG6593278.1 (Protein BPS1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 324.3 bits (830), Expect = 1.1e-84
Identity = 198/307 (64.50%), Postives = 224/307 (72.96%), Query Frame = 0


Query: 1   MALLLQSIHKLCS------NNRHRHKPSPSVSHLQSFISIISSSLNQ-IPSISGSNSLSL 60
           M LLLQS +K CS      ++RH ++ S SVS LQ+F + +SS LNQ + S S S +LS 
Sbjct: 1   MLLLLQSFNKHCSKFYNHHHSRHGNRASFSVSCLQAFDAEVSSCLNQLLLSSSDSTTLSF 60

Query: 61  QWLLHLLQALPTLHQAFAKLAADLDHPVAKWGGDLVDGYLNYSLNLLDLLNSVTFSLTQL 120
            WLL LLQALP LHQAFAKL  DLD PVAKWG DLVDGYLNYSLNLLDLLNSV+FSL+QL
Sbjct: 61  HWLLQLLQALPVLHQAFAKLVVDLDCPVAKWGADLVDGYLNYSLNLLDLLNSVSFSLSQL 120

Query: 121 AQSRVLLACALN--------SVAVAKPIVLMRSYRGFENRGVLGGRRKGCSGEESAIWEA 180
             SR+ LA AL+        +VA  KPIV+ R++ G ENRG++  R+KG SGEE AI  A
Sbjct: 121 GNSRLSLAYALSLVRSSPLMAVARLKPIVMKRNFMGLENRGIVVDRKKGYSGEEWAIERA 180

Query: 181 LAIMEGIGYWVCGVLISGCEGDSAAYFEMRNLAAGVAVPAFAVVDSVVLKVVSGEGSVPV 240
           LA M GIGYWVCGV+ISGCEGDS AYFEMR LAAGV VPAF  +DSVV K    +G+VP 
Sbjct: 181 LATMMGIGYWVCGVVISGCEGDSTAYFEMRRLAAGVTVPAFKELDSVVSK----KGNVPE 240

Query: 241 EVKEVNVA---VAGVVGGSGEAAAAEMRRRLGRLEMAAEKLKKEVDGTFSEVLDGRSCLL 290
           EVKEVN A   V G  GG GE AA EMRRRL RLE A E+L KEVDG FSEVLDGRS LL
Sbjct: 241 EVKEVNCAAKEVIGSGGGDGE-AAEEMRRRLERLEKAVERLVKEVDGRFSEVLDGRSRLL 300

[Close]

BLAST of Sed0019738 vs. NCBI nr
Match: XP_022960422.1 (protein BPS1, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 322.4 bits (825), Expect = 4.0e-84
Identity = 197/307 (64.17%), Postives = 223/307 (72.64%), Query Frame = 0


Query: 1   MALLLQSIHKLCS------NNRHRHKPSPSVSHLQSFISIISSSLNQ-IPSISGSNSLSL 60
           M LLLQS +K CS      ++RH ++ S SVS LQ+F + +SS LNQ + S S S +LS 
Sbjct: 1   MLLLLQSFNKHCSKFYNHHHSRHGNRASFSVSCLQAFDAEVSSCLNQLLLSSSDSTTLSF 60

Query: 61  QWLLHLLQALPTLHQAFAKLAADLDHPVAKWGGDLVDGYLNYSLNLLDLLNSVTFSLTQL 120
            WLL LLQALP LHQAFAKL  DLD PVAKWG DLVDGYLNYSLNLLDLLNSV+FSL+QL
Sbjct: 61  HWLLQLLQALPVLHQAFAKLVVDLDCPVAKWGADLVDGYLNYSLNLLDLLNSVSFSLSQL 120

Query: 121 AQSRVLLACALN--------SVAVAKPIVLMRSYRGFENRGVLGGRRKGCSGEESAIWEA 180
             SR+ LA AL+        +VA  KPIV+ R++ G ENRG++  R+KG S EE AI  A
Sbjct: 121 GNSRLSLAYALSLVRSSPLMAVARLKPIVMKRNFMGLENRGIVADRKKGYSSEEWAIERA 180

Query: 181 LAIMEGIGYWVCGVLISGCEGDSAAYFEMRNLAAGVAVPAFAVVDSVVLKVVSGEGSVPV 240
           LA M GIGYWVCGV+ISGCEGDS AY EMR LAAGVAVPAF  +DSVV K    +G+VP 
Sbjct: 181 LATMMGIGYWVCGVVISGCEGDSTAYLEMRRLAAGVAVPAFKELDSVVSK----KGNVPE 240

Query: 241 EVKEVNVA---VAGVVGGSGEAAAAEMRRRLGRLEMAAEKLKKEVDGTFSEVLDGRSCLL 290
           EVKEVN A   V G  GG GE AA EMRRRL RLE A E+L KEVDG FSEVLDGRS LL
Sbjct: 241 EVKEVNCAAKEVIGSGGGDGE-AAEEMRRRLERLEKAVERLVKEVDGRFSEVLDGRSRLL 300

[Close]

BLAST of Sed0019738 vs. NCBI nr
Match: XP_023514538.1 (protein BPS1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 319.3 bits (817), Expect = 3.4e-83
Identity = 196/307 (63.84%), Postives = 222/307 (72.31%), Query Frame = 0


Query: 1   MALLLQSIHKLCS------NNRHRHKPSPSVSHLQSFISIISSSLNQ-IPSISGSNSLSL 60
           M LLLQS +K CS      ++RH ++ S SVS LQ+F + +SS LNQ + S S S +LS 
Sbjct: 1   MLLLLQSFNKHCSKFYNHHHSRHGNRASFSVSCLQAFDAEVSSCLNQLLLSSSDSTTLSF 60

Query: 61  QWLLHLLQALPTLHQAFAKLAADLDHPVAKWGGDLVDGYLNYSLNLLDLLNSVTFSLTQL 120
            WLL LLQALP LH+AFAKL  DLD PVAKWG DLVDGYLNYSLNLLDLLNSV+FSL+QL
Sbjct: 61  HWLLQLLQALPVLHRAFAKLVVDLDCPVAKWGADLVDGYLNYSLNLLDLLNSVSFSLSQL 120

Query: 121 AQSRVLLACALN--------SVAVAKPIVLMRSYRGFENRGVLGGRRKGCSGEESAIWEA 180
             SR+ LA AL+        +VA   PIV+ R++ G ENRG++  R+KG SGEE AI  A
Sbjct: 121 GNSRLSLAYALSLVRSSPLMAVARLNPIVMKRNFMGLENRGIVVDRKKGYSGEEWAIERA 180

Query: 181 LAIMEGIGYWVCGVLISGCEGDSAAYFEMRNLAAGVAVPAFAVVDSVVLKVVSGEGSVPV 240
           LA M GIGYWVCGV+ISGCEGDS AY EMR LAAGV VPAF  +DSVV K+    GSVP 
Sbjct: 181 LATMMGIGYWVCGVVISGCEGDSTAYLEMRRLAAGVVVPAFKELDSVVSKM----GSVPE 240

Query: 241 EVKEVNVA---VAGVVGGSGEAAAAEMRRRLGRLEMAAEKLKKEVDGTFSEVLDGRSCLL 290
           EVKEVN A   V G  GG GE AA EMRRRL RLE A E+L KEVDG FSEVLDGRS LL
Sbjct: 241 EVKEVNCAAKEVVGSGGGDGE-AAEEMRRRLERLEKAVERLVKEVDGRFSEVLDGRSRLL 300

[Close]

BLAST of Sed0019738 vs. NCBI nr
Match: KAG7025628.1 (Protein BPS1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 319.3 bits (817), Expect = 3.4e-83
Identity = 196/307 (63.84%), Postives = 222/307 (72.31%), Query Frame = 0


Query: 1   MALLLQSIHKLCS------NNRHRHKPSPSVSHLQSFISIISSSLNQ-IPSISGSNSLSL 60
           M LLLQS +K CS      ++RH ++ S SVS LQ+F + +SS LNQ + S S S +LS 
Sbjct: 1   MLLLLQSFNKHCSKFYNHHHSRHGNRASFSVSCLQAFDAEVSSCLNQLLLSSSDSRTLSF 60

Query: 61  QWLLHLLQALPTLHQAFAKLAADLDHPVAKWGGDLVDGYLNYSLNLLDLLNSVTFSLTQL 120
            WLL LLQALP LHQAFAKL  DLD PVAKWG DLVDGYLNYSLNLLDLLNSV+FSL+QL
Sbjct: 61  HWLLQLLQALPVLHQAFAKLVVDLDCPVAKWGADLVDGYLNYSLNLLDLLNSVSFSLSQL 120

Query: 121 AQSRVLLACALN--------SVAVAKPIVLMRSYRGFENRGVLGGRRKGCSGEESAIWEA 180
             SR+ LA AL+        +VA  KPIV+ R++ G ENRG++  R+KG SGEE AI  A
Sbjct: 121 GNSRLSLAYALSLVRSSPLMAVAHLKPIVMKRNFMGVENRGIVVDRKKGYSGEEWAIERA 180

Query: 181 LAIMEGIGYWVCGVLISGCEGDSAAYFEMRNLAAGVAVPAFAVVDSVVLKVVSGEGSVPV 240
           LA M GIGYWVCGV+ISGCEGDS AY EM  LAAGV VPAF  +DSVV K    +G+VP 
Sbjct: 181 LATMMGIGYWVCGVVISGCEGDSTAYLEMSRLAAGVTVPAFKQLDSVVSK----KGNVPE 240

Query: 241 EVKEVNVA---VAGVVGGSGEAAAAEMRRRLGRLEMAAEKLKKEVDGTFSEVLDGRSCLL 290
           EVKEVN A   V G  GG GE AA EMRRRL RLE A E+L KEVDG FSEVLDGRS LL
Sbjct: 241 EVKEVNCAAKEVIGSGGGDGE-AAEEMRRRLERLEKAVERLVKEVDGRFSEVLDGRSRLL 300

[Close]

BLAST of Sed0019738 vs. ExPASy Swiss-Prot
Match: Q9LMM6 (Protein BPS1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BPS1 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 4.8e-08
Identity = 35/117 (29.91%), Postives = 65/117 (55.56%), Query Frame = 0


Query: 28  LQSFISIISSSLNQIPSISGSNSLSLQWLLHLLQALPTLHQAFAKLAADLDHPVAKWGGD 87
           L +F + ++SS++++     S+ L++ W+   +++L   H     L  DL+ PV+ W   
Sbjct: 36  LNNFETNLASSISKLVPKEKSDILTVSWMKQAMESLCETHNGIKTLITDLELPVSDWEDK 95

Query: 88  LVDGYLNYSLNLLDLLNSVTFSLTQLAQSRVLLACALNSVAVAKPIVLMRSYRGFEN 145
            VD YL+ S+ LLDL N+ +  LT+L Q  +LL  AL+++    P  L ++    ++
Sbjct: 96  WVDVYLDISVKLLDLCNAFSSELTRLNQGHLLLQFALHNLEANSPQNLSKAQSSLDS 152

[Close]

BLAST of Sed0019738 vs. ExPASy Swiss-Prot
Match: A2Z9A6 (UPF0496 protein 4 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_033149 PE=3 SV=2)

HSP 1 Score: 56.2 bits (134), Expect = 7.0e-07
Identity = 34/98 (34.69%), Postives = 56/98 (57.14%), Query Frame = 0


Query: 28  LQSFISIISSSLNQIPSISGSNSLSLQWLLHLLQALPTLHQAFAKLAADLDHPVAKWGGD 87
           L S+   ++ SL ++   + S+ L+L W+   +  L  LH   A L  DL+ PV+ W   
Sbjct: 36  LASYEDALALSLRKLKPEAASDVLTLSWMRLAVDCLSELHTNIANLITDLELPVSDWDDK 95

Query: 88  LVDGYLNYSLNLLDLLNSVTFSLTQLAQSRVLLACALN 126
            VD YLN S+ LLD+  +++  L++L Q ++LL  AL+
Sbjct: 96  WVDIYLNSSVKLLDICIALSSELSRLDQGQLLLQYALH 133

[Close]

BLAST of Sed0019738 vs. ExPASy Swiss-Prot
Match: Q337C0 (UPF0496 protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0513300 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 7.0e-07
Identity = 34/98 (34.69%), Postives = 56/98 (57.14%), Query Frame = 0


Query: 28  LQSFISIISSSLNQIPSISGSNSLSLQWLLHLLQALPTLHQAFAKLAADLDHPVAKWGGD 87
           L S+   ++ SL ++   + S+ L+L W+   +  L  LH   A L  DL+ PV+ W   
Sbjct: 36  LASYEDALALSLRKLKPEAASDVLTLSWMRLAVDCLSELHTNIANLITDLELPVSDWDDK 95

Query: 88  LVDGYLNYSLNLLDLLNSVTFSLTQLAQSRVLLACALN 126
            VD YLN S+ LLD+  +++  L++L Q ++LL  AL+
Sbjct: 96  WVDIYLNSSVKLLDICIALSSELSRLDQGQLLLQYALH 133

[Close]

BLAST of Sed0019738 vs. ExPASy TrEMBL
Match: A0A6J1H7D5 (protein BPS1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111461156 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.9e-84
Identity = 197/307 (64.17%), Postives = 223/307 (72.64%), Query Frame = 0


Query: 1   MALLLQSIHKLCS------NNRHRHKPSPSVSHLQSFISIISSSLNQ-IPSISGSNSLSL 60
           M LLLQS +K CS      ++RH ++ S SVS LQ+F + +SS LNQ + S S S +LS 
Sbjct: 1   MLLLLQSFNKHCSKFYNHHHSRHGNRASFSVSCLQAFDAEVSSCLNQLLLSSSDSTTLSF 60

Query: 61  QWLLHLLQALPTLHQAFAKLAADLDHPVAKWGGDLVDGYLNYSLNLLDLLNSVTFSLTQL 120
            WLL LLQALP LHQAFAKL  DLD PVAKWG DLVDGYLNYSLNLLDLLNSV+FSL+QL
Sbjct: 61  HWLLQLLQALPVLHQAFAKLVVDLDCPVAKWGADLVDGYLNYSLNLLDLLNSVSFSLSQL 120

Query: 121 AQSRVLLACALN--------SVAVAKPIVLMRSYRGFENRGVLGGRRKGCSGEESAIWEA 180
             SR+ LA AL+        +VA  KPIV+ R++ G ENRG++  R+KG S EE AI  A
Sbjct: 121 GNSRLSLAYALSLVRSSPLMAVARLKPIVMKRNFMGLENRGIVADRKKGYSSEEWAIERA 180

Query: 181 LAIMEGIGYWVCGVLISGCEGDSAAYFEMRNLAAGVAVPAFAVVDSVVLKVVSGEGSVPV 240
           LA M GIGYWVCGV+ISGCEGDS AY EMR LAAGVAVPAF  +DSVV K    +G+VP 
Sbjct: 181 LATMMGIGYWVCGVVISGCEGDSTAYLEMRRLAAGVAVPAFKELDSVVSK----KGNVPE 240

Query: 241 EVKEVNVA---VAGVVGGSGEAAAAEMRRRLGRLEMAAEKLKKEVDGTFSEVLDGRSCLL 290
           EVKEVN A   V G  GG GE AA EMRRRL RLE A E+L KEVDG FSEVLDGRS LL
Sbjct: 241 EVKEVNCAAKEVIGSGGGDGE-AAEEMRRRLERLEKAVERLVKEVDGRFSEVLDGRSRLL 300

[Close]

BLAST of Sed0019738 vs. ExPASy TrEMBL
Match: A0A6J1KTC2 (protein BPS1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111498050 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 3.1e-82
Identity = 189/308 (61.36%), Postives = 222/308 (72.08%), Query Frame = 0


Query: 1   MALLLQSIHKLCS------NNRHRHKPSPSVSHLQSFISIISSSLNQIPSISG-SNSLSL 60
           M LLLQ+ +K CS      ++RH ++ S SVS LQ+F + +SS LNQ+  +S  S +LS 
Sbjct: 1   MLLLLQTFNKHCSKFYNHHHSRHGNRASFSVSLLQAFDAEVSSCLNQLLLLSSDSTTLSF 60

Query: 61  QWLLHLLQALPTLHQAFAKLAADLDHPVAKWGGDLVDGYLNYSLNLLDLLNSVTFSLTQL 120
            WLL LLQALP LH+AF+KL  DLD PVAKWG DLVDGYLNYSLNLLDLLNSV+FSL+QL
Sbjct: 61  HWLLQLLQALPVLHRAFSKLVVDLDCPVAKWGADLVDGYLNYSLNLLDLLNSVSFSLSQL 120

Query: 121 AQSRVLLACALN--------SVAVAKPIVLMRSYRGFENRGVLGGRRKGCSGEESAIWEA 180
             SR+ LA AL+        +VA  KPIV+ R++ G ENRG++  R+K CSGEE AI  A
Sbjct: 121 GNSRLSLAYALSLVRSSPLMAVARLKPIVMKRNFVGLENRGIVVDRKKSCSGEEWAIESA 180

Query: 181 LAIMEGIGYWVCGVLISGCEGDSAAYFEMRNLAAGVAVPAFAVVDSVVLKVVSGEGSVPV 240
           L  M GIGYWVCG++ISGCEGDS AY EMR LAAGV VPAF  +DSVV K    +G+VP 
Sbjct: 181 LVTMMGIGYWVCGIVISGCEGDSTAYLEMRRLAAGVTVPAFKELDSVVSK----KGNVPE 240

Query: 241 EVKEVNVAVAGVV----GGSGEAAAAEMRRRLGRLEMAAEKLKKEVDGTFSEVLDGRSCL 290
           EVKEVN A   VV    GG GE AA EMRRRL RLE A E+L +EVDG FSE+LDGRS L
Sbjct: 241 EVKEVNCAAKEVVGSGGGGDGE-AAEEMRRRLERLEKAVERLVQEVDGRFSEILDGRSRL 300

[Close]

BLAST of Sed0019738 vs. ExPASy TrEMBL
Match: A0A5D3CEU0 (UPF0496 protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00250 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 1.3e-77
Identity = 175/303 (57.76%), Postives = 215/303 (70.96%), Query Frame = 0


Query: 1   MALLLQSIHKLCSN------NRHRHK-PSPSVSHLQSFISIISSSLNQ-IPSISGSNSLS 60
           M LLLQ+ +K CS       NRH  K  S S+S L +F   +S+ LN  + S S S  LS
Sbjct: 1   MPLLLQTFNKFCSKLDNRHPNRHGSKLASFSLSRLHAFEDDVSACLNHLLLSTSASKPLS 60

Query: 61  LQWLLHLLQA-LPTLHQAFAKLAADLDHPVAKWGGDLVDGYLNYSLNLLDLLNSVTFSLT 120
             +LL LLQ  LPT+HQ+FAKL  DL++PV +W  DLVDGYLNYSLNLLDLLNS++FSLT
Sbjct: 61  FHYLLQLLQGLLPTIHQSFAKLVVDLEYPVGRWRADLVDGYLNYSLNLLDLLNSISFSLT 120

Query: 121 QLAQSRVLLACALN--------SVAVAKPIVLMRSYRGFENRGVLGGRRKGCSGEESAIW 180
           QL  SRV L+ AL+        +V+  KPI L R   G E RG +   +KGCSGEE AI 
Sbjct: 121 QLGNSRVSLSYALSLIQSSPAMAVSRLKPIALKRYSEGLEIRGNVKDLKKGCSGEERAIE 180

Query: 181 EALAIMEGIGYWVCGVLISGCEGDSAAYFEMRNLAAGVAVPAFAVVDSVVLKVVSGEGSV 240
           +ALA MEGIGYW+CG+++SGCEGD+ AY EMR LA+GV VPAF  +DSV+  VV+G+GSV
Sbjct: 181 KALATMEGIGYWICGIVLSGCEGDATAYLEMRRLASGVTVPAFKALDSVISAVVAGKGSV 240

Query: 241 PVEVKEVNVAVAGVVGGSGEAAAAEMRRRLGRLEMAAEKLKKEVDGTFSEVLDGRSCLLD 287
           P EV+EVNVAV  ++GGSGE A  EMR+R+GRLE   E + KEVDG FSEVLDGR+ +LD
Sbjct: 241 PEEVEEVNVAVEMIIGGSGE-AVEEMRKRMGRLEKTVEGMGKEVDGRFSEVLDGRTRMLD 300

[Close]

BLAST of Sed0019738 vs. ExPASy TrEMBL
Match: A0A1S4E356 (UPF0496 protein 4-like OS=Cucumis melo OX=3656 GN=LOC107991802 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 1.3e-77
Identity = 175/303 (57.76%), Postives = 215/303 (70.96%), Query Frame = 0


Query: 1   MALLLQSIHKLCSN------NRHRHK-PSPSVSHLQSFISIISSSLNQ-IPSISGSNSLS 60
           M LLLQ+ +K CS       NRH  K  S S+S L +F   +S+ LN  + S S S  LS
Sbjct: 1   MPLLLQTFNKFCSKLDNRHPNRHGSKLASFSLSRLHAFEDDVSACLNHLLLSTSASKPLS 60

Query: 61  LQWLLHLLQA-LPTLHQAFAKLAADLDHPVAKWGGDLVDGYLNYSLNLLDLLNSVTFSLT 120
             +LL LLQ  LPT+HQ+FAKL  DL++PV +W  DLVDGYLNYSLNLLDLLNS++FSLT
Sbjct: 61  FHYLLQLLQGLLPTIHQSFAKLVVDLEYPVGRWRADLVDGYLNYSLNLLDLLNSISFSLT 120

Query: 121 QLAQSRVLLACALN--------SVAVAKPIVLMRSYRGFENRGVLGGRRKGCSGEESAIW 180
           QL  SRV L+ AL+        +V+  KPI L R   G E RG +   +KGCSGEE AI 
Sbjct: 121 QLGNSRVSLSYALSLIQSSPAMAVSRLKPIALKRYSEGLEIRGNVKDLKKGCSGEERAIE 180

Query: 181 EALAIMEGIGYWVCGVLISGCEGDSAAYFEMRNLAAGVAVPAFAVVDSVVLKVVSGEGSV 240
           +ALA MEGIGYW+CG+++SGCEGD+ AY EMR LA+GV VPAF  +DSV+  VV+G+GSV
Sbjct: 181 KALATMEGIGYWICGIVLSGCEGDATAYLEMRRLASGVTVPAFKALDSVISAVVAGKGSV 240

Query: 241 PVEVKEVNVAVAGVVGGSGEAAAAEMRRRLGRLEMAAEKLKKEVDGTFSEVLDGRSCLLD 287
           P EV+EVNVAV  ++GGSGE A  EMR+R+GRLE   E + KEVDG FSEVLDGR+ +LD
Sbjct: 241 PEEVEEVNVAVEMIIGGSGE-AVEEMRKRMGRLEKTVEGMGKEVDGRFSEVLDGRTRMLD 300

[Close]

BLAST of Sed0019738 vs. ExPASy TrEMBL
Match: A0A6J1DLC1 (UPF0496 protein 4-like OS=Momordica charantia OX=3673 GN=LOC111021599 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.9e-76
Identity = 181/314 (57.64%), Postives = 217/314 (69.11%), Query Frame = 0


Query: 1   MALLLQSIHKLCS---NNRHRH-------KPSPSVSHLQSFISIISSSLNQI-PSISGSN 60
           M LLLQ+ +KLCS   N+ H H       + S + SHLQ+F S +SS L Q   S S S 
Sbjct: 1   MVLLLQTFNKLCSKLDNHHHHHHHRRHGSQASSAASHLQAFESDVSSCLIQFSASSSDSR 60

Query: 61  SLSLQWLLHLLQALPTLHQAFAKLAADLDHPVAKWGGDLVDGYLNYSLNLLDLLNSVTFS 120
            LS  WLL LLQ LP +HQAF KLA +L+HPV +W  DLVDGYLNY+LNLLDLLNSV+FS
Sbjct: 61  LLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFS 120

Query: 121 LTQLAQSRVLLACALN------SVAV--AKPIVLMRSYRGFENRGVLGGRRKGCSGEESA 180
           L+QL QSR+LL+ AL       S+AV   KPIV  +++R FE +  +  RRKGCSGE+ A
Sbjct: 121 LSQLGQSRLLLSHALGLIQSSPSMAVERMKPIVPKKNFREFEIKAAVRDRRKGCSGEDWA 180

Query: 181 IWEALAIMEGIGYWVCGVLISGCEGDSAAYFEMRNLAAGVAVPAFAVVDSVVLKVVSGEG 240
           I  AL  MEGIGYWVCG+++SGCEGDS AY   R  AAGVA+ +F  +DSVVL+ VSG+G
Sbjct: 181 IERALVTMEGIGYWVCGIVLSGCEGDSTAYLAARKSAAGVAISSFKSLDSVVLEAVSGKG 240

Query: 241 SVPVEVKEVNVAVAGVV-----GGSGEAAAA-EMRRRLGRLEMAAEKLKKEVDGTFSEVL 290
           SVP EV+E+N A A V      G SG   AA EMRRR  RLE   E+L+KEVDG FSEVL
Sbjct: 241 SVPEEVEELNEAAALVAADLVNGRSGSGGAAEEMRRRSERLEKEVERLRKEVDGRFSEVL 300

[Close]

BLAST of Sed0019738 vs. TAIR 10
Match: AT1G01550.1 (Protein of unknown function (DUF793) )

HSP 1 Score: 60.1 bits (144), Expect = 3.4e-09
Identity = 35/117 (29.91%), Postives = 65/117 (55.56%), Query Frame = 0


Query: 28  LQSFISIISSSLNQIPSISGSNSLSLQWLLHLLQALPTLHQAFAKLAADLDHPVAKWGGD 87
           L +F + ++SS++++     S+ L++ W+   +++L   H     L  DL+ PV+ W   
Sbjct: 36  LNNFETNLASSISKLVPKEKSDILTVSWMKQAMESLCETHNGIKTLITDLELPVSDWEDK 95

Query: 88  LVDGYLNYSLNLLDLLNSVTFSLTQLAQSRVLLACALNSVAVAKPIVLMRSYRGFEN 145
            VD YL+ S+ LLDL N+ +  LT+L Q  +LL  AL+++    P  L ++    ++
Sbjct: 96  WVDVYLDISVKLLDLCNAFSSELTRLNQGHLLLQFALHNLEANSPQNLSKAQSSLDS 152

[Close]

BLAST of Sed0019738 vs. TAIR 10
Match: AT1G01550.2 (Protein of unknown function (DUF793) )

HSP 1 Score: 60.1 bits (144), Expect = 3.4e-09
Identity = 35/117 (29.91%), Postives = 65/117 (55.56%), Query Frame = 0


Query: 28  LQSFISIISSSLNQIPSISGSNSLSLQWLLHLLQALPTLHQAFAKLAADLDHPVAKWGGD 87
           L +F + ++SS++++     S+ L++ W+   +++L   H     L  DL+ PV+ W   
Sbjct: 36  LNNFETNLASSISKLVPKEKSDILTVSWMKQAMESLCETHNGIKTLITDLELPVSDWEDK 95

Query: 88  LVDGYLNYSLNLLDLLNSVTFSLTQLAQSRVLLACALNSVAVAKPIVLMRSYRGFEN 145
            VD YL+ S+ LLDL N+ +  LT+L Q  +LL  AL+++    P  L ++    ++
Sbjct: 96  WVDVYLDISVKLLDLCNAFSSELTRLNQGHLLLQFALHNLEANSPQNLSKAQSSLDS 152

[Close]

BLAST of Sed0019738 vs. TAIR 10
Match: AT2G46080.1 (CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF793) (TAIR:AT1G01550.2); Has 153 Blast hits to 139 proteins in 20 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 150; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 52.8 bits (125), Expect = 5.5e-07
Identity = 33/103 (32.04%), Postives = 54/103 (52.43%), Query Frame = 0


Query: 25  VSHLQSFISIISSSLNQIPSISGSNSLSLQWLLHLLQALPTLHQAFAKLAADLDHPVAKW 84
           +S L  F   +   L ++   +  + L+L W+   +++L   H+    L  DL  PV+ W
Sbjct: 33  LSLLNGFELRLEERLKKLMPKNKDDILTLSWMKLAMESLCETHKNINTLITDLQLPVSDW 92

Query: 85  GGDLVDGYLNYSLNLLDLLNSVTFSLTQLAQSRVLLACALNSV 128
               VD YLN S+ LLDL N+ +  LT+L Q  + L C L+++
Sbjct: 93  EEKWVDVYLNISVRLLDLCNAFSSELTRLNQGDLFLKCVLHNL 135

The following BLAST results are available for this feature:

BLAST of Sed0019738 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896303.1	6.2e-85	62.17	protein BPS1, chloroplastic-like [Benincasa hispida]	[more]
KAG6593278.1	1.1e-84	64.50	Protein BPS1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022960422.1	4.0e-84	64.17	protein BPS1, chloroplastic-like [Cucurbita moschata]	[more]
XP_023514538.1	3.4e-83	63.84	protein BPS1, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
KAG7025628.1	3.4e-83	63.84	Protein BPS1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]

BLAST of Sed0019738 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LMM6	4.8e-08	29.91	Protein BPS1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BPS1 PE=2 SV=1	[more]
A2Z9A6	7.0e-07	34.69	UPF0496 protein 4 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_033149 PE=3 SV=2	[more]
Q337C0	7.0e-07	34.69	UPF0496 protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0513300 PE=2 ...	[more]

BLAST of Sed0019738 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H7D5	1.9e-84	64.17	protein BPS1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111461156 P...	[more]
A0A6J1KTC2	3.1e-82	61.36	protein BPS1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111498050 PE=...	[more]
A0A5D3CEU0	1.3e-77	57.76	UPF0496 protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4...	[more]
A0A1S4E356	1.3e-77	57.76	UPF0496 protein 4-like OS=Cucumis melo OX=3656 GN=LOC107991802 PE=4 SV=1	[more]
A0A6J1DLC1	1.9e-76	57.64	UPF0496 protein 4-like OS=Momordica charantia OX=3673 GN=LOC111021599 PE=4 SV=1	[more]

BLAST of Sed0019738 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01550.1	3.4e-09	29.91	Protein of unknown function (DUF793)	[more]
AT1G01550.2	3.4e-09	29.91	Protein of unknown function (DUF793)	[more]
AT2G46080.1	5.5e-07	32.04	CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST Ar...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 246..266
None	No IPR available	PANTHER	PTHR31509:SF13	PROTEIN BPS1, CHLOROPLASTIC-LIKE	coord: 1..289
None	No IPR available	PANTHER	PTHR31509	BPS1-LIKE PROTEIN	coord: 1..289

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0019738.1	Sed0019738.1	mRNA