Sed0019710 (gene) Chayote v1

Overview
NameSed0019710
Typegene
OrganismSechium edule (Chayote v1)
DescriptionSWIM-type domain-containing protein
LocationLG12: 9561779 .. 9564512 (+)
RNA-Seq ExpressionSed0019710
SyntenySed0019710
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAAGATTCTTATTGTTGTCTTCCATGGTGGGCAATGGAATGCTAATGGTTCTTATGAGAAGTATAAGATTAGTGGAGTTTTGGTGGATGAACTAATGAGTTTTGAAACTTTTAGTTTGCTGATATTAAGAGAATTAAAATTGGATGTACATCGATCTTCTTCAAAATTATATGTTTTATTGGGTTATGGCCAAAGTACCCCCCTTTTTGAAATTTTGGAAGATAAAGACGTAGACTGGTTCTTAACATTAGTTAAGAATAATGGTACAAGACATCCATTAGTGGTTGATGTTAAGGACTTTTATTTAGAGGGGACATCTAGTAGTGTTGTTAGCAATTCAACTTTGTTGGTGTCTTCCTCAACTGTAGATGATAACGATGGTGATGGTGTGCCTTTTCATGTCATTAAAGATATTCGGTTGGATTGTGTCTTTAATGTAAAAGATACATTTGCTAGCAAAGAAGTGTTGTGTAGTTGTTTTAAATACTTGGTTGTGAAAAATAATTTTGAGTTTAGGACTCCTAGATCCAGCAATCAAGCAGTTGAGTTTCAATGTTGCAAAGCTGATTGTTTATGGAATGTTAAGGCATCTAGTTTCAAGGATAGTGATTTATGGATCCTTAAGAAGTACGTTTCTATTCATAATTGTCCTTTGAATAGTATTCAAACATCGCATAGGCAAGCATCATCTATTTTAATCGGGGATTCTTTAAAAGAAGAATTTAGGTTTGGTTCCTTTAAAAGTCTGACACCGAAAGAAATTAAGGTTAAAGCGCGTTCAAAGCTTGGTGTTAGTGTTAGTTATGCAAAAGCATATAGGGCAAAAGAACACATCATGAAGGTGTTGAAGGGCGATGCAGCTGAATCTTATTCCTTGATTCCAAAGTTTTTCAAGAAGTTAGAAGAAATGAATCCAGGTTAGTTTAACTTATTGGTTTCTATCACTCGCTTCTATCTCTTTGAATTCTTTTTAGGTTGATGTTTTGTATGCAGAGACCTTCTATCACCTATGCAAAAACCTTCTATCACTTATGCATAAACCTTCTATCACCTATGCATAAACCTTCTATCACTTATGCAGAAACTTCTATCACTTATGAAAAAATCTTCTATCATTTATGCAGAAACCTATCACTCACTTCTGAATGAGCACTATTAATCAAACATTGAAGTCTATCACTCATTCACTCTTAAAATTTATTTTTGCAGGAACATACACAACATTTGAAACCAATGATGATGGACATTTCAAATATTGTTTTATGGCCATGGGTGCTTCTATTGAAGGTTGGTTGTTTTGTAGGCCTAATATATCTGTGGATGAGACTTTCTTGAAGGGAAAATTTGGAGGTATTTTGCTAACAGCCTCAACTATGGATGGTAATAATCAAATATTTCCACTTGCTTTTAGTATTGTTGATTCAGAAATGATGCTTCCTGGGCTTTGGTTTTTGAGAATATGAAGAAATGTTTTGGACATCCGAGAAAATTTGGTTTTCATGTCGATCGGCATTTGAGCATTCCTAAAGGTTTTCTCGATCGCTTATCCAAATGTTGAATATCAGATTTGTATGCAACATTTGTTGATGAACATTAAGTTACACTTTAAAGGATCTGTGATAGATAAGATTTTTAAAACATGCGCAAAGGCTTATACAGTTGAAGATTTCGAATATAATATGAGTTTGTTGGAGTCCATACACCCCACAATTCGTCAGTATTTGTTTAATATTGGTTATGCAAAGTGGGCGTGCATATTCTAGGAAAAGAAGATACGAGAATGATGACGCTAAATAGTGCTTTGAAAGCATAAATTCACTTCTCAAAGAGCCTAGAAATTATCCCGTGGCAATGCTTCTCGATTCTACTAGAGACACATTGCAATCATGGTTTTTTGACCGAAGAAAGTCTGCAACTTCTATGACTTCAGTTTTGTCTTCTTGGGCGGAAAAGGTTTTACGAAAAAATCATGACGCATCTAGAACTTTCAAAGTAAGGTTTCAATTTACATAACTATTGCATTTCTTTCAATTAGGCAGAAATATTCTATCAGCTATGCAGAAGCTTTCTATCACCTATGCAAAAAGCTTCTATCACCTCTGCAGAAACCTTCTATCACTTAGGCAGAAATATTCTATACGTCTTCTATCACTTAGGCAGAAACCTTCTATTGTATATACATTGTCTATACATAAATATTTTATCAGCAATGCATACACCTTCTATCACCTATGCATAAACTTATTCAAATCTATTTGTACTGTGTTTTGTCTTAAATCGTGATTAGTTTAACTTTTTGTAGGTTGATTCTATCAAAGAATGCAGAGCATAAAGTAATTGATGAGACTAATCATTTTTTGGTTAATTTGGATACTCGGTCATGTACATGCCGTGTTTGGGATCTTGATGAAATTCCATGCTCTCATGCGCTTGCTGCTATACGTGCACTAGATTTGAATCCTTATACTTTTGTGTCTAATTTTTATTATTCAAATGTTTTGACATCATCTTATAGAGGTTTAGTTCGCCCAGTTGGAAATCATACTAGTTGGAGCTCTATTGATGTTGATGTTAGTGCATTACCTCCAATTATGAAACGACAAGCTGGAAGGCCTCGCAAAGAAAGAATACCATCTATCGGTGAAGCAAGGAGTTATATAAGATGTAGTCGTTGTCATCGAAGTGGTCATAATTGTAGAACTTGTAAATTTGCTTCTACTTTAAAATGA

mRNA sequence

ATGGATAAGATTCTTATTGTTGTCTTCCATGGTGGGCAATGGAATGCTAATGGTTCTTATGAGAAGTATAAGATTAGTGGAGTTTTGGTGGATGAACTAATGAGTTTTGAAACTTTTAGTTTGCTGATATTAAGAGAATTAAAATTGGATGTACATCGATCTTCTTCAAAATTATATGTTTTATTGGGTTATGGCCAAAGTACCCCCCTTTTTGAAATTTTGGAAGATAAAGACGTAGACTGGTTCTTAACATTAGTTAAGAATAATGGTACAAGACATCCATTAGTGGTTGATGTTAAGGACTTTTATTTAGAGGGGACATCTAGTAGTGTTGTTAGCAATTCAACTTTGTTGGTGTCTTCCTCAACTGTAGATGATAACGATGGTGATGGTGTGCCTTTTCATGTCATTAAAGATATTCGGTTGGATTGTGTCTTTAATGTAAAAGATACATTTGCTAGCAAAGAAGTGTTGTGTAGTTGTTTTAAATACTTGGTTGTGAAAAATAATTTTGAGTTTAGGACTCCTAGATCCAGCAATCAAGCAGTTGAGTTTCAATGTTGCAAAGCTGATTGTTTATGGAATGTTAAGGCATCTAGTTTCAAGGATAGTGATTTATGGATCCTTAAGAAGCAAGCATCATCTATTTTAATCGGGGATTCTTTAAAAGAAGAATTTAGGTTTGGTTCCTTTAAAAGTCTGACACCGAAAGAAATTAAGGTTAAAGCGCGTTCAAAGCTTGGTGTTAGTGTTAGTTATGCAAAAGCATATAGGGCAAAAGAACACATCATGAAGGTGTTGAAGGGCGATGCAGCTGAATCTTATTCCTTGATTCCAAAGTTTTTCAAGAAGTTAGAAGAAATGAATCCAGGTTATTTAACTTTTTGTAGGTTGATTCTATCAAAGAATGCAGAGCATAAAGTAATTGATGAGACTAATCATTTTTTGGTTAATTTGGATACTCGGTCATGTACATGCCGTGTTTGGGATCTTGATGAAATTCCATGCTCTCATGCGCTTGCTGCTATACGTGCACTAGATTTGAATCCTTATACTTTTGTGTCTAATTTTTATTATTCAAATGTTTTGACATCATCTTATAGAGGTTTAGTTCGCCCAGTTGGAAATCATACTAGTTGGAGCTCTATTGATGTTGATGTTAGTGCATTACCTCCAATTATGAAACGACAAGCTGGAAGGCCTCGCAAAGAAAGAATACCATCTATCGGTGAAGCAAGGAGTTATATAAGATGTAGTCGTTGTCATCGAAGTGGTCATAATTGTAGAACTTGTAAATTTGCTTCTACTTTAAAATGA

Coding sequence (CDS)

ATGGATAAGATTCTTATTGTTGTCTTCCATGGTGGGCAATGGAATGCTAATGGTTCTTATGAGAAGTATAAGATTAGTGGAGTTTTGGTGGATGAACTAATGAGTTTTGAAACTTTTAGTTTGCTGATATTAAGAGAATTAAAATTGGATGTACATCGATCTTCTTCAAAATTATATGTTTTATTGGGTTATGGCCAAAGTACCCCCCTTTTTGAAATTTTGGAAGATAAAGACGTAGACTGGTTCTTAACATTAGTTAAGAATAATGGTACAAGACATCCATTAGTGGTTGATGTTAAGGACTTTTATTTAGAGGGGACATCTAGTAGTGTTGTTAGCAATTCAACTTTGTTGGTGTCTTCCTCAACTGTAGATGATAACGATGGTGATGGTGTGCCTTTTCATGTCATTAAAGATATTCGGTTGGATTGTGTCTTTAATGTAAAAGATACATTTGCTAGCAAAGAAGTGTTGTGTAGTTGTTTTAAATACTTGGTTGTGAAAAATAATTTTGAGTTTAGGACTCCTAGATCCAGCAATCAAGCAGTTGAGTTTCAATGTTGCAAAGCTGATTGTTTATGGAATGTTAAGGCATCTAGTTTCAAGGATAGTGATTTATGGATCCTTAAGAAGCAAGCATCATCTATTTTAATCGGGGATTCTTTAAAAGAAGAATTTAGGTTTGGTTCCTTTAAAAGTCTGACACCGAAAGAAATTAAGGTTAAAGCGCGTTCAAAGCTTGGTGTTAGTGTTAGTTATGCAAAAGCATATAGGGCAAAAGAACACATCATGAAGGTGTTGAAGGGCGATGCAGCTGAATCTTATTCCTTGATTCCAAAGTTTTTCAAGAAGTTAGAAGAAATGAATCCAGGTTATTTAACTTTTTGTAGGTTGATTCTATCAAAGAATGCAGAGCATAAAGTAATTGATGAGACTAATCATTTTTTGGTTAATTTGGATACTCGGTCATGTACATGCCGTGTTTGGGATCTTGATGAAATTCCATGCTCTCATGCGCTTGCTGCTATACGTGCACTAGATTTGAATCCTTATACTTTTGTGTCTAATTTTTATTATTCAAATGTTTTGACATCATCTTATAGAGGTTTAGTTCGCCCAGTTGGAAATCATACTAGTTGGAGCTCTATTGATGTTGATGTTAGTGCATTACCTCCAATTATGAAACGACAAGCTGGAAGGCCTCGCAAAGAAAGAATACCATCTATCGGTGAAGCAAGGAGTTATATAAGATGTAGTCGTTGTCATCGAAGTGGTCATAATTGTAGAACTTGTAAATTTGCTTCTACTTTAAAATGA

Protein sequence

MDKILIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFSLLILRELKLDVHRSSSKLYVLLGYGQSTPLFEILEDKDVDWFLTLVKNNGTRHPLVVDVKDFYLEGTSSSVVSNSTLLVSSSTVDDNDGDGVPFHVIKDIRLDCVFNVKDTFASKEVLCSCFKYLVVKNNFEFRTPRSSNQAVEFQCCKADCLWNVKASSFKDSDLWILKKQASSILIGDSLKEEFRFGSFKSLTPKEIKVKARSKLGVSVSYAKAYRAKEHIMKVLKGDAAESYSLIPKFFKKLEEMNPGYLTFCRLILSKNAEHKVIDETNHFLVNLDTRSCTCRVWDLDEIPCSHALAAIRALDLNPYTFVSNFYYSNVLTSSYRGLVRPVGNHTSWSSIDVDVSALPPIMKRQAGRPRKERIPSIGEARSYIRCSRCHRSGHNCRTCKFASTLK
Homology
BLAST of Sed0019710 vs. NCBI nr
Match: TYK00436.1 (uncharacterized protein E5676_scaffold169G00400 [Cucumis melo var. makuwa] >TYK00466.1 uncharacterized protein E5676_scaffold169G00710 [Cucumis melo var. makuwa] >TYK03113.1 uncharacterized protein E5676_scaffold374G00480 [Cucumis melo var. makuwa] >TYK06769.1 uncharacterized protein E5676_scaffold13G00700 [Cucumis melo var. makuwa] >TYK09113.1 uncharacterized protein E5676_scaffold475G001040 [Cucumis melo var. makuwa])

HSP 1 Score: 367.5 bits (942), Expect = 1.6e-97
Identity = 222/523 (42.45%), Postives = 291/523 (55.64%), Query Frame = 0

Query: 1   MDKILIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFSLLILRELKLDVHRSSSKLYV 60
           M K+ IVVFH GQW+   SY  YK +GVLVDE+MSFE F  LILRE+  D   SS +L +
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTTGVLVDEMMSFENFVSLILREVLFDASPSSIQLSI 60

Query: 61  LLGYGQST--PLFEILEDKDVDWFLTLVKNNGTRHPLV----VDVKDFYLEGTS--SSVV 120
           LL YG +    + +I EDKDV WFL+LVK   TRHPLV      V D  LE +S   S +
Sbjct: 61  LLDYGITNIQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIAHVPDMDLEWSSVVDSGM 120

Query: 121 SNSTLLVSSSTVDDNDGDGVPFHVIKDIR---LDCVFNV--KDTFASKEVLCSCFKYLVV 180
            N   L+ SS++DD+      F ++ DI    L   F++  KD FASKE+L   F Y+ +
Sbjct: 121 DNLCSLLPSSSIDDD------FQILTDIHVSSLSSTFDLKEKDMFASKELLSKSFYYIAI 180

Query: 181 KNNFEFRTPRSSNQAVEFQCCKADCLWNVKASSFKDSDLWILK----------------- 240
           KNNFEF+T RS+++++EF+C + +C W V+AS +K  +LW L+                 
Sbjct: 181 KNNFEFKTVRSNSKSIEFKCSQDNCPWYVRASRYKGGELWRLRKYIANHNCSINVIQTTH 240

Query: 241 KQASSILIGDSLKEEFRFGSFKSLTPKEIKVKARSKLGVSVSYAKAYRAKEHIMKVLKGD 300
           KQAS+ LI D + ++  F SF   TP +I +  R+KLGV+VSY KA+RAKE +M  L G+
Sbjct: 241 KQASASLISDCIGKD--FSSFDRSTPNDIMIHMRTKLGVNVSYYKAWRAKELVMNSLNGE 300

Query: 301 AAESYSLIPKFFKKLEEMNPGYLT-------------------------FCRLILS---- 360
           A ESY+LIP FF KL+E+NPG  T                         +CR  +S    
Sbjct: 301 AKESYALIPNFFMKLKEINPGSFTAYETDTEGHFKYCFMAIGACIEGWKYCRPNISVDVV 360

Query: 361 --------------------------KNAEHKVIDETNHFLVNLDTRSCTCRVWDLDEIP 420
                                      + E +VID    F+V LD +SCTCRVWDLDEIP
Sbjct: 361 DFETNMRWMESMYPSIRDYLSKVNAINDVEFQVIDGRKQFIVRLDCKSCTCRVWDLDEIP 420

Query: 421 CSHALAAIRALDLNPYTFVSNFYYSNVLTSSYRGLVRPVGNHTSWSSIDVDVSALPPIMK 439
           C+HALA +R L                         RPVGNH +W SI ++ + LPP  K
Sbjct: 421 CAHALAVLRGL-------------------------RPVGNHANWKSIGIENNILPPTFK 480

BLAST of Sed0019710 vs. NCBI nr
Match: TYK22454.1 (uncharacterized protein E5676_scaffold3009G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 359.4 bits (921), Expect = 4.5e-95
Identity = 215/523 (41.11%), Postives = 287/523 (54.88%), Query Frame = 0

Query: 1   MDKILIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFSLLILRELKLDVHRSSSKLYV 60
           M K+ IVVFH GQW+   SY  YK +GVLVDE+M FE F  LILR ++ D   SS +L +
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTTGVLVDEIMCFENFVSLILRGVRFDASPSSIQLSI 60

Query: 61  LLGYG--QSTPLFEILEDKDVDWFLTLVKNNGTRHPLV----VDVKDFYLEGTS--SSVV 120
           LL YG      + +I EDKDV WFL+LVK   TRHPLV      V D  LE +S   S +
Sbjct: 61  LLDYGITDIQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIAHVPDMDLEWSSVVDSGM 120

Query: 121 SNSTLLVSSSTVDDNDGDGVPFHVIKDIRLDCV-----FNVKDTFASKEVLCSCFKYLVV 180
            N   L+ SS+++D+      F ++ DI +  +        KD FASK++L   F Y+ +
Sbjct: 121 DNLCSLLPSSSINDD------FQILTDIHVSSLSFTFDLKEKDMFASKKLLSKSFYYIAI 180

Query: 181 KNNFEFRTPRSSNQAVEFQCCKADCLWNVKASSFKDSDLWILK----------------- 240
           KNNFEF+T +S+++++EF+C + +C W V+AS +K  +LW L+                 
Sbjct: 181 KNNFEFKTVKSNSKSIEFKCSQDNCSWYVRASRYKGGELWRLRKYIANHNCSINVIQTTH 240

Query: 241 KQASSILIGDSLKEEFRFGSFKSLTPKEIKVKARSKLGVSVSYAKAYRAKEHIMKVLKGD 300
           KQAS+ LI D + ++  F SF   TP +I +  R+KLGV+VSY KA+RAKE +M  L G+
Sbjct: 241 KQASASLISDCIGKD--FSSFDRSTPNDIMIHMRTKLGVNVSYYKAWRAKELVMNSLNGE 300

Query: 301 AAESYSLIPKFFKKLEEMNPGYLT-------------------------FCRLILS---- 360
           A ESY+LIP FF KL+E+NPG  T                         +CR  +S    
Sbjct: 301 AKESYALIPNFFMKLKEINPGSFTAYETDTEGHFKYCFMAIGACIEGWKYCRPNISVDVV 360

Query: 361 --------------------------KNAEHKVIDETNHFLVNLDTRSCTCRVWDLDEIP 420
                                      + E +VID    F+V LD +SCTCRVWDLDEIP
Sbjct: 361 DFETNMRWMESMYPSIRDYLSKVNAINDVEFQVIDGRKQFIVRLDCKSCTCRVWDLDEIP 420

Query: 421 CSHALAAIRALDLNPYTFVSNFYYSNVLTSSYRGLVRPVGNHTSWSSIDVDVSALPPIMK 439
           C+HALA +R L                         RPVGNH +W SI ++ + LPP  K
Sbjct: 421 CAHALAVLRGL-------------------------RPVGNHANWKSIGIENNILPPTFK 480

BLAST of Sed0019710 vs. NCBI nr
Match: KAA0054854.1 (uncharacterized protein E6C27_scaffold406G00610 [Cucumis melo var. makuwa])

HSP 1 Score: 349.7 bits (896), Expect = 3.5e-92
Identity = 211/523 (40.34%), Postives = 284/523 (54.30%), Query Frame = 0

Query: 1   MDKILIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFSLLILRELKLDVHRSSSKLYV 60
           M K+ IVVFH GQW+   SY  YK +GVLVDE+M FE F  LILR ++ D   SS +L +
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTTGVLVDEIMCFENFVSLILRGVRFDASPSSIQLSI 60

Query: 61  LLGYG--QSTPLFEILEDKDVDWFLTLVKNNGTRHPLV----VDVKDFYLEGTS--SSVV 120
           LL YG      + +I EDK+V WFL+LVK   TRHPLV      V +  LE +S   S +
Sbjct: 61  LLDYGITDIQTVVQIQEDKNVTWFLSLVKGQITRHPLVAHAIAHVSNMDLEWSSVVDSGM 120

Query: 121 SNSTLLVSSSTVDDNDGDGVPFHVIKDIRLDCV-----FNVKDTFASKEVLCSCFKYLVV 180
            N   L+ SS+++D+      F ++ DI +  +        KD FASK++L   F Y+ +
Sbjct: 121 DNLCSLLPSSSINDD------FQILTDIHVSSLSFTFDLKEKDMFASKKLLSKSFYYIAI 180

Query: 181 KNNFEFRTPRSSNQAVEFQCCKADCLWNVKASSFKDSDLWILK----------------- 240
           KNNFEF+T +S+++++EF+C + +C W V+AS +K  +LW L+                 
Sbjct: 181 KNNFEFKTVKSNSKSIEFKCSQDNCSWYVRASRYKGGELWRLRKYIANHNCSINVIQTTH 240

Query: 241 KQASSILIGDSLKEEFRFGSFKSLTPKEIKVKARSKLGVSVSYAKAYRAKEHIMKVLKGD 300
           KQA S LI D + ++  F SF   TP +I +  R+KLGV+VSY KA RAKE +M  L G+
Sbjct: 241 KQAFSSLISDCIVKD--FSSFDRSTPNDIMIHMRTKLGVNVSYYKALRAKELVMNSLNGE 300

Query: 301 AAESYSLIPKFFKKLEEMNPGYLT-------------------------FCRLILS---- 360
           A ESY+LIP FF KL+E+NPG  T                         +CR  +S    
Sbjct: 301 AKESYALIPNFFMKLKEINPGSFTAYETDIEGHFKYCFMAIGACIEGWKYCRPNISVDVV 360

Query: 361 --------------------------KNAEHKVIDETNHFLVNLDTRSCTCRVWDLDEIP 420
                                      + E +VID    F+V LD +SCTCRVWDLDEIP
Sbjct: 361 DFETNMRWMESMYPSTRDYLSKVNAINDVEFQVIDGRKQFIVRLDCKSCTCRVWDLDEIP 420

Query: 421 CSHALAAIRALDLNPYTFVSNFYYSNVLTSSYRGLVRPVGNHTSWSSIDVDVSALPPIMK 439
           C+HAL  +R L                         RPVGNH +W SI ++ + LPP  K
Sbjct: 421 CAHALDVLRGL-------------------------RPVGNHANWKSIGIENNILPPTFK 480

BLAST of Sed0019710 vs. NCBI nr
Match: XP_038907134.1 (uncharacterized protein LOC120092945 [Benincasa hispida])

HSP 1 Score: 333.2 bits (853), Expect = 3.4e-87
Identity = 230/694 (33.14%), Postives = 300/694 (43.23%), Query Frame = 0

Query: 4   ILIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFSLLILRELKLDVHRSSSKLYVLLG 63
           I IVVFHGG WN    Y  YK +GVLVD++M FE F  LI++E++LD   SS +L  LL 
Sbjct: 3   IPIVVFHGGIWNEK-RYVNYKTAGVLVDDIMGFEDFVGLIVKEIRLDASISSIELSTLLD 62

Query: 64  YGQS--TPLFEILEDKDVDWFLTLVKNNGTRHPLVVDVKDFYLEGTSSSVVSN-----ST 123
           +G +    + EI EDKDV WFLTLVK   TRHPLV  V    LEG+SS V S      S 
Sbjct: 63  FGMNKVQNIVEIHEDKDVAWFLTLVKEQSTRHPLVAHVTSMCLEGSSSVVSSEAENYLSI 122

Query: 124 LLVSSSTVDDNDGDGVPFHVIKDIRLDCVFNVKDTFASKEVLCSCFKYLVVKNNFEFRTP 183
           +  S   +DD+      F VI DI +      KD FASKE+L  CF Y+ VK NFEF+T 
Sbjct: 123 VPYSMPMIDDD------FQVIMDIHIARDLKEKDVFASKEILSKCFYYIAVKKNFEFKTL 182

Query: 184 RSSNQAVEFQCCKADCLWNVKASSFKDSDLWILKK-----------------QASSILIG 243
           RS+++++EF+C +  C W V+AS +K SDLW+L+K                 QAS+ LIG
Sbjct: 183 RSNSRSIEFRCVQDGCQWYVRASRYKASDLWMLRKFIDIHDCSMNNVQTSHRQASASLIG 242

Query: 244 DSLKEEFRFGSFKSLTPKEIKVKARSKLGVSVSYAKAYRAKEHIMKVLKGDAAESYSLIP 303
           D LK EFR  S  SLTPK+I  K R +LGV++SY KA+RAKEHIMK LKGDA ESY+LIP
Sbjct: 243 DCLKNEFRSSSSDSLTPKDIVNKVRKELGVNISYYKAWRAKEHIMKSLKGDACESYALIP 302

Query: 304 KFFKKLEEMNPGYLT-------------------------FCR----------------- 363
           KF  KLEE+NPG  T                          CR                 
Sbjct: 303 KFLMKLEELNPGTFTAYETDIDGHFKYCYMAIGSSIEGWKHCRPNIFVDGTFLKCKYAGT 362

Query: 364 ----------------------------------------------LILS---------- 420
                                                         +I+S          
Sbjct: 363 LLTASTVDGNNENFPLAFSIVDSENDASWKWFFENIKNSFGEREGLVIISNRHLSIPQGI 422

BLAST of Sed0019710 vs. NCBI nr
Match: TYK28211.1 (MuDR family transposase [Cucumis melo var. makuwa])

HSP 1 Score: 329.7 bits (844), Expect = 3.8e-86
Identity = 203/491 (41.34%), Postives = 268/491 (54.58%), Query Frame = 0

Query: 33  LMSFETFSLLILRELKLDVHRSSSKLYVLLGYG--QSTPLFEILEDKDVDWFLTLVKNNG 92
           +MSFE F  LILRE++ D   SS +L +LL YG        +I EDKDV WFL+LVK   
Sbjct: 1   MMSFENFVSLILREVRFDASPSSIQLSILLDYGITDIQTAVQIQEDKDVTWFLSLVKGQI 60

Query: 93  TRHPL----VVDVKDFYLEGTS--SSVVSNSTLLVSSSTVDDNDGDGVPFHVIKDIR--- 152
           TRHPL    +  V +  LE +S   S + N   L+SSS++DD+      F ++ DI    
Sbjct: 61  TRHPLAAHAIAHVSNMDLEWSSVVDSGMDNLCSLLSSSSIDDD------FQILTDIHVSS 120

Query: 153 LDCVFNV--KDTFASKEVLCSCFKYLVVKNNFEFRTPRSSNQAVEFQCCKADCLWNVKAS 212
           L   FN+  KD FASKE+L   F Y+ +KNNFEF+T RS+++++EF+C + +C W V+AS
Sbjct: 121 LSSTFNLKEKDMFASKELLSKSFYYIAIKNNFEFKTVRSNSKSIEFKCSQDNCPWYVRAS 180

Query: 213 SFKDSDLWILK-----------------KQASSILIGDSLKEEFRFGSFKSLTPKEIKVK 272
            +K  +LW L+                 KQASS LI D + ++  F SF   TP +I + 
Sbjct: 181 RYKGGELWQLRKYIANHNCSINVIQTTHKQASSSLISDCIVKD--FSSFDRSTPNDIMIH 240

Query: 273 ARSKLGVSVSYAKAYRAKEHIMKVLKGDAAESYSLIPKFFKKLEEMNPGYLT-------- 332
            R+KLGV+VSY KA+RAKE +M  L G+A ESY+LIP FF KL+E+NPG  T        
Sbjct: 241 MRTKLGVNVSYYKAWRAKELVMNSLNGEAKESYALIPNFFMKLKEINPGSFTAYETDTEG 300

Query: 333 -----------------FCRLILS------------------------------KNAEHK 392
                            +CR  +S                               + E +
Sbjct: 301 HFKYCFMAIGACIEGWKYCRPNISVDVVDFETNMRWMESMYPSIRDYLSKVNAINDVEFQ 360

Query: 393 VIDETNHFLVNLDTRSCTCRVWDLDEIPCSHALAAIRALDLNPYTFVSNFYYSNVLTSSY 439
           VID    F+V LD +SCTCRVWDLDEIPC+HALA +R L                     
Sbjct: 361 VIDGRKQFIVRLDCKSCTCRVWDLDEIPCAHALAVLRGL--------------------- 420

BLAST of Sed0019710 vs. ExPASy TrEMBL
Match: A0A5D3C8T8 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1081G00080 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 7.9e-98
Identity = 222/523 (42.45%), Postives = 291/523 (55.64%), Query Frame = 0

Query: 1   MDKILIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFSLLILRELKLDVHRSSSKLYV 60
           M K+ IVVFH GQW+   SY  YK +GVLVDE+MSFE F  LILRE+  D   SS +L +
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTTGVLVDEMMSFENFVSLILREVLFDASPSSIQLSI 60

Query: 61  LLGYGQST--PLFEILEDKDVDWFLTLVKNNGTRHPLV----VDVKDFYLEGTS--SSVV 120
           LL YG +    + +I EDKDV WFL+LVK   TRHPLV      V D  LE +S   S +
Sbjct: 61  LLDYGITNIQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIAHVPDMDLEWSSVVDSGM 120

Query: 121 SNSTLLVSSSTVDDNDGDGVPFHVIKDIR---LDCVFNV--KDTFASKEVLCSCFKYLVV 180
            N   L+ SS++DD+      F ++ DI    L   F++  KD FASKE+L   F Y+ +
Sbjct: 121 DNLCSLLPSSSIDDD------FQILTDIHVSSLSSTFDLKEKDMFASKELLSKSFYYIAI 180

Query: 181 KNNFEFRTPRSSNQAVEFQCCKADCLWNVKASSFKDSDLWILK----------------- 240
           KNNFEF+T RS+++++EF+C + +C W V+AS +K  +LW L+                 
Sbjct: 181 KNNFEFKTVRSNSKSIEFKCSQDNCPWYVRASRYKGGELWRLRKYIANHNCSINVIQTTH 240

Query: 241 KQASSILIGDSLKEEFRFGSFKSLTPKEIKVKARSKLGVSVSYAKAYRAKEHIMKVLKGD 300
           KQAS+ LI D + ++  F SF   TP +I +  R+KLGV+VSY KA+RAKE +M  L G+
Sbjct: 241 KQASASLISDCIGKD--FSSFDRSTPNDIMIHMRTKLGVNVSYYKAWRAKELVMNSLNGE 300

Query: 301 AAESYSLIPKFFKKLEEMNPGYLT-------------------------FCRLILS---- 360
           A ESY+LIP FF KL+E+NPG  T                         +CR  +S    
Sbjct: 301 AKESYALIPNFFMKLKEINPGSFTAYETDTEGHFKYCFMAIGACIEGWKYCRPNISVDVV 360

Query: 361 --------------------------KNAEHKVIDETNHFLVNLDTRSCTCRVWDLDEIP 420
                                      + E +VID    F+V LD +SCTCRVWDLDEIP
Sbjct: 361 DFETNMRWMESMYPSIRDYLSKVNAINDVEFQVIDGRKQFIVRLDCKSCTCRVWDLDEIP 420

Query: 421 CSHALAAIRALDLNPYTFVSNFYYSNVLTSSYRGLVRPVGNHTSWSSIDVDVSALPPIMK 439
           C+HALA +R L                         RPVGNH +W SI ++ + LPP  K
Sbjct: 421 CAHALAVLRGL-------------------------RPVGNHANWKSIGIENNILPPTFK 480

BLAST of Sed0019710 vs. ExPASy TrEMBL
Match: A0A5D3DFS5 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3009G00020 PE=4 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 2.2e-95
Identity = 215/523 (41.11%), Postives = 287/523 (54.88%), Query Frame = 0

Query: 1   MDKILIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFSLLILRELKLDVHRSSSKLYV 60
           M K+ IVVFH GQW+   SY  YK +GVLVDE+M FE F  LILR ++ D   SS +L +
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTTGVLVDEIMCFENFVSLILRGVRFDASPSSIQLSI 60

Query: 61  LLGYG--QSTPLFEILEDKDVDWFLTLVKNNGTRHPLV----VDVKDFYLEGTS--SSVV 120
           LL YG      + +I EDKDV WFL+LVK   TRHPLV      V D  LE +S   S +
Sbjct: 61  LLDYGITDIQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIAHVPDMDLEWSSVVDSGM 120

Query: 121 SNSTLLVSSSTVDDNDGDGVPFHVIKDIRLDCV-----FNVKDTFASKEVLCSCFKYLVV 180
            N   L+ SS+++D+      F ++ DI +  +        KD FASK++L   F Y+ +
Sbjct: 121 DNLCSLLPSSSINDD------FQILTDIHVSSLSFTFDLKEKDMFASKKLLSKSFYYIAI 180

Query: 181 KNNFEFRTPRSSNQAVEFQCCKADCLWNVKASSFKDSDLWILK----------------- 240
           KNNFEF+T +S+++++EF+C + +C W V+AS +K  +LW L+                 
Sbjct: 181 KNNFEFKTVKSNSKSIEFKCSQDNCSWYVRASRYKGGELWRLRKYIANHNCSINVIQTTH 240

Query: 241 KQASSILIGDSLKEEFRFGSFKSLTPKEIKVKARSKLGVSVSYAKAYRAKEHIMKVLKGD 300
           KQAS+ LI D + ++  F SF   TP +I +  R+KLGV+VSY KA+RAKE +M  L G+
Sbjct: 241 KQASASLISDCIGKD--FSSFDRSTPNDIMIHMRTKLGVNVSYYKAWRAKELVMNSLNGE 300

Query: 301 AAESYSLIPKFFKKLEEMNPGYLT-------------------------FCRLILS---- 360
           A ESY+LIP FF KL+E+NPG  T                         +CR  +S    
Sbjct: 301 AKESYALIPNFFMKLKEINPGSFTAYETDTEGHFKYCFMAIGACIEGWKYCRPNISVDVV 360

Query: 361 --------------------------KNAEHKVIDETNHFLVNLDTRSCTCRVWDLDEIP 420
                                      + E +VID    F+V LD +SCTCRVWDLDEIP
Sbjct: 361 DFETNMRWMESMYPSIRDYLSKVNAINDVEFQVIDGRKQFIVRLDCKSCTCRVWDLDEIP 420

Query: 421 CSHALAAIRALDLNPYTFVSNFYYSNVLTSSYRGLVRPVGNHTSWSSIDVDVSALPPIMK 439
           C+HALA +R L                         RPVGNH +W SI ++ + LPP  K
Sbjct: 421 CAHALAVLRGL-------------------------RPVGNHANWKSIGIENNILPPTFK 480

BLAST of Sed0019710 vs. ExPASy TrEMBL
Match: A0A5A7UI69 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold406G00610 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 1.7e-92
Identity = 211/523 (40.34%), Postives = 284/523 (54.30%), Query Frame = 0

Query: 1   MDKILIVVFHGGQWNANGSYEKYKISGVLVDELMSFETFSLLILRELKLDVHRSSSKLYV 60
           M K+ IVVFH GQW+   SY  YK +GVLVDE+M FE F  LILR ++ D   SS +L +
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTTGVLVDEIMCFENFVSLILRGVRFDASPSSIQLSI 60

Query: 61  LLGYG--QSTPLFEILEDKDVDWFLTLVKNNGTRHPLV----VDVKDFYLEGTS--SSVV 120
           LL YG      + +I EDK+V WFL+LVK   TRHPLV      V +  LE +S   S +
Sbjct: 61  LLDYGITDIQTVVQIQEDKNVTWFLSLVKGQITRHPLVAHAIAHVSNMDLEWSSVVDSGM 120

Query: 121 SNSTLLVSSSTVDDNDGDGVPFHVIKDIRLDCV-----FNVKDTFASKEVLCSCFKYLVV 180
            N   L+ SS+++D+      F ++ DI +  +        KD FASK++L   F Y+ +
Sbjct: 121 DNLCSLLPSSSINDD------FQILTDIHVSSLSFTFDLKEKDMFASKKLLSKSFYYIAI 180

Query: 181 KNNFEFRTPRSSNQAVEFQCCKADCLWNVKASSFKDSDLWILK----------------- 240
           KNNFEF+T +S+++++EF+C + +C W V+AS +K  +LW L+                 
Sbjct: 181 KNNFEFKTVKSNSKSIEFKCSQDNCSWYVRASRYKGGELWRLRKYIANHNCSINVIQTTH 240

Query: 241 KQASSILIGDSLKEEFRFGSFKSLTPKEIKVKARSKLGVSVSYAKAYRAKEHIMKVLKGD 300
           KQA S LI D + ++  F SF   TP +I +  R+KLGV+VSY KA RAKE +M  L G+
Sbjct: 241 KQAFSSLISDCIVKD--FSSFDRSTPNDIMIHMRTKLGVNVSYYKALRAKELVMNSLNGE 300

Query: 301 AAESYSLIPKFFKKLEEMNPGYLT-------------------------FCRLILS---- 360
           A ESY+LIP FF KL+E+NPG  T                         +CR  +S    
Sbjct: 301 AKESYALIPNFFMKLKEINPGSFTAYETDIEGHFKYCFMAIGACIEGWKYCRPNISVDVV 360

Query: 361 --------------------------KNAEHKVIDETNHFLVNLDTRSCTCRVWDLDEIP 420
                                      + E +VID    F+V LD +SCTCRVWDLDEIP
Sbjct: 361 DFETNMRWMESMYPSTRDYLSKVNAINDVEFQVIDGRKQFIVRLDCKSCTCRVWDLDEIP 420

Query: 421 CSHALAAIRALDLNPYTFVSNFYYSNVLTSSYRGLVRPVGNHTSWSSIDVDVSALPPIMK 439
           C+HAL  +R L                         RPVGNH +W SI ++ + LPP  K
Sbjct: 421 CAHALDVLRGL-------------------------RPVGNHANWKSIGIENNILPPTFK 480

BLAST of Sed0019710 vs. ExPASy TrEMBL
Match: A0A5D3DX57 (MuDR family transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold258G00220 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 1.8e-86
Identity = 203/491 (41.34%), Postives = 268/491 (54.58%), Query Frame = 0

Query: 33  LMSFETFSLLILRELKLDVHRSSSKLYVLLGYG--QSTPLFEILEDKDVDWFLTLVKNNG 92
           +MSFE F  LILRE++ D   SS +L +LL YG        +I EDKDV WFL+LVK   
Sbjct: 1   MMSFENFVSLILREVRFDASPSSIQLSILLDYGITDIQTAVQIQEDKDVTWFLSLVKGQI 60

Query: 93  TRHPL----VVDVKDFYLEGTS--SSVVSNSTLLVSSSTVDDNDGDGVPFHVIKDIR--- 152
           TRHPL    +  V +  LE +S   S + N   L+SSS++DD+      F ++ DI    
Sbjct: 61  TRHPLAAHAIAHVSNMDLEWSSVVDSGMDNLCSLLSSSSIDDD------FQILTDIHVSS 120

Query: 153 LDCVFNV--KDTFASKEVLCSCFKYLVVKNNFEFRTPRSSNQAVEFQCCKADCLWNVKAS 212
           L   FN+  KD FASKE+L   F Y+ +KNNFEF+T RS+++++EF+C + +C W V+AS
Sbjct: 121 LSSTFNLKEKDMFASKELLSKSFYYIAIKNNFEFKTVRSNSKSIEFKCSQDNCPWYVRAS 180

Query: 213 SFKDSDLWILK-----------------KQASSILIGDSLKEEFRFGSFKSLTPKEIKVK 272
            +K  +LW L+                 KQASS LI D + ++  F SF   TP +I + 
Sbjct: 181 RYKGGELWQLRKYIANHNCSINVIQTTHKQASSSLISDCIVKD--FSSFDRSTPNDIMIH 240

Query: 273 ARSKLGVSVSYAKAYRAKEHIMKVLKGDAAESYSLIPKFFKKLEEMNPGYLT-------- 332
            R+KLGV+VSY KA+RAKE +M  L G+A ESY+LIP FF KL+E+NPG  T        
Sbjct: 241 MRTKLGVNVSYYKAWRAKELVMNSLNGEAKESYALIPNFFMKLKEINPGSFTAYETDTEG 300

Query: 333 -----------------FCRLILS------------------------------KNAEHK 392
                            +CR  +S                               + E +
Sbjct: 301 HFKYCFMAIGACIEGWKYCRPNISVDVVDFETNMRWMESMYPSIRDYLSKVNAINDVEFQ 360

Query: 393 VIDETNHFLVNLDTRSCTCRVWDLDEIPCSHALAAIRALDLNPYTFVSNFYYSNVLTSSY 439
           VID    F+V LD +SCTCRVWDLDEIPC+HALA +R L                     
Sbjct: 361 VIDGRKQFIVRLDCKSCTCRVWDLDEIPCAHALAVLRGL--------------------- 420

BLAST of Sed0019710 vs. ExPASy TrEMBL
Match: A0A5D3BD68 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1278G00090 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 6.5e-84
Identity = 212/615 (34.47%), Postives = 300/615 (48.78%), Query Frame = 0

Query: 1   MDKILIVVFHGGQWNANGSYEKYKISGVLVDELM-SFETFSLLILRELKLDVHRSSSKLY 60
           M K+ ++VFH GQW+   SY  YK + VLVDE++ SF++F  LI  E++++   S  +L 
Sbjct: 1   MVKLAVIVFHSGQWDEQQSYVDYKTNCVLVDEVISSFDSFVNLIRTEIQVE---SCIELS 60

Query: 61  VLLGYGQST--PLFEILEDKDVDWFLTLVKNNGTRHPLVVDVKDFYLEGTSSSVVSNSTL 120
           VLL  G ++   + +I+E+KDV WFLTLVK+  T++PLV    +  L+ +  S       
Sbjct: 61  VLLPIGSNSVQHVLKIVENKDVTWFLTLVKDQSTQYPLVAHSVNTVLDASVGS------- 120

Query: 121 LVSSSTVDDNDGDGVPFHVIKDI---RLDCVFNVKDTFASKEVLCSCFKYLVVKNNFEFR 180
             SSS V+ + GD +      DI   +    F  KD F SKE+L   F+++ VK+NFEF+
Sbjct: 121 SCSSSIVEVDLGDELVIFRDVDITNSKDGLTFKEKDLFCSKEILLKSFRFIAVKSNFEFK 180

Query: 181 TPRSSNQAVEFQCCKADCLWNVKASSFKDSDLWILK----------------KQASSILI 240
           T RS+++++E +C +  CLW V+AS +K S+LW+++                KQASS  +
Sbjct: 181 TLRSNSRSIELRCNEDGCLWFVRASRYKRSELWMIRKYVSDHSCSMIVHSSHKQASSEFV 240

Query: 241 GDSLKEEFRFGSFKSLTPKEIKVKARSKLGVSVSYAKAYRAKEHIMKVLKGDAAESYSLI 300
              + +  R+ S+   TPK+I    R   GVSVSY KA+RAKE +MK+LKGDA +SY+LI
Sbjct: 241 SHCMIDYLRY-SYSHSTPKDIIHHMRMNYGVSVSYYKAWRAKESVMKLLKGDADDSYALI 300

Query: 301 PKFFKKLEEMNPGYLT-------------------------FCR---------------- 360
           PKFF KL+E+NPG  T                         +CR                
Sbjct: 301 PKFFSKLKEINPGSFTAYEIDPNGHFKYCFMAIASSIEGWRYCRPNIAVDGTFLKCKYGG 360

Query: 361 ------------------------------------------------------------ 420
                                                                       
Sbjct: 361 TLLTAATMDDDFELYMRWMESIYPSIRGYLMKVGFERWSRAYSRKRRYQIMTTNICESLN 420

Query: 421 -------------------------------------LILSKNAE---HKVIDETNHFLV 434
                                                 +LS  AE    K++DE+  F+V
Sbjct: 421 SKLKIDRDLPVASLLEAIREFLQRWFYERRKAASCLKSVLSSWAEGLIRKLVDESRSFIV 480

BLAST of Sed0019710 vs. TAIR 10
Match: AT1G64260.1 (MuDR family transposase )

HSP 1 Score: 52.0 bits (123), Expect = 1.4e-06
Identity = 30/102 (29.41%), Postives = 47/102 (46.08%), Query Frame = 0

Query: 281 FFKKLEEMNPGYLTFCRLILSKNAEHKVID--ETNHFLVNLDTRSCTCRVWDLDEIPCSH 340
           F  KLEE     + +    L +++  KV +  E   ++V L+  +CTCR +   + PC H
Sbjct: 599 FMDKLEEFMTDSIPYVITQLERDS-FKVSESSEKEEWIVQLNVSTCTCRKFQSYKFPCLH 658

Query: 341 ALAAIRALDLNPYTFVSNFYYSNVLTSSYRGLVRPVGNHTSW 381
           ALA    L +NP  +V   Y       +Y     PV +  +W
Sbjct: 659 ALAVFEKLKINPLQYVDECYTVEQYCKTYAATFSPVPDVAAW 699

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYK00436.11.6e-9742.45uncharacterized protein E5676_scaffold169G00400 [Cucumis melo var. makuwa] >TYK0... [more]
TYK22454.14.5e-9541.11uncharacterized protein E5676_scaffold3009G00020 [Cucumis melo var. makuwa][more]
KAA0054854.13.5e-9240.34uncharacterized protein E6C27_scaffold406G00610 [Cucumis melo var. makuwa][more]
XP_038907134.13.4e-8733.14uncharacterized protein LOC120092945 [Benincasa hispida][more]
TYK28211.13.8e-8641.34MuDR family transposase [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3C8T87.9e-9842.45SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A5D3DFS52.2e-9541.11SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A5A7UI691.7e-9240.34SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6... [more]
A0A5D3DX571.8e-8641.34MuDR family transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3BD686.5e-8434.47SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
Match NameE-valueIdentityDescription
AT1G64260.11.4e-0629.41MuDR family transposase [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006564Zinc finger, PMZ-typeSMARTSM0057526again6coord: 322..349
e-value: 2.0E-10
score: 50.6
IPR007527Zinc finger, SWIM-typePFAMPF04434SWIMcoord: 315..346
e-value: 7.5E-9
score: 35.1
IPR007527Zinc finger, SWIM-typePROSITEPS50966ZF_SWIMcoord: 315..347
score: 10.76882
NoneNo IPR availablePANTHERPTHR31973:SF106OS09G0268600 PROTEINcoord: 167..293
NoneNo IPR availablePANTHERPTHR31973POLYPROTEIN, PUTATIVE-RELATEDcoord: 305..432
NoneNo IPR availablePANTHERPTHR31973POLYPROTEIN, PUTATIVE-RELATEDcoord: 167..293
NoneNo IPR availablePANTHERPTHR31973:SF106OS09G0268600 PROTEINcoord: 305..432

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0019710.1Sed0019710.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding