Sed0019726 (gene) Chayote v1

Overview


Name	Sed0019726
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Rho GTPase-activating gacO-like protein
Location	LG08: 17511179 .. 17514393 (-)
RNA-Seq Expression	Sed0019726
Synteny	Sed0019726

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACGGACACGCCTCGGTATACAATGAACTTTTGATTCAAAACTTTCACGTTCTATCAACAAATATCTCTTTGTTTTACGCTTGTTCTTCTTTTCTCTCTCTTTCTGATTCATATGGGCAGGGCTTTAAGTGGCTTTCCCCACCGTTTCCTATATCCCAATCCTTCTTAAATCCTCATTTCATTTTTCAATTTCAATCCCCCCTTCTTCAGGTCATATTGTTTATGCCTCTCAAATCTTCATCTCTTTTTGCCCTTTGTTCTCTTCAATCCACCAACACCCACATGAATCTTTTCCTGTTTTCGTGACTTTCTTTTGATTCTTCAACAGATTTCCTGTAATGGGTTCTTCCCTATGATTCATATGGTGGTGGGCTGAGTTTCTTATCAGGTTTTTCCCTCGTTTCTCTGCTTCTTTTTCTTGTTTTGTTTTATGGGTCTTCTTCTTTTGTGTTTTTGTTGCCTCTGAAATTGATTTTGTTTGTCGATTAACTGTTCTTATTGCTCTATTCTTGCTTTCCCTCTATCCGATTCTGATGCTTTTTGTTGGATCTTGTTTGTCTTTGTTGCTGGGGTTTTTAGCGTTTTTGTTGTAGCTTTCTCTGTCGATTCTGATATTTGTTTGGGTTCTGGGAGAATCTTGTTGTTTCGAATTGGGTTTTTGTTCTTTTTGTGATTGAGCTTTGTGATTCTGTTTAATCTACTTTTTTATGCGATTTGTGTTGAGGGGTGGGTTCAAGAACTAGAGAAATTTTGATTTTCCCCTCTGTAGCTTTTCTGAATGGACTGATTTGCTAGCTATATCTTATTTTGTTACTTACTTTTGTATTTGATCGTGTTTTCTTATCTCTTGGGAAATGGCTTTCTGTGTTCTGTTAGTCTGCCTAATATCGGGTAAGTCAACTTAAGTTTGAGAAATTTTGTCCAAATTTAGCCTACTTGAGTGTTGCTAGTAAGTAAACATCCCATATGAGCTTCTACTTTGCTTTGTCCAAAAGCTTAAGTTTCCCCTTCTAGTTGTAGAGTACATGGGGAATTCTAACCTTCAAACTTCTAGGAAGGTTAGTAGTGTTTTGATCATAGAGATATGCTAGTCTAGGCTCTAGGTTAGAGCATGTTTAATCTTGGTTATATACTTTTCAATACTTCCCTCACATGTAGAGATGTACAAAAAACCAACAACCCAAACAACCTAGACCATAAACCCAAACCGTAAGTGTTGAGTTGGGTTATAATTTTCTTTGGATTGGGTTGAGTCGGTTCTTGGGTTGGTCAATTTTTGGCTCATTTTAACTCAATCCAACCTGAACTAAGAAGAATATTATGTATATGTGTGCAAAATAAATTAATAAAATAGGTTATTAGCTTATTAGTAAGAAGCATGCACTAACACGATTAGTATTTTCTTCAAATTTATAGGTTATAGGTTGGACTTTAAAGACTCTAGTGGAGTTGTTTACAACCTGATAGCCAACCTAGCCCAAGTAAAAAATATATGGGTTGAGTTGGGTTGTTTTAATACATTGGTTAGGCGGATTGATCAACTCAAAAATTTGGGTTGATCAAAAAATTTCTCCTAACTGAACTCAACTTGGACCATGTACAGCCCTACTCACAAATGAACTTGTAATATCACTCAATGAGGAGAAAATTTCCCAACCTATGTATTGTTGATGTTGTAAAAAAATCAATTATGAGGAAATGTTAGTGTAGGGATTTAAACTTATAATGTCCAAACATTGAACTCGAAATTATAAGTTTAATTGGTAATTAAGTTCGAGTATATTCAATCTGTAGTACCCTTAATGCTTCCTATATGTGTTGACATGAATATTGGTTTGATTTTCGATGCCTAACATGAGAAATATTGACATCAAGTAAAGAATGACATTATAAAAATTCAAACCTTGAAAGTCACATTTCCATACTATGTTAAATCATGGTGTTTTTAATCTTTTATATCTATTGTTTGATGTGTGTTCCTTTCCTGATTTAAGACAGAAGAACTTGTGATGAAGCTTGATATATTTGTCCTTTTTCTGGGTTGCTTGACCTGTAATTTGCCTACTGTCATTCAGTTTTGTTCAGGTTTCTTTCTTTTCATTCCAAAATATCAAGGGTCTAATTTACTGGTCAGTTTTAATCCTTACAAAAGTTTAAGTTTGATGAAGTATTATATATTACATCAGATGCTTCATCCTTGATGTATAACCATCAGTTGAATACGATATTCGAGCATGCTGCATTTTTCTACTTCACTGGGTTTCTTATTATAAGAGAATTGAAATTGTTTCCCATGTAATTGCTTTAAACTTCTTCTGTGCCTAGCAGTGGCCATCTGTTGCGTGATTGTTTTACGTTCTGAGAATTCTCAAAGAGGATGGGTAGAGGTCGAGGAAAGGGGAGGAGACTGACTGTCACGAGTCATGATGATGCTGGAAGTGGTGAGGAAGAGAAGATTCCTGCACAAAAGCGGAGGGGAAGGCCACAGAAGCCATTGAAGGACGGAATTGACGAGGAAGAAGCTGAAATGATAGAAGACAACGACATTGAGAACCTGAAAGGCAGTGAAATTGTGATCAAGGAGATGACAGGCCCCCTTGCAGCAGAGAATGGGAAAAGGAGGAGAAGAAACTCACAGGTGAAAGAAAAGCTCGATCCAGTGAAGGACGAAAATGGGGACGCGACACAGCCAAACACTGATGTATCAACCAGATCAAATGGATTTCGGCACTATGGAAGCAGGCGAAAAAGCAAGCCCCATCGAGCTGCTGAAGCGGGCGTTAACTGCAAGTGAAGCAACTTTGAAAGAATATGGTTTTCTTACTGAAGGAGCAGATAAATTTTCAAGGAAGAAAATGAGGGATAGAGATTTTCTAGATTACCATATTATCTGTTCTCAATCTCATCTTATAACTATTTTCCATCACCATTCCTTTTCTTATTTCTAAAAGAATAGTTGAATTGAGGATTCACTCTGCTGGTTCTAGTGGTCATTTTTGCTTTACTTCCATTTTTGAAATTTTTTACTATTTTATTTTATCCACATTATGCTCTTTAACAGGAAGGTATCTTCTTGCTCCATTACAACAGAAGCTAACTAAGAATCTAGTGAATCAATACTCTTTACAATTGCTGCTTATAAATACTGTCTTCCAAACTTCACATCTAAGCTCTATCCACTACATATTTGTGAACTCGAATTTGAGAGACAATAA

mRNA sequence

CACGGACACGCCTCGGTATACAATGAACTTTTGATTCAAAACTTTCACGTTCTATCAACAAATATCTCTTTGTTTTACGCTTGTTCTTCTTTTCTCTCTCTTTCTGATTCATATGGGCAGGGCTTTAAGTGGCTTTCCCCACCGTTTCCTATATCCCAATCCTTCTTAAATCCTCATTTCATTTTTCAATTTCAATCCCCCCTTCTTCAGGTCATATTGTTTATGCCTCTCAAATCTTCATCTCTTTTTGCCCTTTGTTCTCTTCAATCCACCAACACCCACATGAATCTTTTCCTGTTTTCGTGACTTTCTTTTGATTCTTCAACAGATTTCCTGTAATGGGTTCTTCCCTATGATTCATATGGTGGTGGGCTGAGTTTCTTATCAGTGGCCATCTGTTGCGTGATTGTTTTACGTTCTGAGAATTCTCAAAGAGGATGGGTAGAGGTCGAGGAAAGGGGAGGAGACTGACTGTCACGAGTCATGATGATGCTGGAAGTGGTGAGGAAGAGAAGATTCCTGCACAAAAGCGGAGGGGAAGGCCACAGAAGCCATTGAAGGACGGAATTGACGAGGAAGAAGCTGAAATGATAGAAGACAACGACATTGAGAACCTGAAAGGCAGTGAAATTGTGATCAAGGAGATGACAGGCCCCCTTGCAGCAGAGAATGGGAAAAGGAGGAGAAGAAACTCACAGGTGAAAGAAAAGCTCGATCCAGTGAAGGACGAAAATGGGGACGCGACACAGCCAAACACTGATGTATCAACCAGATCAAATGGATTTCGGCACTATGGAAGCAGGCGAAAAAGCAAGCCCCATCGAGCTGCTGAAGCGGGCGTTAACTGCAAGTGAAGCAACTTTGAAAGAATATGGTTTTCTTACTGAAGGAGCAGATAAATTTTCAAGGAAGAAAATGAGGGATAGAGATTTTCTAGATTACCATATTATCTGTTCTCAATCTCATCTTATAACTATTTTCCATCACCATTCCTTTTCTTATTTCTAAAAGAATAGTTGAATTGAGGATTCACTCTGCTGGTTCTAGTGGTCATTTTTGCTTTACTTCCATTTTTGAAATTTTTTACTATTTTATTTTATCCACATTATGCTCTTTAACAGGAAGGTATCTTCTTGCTCCATTACAACAGAAGCTAACTAAGAATCTAGTGAATCAATACTCTTTACAATTGCTGCTTATAAATACTGTCTTCCAAACTTCACATCTAAGCTCTATCCACTACATATTTGTGAACTCGAATTTGAGAGACAATAA

Coding sequence (CDS)

ATGGGTAGAGGTCGAGGAAAGGGGAGGAGACTGACTGTCACGAGTCATGATGATGCTGGAAGTGGTGAGGAAGAGAAGATTCCTGCACAAAAGCGGAGGGGAAGGCCACAGAAGCCATTGAAGGACGGAATTGACGAGGAAGAAGCTGAAATGATAGAAGACAACGACATTGAGAACCTGAAAGGCAGTGAAATTGTGATCAAGGAGATGACAGGCCCCCTTGCAGCAGAGAATGGGAAAAGGAGGAGAAGAAACTCACAGGTGAAAGAAAAGCTCGATCCAGTGAAGGACGAAAATGGGGACGCGACACAGCCAAACACTGATGTATCAACCAGATCAAATGGATTTCGGCACTATGGAAGCAGGCGAAAAAGCAAGCCCCATCGAGCTGCTGAAGCGGGCGTTAACTGCAAGTGA

Protein sequence

MGRGRGKGRRLTVTSHDDAGSGEEEKIPAQKRRGRPQKPLKDGIDEEEAEMIEDNDIENLKGSEIVIKEMTGPLAAENGKRRRRNSQVKEKLDPVKDENGDATQPNTDVSTRSNGFRHYGSRRKSKPHRAAEAGVNCK

Homology

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BLAST of Sed0019726 vs. NCBI nr
Match: XP_038879962.1 (uncharacterized protein LOC120071662 [Benincasa hispida])

HSP 1 Score: 227.6 bits (579), Expect = 6.4e-56
Identity = 119/138 (86.23%), Postives = 124/138 (89.86%), Query Frame = 0


Query: 1   MGRGRGKGRRLTVTSHDDAGSGEEEKIPAQKRRGRPQKPLKDGIDEEEAEMIEDNDIENL 60
           MGRGRGKGR+LTVT+HDDAGSGEEEKIP QKRRGRPQKPLKD IDEEEAE IED D ENL
Sbjct: 1   MGRGRGKGRKLTVTNHDDAGSGEEEKIPVQKRRGRPQKPLKDEIDEEEAEKIEDEDSENL 60

Query: 61  KGSEIVIKEMTGPLAAENGKRRRRNSQVKEKLDPVKDENGDATQPNTDVSTRSNGFRHYG 120
           KGS+IV KEM  P AAENGKRRRRNSQVKEKLDPVKDENGD T+ +TD STRSNGFRH G
Sbjct: 61  KGSDIVSKEMKSPPAAENGKRRRRNSQVKEKLDPVKDENGDGTRSSTDESTRSNGFRHNG 120

Query: 121 SRRKSKPHRAAEAGVNCK 139
           SRRKSKP RAAEAGVNCK
Sbjct: 121 SRRKSKPRRAAEAGVNCK 138

[Close]

BLAST of Sed0019726 vs. NCBI nr
Match: XP_004149029.1 (uncharacterized protein LOC101218566 [Cucumis sativus] >XP_004149030.1 uncharacterized protein LOC101218566 [Cucumis sativus] >XP_008451134.1 PREDICTED: uncharacterized protein LOC103492511 [Cucumis melo] >XP_008451135.1 PREDICTED: uncharacterized protein LOC103492511 [Cucumis melo] >XP_031745743.1 uncharacterized protein LOC101218566 [Cucumis sativus] >KAA0042286.1 uncharacterized protein E6C27_scaffold824G00790 [Cucumis melo var. makuwa] >KGN66448.1 hypothetical protein Csa_007243 [Cucumis sativus])

HSP 1 Score: 227.3 bits (578), Expect = 8.3e-56
Identity = 119/138 (86.23%), Postives = 125/138 (90.58%), Query Frame = 0


Query: 1   MGRGRGKGRRLTVTSHDDAGSGEEEKIPAQKRRGRPQKPLKDGIDEEEAEMIEDNDIENL 60
           MGRGRGKGR+LTVT+HDDAGSGEEEKIPAQKRRGRPQKPLKD IDEEEAE IED D ENL
Sbjct: 1   MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENL 60

Query: 61  KGSEIVIKEMTGPLAAENGKRRRRNSQVKEKLDPVKDENGDATQPNTDVSTRSNGFRHYG 120
           KGS+IV KEM  P AAENGKRRRRNSQVKEKLDPVKDENGD T+ +TD STRSNGFRH G
Sbjct: 61  KGSDIVSKEMKNPPAAENGKRRRRNSQVKEKLDPVKDENGDGTRSSTDESTRSNGFRHNG 120

Query: 121 SRRKSKPHRAAEAGVNCK 139
           SRRKSKP RAAEAGV+CK
Sbjct: 121 SRRKSKPRRAAEAGVSCK 138

[Close]

BLAST of Sed0019726 vs. NCBI nr
Match: XP_022988232.1 (uncharacterized protein LOC111485534 [Cucurbita maxima])

HSP 1 Score: 226.5 bits (576), Expect = 1.4e-55
Identity = 116/138 (84.06%), Postives = 127/138 (92.03%), Query Frame = 0


Query: 1   MGRGRGKGRRLTVTSHDDAGSGEEEKIPAQKRRGRPQKPLKDGIDEEEAEMIEDNDIENL 60
           MGRGRGKGR+LT+T+HDDAGSGEEEKIPAQKRRGRPQKPLKD +DEEEAE IED+D EN+
Sbjct: 1   MGRGRGKGRKLTMTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEMDEEEAEKIEDDDSENV 60

Query: 61  KGSEIVIKEMTGPLAAENGKRRRRNSQVKEKLDPVKDENGDATQPNTDVSTRSNGFRHYG 120
           KG +IV KEM GP AAENGKRRRR+SQVKEKLDPVKDENGD T+ +TD STRSNGFRH G
Sbjct: 61  KGCDIVSKEMKGPPAAENGKRRRRSSQVKEKLDPVKDENGDGTRSSTDESTRSNGFRHNG 120

Query: 121 SRRKSKPHRAAEAGVNCK 139
           SRRKSKPHRAAEAGVNC+
Sbjct: 121 SRRKSKPHRAAEAGVNCR 138

[Close]

BLAST of Sed0019726 vs. NCBI nr
Match: XP_023516906.1 (uncharacterized protein LOC111780671 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 226.5 bits (576), Expect = 1.4e-55
Identity = 117/138 (84.78%), Postives = 126/138 (91.30%), Query Frame = 0


Query: 1   MGRGRGKGRRLTVTSHDDAGSGEEEKIPAQKRRGRPQKPLKDGIDEEEAEMIEDNDIENL 60
           MGRGRGKGR+LTVT+HDDAGSGEEEKIPAQKRRGRPQKPLKD IDEEEAE IED+D EN+
Sbjct: 1   MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDSENV 60

Query: 61  KGSEIVIKEMTGPLAAENGKRRRRNSQVKEKLDPVKDENGDATQPNTDVSTRSNGFRHYG 120
           KG +IV KEM  P AAENGKRRRR+SQVKEKLDPVKDENGD T+ +TD STRSNGFRH G
Sbjct: 61  KGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENGDGTRSSTDESTRSNGFRHNG 120

Query: 121 SRRKSKPHRAAEAGVNCK 139
           SRRKSKPHRAAEAGVNC+
Sbjct: 121 SRRKSKPHRAAEAGVNCR 138

[Close]

BLAST of Sed0019726 vs. NCBI nr
Match: KAG6590227.1 (hypothetical protein SDJN03_15650, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023867.1 hypothetical protein SDJN02_14894, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 224.9 bits (572), Expect = 4.1e-55
Identity = 116/138 (84.06%), Postives = 125/138 (90.58%), Query Frame = 0


Query: 1   MGRGRGKGRRLTVTSHDDAGSGEEEKIPAQKRRGRPQKPLKDGIDEEEAEMIEDNDIENL 60
           MGRGRGKGR+LTVT+HDDAGSGEEEKIPAQKRRGRPQKPLKD IDEEE E IED+D EN+
Sbjct: 1   MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENV 60

Query: 61  KGSEIVIKEMTGPLAAENGKRRRRNSQVKEKLDPVKDENGDATQPNTDVSTRSNGFRHYG 120
           KG +IV KEM  P AAENGKRRRR+SQVKEKLDPVKDENGD T+ +TD STRSNGFRH G
Sbjct: 61  KGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENGDGTRSSTDESTRSNGFRHNG 120

Query: 121 SRRKSKPHRAAEAGVNCK 139
           SRRKSKPHRAAEAGVNC+
Sbjct: 121 SRRKSKPHRAAEAGVNCR 138

[Close]

BLAST of Sed0019726 vs. ExPASy TrEMBL
Match: A0A1S3BRW6 (uncharacterized protein LOC103492511 OS=Cucumis melo OX=3656 GN=LOC103492511 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 4.0e-56
Identity = 119/138 (86.23%), Postives = 125/138 (90.58%), Query Frame = 0


Query: 1   MGRGRGKGRRLTVTSHDDAGSGEEEKIPAQKRRGRPQKPLKDGIDEEEAEMIEDNDIENL 60
           MGRGRGKGR+LTVT+HDDAGSGEEEKIPAQKRRGRPQKPLKD IDEEEAE IED D ENL
Sbjct: 1   MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENL 60

Query: 61  KGSEIVIKEMTGPLAAENGKRRRRNSQVKEKLDPVKDENGDATQPNTDVSTRSNGFRHYG 120
           KGS+IV KEM  P AAENGKRRRRNSQVKEKLDPVKDENGD T+ +TD STRSNGFRH G
Sbjct: 61  KGSDIVSKEMKNPPAAENGKRRRRNSQVKEKLDPVKDENGDGTRSSTDESTRSNGFRHNG 120

Query: 121 SRRKSKPHRAAEAGVNCK 139
           SRRKSKP RAAEAGV+CK
Sbjct: 121 SRRKSKPRRAAEAGVSCK 138

[Close]

BLAST of Sed0019726 vs. ExPASy TrEMBL
Match: A0A5A7TJZ9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold824G00790 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 4.0e-56
Identity = 119/138 (86.23%), Postives = 125/138 (90.58%), Query Frame = 0


Query: 1   MGRGRGKGRRLTVTSHDDAGSGEEEKIPAQKRRGRPQKPLKDGIDEEEAEMIEDNDIENL 60
           MGRGRGKGR+LTVT+HDDAGSGEEEKIPAQKRRGRPQKPLKD IDEEEAE IED D ENL
Sbjct: 1   MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENL 60

Query: 61  KGSEIVIKEMTGPLAAENGKRRRRNSQVKEKLDPVKDENGDATQPNTDVSTRSNGFRHYG 120
           KGS+IV KEM  P AAENGKRRRRNSQVKEKLDPVKDENGD T+ +TD STRSNGFRH G
Sbjct: 61  KGSDIVSKEMKNPPAAENGKRRRRNSQVKEKLDPVKDENGDGTRSSTDESTRSNGFRHNG 120

Query: 121 SRRKSKPHRAAEAGVNCK 139
           SRRKSKP RAAEAGV+CK
Sbjct: 121 SRRKSKPRRAAEAGVSCK 138

[Close]

BLAST of Sed0019726 vs. ExPASy TrEMBL
Match: A0A0A0LXE8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G605770 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 4.0e-56
Identity = 119/138 (86.23%), Postives = 125/138 (90.58%), Query Frame = 0


Query: 1   MGRGRGKGRRLTVTSHDDAGSGEEEKIPAQKRRGRPQKPLKDGIDEEEAEMIEDNDIENL 60
           MGRGRGKGR+LTVT+HDDAGSGEEEKIPAQKRRGRPQKPLKD IDEEEAE IED D ENL
Sbjct: 1   MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDEDSENL 60

Query: 61  KGSEIVIKEMTGPLAAENGKRRRRNSQVKEKLDPVKDENGDATQPNTDVSTRSNGFRHYG 120
           KGS+IV KEM  P AAENGKRRRRNSQVKEKLDPVKDENGD T+ +TD STRSNGFRH G
Sbjct: 61  KGSDIVSKEMKNPPAAENGKRRRRNSQVKEKLDPVKDENGDGTRSSTDESTRSNGFRHNG 120

Query: 121 SRRKSKPHRAAEAGVNCK 139
           SRRKSKP RAAEAGV+CK
Sbjct: 121 SRRKSKPRRAAEAGVSCK 138

[Close]

BLAST of Sed0019726 vs. ExPASy TrEMBL
Match: A0A6J1JCI2 (uncharacterized protein LOC111485534 OS=Cucurbita maxima OX=3661 GN=LOC111485534 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 6.9e-56
Identity = 116/138 (84.06%), Postives = 127/138 (92.03%), Query Frame = 0


Query: 1   MGRGRGKGRRLTVTSHDDAGSGEEEKIPAQKRRGRPQKPLKDGIDEEEAEMIEDNDIENL 60
           MGRGRGKGR+LT+T+HDDAGSGEEEKIPAQKRRGRPQKPLKD +DEEEAE IED+D EN+
Sbjct: 1   MGRGRGKGRKLTMTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEMDEEEAEKIEDDDSENV 60

Query: 61  KGSEIVIKEMTGPLAAENGKRRRRNSQVKEKLDPVKDENGDATQPNTDVSTRSNGFRHYG 120
           KG +IV KEM GP AAENGKRRRR+SQVKEKLDPVKDENGD T+ +TD STRSNGFRH G
Sbjct: 61  KGCDIVSKEMKGPPAAENGKRRRRSSQVKEKLDPVKDENGDGTRSSTDESTRSNGFRHNG 120

Query: 121 SRRKSKPHRAAEAGVNCK 139
           SRRKSKPHRAAEAGVNC+
Sbjct: 121 SRRKSKPHRAAEAGVNCR 138

[Close]

BLAST of Sed0019726 vs. ExPASy TrEMBL
Match: A0A6J1H9S1 (uncharacterized protein LOC111461426 OS=Cucurbita moschata OX=3662 GN=LOC111461426 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 5.8e-55
Identity = 115/138 (83.33%), Postives = 124/138 (89.86%), Query Frame = 0


Query: 1   MGRGRGKGRRLTVTSHDDAGSGEEEKIPAQKRRGRPQKPLKDGIDEEEAEMIEDNDIENL 60
           MGRGRGKGR+ TVT+HDDAGSGEEEKIPAQKRRGRPQKPLKD IDEEE E IED+D EN+
Sbjct: 1   MGRGRGKGRKFTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENV 60

Query: 61  KGSEIVIKEMTGPLAAENGKRRRRNSQVKEKLDPVKDENGDATQPNTDVSTRSNGFRHYG 120
           KG +IV KEM  P AAENGKRRRR+SQVKEKLDPVKDENGD T+ +TD STRSNGFRH G
Sbjct: 61  KGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENGDGTRSSTDESTRSNGFRHNG 120

Query: 121 SRRKSKPHRAAEAGVNCK 139
           SRRKSKPHRAAEAGVNC+
Sbjct: 121 SRRKSKPHRAAEAGVNCR 138

[Close]

BLAST of Sed0019726 vs. TAIR 10
Match: AT2G42190.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57930.2); Has 1381 Blast hits to 1230 proteins in 175 species: Archae - 3; Bacteria - 25; Metazoa - 672; Fungi - 135; Plants - 127; Viruses - 30; Other Eukaryotes - 389 (source: NCBI BLink). )

HSP 1 Score: 111.3 bits (277), Expect = 6.2e-25
Identity = 70/143 (48.95%), Postives = 93/143 (65.03%), Query Frame = 0


Query: 1   MGRGRGKGRRLTVTSHDDAGSGEEEKIPAQKRRGRPQKPLKDGIDEEE----AEMIEDND 60
           M RGRGKG++   ++ +D GSG+EEKIPA +RRGRPQKP+KD  +EEE     EM+E  +
Sbjct: 1   MRRGRGKGKKQNASAREDRGSGDEEKIPAYRRRGRPQKPMKDDFEEEEEEDDEEMVEKME 60

Query: 61  IENLKGSEIVIKEMTGPLAAENGKRRRRNSQVKEKLDPVKDENGDATQPNTDVSTRSN-- 120
           +E+ +  EI      G + +++ K R+R        D  ++ENG  ++PNTD STRS   
Sbjct: 61  VED-EDEEI----DDGSVTSKDLKERKRKMSNGSNTDLTEEENGLGSKPNTDDSTRSTSI 120

Query: 121 GFRHYGSRRKSKPHRAAEAGVNC 138
           GFR  GSRRKSKP RAAEA V C
Sbjct: 121 GFRQNGSRRKSKPRRAAEAVVEC 138

[Close]

BLAST of Sed0019726 vs. TAIR 10
Match: AT3G57930.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42190.1); Has 1519 Blast hits to 1241 proteins in 182 species: Archae - 0; Bacteria - 60; Metazoa - 576; Fungi - 133; Plants - 127; Viruses - 30; Other Eukaryotes - 593 (source: NCBI BLink). )

HSP 1 Score: 103.6 bits (257), Expect = 1.3e-22
Identity = 65/140 (46.43%), Postives = 92/140 (65.71%), Query Frame = 0


Query: 1   MGRGRGKGRRLTVTSHDDAGSGEEEKIPAQKRRGRPQKPLKDGIDEEEAEMIEDNDIENL 60
           M RGRGKG+R   T+ +D GSGEEEKIPA ++RGRPQKP+KD  +EEE E+++  D E  
Sbjct: 1   MRRGRGKGKRQNATAREDRGSGEEEKIPAFRKRGRPQKPVKDE-EEEEEELVKKTDEEED 60

Query: 61  KGSEIVIKEMTGPLAAENGKRRRRNSQVKEKLDPVKDENGDATQPNTDVSTRSN---GFR 120
           K  +      +     ENG++R++  + KE  +  ++ENG  ++ +T+ S +S+   GFR
Sbjct: 61  KDDDTNGSVTSKENVTENGRKRKKPVESKES-NITEEENGVGSKSSTEDSMKSSSSIGFR 120

Query: 121 HYGSRRKSKPHRAAEAGVNC 138
             GSRRK+KP RAAEA V C
Sbjct: 121 QNGSRRKNKPRRAAEAVVEC 138

[Close]

BLAST of Sed0019726 vs. TAIR 10
Match: AT3G57930.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42190.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 103.6 bits (257), Expect = 1.3e-22
Identity = 65/140 (46.43%), Postives = 92/140 (65.71%), Query Frame = 0


Query: 1   MGRGRGKGRRLTVTSHDDAGSGEEEKIPAQKRRGRPQKPLKDGIDEEEAEMIEDNDIENL 60
           M RGRGKG+R   T+ +D GSGEEEKIPA ++RGRPQKP+KD  +EEE E+++  D E  
Sbjct: 1   MRRGRGKGKRQNATAREDRGSGEEEKIPAFRKRGRPQKPVKDE-EEEEEELVKKTDEEED 60

Query: 61  KGSEIVIKEMTGPLAAENGKRRRRNSQVKEKLDPVKDENGDATQPNTDVSTRSN---GFR 120
           K  +      +     ENG++R++  + KE  +  ++ENG  ++ +T+ S +S+   GFR
Sbjct: 61  KDDDTNGSVTSKENVTENGRKRKKPVESKES-NITEEENGVGSKSSTEDSMKSSSSIGFR 120

Query: 121 HYGSRRKSKPHRAAEAGVNC 138
             GSRRK+KP RAAEA V C
Sbjct: 121 QNGSRRKNKPRRAAEAVVEC 138

The following BLAST results are available for this feature:

BLAST of Sed0019726 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879962.1	6.4e-56	86.23	uncharacterized protein LOC120071662 [Benincasa hispida]	[more]
XP_004149029.1	8.3e-56	86.23	uncharacterized protein LOC101218566 [Cucumis sativus] >XP_004149030.1 uncharact...	[more]
XP_022988232.1	1.4e-55	84.06	uncharacterized protein LOC111485534 [Cucurbita maxima]	[more]
XP_023516906.1	1.4e-55	84.78	uncharacterized protein LOC111780671 [Cucurbita pepo subsp. pepo]	[more]
KAG6590227.1	4.1e-55	84.06	hypothetical protein SDJN03_15650, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Sed0019726 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0019726 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BRW6	4.0e-56	86.23	uncharacterized protein LOC103492511 OS=Cucumis melo OX=3656 GN=LOC103492511 PE=...	[more]
A0A5A7TJZ9	4.0e-56	86.23	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0LXE8	4.0e-56	86.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G605770 PE=4 SV=1	[more]
A0A6J1JCI2	6.9e-56	84.06	uncharacterized protein LOC111485534 OS=Cucurbita maxima OX=3661 GN=LOC111485534...	[more]
A0A6J1H9S1	5.8e-55	83.33	uncharacterized protein LOC111461426 OS=Cucurbita moschata OX=3662 GN=LOC1114614...	[more]

BLAST of Sed0019726 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42190.1	6.2e-25	48.95	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G57930.1	1.3e-22	46.43	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G57930.2	1.3e-22	46.43	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..138
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..116
None	No IPR available	PANTHER	PTHR34055	OS09G0491596 PROTEIN	coord: 1..138
None	No IPR available	PANTHER	PTHR34055:SF1	OS09G0491596 PROTEIN	coord: 1..138

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0019726.1	Sed0019726.1	mRNA