Sed0019730 (gene) Chayote v1

Overview


Name	Sed0019730
Type	gene
Organism	Sechium edule (Chayote v1)
Description	26S proteasome non-ATPase regulatory subunit 4 homolog
Location	LG04: 11100060 .. 11105798 (+)
RNA-Seq Expression	Sed0019730
Synteny	Sed0019730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAGTACTAAGAAAAAAAAAATATTATATTTTCTATAGTTACACACCTTCGGCTTATTCTGCAAGAAACTTCAGCCTTCTCTGCAATTCTCTCACACTTCTTCGATTTCTCGGTGTTTTCAATCTCTCAAAAATGGTGCTCGAGGTAATTACCAATCCCTAATCTCTTTTTCCAGATCCCAAATTTCATCCCACATTTCCCTTTTTTTTTTTTTTTTTTGGAATTTCACTCTTCTCTACTTAGTTTAACGACCTAGGGTTCTTATGGATGCGAAACTATACATTTTTTCCGTTTTTTTTTAGGCGACGATGATCTGTATCGACAATTCGGAATGGATGAGGAATGGCGATTATGCTCCTTCGAGGTTTCAAGCTCAATCGGACGCCGTCAATCTCATTTGCGGGGCTAAAACTCAGGTCATTGATCGATTTCTCCTGTTTGGTTATGTTTTTTTGTTCCGTTTTGGAGTGAAATTAGATCTGCTATCTCTTTTTCATCCGTTGCCTTTAATCTTTATTGTAATTAGGGTTATTTGGGTGAGGAGATTTTGTTTACTGTGAAAAAATCCATATCTGATAGTCTCGCCTTTTTCTTAACATATGATTCTGAAGTGTTTATGAAAGTATTTTATCGTTTTCTCTTTTGCTTGCAGTCTAATCCGGAGAATACAGTGGGAGTTCTTACAATGGCTGGAAAAGGGGTTCGAGTTTTGGTAACTCCTACAAGTGATCTTGGCAAGATTCTAGGATGCATGCACGGTTAGTTCTTCTCTTTGAAGTTAGCTCCCTTTCTTACTCTGTAAGTCTGGGTCTTCATAAAAATGCCATGAGAGACTTACTGGACCTTGCAAAAGTTTCTTTTTTCTTCTTTTAAGTAGTACATGACCTCGTAACTATCTTTTAAGATACTTATATTTCATTGTTTTTGTATTTGGATGCCTTTCTCTTCAGCACCTAACTATCCCCAATATTAGAAATCTACAAGCTATGTATGGGTTTATTCAATAGTAATCGCCTACCAAGAAATTAATTTTCTACAAGTTTCTTGGACAACCAAATGTAATAGAGTCAAACTGTAAACCGTTTTCCTGTGAAAATAGTCTAGGTGCAGTGTAAGTTTGTCCTGAGGCTGGCACGAACAATCAAAAGAATGGCAAATTTTGAAATCAACTCTTTTAGTTCTGTTACTTATCTGTGGATGGTTCCATGCTCTCTCTCACGATTGATGATGTTTTGGACCCTTCAAAGTGCATATTATTTGTTATCTATATACAACAGATTATTTCACCTCCGAGTATTTGTAGAAAAGAGTTGATGTGGTGGCCTGGGAGGTTTCAAGCGGTCTTTATCCAATTGGGAAACACTTGATGTGATGACTCTTCTTGATCTCGTGGGGAGTTTCTGTTGTGTGGTGTGGCATAACGATATTTGTTGCTCAAATCCTAATGCAGCAGATGGCTTTTCTTGTTGTTCTTTTTTTGTTGCCTAGTTTTTTCTTCCCATTTAGAAGATTCGGCCTTTTTCCAATTGTTGAAGGTGAAGTTTTGACTTTTGAGGAAGGATAAGTTTTGCATGGCAACGTTAATAGCTAATACTCTTCATAGGGTGATGAGATTGGTTCTTTCTTTTATGGGCCCGTCGTGTCCTGTTTTAGATAGGAGGGCAGATGAGGATTTAGATCATCTGCTCTAGAAGTGCAATTTGGTGTCCAAGGTGTGGAATTTGTTCTTCGAGGCTTTTGGTTTGGCTTTGGTATGTCCCAAAAGTGAAGAGTCATGATCGGGAGTGGTTACTTTGAGGTCCTTTAATGATAAAGGAACTTTTGTGGAAAGTTGGGATTTGTGCTAACTTGCTTGTGATTTCTTTGGGGTGAGAGAAACCATAGAAGTAGAGGGGTGGAGGGATCTTGGAAGGATATTTGGGCTCTCATTAAATTCTATGTTTCTCTTTAGGCCTTAGTTACTAAACTTTTTTGTAATTATCCTTTAGATTGGAGACTGATCTTGCAGGGGGGGGGGGCATATTTTTTTGTTTTGGCTGCTTTTTTTCTATGCCTTTGTATAGTTCATTCTTATCTCAGTGGAAGTTTGGTTCATTAAAAAAATTGCGTCTAAATATCTGTTCAAAAGTATGTGAAATAGTTTTTGTTACAATTGTTCAAGGTATTATATTTAGCATTGGAAATAATTTTTACGGTAATTATATTGTAAATGCTTATTGGCCCATATTTTACTCATTCGATGTAATGCATTATTACTTACAATAATTCCTATTGAAGTTGATAATTTTTTTTTTTATATTTTGTTCATTTCTCCCTTGTAGTCCTGTCATTTTTTTTAATAATGACATTTCAGCTGAGTGAAGATATAGACAGTTCTCTTAAATATTTTTCCCAAAGAAAATAATACATTCCTCAAAATTCTTAGGGAGGAAAACTGTCCAATTTTAAGGTGGTAATGTACATAGATTTAGTAATTACATTTACAATTCTTTACACTTTAGATGCCACACATTATTTCACGTACTGTGAGCTAGCTGTAATTTATTCCCGAGTGAAGTGATGTGATCTTTTTTGCTATATTTCTCACTATGCCCTTACTCTTTGAAACTTAAGATTTTCCTTTTTGTCCATAATAGGTTTAGAGATTGGTGGGGAGACAAACTTGGCTGCTGGGATCCAGGTGGCTCAGTTGGCTCTCAAGCATCGTCAGAATAAGAAGCAGCACCAAAGAATTATTGTTTTTGCGGGAAGGTAGGTTCTTCTATCCCTTTTAATGCATGTTTATTGTCCCATACCAGCTATTAATTGTTCATAAGTATCTATTCTATGTATACTTAGTCCTGCCAAACATGACAAAAAGTTGTTGGAGATGATTGGAAAGAAACTAAAGAAGAACAATGTTGCACTTGATATTATTGATTTTGGTGAAGAAGATGATGGTAAGCCAGAGAAGCTGGAAGCCCTTCTTTCAGCTGTAAACAGTAATGACTCCAGTCACATTGTTCACGTTCCCTCTGGTCCAATTGCTCTTTCCGATGTACTTATTAGGTCAGTTGCTTCCTCTCTGTCTCTCTGGTTGAGGAAATAGTTGCTTGTTATTGTTTCCATTGTTTCATATTGTTTGATATAGTAAAATAAACATTTTCTCCTTCCATGTCAGTACTCCGATCTTCACCGGTGATGAGGAGGGAGGAAGTGGATTTGCAGCAGCTGCTGCAGCAGCTTCAGCTGGTGGGGCTGGTTTTGATTTTGGTGTTGATCCCAACCTAGACCCTGAACTAGCACTTGCCCTTCGAGTTTCAATGGAAGAGGAAAGGGCTAGACAGGAGGCAGCTGCTAAGAAAGCTGCTGATGAAACTTCAAAGCAGGAAAAAGGAGGGGAACAGCCATCTGGCTCACAGGATACAACTATGAATGAACAGGTTATTTCTGCACCTTCTAATGCTCAAAAGACACTTGATTGAATGGTTGGTTTGCGTACATTAAATAACTAATAAGTTCAAATACTACAGAAGAAAAATAGAATTTCCATCATTTCAAATATTTCCTATGAGCCTTACTTCATTGCTTATCTTGCTTTCTCTCCTCTCACTCTTGGCTTGATGCATAGCCTATACTTTGTTCTTGATTTGACAACTTAATAGAAAATTAAAGTATGTGGTACGTTTTGATATTCAGTCTGGATTTAATTACAGGAGGACGAGAATACACTGCTACAACAAGCCCTAGCAATGTCGATGGACGACCCTGGCTCTAGTCATGAAGTGCACGATACAGAAATGTCAGATGCTGCTATAGATGATCCAGAGTTAGCTCTTGGTAAGGGGTTTATTACTTCCAAATTTCCCTTTTTTTTAATTGTGAATGTGTGCTTTTCTTCCCTCCTCTCATGGTCCGCCATTGCCTTCAAGAAACTTGTTGAGGAAACTGTTAACCCATTTGTTGTTCTAGTAACTTCAAGGATAAGTTCCCAAGGGGTGGTGCAGTGGTTGAAGACTTGGGCTTTGAGGGTACGCTCCCCTCAATGTTCTAGGTTCGAGACTCGTGTCTAGGGACGGACGTGGTTACCCTTGTTTCAAAAAAAAAAGTAACTTAAAAGGATATGTTATTGCGGTTGAATATAGCTTTATGAAAGCTTCTATCCTGTTCAGAGACTGCACATCCCTAATTTTTTGCCTAGTTGATTTGCATGAAAACCTTACCTGCTAATCTTTCAGTAGTGTGCCACGGAACAAAACATTTCTGTCCATTAAAAGTTCACTTCACTTGTAAAAAATGTTATTGCACTTGAACTGAAAGTATATTCTATCTTTTCGATCTTTCTTATCTTGCATCTTCGTTTGTTCTTGGTTGGTTGCAGCTCTTCAGTTGTCCGTGCAGGAGGAGGCTAAAGACTCAACAAGCCAACCTGATATGAGTAAACTACTGGAAGACCAGTCATTCGTATCCTCAATTCTTGCATCGGTATGATTCTACAACGTGTACTCTGAACTTGTAGAATTACTAACTTAAAATATCTTCTAAAACCACTTATAAGTATTATTTTCACCATCACTTCTAGTTATCAAGTAAAACCGGGTGTTTGGATAGATAGTTTGGGAAGGTTTATTCAGAAGTTGACTCAACCTACGTTTGGATGAAGCAGCTCTAAAAAGGTCCCTAAAAGCCCCCAAAAAAACTTCCATAAAACCTTCCTAAACCTGCAAGTACACTATCATTTCTACTTTAACCACTCGTAACCTCTCAATTCAAATGAGAGTTTTCTTTTCCAACCACTCATAATCTCTTTATCTAAATAAGGGTTTCTATTATAACCACTAATATTCTCTCAATCCAAATAAGGTTTATCTTCACCAAACATCTTATAACCACTCAAAATCTCTCATAACCACTATTCATTTCCAAAACTCTATTCAAACATTCCTATGAGTCTAAAAATGTGCTTTTTACCGGGCCACCAAACCTTTAAAAAATAATTCCAACATTGGGTTATTGTAACACTTTGGTTTTCTCTTAAACAAATCATTCTACAATTGTCTACAGGTAGCTCAATTAGTTAAAACATATATTTTCGACCAATCAGTTAGAGGTTTTTAATCTTCCACCCAACGTGTTGAACTCAAAAGTCATTCTAACCTCACCCTAAGAGGAAAAAAATTGGCTCCAAACATCTGGTTTATGTCTAATCGATACAAGTGGATGTTTTTTTGCAGCTTCCAGGGGTTGATCCAAATGATCCATCTGTCAAAGATTTACTGGCTTCCATGCAAAGTCAGTCAAAGCCAGAGGTTAGTTTGTGTTCCCTTAAGCAACATGAGTAAATTAAAAAACAATGGAATGTGGCGATTTCTTTAAACTGGAGTTGCTTCTTGTCCTTAAACATAAATACACTGAAGATTAAAATTGTGTGTTATTTCGAAATCTTGTTTCAGGACAAGAAGAACGAAGATAAACCCAAGGAAGACGAGGACAAATGATCCATCCATCTTTCAAAGGTGAATATTCTGCTAGTTATTTCCTTCGGTAAAACTGGTTGCATTGTGTTCACCAGCAAAAGTCGTCAGTTTTTTTGCTTTTGGTTAGGCTGAAAACAAGAATTCATCACTTTTGATGTCTAAAAAAGCGACTCCCTGATCTTTTAATTTGTACTATGATACTGTACTCTTGTTCATCATCTCCCGATCTTTTAAGAATGCACCATTAATCAAAATATGCATCACTTTTTTTTTTGAGAACAAA

mRNA sequence

GTAGTACTAAGAAAAAAAAAATATTATATTTTCTATAGTTACACACCTTCGGCTTATTCTGCAAGAAACTTCAGCCTTCTCTGCAATTCTCTCACACTTCTTCGATTTCTCGGTGTTTTCAATCTCTCAAAAATGGTGCTCGAGGCGACGATGATCTGTATCGACAATTCGGAATGGATGAGGAATGGCGATTATGCTCCTTCGAGGTTTCAAGCTCAATCGGACGCCGTCAATCTCATTTGCGGGGCTAAAACTCAGTCTAATCCGGAGAATACAGTGGGAGTTCTTACAATGGCTGGAAAAGGGGTTCGAGTTTTGGTAACTCCTACAAGTGATCTTGGCAAGATTCTAGGATGCATGCACGGTTTAGAGATTGGTGGGGAGACAAACTTGGCTGCTGGGATCCAGGTGGCTCAGTTGGCTCTCAAGCATCGTCAGAATAAGAAGCAGCACCAAAGAATTATTGTTTTTGCGGGAAGTCCTGCCAAACATGACAAAAAGTTGTTGGAGATGATTGGAAAGAAACTAAAGAAGAACAATGTTGCACTTGATATTATTGATTTTGGTGAAGAAGATGATGGTAAGCCAGAGAAGCTGGAAGCCCTTCTTTCAGCTGTAAACAGTAATGACTCCAGTCACATTGTTCACGTTCCCTCTGGTCCAATTGCTCTTTCCGATGTACTTATTAGTACTCCGATCTTCACCGGTGATGAGGAGGGAGGAAGTGGATTTGCAGCAGCTGCTGCAGCAGCTTCAGCTGGTGGGGCTGGTTTTGATTTTGGTGTTGATCCCAACCTAGACCCTGAACTAGCACTTGCCCTTCGAGTTTCAATGGAAGAGGAAAGGGCTAGACAGGAGGCAGCTGCTAAGAAAGCTGCTGATGAAACTTCAAAGCAGGAAAAAGGAGGGGAACAGCCATCTGGCTCACAGGATACAACTATGAATGAACAGGAGGACGAGAATACACTGCTACAACAAGCCCTAGCAATGTCGATGGACGACCCTGGCTCTAGTCATGAAGTGCACGATACAGAAATGTCAGATGCTGCTATAGATGATCCAGAGTTAGCTCTTGCTCTTCAGTTGTCCGTGCAGGAGGAGGCTAAAGACTCAACAAGCCAACCTGATATGAGTAAACTACTGGAAGACCAGTCATTCGTATCCTCAATTCTTGCATCGCTTCCAGGGGTTGATCCAAATGATCCATCTGTCAAAGATTTACTGGCTTCCATGCAAAGTCAGTCAAAGCCAGAGGACAAGAAGAACGAAGATAAACCCAAGGAAGACGAGGACAAATGATCCATCCATCTTTCAAAGGTGAATATTCTGCTAGTTATTTCCTTCGGTAAAACTGGTTGCATTGTGTTCACCAGCAAAAGTCGTCAGTTTTTTTGCTTTTGGTTAGGCTGAAAACAAGAATTCATCACTTTTGATGTCTAAAAAAGCGACTCCCTGATCTTTTAATTTGTACTATGATACTGTACTCTTGTTCATCATCTCCCGATCTTTTAAGAATGCACCATTAATCAAAATATGCATCACTTTTTTTTTTGAGAACAAA

Coding sequence (CDS)

ATGGTGCTCGAGGCGACGATGATCTGTATCGACAATTCGGAATGGATGAGGAATGGCGATTATGCTCCTTCGAGGTTTCAAGCTCAATCGGACGCCGTCAATCTCATTTGCGGGGCTAAAACTCAGTCTAATCCGGAGAATACAGTGGGAGTTCTTACAATGGCTGGAAAAGGGGTTCGAGTTTTGGTAACTCCTACAAGTGATCTTGGCAAGATTCTAGGATGCATGCACGGTTTAGAGATTGGTGGGGAGACAAACTTGGCTGCTGGGATCCAGGTGGCTCAGTTGGCTCTCAAGCATCGTCAGAATAAGAAGCAGCACCAAAGAATTATTGTTTTTGCGGGAAGTCCTGCCAAACATGACAAAAAGTTGTTGGAGATGATTGGAAAGAAACTAAAGAAGAACAATGTTGCACTTGATATTATTGATTTTGGTGAAGAAGATGATGGTAAGCCAGAGAAGCTGGAAGCCCTTCTTTCAGCTGTAAACAGTAATGACTCCAGTCACATTGTTCACGTTCCCTCTGGTCCAATTGCTCTTTCCGATGTACTTATTAGTACTCCGATCTTCACCGGTGATGAGGAGGGAGGAAGTGGATTTGCAGCAGCTGCTGCAGCAGCTTCAGCTGGTGGGGCTGGTTTTGATTTTGGTGTTGATCCCAACCTAGACCCTGAACTAGCACTTGCCCTTCGAGTTTCAATGGAAGAGGAAAGGGCTAGACAGGAGGCAGCTGCTAAGAAAGCTGCTGATGAAACTTCAAAGCAGGAAAAAGGAGGGGAACAGCCATCTGGCTCACAGGATACAACTATGAATGAACAGGAGGACGAGAATACACTGCTACAACAAGCCCTAGCAATGTCGATGGACGACCCTGGCTCTAGTCATGAAGTGCACGATACAGAAATGTCAGATGCTGCTATAGATGATCCAGAGTTAGCTCTTGCTCTTCAGTTGTCCGTGCAGGAGGAGGCTAAAGACTCAACAAGCCAACCTGATATGAGTAAACTACTGGAAGACCAGTCATTCGTATCCTCAATTCTTGCATCGCTTCCAGGGGTTGATCCAAATGATCCATCTGTCAAAGATTTACTGGCTTCCATGCAAAGTCAGTCAAAGCCAGAGGACAAGAAGAACGAAGATAAACCCAAGGAAGACGAGGACAAATGA

Protein sequence

MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQHQRIIVFAGSPAKHDKKLLEMIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPIALSDVLISTPIFTGDEEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQEAAAKKAADETSKQEKGGEQPSGSQDTTMNEQEDENTLLQQALAMSMDDPGSSHEVHDTEMSDAAIDDPELALALQLSVQEEAKDSTSQPDMSKLLEDQSFVSSILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEDKPKEDEDK

Homology

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BLAST of Sed0019730 vs. NCBI nr
Match: XP_038876565.1 (26S proteasome non-ATPase regulatory subunit 4 homolog [Benincasa hispida])

HSP 1 Score: 656.0 bits (1691), Expect = 2.0e-184
Identity = 363/404 (89.85%), Postives = 375/404 (92.82%), Query Frame = 0


Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAVNLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDYAPSRFQAQ+DAVNLICGAKTQSNPENTVGVLTMAGKGVR
Sbjct: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR 60

Query: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQHQRIIVFAGSPAKH 120
           VLVTPTSDLGKIL CMHGLEIGGETNLAAGIQVAQLALKHRQNKKQ QRIIVFAGSPA  
Sbjct: 61  VLVTPTSDLGKILACMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANQ 120

Query: 121 DKKLLEMIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPIAL 180
           +KKLLEMIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGP AL
Sbjct: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180

Query: 181 SDVLISTPIFTGDEEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR 240
           SDVLISTPIFTGD EGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR
Sbjct: 181 SDVLISTPIFTGDGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR 240

Query: 241 QEAAAKKAADETSKQEKGGEQPSGSQDTTMNEQ---------------EDENTLLQQALA 300
           QEAAAK+AA+ETSKQEKGGEQPSGSQDTTMNE+               EDEN LLQQALA
Sbjct: 241 QEAAAKRAAEETSKQEKGGEQPSGSQDTTMNERASAESSDAQKTSDPMEDENALLQQALA 300

Query: 301 MSMDDPGSSHEVHDTEMSDAAIDDPELALALQLSVQEEAKDSTSQPDMSKLLEDQSFVSS 360
           MSM+DP SS+++ DTEMSDAA+ DPELALALQLSVQE+AKDSTSQPDMSKLL DQSFVSS
Sbjct: 301 MSMEDPASSNDMRDTEMSDAAM-DPELALALQLSVQEDAKDSTSQPDMSKLLADQSFVSS 360

Query: 361 ILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEDK-PKEDEDK 389
           ILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNE+  PKED DK
Sbjct: 361 ILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDSDK 403

[Close]

BLAST of Sed0019730 vs. NCBI nr
Match: XP_023553520.1 (26S proteasome non-ATPase regulatory subunit 4 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 655.2 bits (1689), Expect = 3.5e-184
Identity = 362/404 (89.60%), Postives = 373/404 (92.33%), Query Frame = 0


Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAVNLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDYAPSRFQAQ+DAVNLICGAKTQSNPENTVGVLTMAGKGVR
Sbjct: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR 60

Query: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQHQRIIVFAGSPAKH 120
           VLVTPTSDLGKIL CMHGLE+GGETNLAAGIQVAQLALKHRQNKKQ QRIIVFAGSPA H
Sbjct: 61  VLVTPTSDLGKILACMHGLELGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANH 120

Query: 121 DKKLLEMIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPIAL 180
           DKKLLE IGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGP AL
Sbjct: 121 DKKLLETIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180

Query: 181 SDVLISTPIFTGDEEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR 240
           SDVLISTPIFTGD EGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR
Sbjct: 181 SDVLISTPIFTGDGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR 240

Query: 241 QEAAAKKAADETSKQEKGGEQPSGSQDTTMNEQ---------------EDENTLLQQALA 300
           QE AAKKAA+ETSKQEKG  QPSGSQDTTMNE+               +D+N LLQQALA
Sbjct: 241 QETAAKKAAEETSKQEKGEAQPSGSQDTTMNERASAETSDAQKTSDPMDDDNALLQQALA 300

Query: 301 MSMDDPGSSHEVHDTEMSDAAIDDPELALALQLSVQEEAKDSTSQPDMSKLLEDQSFVSS 360
           MSM+DP SSH+V DTEMSDAAI DPELALALQLSVQE+AKDSTSQPDMSKLL DQSFVSS
Sbjct: 301 MSMEDPASSHDVRDTEMSDAAI-DPELALALQLSVQEDAKDSTSQPDMSKLLADQSFVSS 360

Query: 361 ILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEDK-PKEDEDK 389
           ILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNE+  PKED+DK
Sbjct: 361 ILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDDDK 403

[Close]

BLAST of Sed0019730 vs. NCBI nr
Match: XP_022965261.1 (26S proteasome non-ATPase regulatory subunit 4 homolog [Cucurbita maxima])

HSP 1 Score: 653.3 bits (1684), Expect = 1.3e-183
Identity = 358/402 (89.05%), Postives = 371/402 (92.29%), Query Frame = 0


Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAVNLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDYAPSRFQAQ+DAVNLICGAKTQSNPENTVGVLTMAGKGVR
Sbjct: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR 60

Query: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQHQRIIVFAGSPAKH 120
           VLVTPTSDLGKIL CMHGLE+GGETNLAAGIQVAQLALKHRQNKKQ QRIIVFAGSPA H
Sbjct: 61  VLVTPTSDLGKILACMHGLELGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANH 120

Query: 121 DKKLLEMIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPIAL 180
           DKKLLE IGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGP AL
Sbjct: 121 DKKLLETIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180

Query: 181 SDVLISTPIFTGDEEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR 240
           SDVLISTPIFTGD EGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR
Sbjct: 181 SDVLISTPIFTGDGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR 240

Query: 241 QEAAAKKAADETSKQEKGGEQPSGSQDTTMNEQ---------------EDENTLLQQALA 300
           QE AAKKAA+ETSKQEKG  QPSGSQDTTMNE+               +D+N LLQQALA
Sbjct: 241 QETAAKKAAEETSKQEKGEAQPSGSQDTTMNERASAETSDAQKTSDPMDDDNALLQQALA 300

Query: 301 MSMDDPGSSHEVHDTEMSDAAIDDPELALALQLSVQEEAKDSTSQPDMSKLLEDQSFVSS 360
           MSM+DP SSH+V DTEMSDAAI DPELALALQLSVQE+AKDSTSQPDMSKLL DQSFVSS
Sbjct: 301 MSMEDPASSHDVRDTEMSDAAI-DPELALALQLSVQEDAKDSTSQPDMSKLLADQSFVSS 360

Query: 361 ILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEDKPKEDED 388
           ILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNE+ P +++D
Sbjct: 361 ILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDD 401

[Close]

BLAST of Sed0019730 vs. NCBI nr
Match: XP_004146147.1 (26S proteasome non-ATPase regulatory subunit 4 homolog [Cucumis sativus] >KGN55653.1 hypothetical protein Csa_010449 [Cucumis sativus])

HSP 1 Score: 653.3 bits (1684), Expect = 1.3e-183
Identity = 363/404 (89.85%), Postives = 374/404 (92.57%), Query Frame = 0


Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAVNLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDYAPSRFQAQ+DAVNLICGAKTQSNPENTVGVLTMAGKGVR
Sbjct: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR 60

Query: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQHQRIIVFAGSPAKH 120
           VLVTPTSDLGKIL CMHGLEIGGETNLAAGIQVAQLALKHRQNKKQ QRIIVFAGSPA H
Sbjct: 61  VLVTPTSDLGKILACMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANH 120

Query: 121 DKKLLEMIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPIAL 180
           +KKLLEMIGKKLKKNNVALDIIDFGEEDD KPEKLEALLSAVNSNDSSHIVHVPSGP AL
Sbjct: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDAKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180

Query: 181 SDVLISTPIFTGDEEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR 240
           SDVLISTPIFTGD EGGSGFAAAAAAASAGG GFDFGVDPNLDPELALALRVSMEEERAR
Sbjct: 181 SDVLISTPIFTGDGEGGSGFAAAAAAASAGGGGFDFGVDPNLDPELALALRVSMEEERAR 240

Query: 241 QEAAAKKAADETSKQEKGGEQPSGSQDTTMNEQ---------------EDENTLLQQALA 300
           QEAAAK+AADETSKQEKGGEQPSGSQDTTMNE+               EDEN LLQQALA
Sbjct: 241 QEAAAKRAADETSKQEKGGEQPSGSQDTTMNERASAESSDAQKTSDPMEDENALLQQALA 300

Query: 301 MSMDDPGSSHEVHDTEMSDAAIDDPELALALQLSVQEEAKDSTSQPDMSKLLEDQSFVSS 360
           MSM+DP SS ++ DTEMSDAA+ DPELALALQLSVQEE+KDSTSQPDMSKLL DQSFVSS
Sbjct: 301 MSMEDPASS-DIRDTEMSDAAM-DPELALALQLSVQEESKDSTSQPDMSKLLADQSFVSS 360

Query: 361 ILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEDK-PKEDEDK 389
           ILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNE+  PKED+DK
Sbjct: 361 ILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDDDK 402

[Close]

BLAST of Sed0019730 vs. NCBI nr
Match: XP_008448534.1 (PREDICTED: 26S proteasome non-ATPase regulatory subunit 4 homolog [Cucumis melo] >KAA0052954.1 26S proteasome non-ATPase regulatory subunit 4-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 652.5 bits (1682), Expect = 2.3e-183
Identity = 360/403 (89.33%), Postives = 374/403 (92.80%), Query Frame = 0


Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAVNLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDYAPSRFQAQ+DAVNLICGAKTQSNPENTVGVLTMAGKGVR
Sbjct: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR 60

Query: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQHQRIIVFAGSPAKH 120
           VLVTPTSDLGKIL CMHGLEIGGETNLAAGIQVAQLALKHRQNKKQ QRIIVFAGSPA H
Sbjct: 61  VLVTPTSDLGKILACMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANH 120

Query: 121 DKKLLEMIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPIAL 180
           +KKLLEMIGKKLKKNNVALDIIDFGEEDD KPEKLEALLSAVNSNDSSHIVHVPSGP AL
Sbjct: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDAKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180

Query: 181 SDVLISTPIFTGDEEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR 240
           SDVLISTPIFTGD EGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR
Sbjct: 181 SDVLISTPIFTGDGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR 240

Query: 241 QEAAAKKAADETSKQEKGGEQPSGSQDTTMNEQ---------------EDENTLLQQALA 300
           QEAAAK+AA+ETSKQEKGGEQPSGSQDTTMNE+               EDEN LLQQALA
Sbjct: 241 QEAAAKRAAEETSKQEKGGEQPSGSQDTTMNERASAESSDAQKTNDPMEDENALLQQALA 300

Query: 301 MSMDDPGSSHEVHDTEMSDAAIDDPELALALQLSVQEEAKDSTSQPDMSKLLEDQSFVSS 360
           MSM+DP SS ++ DTEMSDAA+ DPELALALQLSVQEE+KDSTSQPDMSKLL DQSFVSS
Sbjct: 301 MSMEDPASS-DIRDTEMSDAAM-DPELALALQLSVQEESKDSTSQPDMSKLLADQSFVSS 360

Query: 361 ILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEDKPKEDEDK 389
           ILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNE+ P +++DK
Sbjct: 361 ILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDDK 401

[Close]

BLAST of Sed0019730 vs. ExPASy Swiss-Prot
Match: O82143 (26S proteasome non-ATPase regulatory subunit 4 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=RPN10 PE=1 SV=1)

HSP 1 Score: 507.7 bits (1306), Expect = 1.2e-142
Identity = 289/405 (71.36%), Postives = 328/405 (80.99%), Query Frame = 0


Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAVNLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDY+PSRFQAQ+DAVNLICGAKTQSNPENTVGV+TMAGKGVR
Sbjct: 1   MVLEATMICIDNSEWMRNGDYSPSRFQAQADAVNLICGAKTQSNPENTVGVMTMAGKGVR 60

Query: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQHQRIIVFAGSPAKH 120
           VLVTPTSDLGKIL CMHGLE+G E NLAA IQVAQLALKHRQNK+Q QRII F GSP K+
Sbjct: 61  VLVTPTSDLGKILACMHGLEVGAEANLAAAIQVAQLALKHRQNKRQQQRIIAFIGSPVKY 120

Query: 121 DKKLLEMIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPIAL 180
           DKK+LE IGKKLKKNNVALDI+DFGE DD KPEKLEAL+SAVNS+DSSHIVHVP G  AL
Sbjct: 121 DKKVLETIGKKLKKNNVALDIVDFGETDDDKPEKLEALISAVNSSDSSHIVHVPPGENAL 180

Query: 181 SDVLISTPIFTGDEEGGSGFAAAAAAASA-GGAGFDFGVDPNLDPELALALRVSMEEERA 240
           SDVLISTPIFTG EEGGSGFAA+AAAA+A G AGF+F VDPN+DPELALALR+SMEEERA
Sbjct: 181 SDVLISTPIFTG-EEGGSGFAASAAAAAATGAAGFEFDVDPNVDPELALALRLSMEEERA 240

Query: 241 RQEAAAKKAADETSKQEKGGEQPSGSQDTTMNE----------------QEDENTLLQQA 300
           RQEA AKKAA+E+S  E      S + D+ M E                ++D+  LLQQA
Sbjct: 241 RQEAIAKKAAEESSGAENKDHASSSNADSVMAEAEPASNAADDKKDQPKEDDDAQLLQQA 300

Query: 301 LAMSMDDPGSSHEVHDTEMSDAAIDDPELALALQLSVQEEAKDSTSQPDMSKLLEDQSFV 360
           LAMSM++  S     D  M++AA+DD +LALALQ+SVQ+     +SQ DMSK+ ED+SFV
Sbjct: 301 LAMSMEEGSSGAAAADAAMAEAAVDDQDLALALQMSVQDAG--GSSQSDMSKVFEDRSFV 360

Query: 361 SSILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEDKPKEDEDK 389
           +SIL SLPGVDPNDPSVKDLLAS+  Q + E K+++    EDE K
Sbjct: 361 TSILNSLPGVDPNDPSVKDLLASLHGQGEQEKKEDKSDKPEDEKK 402

[Close]

BLAST of Sed0019730 vs. ExPASy Swiss-Prot
Match: P55034 (26S proteasome non-ATPase regulatory subunit 4 homolog OS=Arabidopsis thaliana OX=3702 GN=RPN10 PE=1 SV=1)

HSP 1 Score: 471.1 bits (1211), Expect = 1.2e-131
Identity = 265/398 (66.58%), Postives = 324/398 (81.41%), Query Frame = 0


Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAVNLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDY+PSR QAQ++AVNL+CGAKTQSNPENTVG+LTMAGKGVR
Sbjct: 1   MVLEATMICIDNSEWMRNGDYSPSRLQAQTEAVNLLCGAKTQSNPENTVGILTMAGKGVR 60

Query: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQHQRIIVFAGSPAKH 120
           VL TPTSDLGKIL CMHGL++GGE NL A IQ+AQLALKHRQNK Q QRIIVFAGSP K+
Sbjct: 61  VLTTPTSDLGKILACMHGLDVGGEINLTAAIQIAQLALKHRQNKNQRQRIIVFAGSPIKY 120

Query: 121 DKKLLEMIGKKLKKNNVALDIIDFGEEDD-GKPEKLEALLSAVNSNDSSHIVHVPSGPIA 180
           +KK LE++GK+LKKN+V+LDI++FGE+DD  KP+KLEALL+AVN+ND SHIVHVPSG  A
Sbjct: 121 EKKALEIVGKRLKKNSVSLDIVNFGEDDDEEKPQKLEALLTAVNNNDGSHIVHVPSGANA 180

Query: 181 LSDVLISTPIFTGDEEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERA 240
           LSDVL+STP+FTGD EG SG+ +AAAAA+A G  FDFGVDPN+DPELALALRVSMEEERA
Sbjct: 181 LSDVLLSTPVFTGD-EGASGYVSAAAAAAAAGGDFDFGVDPNIDPELALALRVSMEEERA 240

Query: 241 RQEAAAKKAADETSKQEKGGEQPSGSQDT-------TMNEQEDENTLLQQALAMSMDDPG 300
           RQEAAAKKAADE  +++K G+  S SQ+T            ++++ LL QA+AMS     
Sbjct: 241 RQEAAAKKAADEAGQKDKDGDTASASQETVARTTDKNAEPMDEDSALLDQAIAMS----- 300

Query: 301 SSHEVHDTEMSDAAIDDPELALALQLSVQ-EEAKDSTSQPDMSKLLEDQSFVSSILASLP 360
               V D  MS+AA +D +LALALQ+S+  EE+ ++T     + LL +Q+F+SS+L+SLP
Sbjct: 301 ----VGDVNMSEAADEDQDLALALQMSMSGEESSEATGAG--NNLLGNQAFISSVLSSLP 360

Query: 361 GVDPNDPSVKDLLASMQSQSK-PEDKKNEDKPKEDEDK 389
           GVDPNDP+VK+LLAS+  +SK  E++++  K  EDE K
Sbjct: 361 GVDPNDPAVKELLASLPDESKRTEEEESSSKKGEDEKK 386

[Close]

BLAST of Sed0019730 vs. ExPASy Swiss-Prot
Match: Q58DA0 (26S proteasome non-ATPase regulatory subunit 4 OS=Bos taurus OX=9913 GN=PSMD4 PE=2 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 1.6e-67
Identity = 171/401 (42.64%), Postives = 247/401 (61.60%), Query Frame = 0


Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAVNLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLE+TM+C+DNSE+MRNGD+ P+R QAQ DAVN++C +KT+SNPEN VG++T+A     
Sbjct: 1   MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLA-NDCE 60

Query: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQHQRIIVFAGSPAKH 120
           VL T T D G+IL  +H ++  G+     GI+VA LALKHRQ K    RII F GSP + 
Sbjct: 61  VLTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVED 120

Query: 121 DKKLLEMIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSND--SSHIVHVPSGPI 180
           ++K L  + K+LKK  V +DII+FGEE +   EKL A ++ +N  D   SH+V VP GP 
Sbjct: 121 NEKDLVKLAKRLKKEKVNVDIINFGEE-EVNTEKLTAFVNTLNGKDGTGSHLVTVPPGP- 180

Query: 181 ALSDVLISTPIFTGDEEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEER 240
           +L+D LIS+PI  G  EGG       A    G + F+FGVDP+ DPELALALRVSMEE+R
Sbjct: 181 SLADALISSPILAG--EGG-------AMLGLGASDFEFGVDPSADPELALALRVSMEEQR 240

Query: 241 ARQEAAAKKAADETSKQEKGGEQPSGSQDT-------TMNEQEDENTLLQQALAMSMDDP 300
            RQE  A++AA   +   + G   +G++D+       T+++QE   T L    +M+ ++ 
Sbjct: 241 QRQEEEARRAA--AASAAEAGIATAGTEDSDDALLKMTISQQEFGRTGLPDLSSMTEEEQ 300

Query: 301 ---GSSHEVHDTEMSDAAIDDPELALALQLSVQEEAKDSTSQPDMSKLLEDQSFVSSILA 360
                   +   E   A   D + + A+  S      + T + D   +++D  F+ S+L 
Sbjct: 301 IAYAMQMSLQGAEFGQAESADMDASSAMDTS------EPTKEEDDYDVMQDPEFLQSVLE 360

Query: 361 SLPGVDPNDPSVKDLLASMQSQSKPE---DKKNEDKPKEDE 387
           +LPGVDPN+ ++++ + S+ SQ+  +   DKK EDK +ED+
Sbjct: 361 NLPGVDPNNEAIRNAMGSLASQATKDGKKDKKEEDKKEEDK 381

[Close]

BLAST of Sed0019730 vs. ExPASy Swiss-Prot
Match: Q553E0 (26S proteasome non-ATPase regulatory subunit 4 OS=Dictyostelium discoideum OX=44689 GN=psmD4 PE=2 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 1.4e-66
Identity = 170/399 (42.61%), Postives = 235/399 (58.90%), Query Frame = 0


Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAVNLICGAKTQSNPENTVGVLTMAGKGVR 60
           M LEAT++C+DNSEWMRNGD+ PSR +AQ DAVNLIC +KTQSNPE+ V +++MAGK   
Sbjct: 1   MTLEATIVCLDNSEWMRNGDFTPSRSEAQKDAVNLICASKTQSNPESAVSIMSMAGKKPE 60

Query: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQHQRIIVFAGSPAKH 120
           VLVT T +L KIL     L+I G+ + +  +Q+AQLAL+HRQN  QH RII F GSP K 
Sbjct: 61  VLVTLTQELSKILSGAQELKINGKIDFSTTMQIAQLALRHRQNNHQHPRIIAFVGSPLKE 120

Query: 121 DKKLLEMIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPIAL 180
            K+ L  + K+LKKN VA+DII+FGE  +   +KLEA ++ VN+ND SH++ VP GP  L
Sbjct: 121 TKEELIQLAKRLKKNGVAVDIINFGEVTENS-DKLEAFINDVNNNDESHLLTVPPGPHIL 180

Query: 181 SDVLISTPIFTGDEEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR 240
           SD+++ +PI     E GS           G  G +F ++ + DP+LA+AL++S+EEE+ R
Sbjct: 181 SDIILQSPIV----ESGS-----------GQFGSEF-INADTDPDLAMALKLSLEEEKQR 240

Query: 241 QEAAAKKAADETSKQEKGGEQPSGSQDTTMNEQEDENTLLQQALAMSMDDPGSSHEVHDT 300
           QE   +KA +E +    GG   SG+  TT   + + +   +                   
Sbjct: 241 QE-RERKAREEAN----GGSTNSGTTTTTAPTESNMDVNFE------------------- 300

Query: 301 EMSDAAIDDPELALALQLS-------VQEEAKDSTSQPDM-----------SKLLEDQSF 360
                  DDPELA AL LS       VQ    ++ SQP             S+  +DQ F
Sbjct: 301 -------DDPELAEALALSMATDKMEVQSSTTNTDSQPPQQQQQPPTDDTSSEAFKDQDF 349

Query: 361 VSSILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEDK 382
           ++S L SLPGVDPN   +K+ L ++  + + +DK NE K
Sbjct: 361 LNSTLNSLPGVDPN--RIKNALENLSKKDEDKDKDNEKK 349

[Close]

BLAST of Sed0019730 vs. ExPASy Swiss-Prot
Match: P55036 (26S proteasome non-ATPase regulatory subunit 4 OS=Homo sapiens OX=9606 GN=PSMD4 PE=1 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 6.8e-66
Identity = 171/398 (42.96%), Postives = 246/398 (61.81%), Query Frame = 0


Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAVNLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLE+TM+C+DNSE+MRNGD+ P+R QAQ DAVN++C +KT+SNPEN VG++T+A     
Sbjct: 1   MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLA-NDCE 60

Query: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQHQRIIVFAGSPAKH 120
           VL T T D G+IL  +H ++  G+     GI+VA LALKHRQ K    RII F GSP + 
Sbjct: 61  VLTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVED 120

Query: 121 DKKLLEMIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSND--SSHIVHVPSGPI 180
           ++K L  + K+LKK  V +DII+FGEE +   EKL A ++ +N  D   SH+V VP GP 
Sbjct: 121 NEKDLVKLAKRLKKEKVNVDIINFGEE-EVNTEKLTAFVNTLNGKDGTGSHLVTVPPGP- 180

Query: 181 ALSDVLISTPIFTGDEEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEER 240
           +L+D LIS+PI  G  EGG       A    G + F+FGVDP+ DPELALALRVSMEE+R
Sbjct: 181 SLADALISSPILAG--EGG-------AMLGLGASDFEFGVDPSADPELALALRVSMEEQR 240

Query: 241 ARQEAAAKKAADETSKQEKGGEQPSGSQDT-------TMNEQEDENTLLQQALAMSMDDP 300
            RQE  A++AA   +   + G   +G++D+       T+++QE   T L    +M+ ++ 
Sbjct: 241 QRQEEEARRAA--AASAAEAGIATTGTEDSDDALLKMTISQQEFGRTGLPDLSSMTEEEQ 300

Query: 301 ---GSSHEVHDTEMSDAAIDDPELALALQLSVQEEAKDSTSQPDMSKLLEDQSFVSSILA 360
                   +   E   A   D + + A+  S  E AK+     D   +++D  F+ S+L 
Sbjct: 301 IAYAMQMSLQGAEFGQAESADIDASSAMDTS--EPAKEE----DDYDVMQDPEFLQSVLE 360

Query: 361 SLPGVDPNDPSVKDLLASMQSQSKPEDKKNEDKPKEDE 387
           +LPGVDPN+ ++++ + S+ SQ+  + KK  DK +ED+
Sbjct: 361 NLPGVDPNNEAIRNAMGSLASQATKDGKK--DKKEEDK 376

[Close]

BLAST of Sed0019730 vs. ExPASy TrEMBL
Match: A0A6J1HL78 (26S proteasome non-ATPase regulatory subunit 4 homolog OS=Cucurbita maxima OX=3661 GN=LOC111465178 PE=3 SV=1)

HSP 1 Score: 653.3 bits (1684), Expect = 6.4e-184
Identity = 358/402 (89.05%), Postives = 371/402 (92.29%), Query Frame = 0


Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAVNLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDYAPSRFQAQ+DAVNLICGAKTQSNPENTVGVLTMAGKGVR
Sbjct: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR 60

Query: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQHQRIIVFAGSPAKH 120
           VLVTPTSDLGKIL CMHGLE+GGETNLAAGIQVAQLALKHRQNKKQ QRIIVFAGSPA H
Sbjct: 61  VLVTPTSDLGKILACMHGLELGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANH 120

Query: 121 DKKLLEMIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPIAL 180
           DKKLLE IGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGP AL
Sbjct: 121 DKKLLETIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180

Query: 181 SDVLISTPIFTGDEEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR 240
           SDVLISTPIFTGD EGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR
Sbjct: 181 SDVLISTPIFTGDGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR 240

Query: 241 QEAAAKKAADETSKQEKGGEQPSGSQDTTMNEQ---------------EDENTLLQQALA 300
           QE AAKKAA+ETSKQEKG  QPSGSQDTTMNE+               +D+N LLQQALA
Sbjct: 241 QETAAKKAAEETSKQEKGEAQPSGSQDTTMNERASAETSDAQKTSDPMDDDNALLQQALA 300

Query: 301 MSMDDPGSSHEVHDTEMSDAAIDDPELALALQLSVQEEAKDSTSQPDMSKLLEDQSFVSS 360
           MSM+DP SSH+V DTEMSDAAI DPELALALQLSVQE+AKDSTSQPDMSKLL DQSFVSS
Sbjct: 301 MSMEDPASSHDVRDTEMSDAAI-DPELALALQLSVQEDAKDSTSQPDMSKLLADQSFVSS 360

Query: 361 ILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEDKPKEDED 388
           ILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNE+ P +++D
Sbjct: 361 ILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDD 401

[Close]

BLAST of Sed0019730 vs. ExPASy TrEMBL
Match: A0A0A0L1M0 (VWFA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002730 PE=3 SV=1)

HSP 1 Score: 653.3 bits (1684), Expect = 6.4e-184
Identity = 363/404 (89.85%), Postives = 374/404 (92.57%), Query Frame = 0


Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAVNLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDYAPSRFQAQ+DAVNLICGAKTQSNPENTVGVLTMAGKGVR
Sbjct: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR 60

Query: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQHQRIIVFAGSPAKH 120
           VLVTPTSDLGKIL CMHGLEIGGETNLAAGIQVAQLALKHRQNKKQ QRIIVFAGSPA H
Sbjct: 61  VLVTPTSDLGKILACMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANH 120

Query: 121 DKKLLEMIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPIAL 180
           +KKLLEMIGKKLKKNNVALDIIDFGEEDD KPEKLEALLSAVNSNDSSHIVHVPSGP AL
Sbjct: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDAKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180

Query: 181 SDVLISTPIFTGDEEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR 240
           SDVLISTPIFTGD EGGSGFAAAAAAASAGG GFDFGVDPNLDPELALALRVSMEEERAR
Sbjct: 181 SDVLISTPIFTGDGEGGSGFAAAAAAASAGGGGFDFGVDPNLDPELALALRVSMEEERAR 240

Query: 241 QEAAAKKAADETSKQEKGGEQPSGSQDTTMNEQ---------------EDENTLLQQALA 300
           QEAAAK+AADETSKQEKGGEQPSGSQDTTMNE+               EDEN LLQQALA
Sbjct: 241 QEAAAKRAADETSKQEKGGEQPSGSQDTTMNERASAESSDAQKTSDPMEDENALLQQALA 300

Query: 301 MSMDDPGSSHEVHDTEMSDAAIDDPELALALQLSVQEEAKDSTSQPDMSKLLEDQSFVSS 360
           MSM+DP SS ++ DTEMSDAA+ DPELALALQLSVQEE+KDSTSQPDMSKLL DQSFVSS
Sbjct: 301 MSMEDPASS-DIRDTEMSDAAM-DPELALALQLSVQEESKDSTSQPDMSKLLADQSFVSS 360

Query: 361 ILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEDK-PKEDEDK 389
           ILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNE+  PKED+DK
Sbjct: 361 ILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDDDK 402

[Close]

BLAST of Sed0019730 vs. ExPASy TrEMBL
Match: A0A5A7UCD1 (26S proteasome non-ATPase regulatory subunit 4-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold344G00630 PE=3 SV=1)

HSP 1 Score: 652.5 bits (1682), Expect = 1.1e-183
Identity = 360/403 (89.33%), Postives = 374/403 (92.80%), Query Frame = 0


Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAVNLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDYAPSRFQAQ+DAVNLICGAKTQSNPENTVGVLTMAGKGVR
Sbjct: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR 60

Query: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQHQRIIVFAGSPAKH 120
           VLVTPTSDLGKIL CMHGLEIGGETNLAAGIQVAQLALKHRQNKKQ QRIIVFAGSPA H
Sbjct: 61  VLVTPTSDLGKILACMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANH 120

Query: 121 DKKLLEMIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPIAL 180
           +KKLLEMIGKKLKKNNVALDIIDFGEEDD KPEKLEALLSAVNSNDSSHIVHVPSGP AL
Sbjct: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDAKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180

Query: 181 SDVLISTPIFTGDEEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR 240
           SDVLISTPIFTGD EGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR
Sbjct: 181 SDVLISTPIFTGDGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR 240

Query: 241 QEAAAKKAADETSKQEKGGEQPSGSQDTTMNEQ---------------EDENTLLQQALA 300
           QEAAAK+AA+ETSKQEKGGEQPSGSQDTTMNE+               EDEN LLQQALA
Sbjct: 241 QEAAAKRAAEETSKQEKGGEQPSGSQDTTMNERASAESSDAQKTNDPMEDENALLQQALA 300

Query: 301 MSMDDPGSSHEVHDTEMSDAAIDDPELALALQLSVQEEAKDSTSQPDMSKLLEDQSFVSS 360
           MSM+DP SS ++ DTEMSDAA+ DPELALALQLSVQEE+KDSTSQPDMSKLL DQSFVSS
Sbjct: 301 MSMEDPASS-DIRDTEMSDAAM-DPELALALQLSVQEESKDSTSQPDMSKLLADQSFVSS 360

Query: 361 ILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEDKPKEDEDK 389
           ILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNE+ P +++DK
Sbjct: 361 ILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDDK 401

[Close]

BLAST of Sed0019730 vs. ExPASy TrEMBL
Match: A0A1S3BKI9 (26S proteasome non-ATPase regulatory subunit 4 homolog OS=Cucumis melo OX=3656 GN=LOC103490683 PE=3 SV=1)

HSP 1 Score: 652.5 bits (1682), Expect = 1.1e-183
Identity = 360/403 (89.33%), Postives = 374/403 (92.80%), Query Frame = 0


Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAVNLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDYAPSRFQAQ+DAVNLICGAKTQSNPENTVGVLTMAGKGVR
Sbjct: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR 60

Query: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQHQRIIVFAGSPAKH 120
           VLVTPTSDLGKIL CMHGLEIGGETNLAAGIQVAQLALKHRQNKKQ QRIIVFAGSPA H
Sbjct: 61  VLVTPTSDLGKILACMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANH 120

Query: 121 DKKLLEMIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPIAL 180
           +KKLLEMIGKKLKKNNVALDIIDFGEEDD KPEKLEALLSAVNSNDSSHIVHVPSGP AL
Sbjct: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDAKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180

Query: 181 SDVLISTPIFTGDEEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR 240
           SDVLISTPIFTGD EGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR
Sbjct: 181 SDVLISTPIFTGDGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR 240

Query: 241 QEAAAKKAADETSKQEKGGEQPSGSQDTTMNEQ---------------EDENTLLQQALA 300
           QEAAAK+AA+ETSKQEKGGEQPSGSQDTTMNE+               EDEN LLQQALA
Sbjct: 241 QEAAAKRAAEETSKQEKGGEQPSGSQDTTMNERASAESSDAQKTNDPMEDENALLQQALA 300

Query: 301 MSMDDPGSSHEVHDTEMSDAAIDDPELALALQLSVQEEAKDSTSQPDMSKLLEDQSFVSS 360
           MSM+DP SS ++ DTEMSDAA+ DPELALALQLSVQEE+KDSTSQPDMSKLL DQSFVSS
Sbjct: 301 MSMEDPASS-DIRDTEMSDAAM-DPELALALQLSVQEESKDSTSQPDMSKLLADQSFVSS 360

Query: 361 ILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEDKPKEDEDK 389
           ILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNE+ P +++DK
Sbjct: 361 ILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDDK 401

[Close]

BLAST of Sed0019730 vs. ExPASy TrEMBL
Match: A0A5D3CJ53 (26S proteasome non-ATPase regulatory subunit 4-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00640 PE=3 SV=1)

HSP 1 Score: 649.8 bits (1675), Expect = 7.1e-183
Identity = 358/403 (88.83%), Postives = 373/403 (92.56%), Query Frame = 0


Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAVNLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDYAPSRFQAQ+DAVNLICGAKTQSNPENTVGVLTMAGKGVR
Sbjct: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR 60

Query: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQHQRIIVFAGSPAKH 120
           VLVTPTSDLGKIL CMHGLEIGGETNLAAGIQVAQLALKHRQNKKQ QRIIVFAGSPA H
Sbjct: 61  VLVTPTSDLGKILACMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANH 120

Query: 121 DKKLLEMIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPIAL 180
           +KKLLEMIGKKLKKNNVALDIIDFGEEDD KPEKLEALLSAVNSNDSSHIVHVPSGP AL
Sbjct: 121 EKKLLEMIGKKLKKNNVALDIIDFGEEDDAKPEKLEALLSAVNSNDSSHIVHVPSGPNAL 180

Query: 181 SDVLISTPIFTGDEEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR 240
           SDVLISTPIFTGD EGGSGF AAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR
Sbjct: 181 SDVLISTPIFTGDGEGGSGFVAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERAR 240

Query: 241 QEAAAKKAADETSKQEKGGEQPSGSQDTTMNEQ---------------EDENTLLQQALA 300
           QEAAAK+AA+ETSKQEKGGEQPSGSQDTTMNE+               EDEN LLQQALA
Sbjct: 241 QEAAAKRAAEETSKQEKGGEQPSGSQDTTMNERASAESSDAQKTNDPMEDENALLQQALA 300

Query: 301 MSMDDPGSSHEVHDTEMSDAAIDDPELALALQLSVQEEAKDSTSQPDMSKLLEDQSFVSS 360
           MSM+DP SS ++ DTEMSDAA+ DPELALALQLSVQEE+KDST+QPDMSKLL DQSFVSS
Sbjct: 301 MSMEDPASS-DIRDTEMSDAAM-DPELALALQLSVQEESKDSTNQPDMSKLLADQSFVSS 360

Query: 361 ILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEDKPKEDEDK 389
           ILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNE+ P +++DK
Sbjct: 361 ILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDDK 401

[Close]

BLAST of Sed0019730 vs. TAIR 10
Match: AT4G38630.1 (regulatory particle non-ATPase 10 )

HSP 1 Score: 471.1 bits (1211), Expect = 8.7e-133
Identity = 265/398 (66.58%), Postives = 324/398 (81.41%), Query Frame = 0


Query: 1   MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAVNLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDY+PSR QAQ++AVNL+CGAKTQSNPENTVG+LTMAGKGVR
Sbjct: 1   MVLEATMICIDNSEWMRNGDYSPSRLQAQTEAVNLLCGAKTQSNPENTVGILTMAGKGVR 60

Query: 61  VLVTPTSDLGKILGCMHGLEIGGETNLAAGIQVAQLALKHRQNKKQHQRIIVFAGSPAKH 120
           VL TPTSDLGKIL CMHGL++GGE NL A IQ+AQLALKHRQNK Q QRIIVFAGSP K+
Sbjct: 61  VLTTPTSDLGKILACMHGLDVGGEINLTAAIQIAQLALKHRQNKNQRQRIIVFAGSPIKY 120

Query: 121 DKKLLEMIGKKLKKNNVALDIIDFGEEDD-GKPEKLEALLSAVNSNDSSHIVHVPSGPIA 180
           +KK LE++GK+LKKN+V+LDI++FGE+DD  KP+KLEALL+AVN+ND SHIVHVPSG  A
Sbjct: 121 EKKALEIVGKRLKKNSVSLDIVNFGEDDDEEKPQKLEALLTAVNNNDGSHIVHVPSGANA 180

Query: 181 LSDVLISTPIFTGDEEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERA 240
           LSDVL+STP+FTGD EG SG+ +AAAAA+A G  FDFGVDPN+DPELALALRVSMEEERA
Sbjct: 181 LSDVLLSTPVFTGD-EGASGYVSAAAAAAAAGGDFDFGVDPNIDPELALALRVSMEEERA 240

Query: 241 RQEAAAKKAADETSKQEKGGEQPSGSQDT-------TMNEQEDENTLLQQALAMSMDDPG 300
           RQEAAAKKAADE  +++K G+  S SQ+T            ++++ LL QA+AMS     
Sbjct: 241 RQEAAAKKAADEAGQKDKDGDTASASQETVARTTDKNAEPMDEDSALLDQAIAMS----- 300

Query: 301 SSHEVHDTEMSDAAIDDPELALALQLSVQ-EEAKDSTSQPDMSKLLEDQSFVSSILASLP 360
               V D  MS+AA +D +LALALQ+S+  EE+ ++T     + LL +Q+F+SS+L+SLP
Sbjct: 301 ----VGDVNMSEAADEDQDLALALQMSMSGEESSEATGAG--NNLLGNQAFISSVLSSLP 360

Query: 361 GVDPNDPSVKDLLASMQSQSK-PEDKKNEDKPKEDEDK 389
           GVDPNDP+VK+LLAS+  +SK  E++++  K  EDE K
Sbjct: 361 GVDPNDPAVKELLASLPDESKRTEEEESSSKKGEDEKK 386

The following BLAST results are available for this feature:

BLAST of Sed0019730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876565.1	2.0e-184	89.85	26S proteasome non-ATPase regulatory subunit 4 homolog [Benincasa hispida]	[more]
XP_023553520.1	3.5e-184	89.60	26S proteasome non-ATPase regulatory subunit 4 homolog [Cucurbita pepo subsp. pe...	[more]
XP_022965261.1	1.3e-183	89.05	26S proteasome non-ATPase regulatory subunit 4 homolog [Cucurbita maxima]	[more]
XP_004146147.1	1.3e-183	89.85	26S proteasome non-ATPase regulatory subunit 4 homolog [Cucumis sativus] >KGN556...	[more]
XP_008448534.1	2.3e-183	89.33	PREDICTED: 26S proteasome non-ATPase regulatory subunit 4 homolog [Cucumis melo]...	[more]

BLAST of Sed0019730 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82143	1.2e-142	71.36	26S proteasome non-ATPase regulatory subunit 4 homolog OS=Oryza sativa subsp. ja...	[more]
P55034	1.2e-131	66.58	26S proteasome non-ATPase regulatory subunit 4 homolog OS=Arabidopsis thaliana O...	[more]
Q58DA0	1.6e-67	42.64	26S proteasome non-ATPase regulatory subunit 4 OS=Bos taurus OX=9913 GN=PSMD4 PE...	[more]
Q553E0	1.4e-66	42.61	26S proteasome non-ATPase regulatory subunit 4 OS=Dictyostelium discoideum OX=44...	[more]
P55036	6.8e-66	42.96	26S proteasome non-ATPase regulatory subunit 4 OS=Homo sapiens OX=9606 GN=PSMD4 ...	[more]

BLAST of Sed0019730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HL78	6.4e-184	89.05	26S proteasome non-ATPase regulatory subunit 4 homolog OS=Cucurbita maxima OX=36...	[more]
A0A0A0L1M0	6.4e-184	89.85	VWFA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002730 PE=3 S...	[more]
A0A5A7UCD1	1.1e-183	89.33	26S proteasome non-ATPase regulatory subunit 4-like protein OS=Cucumis melo var....	[more]
A0A1S3BKI9	1.1e-183	89.33	26S proteasome non-ATPase regulatory subunit 4 homolog OS=Cucumis melo OX=3656 G...	[more]
A0A5D3CJ53	7.1e-183	88.83	26S proteasome non-ATPase regulatory subunit 4-like protein OS=Cucumis melo var....	[more]

BLAST of Sed0019730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38630.1	8.7e-133	66.58	regulatory particle non-ATPase 10	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 231..251
None	No IPR available	GENE3D	1.10.287.3990		coord: 219..293 e-value: 4.6E-20 score: 74.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 372..388
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 348..388
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 288..310
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 258..274
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 239..274
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 239..257
None	No IPR available	PANTHER	PTHR10223:SF6	26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4 HOMOLOG ISOFORM X1	coord: 1..388
None	No IPR available	PANTHER	PTHR10223	26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4	coord: 1..388
None	No IPR available	CDD	cd01452	VWA_26S_proteasome_subunit	coord: 1..188 e-value: 3.0374E-108 score: 313.917
IPR003903	Ubiquitin interacting motif	SMART	SM00726	uim	coord: 221..240 e-value: 11.0 score: 14.9 coord: 275..294 e-value: 10.0 score: 15.0 coord: 307..326 e-value: 0.16 score: 21.0
IPR003903	Ubiquitin interacting motif	PFAM	PF02809	UIM	coord: 223..236 e-value: 0.75 score: 9.8 coord: 275..289 e-value: 0.047 score: 13.6 coord: 308..322 e-value: 0.14 score: 12.1
IPR003903	Ubiquitin interacting motif	PROSITE	PS50330	UIM	coord: 221..240 score: 8.934976
IPR003903	Ubiquitin interacting motif	PROSITE	PS50330	UIM	coord: 308..326 score: 8.878815
IPR002035	von Willebrand factor, type A	SMART	SM00327	VWA_4	coord: 2..175 e-value: 1.0E-12 score: 58.2
IPR002035	von Willebrand factor, type A	PFAM	PF13519	VWA_2	coord: 6..114 e-value: 5.1E-27 score: 94.6
IPR002035	von Willebrand factor, type A	PROSITE	PS50234	VWFA	coord: 5..189 score: 11.397548
IPR036465	von Willebrand factor A-like domain superfamily	GENE3D	3.40.50.410	von Willebrand factor, type A domain	coord: 3..186 e-value: 1.7E-79 score: 267.7
IPR036465	von Willebrand factor A-like domain superfamily	SUPERFAMILY	53300	vWA-like	coord: 4..169

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0019730.1	Sed0019730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
cellular_component	GO:0008540	proteasome regulatory particle, base subcomplex
molecular_function	GO:0031593	polyubiquitin modification-dependent protein binding